Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64763.t1 | XP_003612165.1 | 92.4 | 291 | 20 | 2 | 1 | 291 | 1 | 289 | 1.30E-124 | 456.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64763.t1 | G7JW75 | 92.4 | 291 | 20 | 2 | 1 | 291 | 1 | 289 | 9.0e-125 | 456.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene64763 | 0.856908 | 2.34E-62 | -1.69E-46 |
| MS.gene050297 | MS.gene64763 | 0.828876 | 7.04E-55 | -1.69E-46 |
| MS.gene050310 | MS.gene64763 | 0.850205 | 1.97E-60 | -1.69E-46 |
| MS.gene050648 | MS.gene64763 | 0.808666 | 2.77E-50 | -1.69E-46 |
| MS.gene050901 | MS.gene64763 | 0.804045 | 2.61E-49 | -1.69E-46 |
| MS.gene051018 | MS.gene64763 | 0.835274 | 1.85E-56 | -1.69E-46 |
| MS.gene051067 | MS.gene64763 | 0.818281 | 2.13E-52 | -1.69E-46 |
| MS.gene051263 | MS.gene64763 | 0.805218 | 1.48E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene64763 | 0.821421 | 4.07E-53 | -1.69E-46 |
| MS.gene05157 | MS.gene64763 | 0.811639 | 6.33E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene64763 | 0.802968 | 4.36E-49 | -1.69E-46 |
| MS.gene051660 | MS.gene64763 | 0.80192 | 7.17E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene64763 | 0.801815 | 7.54E-49 | -1.69E-46 |
| MS.gene052104 | MS.gene64763 | 0.81425 | 1.69E-51 | -1.69E-46 |
| MS.gene052732 | MS.gene64763 | 0.807162 | 5.78E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene64763 | 0.810691 | 1.02E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene64763 | 0.85196 | 6.31E-61 | -1.69E-46 |
| MS.gene053171 | MS.gene64763 | 0.843882 | 1.07E-58 | -1.69E-46 |
| MS.gene053536 | MS.gene64763 | 0.821127 | 4.76E-53 | -1.69E-46 |
| MS.gene053538 | MS.gene64763 | 0.816622 | 5.03E-52 | -1.69E-46 |
| MS.gene054584 | MS.gene64763 | 0.856657 | 2.77E-62 | -1.69E-46 |
| MS.gene055537 | MS.gene64763 | 0.837928 | 3.89E-57 | -1.69E-46 |
| MS.gene055764 | MS.gene64763 | 0.807787 | 4.26E-50 | -1.69E-46 |
| MS.gene056169 | MS.gene64763 | 0.867608 | 1.21E-65 | -1.69E-46 |
| MS.gene056228 | MS.gene64763 | 0.815489 | 9.01E-52 | -1.69E-46 |
| MS.gene057004 | MS.gene64763 | 0.858901 | 5.99E-63 | -1.69E-46 |
| MS.gene057082 | MS.gene64763 | 0.851745 | 7.26E-61 | -1.69E-46 |
| MS.gene057294 | MS.gene64763 | 0.800398 | 1.47E-48 | -1.69E-46 |
| MS.gene058197 | MS.gene64763 | 0.854998 | 8.47E-62 | -1.69E-46 |
| MS.gene058198 | MS.gene64763 | 0.85276 | 3.74E-61 | -1.69E-46 |
| MS.gene058649 | MS.gene64763 | 0.811207 | 7.86E-51 | -1.69E-46 |
| MS.gene058668 | MS.gene64763 | 0.811024 | 8.61E-51 | -1.69E-46 |
| MS.gene05894 | MS.gene64763 | 0.822338 | 2.50E-53 | -1.69E-46 |
| MS.gene059300 | MS.gene64763 | 0.858216 | 9.59E-63 | -1.69E-46 |
| MS.gene059424 | MS.gene64763 | 0.815966 | 7.05E-52 | -1.69E-46 |
| MS.gene059778 | MS.gene64763 | 0.80666 | 7.39E-50 | -1.69E-46 |
| MS.gene06057 | MS.gene64763 | 0.847082 | 1.45E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64763.t1 | MTR_5g022010 | 91.409 | 291 | 23 | 2 | 1 | 291 | 1 | 289 | 8.70e-178 | 492 |
| MS.gene64763.t1 | MTR_8g075950 | 50.286 | 350 | 99 | 14 | 1 | 286 | 1 | 339 | 2.27e-71 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64763.t1 | AT5G66230 | 39.481 | 347 | 129 | 14 | 1 | 284 | 1 | 329 | 6.87e-45 | 155 |
| MS.gene64763.t1 | AT5G66230 | 39.130 | 345 | 129 | 14 | 3 | 284 | 219 | 545 | 1.39e-41 | 150 |
| MS.gene64763.t1 | AT3G51230 | 44.954 | 109 | 39 | 3 | 1 | 91 | 1 | 106 | 9.15e-18 | 79.7 |
Find 60 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCAAATTCAGAGTCTTTC+TGG | 0.117151 | 5.2:-13188580 | MS.gene64763:CDS |
| AAACGAAGATGTTTCCCTTT+TGG | 0.292026 | 5.2:+13187542 | None:intergenic |
| TCACCAATTGTGGGTCTTGC+TGG | 0.314090 | 5.2:-13188730 | MS.gene64763:CDS |
| GTGAGAGTTGTTGTGGATGA+TGG | 0.320301 | 5.2:+13189008 | None:intergenic |
| ATGATGGCAGGTGGTGAAAA+TGG | 0.338531 | 5.2:-13188014 | MS.gene64763:intron |
| TCAAGATCGATGTGCATTGA+TGG | 0.354068 | 5.2:-13188767 | MS.gene64763:CDS |
| CTCTGAGAAGTCAAGGGACT+TGG | 0.360313 | 5.2:+13187955 | None:intergenic |
| CCAGAAAGACTCTGAATTTG+AGG | 0.370802 | 5.2:+13188580 | None:intergenic |
| TAGATGAAGATGCTTCTATC+TGG | 0.397277 | 5.2:-13187865 | MS.gene64763:CDS |
| CTTCTTCAACCATCTGCATA+AGG | 0.410420 | 5.2:+13188611 | None:intergenic |
| ACCTAATGTGTTGCATTTGA+AGG | 0.412380 | 5.2:-13187576 | MS.gene64763:CDS |
| AAGGTGGTTCCAAAATTTGC+TGG | 0.416494 | 5.2:-13187677 | MS.gene64763:CDS |
| TCAACAACAATCAATTTCTC+AGG | 0.428450 | 5.2:-13188530 | MS.gene64763:intron |
| TGAGAGTTGTTGTGGATGAT+GGG | 0.430806 | 5.2:+13189009 | None:intergenic |
| AAGGGATTACCAACACCAAA+AGG | 0.433129 | 5.2:-13187557 | MS.gene64763:CDS |
| CCCTTCAAATGCAACACATT+AGG | 0.434003 | 5.2:+13187575 | None:intergenic |
| GACAAATGATTCACCAATTG+TGG | 0.435186 | 5.2:-13188740 | MS.gene64763:CDS |
| TTCTTCAACCATCTGCATAA+GGG | 0.467939 | 5.2:+13188612 | None:intergenic |
| AGCAAAGCTTCACCAGATCC+TGG | 0.479015 | 5.2:+13188652 | None:intergenic |
| CCACCAGCAAGACCCACAAT+TGG | 0.497063 | 5.2:+13188727 | None:intergenic |
| GTGAAGAACACACCAGGATC+TGG | 0.501240 | 5.2:-13188664 | MS.gene64763:CDS |
| CCTAATGTGTTGCATTTGAA+GGG | 0.505604 | 5.2:-13187575 | MS.gene64763:CDS |
| GAGATTTCTCTGAGAAGTCA+AGG | 0.515939 | 5.2:+13187948 | None:intergenic |
| TATGCAGATGGTTGAAGAAG+AGG | 0.527703 | 5.2:-13188608 | MS.gene64763:CDS |
| GTGACAGAAGGAAGTGTGGT+TGG | 0.552956 | 5.2:-13187899 | MS.gene64763:CDS |
| ATCTGGTGAAGCTTTGCTGA+GGG | 0.555103 | 5.2:-13188647 | MS.gene64763:CDS |
| GAGAGTTGTTGTGGATGATG+GGG | 0.555778 | 5.2:+13189010 | None:intergenic |
| CAACATTAGAGTGAATGAAA+AGG | 0.556085 | 5.2:-13187696 | MS.gene64763:CDS |
| CTTGTGAATGAAGTGGAGGA+TGG | 0.558010 | 5.2:-13187617 | MS.gene64763:CDS |
| AGATTTCTCTGAGAAGTCAA+GGG | 0.560895 | 5.2:+13187949 | None:intergenic |
| GGTGTTGGTGAGAGTTGTTG+TGG | 0.563322 | 5.2:+13189001 | None:intergenic |
| CTACCTCTTTGTTTCGCAGA+CGG | 0.567782 | 5.2:+13188691 | None:intergenic |
| CCAATTGTGGGTCTTGCTGG+TGG | 0.574159 | 5.2:-13188727 | MS.gene64763:CDS |
| TTTCATATTCACAGCTACCT+TGG | 0.574412 | 5.2:+13187990 | None:intergenic |
| AGATTCTGTGTCAAAACCAA+AGG | 0.578361 | 5.2:-13188800 | MS.gene64763:CDS |
| AGGGATTACCAACACCAAAA+GGG | 0.583936 | 5.2:-13187556 | MS.gene64763:CDS |
| TGATGAACTTGTGAATGAAG+TGG | 0.585794 | 5.2:-13187624 | MS.gene64763:CDS |
| GATTCTGTGTCAAAACCAAA+GGG | 0.587494 | 5.2:-13188799 | MS.gene64763:CDS |
| ACAAATGATTCACCAATTGT+GGG | 0.597784 | 5.2:-13188739 | MS.gene64763:CDS |
| CAACAATGATGAAGATGATG+TGG | 0.602585 | 5.2:-13187822 | MS.gene64763:CDS |
| GGCTTGATGAACTGTGTGAA+GGG | 0.604878 | 5.2:-13187724 | MS.gene64763:CDS |
| AGTGAAGACCCTTATGCAGA+TGG | 0.608040 | 5.2:-13188620 | MS.gene64763:CDS |
| TGTGGAGGAAGAAATAGCTG+AGG | 0.610254 | 5.2:-13187804 | MS.gene64763:CDS |
| CATTAGAGTGAATGAAAAGG+TGG | 0.614379 | 5.2:-13187693 | MS.gene64763:CDS |
| TGCACCTCTGAGGTGACAGA+AGG | 0.618247 | 5.2:-13187911 | MS.gene64763:CDS |
| TTACTGACTTGAAAGTGGAA+TGG | 0.620132 | 5.2:+13188980 | None:intergenic |
| ATCCTGGTGTGTTCTTCACA+CGG | 0.624024 | 5.2:+13188668 | None:intergenic |
| CAATGATGAAGATGATGTGG+AGG | 0.630227 | 5.2:-13187819 | MS.gene64763:CDS |
| ACTTCCTTCTGTCACCTCAG+AGG | 0.635704 | 5.2:+13187907 | None:intergenic |
| ACGCCGTCTGCGAAACAAAG+AGG | 0.639141 | 5.2:-13188694 | MS.gene64763:CDS |
| ACTTGAAAGTGGAATGGTGT+TGG | 0.644715 | 5.2:+13188986 | None:intergenic |
| GATCTGGTGAAGCTTTGCTG+AGG | 0.645257 | 5.2:-13188648 | MS.gene64763:CDS |
| GGGCTTGATGAACTGTGTGA+AGG | 0.655575 | 5.2:-13187725 | MS.gene64763:CDS |
| AGCCGTGTGAAGAACACACC+AGG | 0.662563 | 5.2:-13188670 | MS.gene64763:CDS |
| ATCAGAAGAATGCACCTCTG+AGG | 0.671388 | 5.2:-13187921 | MS.gene64763:CDS |
| TCTGGTGAAGCTTTGCTGAG+GGG | 0.673835 | 5.2:-13188646 | MS.gene64763:CDS |
| AATTTGCTGGAAAACACACA+AGG | 0.675885 | 5.2:-13187664 | MS.gene64763:CDS |
| TGAACTTGTGAATGAAGTGG+AGG | 0.693057 | 5.2:-13187621 | MS.gene64763:CDS |
| TGAGGTGACAGAAGGAAGTG+TGG | 0.713802 | 5.2:-13187903 | MS.gene64763:CDS |
| CAGGTGGTGAAAATGGACCA+AGG | 0.731969 | 5.2:-13188007 | MS.gene64763:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGAAAAAAATTATGAA+GGG | - | chr5.2:13188777-13188796 | MS.gene64763:CDS | 10.0% |
| !!! | TTATATTTTTCTGAAATTTT+AGG | - | chr5.2:13188186-13188205 | MS.gene64763:intron | 10.0% |
| !! | ACTTTATAGATTATATATCT+AGG | + | chr5.2:13188339-13188358 | None:intergenic | 15.0% |
| !! | GAAAAAGAAAAAAATTATGA+AGG | - | chr5.2:13188776-13188795 | MS.gene64763:CDS | 15.0% |
| !!! | ATTTTTTTCAAGATGTTTAT+AGG | + | chr5.2:13187627-13187646 | None:intergenic | 15.0% |
| !! | AAACATCTTGAAAAAAATTC+TGG | - | chr5.2:13187629-13187648 | MS.gene64763:CDS | 20.0% |
| !! | AACATCTTGAAAAAAATTCT+GGG | - | chr5.2:13187630-13187649 | MS.gene64763:CDS | 20.0% |
| !! | ATAAGATCTCAATTTAATGA+TGG | - | chr5.2:13188492-13188511 | MS.gene64763:intron | 20.0% |
| !! | TTTGAAAAAAAATGGAGATT+TGG | - | chr5.2:13188313-13188332 | MS.gene64763:intron | 20.0% |
| !!! | CAATTGCTTTTGAAAAAAAA+TGG | - | chr5.2:13188305-13188324 | MS.gene64763:intron | 20.0% |
| !!! | CATGCAAAATTATACTTTTA+TGG | - | chr5.2:13187583-13187602 | MS.gene64763:CDS | 20.0% |
| !!! | TCTTGTTTTTTTTTTTTTGC+AGG | - | chr5.2:13187690-13187709 | MS.gene64763:CDS | 20.0% |
| !!! | TTATTTCATGCATTTTTCTT+TGG | + | chr5.2:13188036-13188055 | None:intergenic | 20.0% |
| ! | ACATGTGAGTTTCAATAAAA+TGG | + | chr5.2:13188132-13188151 | None:intergenic | 25.0% |
| ! | CACTTAATGAACTATTTATG+TGG | - | chr5.2:13188371-13188390 | MS.gene64763:intron | 25.0% |
| ! | CATAAATAGTTCATTAAGTG+AGG | + | chr5.2:13188371-13188390 | None:intergenic | 25.0% |
| ! | CATGTGAGTTTCAATAAAAT+GGG | + | chr5.2:13188131-13188150 | None:intergenic | 25.0% |
| !!! | GCAAGTCTTTTTAATTAGTT+TGG | - | chr5.2:13188104-13188123 | MS.gene64763:intron | 25.0% |
| !!! | TTTTTTTACTGACTTGAAAG+TGG | + | chr5.2:13187550-13187569 | None:intergenic | 25.0% |
| AACATAAAGATTTCACCTAC+TGG | + | chr5.2:13188164-13188183 | None:intergenic | 30.0% | |
| ACAAATGATTCACCAATTGT+GGG | - | chr5.2:13187783-13187802 | MS.gene64763:CDS | 30.0% | |
| CAACATTAGAGTGAATGAAA+AGG | - | chr5.2:13188826-13188845 | MS.gene64763:intron | 30.0% | |
| TCAACAACAATCAATTTCTC+AGG | - | chr5.2:13187992-13188011 | MS.gene64763:CDS | 30.0% | |
| ! | AGTGATTGTATAAAGTGTCT+TGG | - | chr5.2:13188432-13188451 | MS.gene64763:intron | 30.0% |
| ! | CATGCATTTTTCTTTGGTTA+GGG | + | chr5.2:13188030-13188049 | None:intergenic | 30.0% |
| ! | TCATGCATTTTTCTTTGGTT+AGG | + | chr5.2:13188031-13188050 | None:intergenic | 30.0% |
| ACCTAATGTGTTGCATTTGA+AGG | - | chr5.2:13188946-13188965 | MS.gene64763:intron | 35.0% | |
| AGATTCTGTGTCAAAACCAA+AGG | - | chr5.2:13187722-13187741 | MS.gene64763:CDS | 35.0% | |
| CAACAATGATGAAGATGATG+TGG | - | chr5.2:13188700-13188719 | MS.gene64763:CDS | 35.0% | |
| CATTAGAGTGAATGAAAAGG+TGG | - | chr5.2:13188829-13188848 | MS.gene64763:intron | 35.0% | |
| CCTAATGTGTTGCATTTGAA+GGG | - | chr5.2:13188947-13188966 | MS.gene64763:intron | 35.0% | |
| GACAAATGATTCACCAATTG+TGG | - | chr5.2:13187782-13187801 | MS.gene64763:CDS | 35.0% | |
| GATCTCAATTTAATGATGGC+AGG | - | chr5.2:13188496-13188515 | MS.gene64763:intron | 35.0% | |
| GATTCTGTGTCAAAACCAAA+GGG | - | chr5.2:13187723-13187742 | MS.gene64763:CDS | 35.0% | |
| TAGATGAAGATGCTTCTATC+TGG | - | chr5.2:13188657-13188676 | MS.gene64763:CDS | 35.0% | |
| TGATGAACTTGTGAATGAAG+TGG | - | chr5.2:13188898-13188917 | MS.gene64763:intron | 35.0% | |
| TTCTTCAACCATCTGCATAA+GGG | + | chr5.2:13187913-13187932 | None:intergenic | 35.0% | |
| TTTCATATTCACAGCTACCT+TGG | + | chr5.2:13188535-13188554 | None:intergenic | 35.0% | |
| ! | AAACGAAGATGTTTCCCTTT+TGG | + | chr5.2:13188983-13189002 | None:intergenic | 35.0% |
| ! | AGATTTCTCTGAGAAGTCAA+GGG | + | chr5.2:13188576-13188595 | None:intergenic | 35.0% |
| ! | GTGTGTTTTCCAGCAAATTT+TGG | + | chr5.2:13188857-13188876 | None:intergenic | 35.0% |
| ! | TCTTGATTTTGTTGACCCTT+TGG | + | chr5.2:13187741-13187760 | None:intergenic | 35.0% |
| ! | TGTCTTGGTAGCATAATTTG+TGG | - | chr5.2:13188447-13188466 | MS.gene64763:intron | 35.0% |
| !! | AATTTGCTGGAAAACACACA+AGG | - | chr5.2:13188858-13188877 | MS.gene64763:intron | 35.0% |
| !! | GAAACATCTTCGTTTTTCTG+AGG | - | chr5.2:13188988-13189007 | MS.gene64763:CDS | 35.0% |
| !! | TTACTGACTTGAAAGTGGAA+TGG | + | chr5.2:13187545-13187564 | None:intergenic | 35.0% |
| AAGGGATTACCAACACCAAA+AGG | - | chr5.2:13188965-13188984 | MS.gene64763:intron | 40.0% | |
| AAGGTGGTTCCAAAATTTGC+TGG | - | chr5.2:13188845-13188864 | MS.gene64763:intron | 40.0% | |
| ACATGTTCTTTGTCACCAGT+AGG | - | chr5.2:13188146-13188165 | MS.gene64763:intron | 40.0% | |
| ACTTGAAAGTGGAATGGTGT+TGG | + | chr5.2:13187539-13187558 | None:intergenic | 40.0% | |
| AGGGATTACCAACACCAAAA+GGG | - | chr5.2:13188966-13188985 | MS.gene64763:intron | 40.0% | |
| CAATGATGAAGATGATGTGG+AGG | - | chr5.2:13188703-13188722 | MS.gene64763:CDS | 40.0% | |
| CCAGAAAGACTCTGAATTTG+AGG | + | chr5.2:13187945-13187964 | None:intergenic | 40.0% | |
| CCCTTCAAATGCAACACATT+AGG | + | chr5.2:13188950-13188969 | None:intergenic | 40.0% | |
| CCTCAAATTCAGAGTCTTTC+TGG | - | chr5.2:13187942-13187961 | MS.gene64763:CDS | 40.0% | |
| CTCAATTTAATGATGGCAGG+TGG | - | chr5.2:13188499-13188518 | MS.gene64763:intron | 40.0% | |
| CTTCTTCAACCATCTGCATA+AGG | + | chr5.2:13187914-13187933 | None:intergenic | 40.0% | |
| TATGCAGATGGTTGAAGAAG+AGG | - | chr5.2:13187914-13187933 | MS.gene64763:CDS | 40.0% | |
| TCAAGATCGATGTGCATTGA+TGG | - | chr5.2:13187755-13187774 | MS.gene64763:CDS | 40.0% | |
| TGAACTTGTGAATGAAGTGG+AGG | - | chr5.2:13188901-13188920 | MS.gene64763:intron | 40.0% | |
| TGAGAGTTGTTGTGGATGAT+GGG | + | chr5.2:13187516-13187535 | None:intergenic | 40.0% | |
| ! | GAGATTTCTCTGAGAAGTCA+AGG | + | chr5.2:13188577-13188596 | None:intergenic | 40.0% |
| !! | ACATCTTCGTTTTTCTGAGG+AGG | - | chr5.2:13188991-13189010 | MS.gene64763:CDS | 40.0% |
| !! | AGATGTTTCCCTTTTGGTGT+TGG | + | chr5.2:13188977-13188996 | None:intergenic | 40.0% |
| AGTGAAGACCCTTATGCAGA+TGG | - | chr5.2:13187902-13187921 | MS.gene64763:CDS | 45.0% | |
| ATCAGAAGAATGCACCTCTG+AGG | - | chr5.2:13188601-13188620 | MS.gene64763:CDS | 45.0% | |
| ATCCTGGTGTGTTCTTCACA+CGG | + | chr5.2:13187857-13187876 | None:intergenic | 45.0% | |
| ATCTGGTGAAGCTTTGCTGA+GGG | - | chr5.2:13187875-13187894 | MS.gene64763:CDS | 45.0% | |
| ATGATGGCAGGTGGTGAAAA+TGG | - | chr5.2:13188508-13188527 | MS.gene64763:intron | 45.0% | |
| CTTGTGAATGAAGTGGAGGA+TGG | - | chr5.2:13188905-13188924 | MS.gene64763:intron | 45.0% | |
| GAGAGTTGTTGTGGATGATG+GGG | + | chr5.2:13187515-13187534 | None:intergenic | 45.0% | |
| GGCTTGATGAACTGTGTGAA+GGG | - | chr5.2:13188798-13188817 | MS.gene64763:CDS | 45.0% | |
| GTGAGAGTTGTTGTGGATGA+TGG | + | chr5.2:13187517-13187536 | None:intergenic | 45.0% | |
| TGTGGAGGAAGAAATAGCTG+AGG | - | chr5.2:13188718-13188737 | MS.gene64763:CDS | 45.0% | |
| ! | CTACCTCTTTGTTTCGCAGA+CGG | + | chr5.2:13187834-13187853 | None:intergenic | 45.0% |
| !! | TCGTTTTTCTGAGGAGGAAG+AGG | - | chr5.2:13188997-13189016 | MS.gene64763:CDS | 45.0% |
| !! | TTTTCTGAGGAGGAAGAGGA+AGG | - | chr5.2:13189001-13189020 | MS.gene64763:CDS | 45.0% |
| ACTTCCTTCTGTCACCTCAG+AGG | + | chr5.2:13188618-13188637 | None:intergenic | 50.0% | |
| AGCAAAGCTTCACCAGATCC+TGG | + | chr5.2:13187873-13187892 | None:intergenic | 50.0% | |
| CAGGTGGTGAAAATGGACCA+AGG | - | chr5.2:13188515-13188534 | MS.gene64763:intron | 50.0% | |
| GATCTGGTGAAGCTTTGCTG+AGG | - | chr5.2:13187874-13187893 | MS.gene64763:CDS | 50.0% | |
| GGGCTTGATGAACTGTGTGA+AGG | - | chr5.2:13188797-13188816 | MS.gene64763:CDS | 50.0% | |
| GTGAAGAACACACCAGGATC+TGG | - | chr5.2:13187858-13187877 | MS.gene64763:CDS | 50.0% | |
| TCACCAATTGTGGGTCTTGC+TGG | - | chr5.2:13187792-13187811 | MS.gene64763:CDS | 50.0% | |
| TCTGGTGAAGCTTTGCTGAG+GGG | - | chr5.2:13187876-13187895 | MS.gene64763:CDS | 50.0% | |
| TGAGGTGACAGAAGGAAGTG+TGG | - | chr5.2:13188619-13188638 | MS.gene64763:CDS | 50.0% | |
| ! | CTCTGAGAAGTCAAGGGACT+TGG | + | chr5.2:13188570-13188589 | None:intergenic | 50.0% |
| ! | GTGACAGAAGGAAGTGTGGT+TGG | - | chr5.2:13188623-13188642 | MS.gene64763:CDS | 50.0% |
| !! | GGTGTTGGTGAGAGTTGTTG+TGG | + | chr5.2:13187524-13187543 | None:intergenic | 50.0% |
| ACGCCGTCTGCGAAACAAAG+AGG | - | chr5.2:13187828-13187847 | MS.gene64763:CDS | 55.0% | |
| AGCCGTGTGAAGAACACACC+AGG | - | chr5.2:13187852-13187871 | MS.gene64763:CDS | 55.0% | |
| CCAATTGTGGGTCTTGCTGG+TGG | - | chr5.2:13187795-13187814 | MS.gene64763:CDS | 55.0% | |
| CCACCAGCAAGACCCACAAT+TGG | + | chr5.2:13187798-13187817 | None:intergenic | 55.0% | |
| !! | TGCACCTCTGAGGTGACAGA+AGG | - | chr5.2:13188611-13188630 | MS.gene64763:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 13187505 | 13189039 | 13187505 | ID=MS.gene64763 |
| chr5.2 | mRNA | 13187505 | 13189039 | 13187505 | ID=MS.gene64763.t1;Parent=MS.gene64763 |
| chr5.2 | exon | 13188988 | 13189039 | 13188988 | ID=MS.gene64763.t1.exon1;Parent=MS.gene64763.t1 |
| chr5.2 | CDS | 13188988 | 13189039 | 13188988 | ID=cds.MS.gene64763.t1;Parent=MS.gene64763.t1 |
| chr5.2 | exon | 13188531 | 13188832 | 13188531 | ID=MS.gene64763.t1.exon2;Parent=MS.gene64763.t1 |
| chr5.2 | CDS | 13188531 | 13188832 | 13188531 | ID=cds.MS.gene64763.t1;Parent=MS.gene64763.t1 |
| chr5.2 | exon | 13187505 | 13188026 | 13187505 | ID=MS.gene64763.t1.exon3;Parent=MS.gene64763.t1 |
| chr5.2 | CDS | 13187505 | 13188026 | 13187505 | ID=cds.MS.gene64763.t1;Parent=MS.gene64763.t1 |
| Gene Sequence |
| Protein sequence |
