Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65833.t1 | XP_003598672.1 | 93.2 | 191 | 13 | 0 | 1 | 191 | 1 | 191 | 3.60E-96 | 360.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65833.t1 | Q9LK88 | 69.0 | 187 | 58 | 0 | 4 | 190 | 10 | 196 | 9.0e-72 | 271.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65833.t1 | G7IW34 | 93.2 | 191 | 13 | 0 | 1 | 191 | 1 | 191 | 2.6e-96 | 360.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene65833 | 0.836946 | 6.94E-57 | -1.69E-46 |
| MS.gene050095 | MS.gene65833 | 0.802985 | 4.33E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene65833 | 0.804597 | 2.00E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene65833 | 0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene052211 | MS.gene65833 | 0.83252 | 9.02E-56 | -1.69E-46 |
| MS.gene05240 | MS.gene65833 | 0.82088 | 5.43E-53 | -1.69E-46 |
| MS.gene053033 | MS.gene65833 | 0.804694 | 1.91E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene65833 | 0.814031 | 1.89E-51 | -1.69E-46 |
| MS.gene053488 | MS.gene65833 | 0.805864 | 1.09E-49 | -1.69E-46 |
| MS.gene053887 | MS.gene65833 | 0.809431 | 1.90E-50 | -1.69E-46 |
| MS.gene054146 | MS.gene65833 | 0.860242 | 2.37E-63 | -1.69E-46 |
| MS.gene054147 | MS.gene65833 | 0.81562 | 8.42E-52 | -1.69E-46 |
| MS.gene054277 | MS.gene65833 | 0.820528 | 6.54E-53 | -1.69E-46 |
| MS.gene054290 | MS.gene65833 | 0.801573 | 8.45E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene65833 | 0.807176 | 5.74E-50 | -1.69E-46 |
| MS.gene055240 | MS.gene65833 | 0.821113 | 4.80E-53 | -1.69E-46 |
| MS.gene056076 | MS.gene65833 | 0.809983 | 1.44E-50 | -1.69E-46 |
| MS.gene056748 | MS.gene65833 | 0.814595 | 1.42E-51 | -1.69E-46 |
| MS.gene056920 | MS.gene65833 | 0.806863 | 6.69E-50 | -1.69E-46 |
| MS.gene057544 | MS.gene65833 | 0.814366 | 1.60E-51 | -1.69E-46 |
| MS.gene057547 | MS.gene65833 | 0.822866 | 1.88E-53 | -1.69E-46 |
| MS.gene058603 | MS.gene65833 | 0.814298 | 1.65E-51 | -1.69E-46 |
| MS.gene059060 | MS.gene65833 | 0.803112 | 4.07E-49 | -1.69E-46 |
| MS.gene059953 | MS.gene65833 | 0.823398 | 1.41E-53 | -1.69E-46 |
| MS.gene059955 | MS.gene65833 | 0.830302 | 3.17E-55 | -1.69E-46 |
| MS.gene060087 | MS.gene65833 | 0.819952 | 8.87E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65833.t1 | MTR_3g019090 | 93.194 | 191 | 13 | 0 | 1 | 191 | 1 | 191 | 1.72e-133 | 372 |
| MS.gene65833.t1 | MTR_3g019160 | 76.440 | 191 | 45 | 0 | 1 | 191 | 1 | 191 | 6.40e-108 | 307 |
| MS.gene65833.t1 | MTR_3g019120 | 77.320 | 194 | 37 | 2 | 1 | 189 | 1 | 192 | 4.19e-105 | 307 |
| MS.gene65833.t1 | MTR_3g019120 | 77.320 | 194 | 37 | 2 | 1 | 189 | 1 | 192 | 1.17e-103 | 307 |
| MS.gene65833.t1 | MTR_3g019150 | 72.251 | 191 | 52 | 1 | 1 | 191 | 1 | 190 | 1.37e-102 | 293 |
| MS.gene65833.t1 | MTR_8g039090 | 69.474 | 190 | 58 | 0 | 2 | 191 | 3 | 192 | 2.54e-101 | 290 |
| MS.gene65833.t1 | MTR_3g019090 | 95.070 | 142 | 7 | 0 | 50 | 191 | 1 | 142 | 1.28e-99 | 284 |
| MS.gene65833.t1 | MTR_3g019120 | 83.784 | 148 | 24 | 0 | 42 | 189 | 5 | 152 | 5.75e-88 | 266 |
| MS.gene65833.t1 | MTR_3g019150 | 71.287 | 101 | 29 | 0 | 91 | 191 | 34 | 134 | 6.55e-51 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65833.t1 | AT3G27890 | 68.984 | 187 | 58 | 0 | 4 | 190 | 10 | 196 | 7.60e-92 | 266 |
Find 42 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCTGCCTTGAAGTTTA+AGG | 0.117582 | 3.2:+9572227 | None:intergenic |
| AATCGACTATATTGATATTT+CGG | 0.315855 | 3.2:-9572751 | MS.gene65833:CDS |
| AAATATCAATATAGTCGATT+TGG | 0.331349 | 3.2:+9572754 | None:intergenic |
| ATTTCTGCCTTGAAGTTTAA+GGG | 0.343293 | 3.2:+9572228 | None:intergenic |
| AACATCATCTTCGCCAAATC+GGG | 0.347815 | 3.2:-9572399 | MS.gene65833:CDS |
| CATACTGGCCTCATTCGTTA+TGG | 0.349761 | 3.2:-9573349 | MS.gene65833:intron |
| CGCTAAAGAATGCGATTGAT+TGG | 0.357043 | 3.2:-9572504 | MS.gene65833:CDS |
| GGTTTACCAGCCCATGCATT+TGG | 0.360432 | 3.2:+9572469 | None:intergenic |
| ATTAAGATTGTTGCTCTCTC+TGG | 0.362873 | 3.2:-9573394 | MS.gene65833:CDS |
| CAACATCATCTTCGCCAAAT+CGG | 0.377634 | 3.2:-9572400 | MS.gene65833:CDS |
| GGCTCCTCCAACACTTACTA+TGG | 0.391189 | 3.2:+9572441 | None:intergenic |
| TATCAAGGAAAACCCCGATT+TGG | 0.397239 | 3.2:+9572386 | None:intergenic |
| CTGGATGCTTAAATACATCT+AGG | 0.405336 | 3.2:+9572335 | None:intergenic |
| CGAAAAGCTTCAACTTCAGC+TGG | 0.413282 | 3.2:+9572684 | None:intergenic |
| GAGACAGAATAATTATATTC+AGG | 0.417383 | 3.2:+9572621 | None:intergenic |
| GTAAGTGTTGGAGGAGCCTT+TGG | 0.428342 | 3.2:-9572436 | MS.gene65833:CDS |
| TTTAAGGGTAAATTCCTTCA+AGG | 0.429920 | 3.2:+9572243 | None:intergenic |
| TGAAGAGATCAAGAATAGAT+TGG | 0.437949 | 3.2:-9572281 | MS.gene65833:CDS |
| GAATATAATTATTCTGTCTC+AGG | 0.442769 | 3.2:-9572618 | MS.gene65833:intron |
| GAAAGTTCTTGTGTCCTTGA+AGG | 0.447891 | 3.2:-9572257 | MS.gene65833:CDS |
| TATTAATGAAATGAATATCA+AGG | 0.449069 | 3.2:+9572371 | None:intergenic |
| GCTAAAGAATGCGATTGATT+GGG | 0.485585 | 3.2:-9572503 | MS.gene65833:CDS |
| GAATTTACCCTTAAACTTCA+AGG | 0.490730 | 3.2:-9572235 | MS.gene65833:CDS |
| TTACCAGCCCATGCATTTGG+TGG | 0.503471 | 3.2:+9572472 | None:intergenic |
| AACTCTGATCTTGAGAAAGA+AGG | 0.504804 | 3.2:-9572714 | MS.gene65833:CDS |
| CAATCAATCGCATTCTTTAG+CGG | 0.506871 | 3.2:+9572505 | None:intergenic |
| GTTGGAGGAGCCTTTGGTGG+AGG | 0.513008 | 3.2:-9572430 | MS.gene65833:CDS |
| CATCAAGACCACCAAATGCA+TGG | 0.519270 | 3.2:-9572480 | MS.gene65833:CDS |
| GTAAATTACCATAACGAATG+AGG | 0.533048 | 3.2:+9573341 | None:intergenic |
| AGTGTTGGAGGAGCCTTTGG+TGG | 0.533206 | 3.2:-9572433 | MS.gene65833:CDS |
| TCAAGATCAGAGTTCAACAT+TGG | 0.545865 | 3.2:+9572723 | None:intergenic |
| GCTGCCATAGTAAGTGTTGG+AGG | 0.554560 | 3.2:-9572445 | MS.gene65833:CDS |
| AGACCACCAAATGCATGGGC+TGG | 0.561726 | 3.2:-9572475 | MS.gene65833:CDS |
| CCAACACTTACTATGGCAGC+AGG | 0.570215 | 3.2:+9572448 | None:intergenic |
| ATCAAGACCACCAAATGCAT+GGG | 0.580578 | 3.2:-9572479 | MS.gene65833:CDS |
| CCTGCTGCCATAGTAAGTGT+TGG | 0.586831 | 3.2:-9572448 | MS.gene65833:CDS |
| AATGAGGCCAGTATGAAAAG+AGG | 0.609156 | 3.2:+9573357 | None:intergenic |
| AATACATCTAGGTAGAACTC+AGG | 0.627908 | 3.2:+9572346 | None:intergenic |
| ACATCATCTTCGCCAAATCG+GGG | 0.637712 | 3.2:-9572398 | MS.gene65833:CDS |
| TTGATTAACAAATAATGACA+AGG | 0.643119 | 3.2:-9573420 | None:intergenic |
| ATGTAACGATGATGGTGACT+TGG | 0.649079 | 3.2:-9572308 | MS.gene65833:CDS |
| TGATTAACAAATAATGACAA+GGG | 0.676333 | 3.2:-9573419 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTAGCAAAAAAAAAAAAA+AGG | - | chr3.2:9572513-9572532 | MS.gene65833:intron | 15.0% |
| !! | TATTAATGAAATGAATATCA+AGG | + | chr3.2:9573263-9573282 | None:intergenic | 15.0% |
| !! | TCTTTGAATATTAAATTTGA+TGG | - | chr3.2:9572790-9572809 | MS.gene65833:CDS | 15.0% |
| !!! | ACATTTTTTTTTCTATTCAT+TGG | - | chr3.2:9572817-9572836 | MS.gene65833:intron | 15.0% |
| !!! | TTTAACTTGTTGAAAAAATA+GGG | - | chr3.2:9572716-9572735 | MS.gene65833:CDS | 15.0% |
| !! | AAAAAGAATCTTATTGACAA+AGG | + | chr3.2:9573072-9573091 | None:intergenic | 20.0% |
| !! | AAATATCAATATAGTCGATT+TGG | + | chr3.2:9572880-9572899 | None:intergenic | 20.0% |
| !! | AATCGACTATATTGATATTT+CGG | - | chr3.2:9572880-9572899 | MS.gene65833:intron | 20.0% |
| !! | ATATTGCATATTATATACAG+GGG | - | chr3.2:9572422-9572441 | MS.gene65833:CDS | 20.0% |
| !! | GATATTGCATATTATATACA+GGG | - | chr3.2:9572421-9572440 | MS.gene65833:CDS | 20.0% |
| !!! | ATATTTTAAATGTAGAGAAG+TGG | + | chr3.2:9572472-9572491 | None:intergenic | 20.0% |
| !!! | GTTTAACTTGTTGAAAAAAT+AGG | - | chr3.2:9572715-9572734 | MS.gene65833:CDS | 20.0% |
| ! | AAAAGTTGAAATTAACCTGT+CGG | - | chr3.2:9572661-9572680 | MS.gene65833:CDS | 25.0% |
| ! | AAACTGAGTGAATATTGTTT+AGG | - | chr3.2:9572556-9572575 | MS.gene65833:intron | 25.0% |
| ! | AACTGAGTGAATATTGTTTA+GGG | - | chr3.2:9572557-9572576 | MS.gene65833:intron | 25.0% |
| ! | ATTCAAAGACTCAAAATCAA+AGG | + | chr3.2:9572779-9572798 | None:intergenic | 25.0% |
| ! | GAATATAATTATTCTGTCTC+AGG | - | chr3.2:9573013-9573032 | MS.gene65833:intron | 25.0% |
| ! | GAGACAGAATAATTATATTC+AGG | + | chr3.2:9573013-9573032 | None:intergenic | 25.0% |
| ! | GGATATTGCATATTATATAC+AGG | - | chr3.2:9572420-9572439 | MS.gene65833:CDS | 25.0% |
| ! | TATTGCATATTATATACAGG+GGG | - | chr3.2:9572423-9572442 | MS.gene65833:CDS | 25.0% |
| !! | TGAGTTTAGTTTAATTGGTA+GGG | - | chr3.2:9572399-9572418 | MS.gene65833:CDS | 25.0% |
| AAGGAAAAAAAGAAGAGAAG+AGG | + | chr3.2:9572344-9572363 | None:intergenic | 30.0% | |
| AATTTCTGCCTTGAAGTTTA+AGG | + | chr3.2:9573407-9573426 | None:intergenic | 30.0% | |
| ACCAATTAAACTAAACTCAC+CGG | + | chr3.2:9572398-9572417 | None:intergenic | 30.0% | |
| ACTGAGTGAATATTGTTTAG+GGG | - | chr3.2:9572558-9572577 | MS.gene65833:intron | 30.0% | |
| ATATTATATACAGGGGGTTA+GGG | - | chr3.2:9572429-9572448 | MS.gene65833:CDS | 30.0% | |
| ATTTCTGCCTTGAAGTTTAA+GGG | + | chr3.2:9573406-9573425 | None:intergenic | 30.0% | |
| CTAAGCAAAAATGTTCTTGA+TGG | - | chr3.2:9572851-9572870 | MS.gene65833:intron | 30.0% | |
| GAATTTACCCTTAAACTTCA+AGG | - | chr3.2:9573396-9573415 | MS.gene65833:CDS | 30.0% | |
| GTAAATTACCATAACGAATG+AGG | + | chr3.2:9572293-9572312 | None:intergenic | 30.0% | |
| TGAAGAGATCAAGAATAGAT+TGG | - | chr3.2:9573350-9573369 | MS.gene65833:CDS | 30.0% | |
| TTTAAGGGTAAATTCCTTCA+AGG | + | chr3.2:9573391-9573410 | None:intergenic | 30.0% | |
| ! | ACTTTTCCAACCTAAAATTG+CGG | + | chr3.2:9572647-9572666 | None:intergenic | 30.0% |
| ! | CTATTAAAACCCGCAATTTT+AGG | - | chr3.2:9572634-9572653 | MS.gene65833:CDS | 30.0% |
| ! | GTGAGTTTAGTTTAATTGGT+AGG | - | chr3.2:9572398-9572417 | MS.gene65833:CDS | 30.0% |
| ! | TTTTCAACAAGTTAAACGAC+TGG | + | chr3.2:9572712-9572731 | None:intergenic | 30.0% |
| !! | AACTTGTTGAAAAAATAGGG+CGG | - | chr3.2:9572719-9572738 | MS.gene65833:CDS | 30.0% |
| !! | CTAAAATTGCGGGTTTTAAT+AGG | + | chr3.2:9572636-9572655 | None:intergenic | 30.0% |
| AACTCTGATCTTGAGAAAGA+AGG | - | chr3.2:9572917-9572936 | MS.gene65833:intron | 35.0% | |
| AATACATCTAGGTAGAACTC+AGG | + | chr3.2:9573288-9573307 | None:intergenic | 35.0% | |
| ATTAAGATTGTTGCTCTCTC+TGG | - | chr3.2:9572237-9572256 | MS.gene65833:CDS | 35.0% | |
| CAATCAATCGCATTCTTTAG+CGG | + | chr3.2:9573129-9573148 | None:intergenic | 35.0% | |
| CATATTATATACAGGGGGTT+AGG | - | chr3.2:9572428-9572447 | MS.gene65833:CDS | 35.0% | |
| CCAATTAAACTAAACTCACC+GGG | + | chr3.2:9572397-9572416 | None:intergenic | 35.0% | |
| CCAGAAAAATGTAACGATGA+TGG | - | chr3.2:9573315-9573334 | MS.gene65833:intron | 35.0% | |
| CTCGAAGTAGTCATTTAGAA+AGG | + | chr3.2:9572363-9572382 | None:intergenic | 35.0% | |
| CTGAGTGAATATTGTTTAGG+GGG | - | chr3.2:9572559-9572578 | MS.gene65833:intron | 35.0% | |
| CTGGATGCTTAAATACATCT+AGG | + | chr3.2:9573299-9573318 | None:intergenic | 35.0% | |
| CTTTCTAAATGACTACTTCG+AGG | - | chr3.2:9572361-9572380 | MS.gene65833:CDS | 35.0% | |
| GCTAAAGAATGCGATTGATT+GGG | - | chr3.2:9573128-9573147 | MS.gene65833:intron | 35.0% | |
| GTTTAATAAACCTATCCGAC+AGG | + | chr3.2:9572679-9572698 | None:intergenic | 35.0% | |
| TCAAGATCAGAGTTCAACAT+TGG | + | chr3.2:9572911-9572930 | None:intergenic | 35.0% | |
| TTGAAATTAACCTGTCGGAT+AGG | - | chr3.2:9572666-9572685 | MS.gene65833:CDS | 35.0% | |
| ! | CCATCATCGTTACATTTTTC+TGG | + | chr3.2:9573318-9573337 | None:intergenic | 35.0% |
| ! | CTTTTCCAACCTAAAATTGC+GGG | + | chr3.2:9572646-9572665 | None:intergenic | 35.0% |
| !! | AATTGCGGGTTTTAATAGGT+CGG | + | chr3.2:9572632-9572651 | None:intergenic | 35.0% |
| !! | TAAAACCCGCAATTTTAGGT+TGG | - | chr3.2:9572638-9572657 | MS.gene65833:CDS | 35.0% |
| AACATCATCTTCGCCAAATC+GGG | - | chr3.2:9573232-9573251 | MS.gene65833:intron | 40.0% | |
| AATGAGGCCAGTATGAAAAG+AGG | + | chr3.2:9572277-9572296 | None:intergenic | 40.0% | |
| ATCAAGACCACCAAATGCAT+GGG | - | chr3.2:9573152-9573171 | MS.gene65833:intron | 40.0% | |
| CAACATCATCTTCGCCAAAT+CGG | - | chr3.2:9573231-9573250 | MS.gene65833:intron | 40.0% | |
| CGCTAAAGAATGCGATTGAT+TGG | - | chr3.2:9573127-9573146 | MS.gene65833:intron | 40.0% | |
| GAAAGTTCTTGTGTCCTTGA+AGG | - | chr3.2:9573374-9573393 | MS.gene65833:CDS | 40.0% | |
| TATCAAGGAAAACCCCGATT+TGG | + | chr3.2:9573248-9573267 | None:intergenic | 40.0% | |
| TTGTTGAAAAAATAGGGCGG+TGG | - | chr3.2:9572722-9572741 | MS.gene65833:CDS | 40.0% | |
| ! | ATGTAACGATGATGGTGACT+TGG | - | chr3.2:9573323-9573342 | MS.gene65833:intron | 40.0% |
| ! | CCCGGTGAGTTTAGTTTAAT+TGG | - | chr3.2:9572394-9572413 | MS.gene65833:CDS | 40.0% |
| ! | CGAAAAGCCTCTTTTCATAC+TGG | - | chr3.2:9572267-9572286 | MS.gene65833:CDS | 40.0% |
| ACATCATCTTCGCCAAATCG+GGG | - | chr3.2:9573233-9573252 | MS.gene65833:intron | 45.0% | |
| CATCAAGACCACCAAATGCA+TGG | - | chr3.2:9573151-9573170 | MS.gene65833:intron | 45.0% | |
| CGAAAAGCTTCAACTTCAGC+TGG | + | chr3.2:9572950-9572969 | None:intergenic | 45.0% | |
| CTAAGTAGGGGTGGCAAAAT+AGG | - | chr3.2:9572592-9572611 | MS.gene65833:intron | 45.0% | |
| CTTCGAGGCTAATCAAATCC+CGG | - | chr3.2:9572376-9572395 | MS.gene65833:CDS | 45.0% | |
| GGAGAGAAGACACTAAGTAG+GGG | - | chr3.2:9572580-9572599 | MS.gene65833:intron | 45.0% | |
| GGGAGAGAAGACACTAAGTA+GGG | - | chr3.2:9572579-9572598 | MS.gene65833:intron | 45.0% | |
| ! | CATACTGGCCTCATTCGTTA+TGG | - | chr3.2:9572282-9572301 | MS.gene65833:CDS | 45.0% |
| ! | TTGAGCTTTTCCTCCACCAA+AGG | + | chr3.2:9573214-9573233 | None:intergenic | 45.0% |
| CAAAATAGGTCGAGCCTGTC+GGG | - | chr3.2:9572606-9572625 | MS.gene65833:intron | 50.0% | |
| CCAACACTTACTATGGCAGC+AGG | + | chr3.2:9573186-9573205 | None:intergenic | 50.0% | |
| CCTGCTGCCATAGTAAGTGT+TGG | - | chr3.2:9573183-9573202 | MS.gene65833:intron | 50.0% | |
| GAGAAGACACTAAGTAGGGG+TGG | - | chr3.2:9572583-9572602 | MS.gene65833:intron | 50.0% | |
| GCAAAATAGGTCGAGCCTGT+CGG | - | chr3.2:9572605-9572624 | MS.gene65833:intron | 50.0% | |
| GGCTCCTCCAACACTTACTA+TGG | + | chr3.2:9573193-9573212 | None:intergenic | 50.0% | |
| GGGGAGAGAAGACACTAAGT+AGG | - | chr3.2:9572578-9572597 | MS.gene65833:intron | 50.0% | |
| GGTTTACCAGCCCATGCATT+TGG | + | chr3.2:9573165-9573184 | None:intergenic | 50.0% | |
| TGAAAAAATAGGGCGGTGGC+AGG | - | chr3.2:9572726-9572745 | MS.gene65833:CDS | 50.0% | |
| TTACCAGCCCATGCATTTGG+TGG | + | chr3.2:9573162-9573181 | None:intergenic | 50.0% | |
| ! | TTTTAATAGGTCGGCCCGAC+AGG | + | chr3.2:9572623-9572642 | None:intergenic | 50.0% |
| !! | GCTGCCATAGTAAGTGTTGG+AGG | - | chr3.2:9573186-9573205 | MS.gene65833:intron | 50.0% |
| !! | GTAAGTGTTGGAGGAGCCTT+TGG | - | chr3.2:9573195-9573214 | MS.gene65833:intron | 50.0% |
| AGACCACCAAATGCATGGGC+TGG | - | chr3.2:9573156-9573175 | MS.gene65833:intron | 55.0% | |
| ! | AGTGTTGGAGGAGCCTTTGG+TGG | - | chr3.2:9573198-9573217 | MS.gene65833:intron | 55.0% |
| GGGGGTTAGGGTTCGAAGCT+CGG | - | chr3.2:9572441-9572460 | MS.gene65833:CDS | 60.0% | |
| GTTGGAGGAGCCTTTGGTGG+AGG | - | chr3.2:9573201-9573220 | MS.gene65833:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 9572225 | 9573428 | 9572225 | ID=MS.gene65833 |
| chr3.2 | mRNA | 9572225 | 9573428 | 9572225 | ID=MS.gene65833.t1;Parent=MS.gene65833 |
| chr3.2 | exon | 9573350 | 9573428 | 9573350 | ID=MS.gene65833.t1.exon1;Parent=MS.gene65833.t1 |
| chr3.2 | CDS | 9573350 | 9573428 | 9573350 | ID=cds.MS.gene65833.t1;Parent=MS.gene65833.t1 |
| chr3.2 | exon | 9572619 | 9572810 | 9572619 | ID=MS.gene65833.t1.exon2;Parent=MS.gene65833.t1 |
| chr3.2 | CDS | 9572619 | 9572810 | 9572619 | ID=cds.MS.gene65833.t1;Parent=MS.gene65833.t1 |
| chr3.2 | exon | 9572225 | 9572529 | 9572225 | ID=MS.gene65833.t1.exon3;Parent=MS.gene65833.t1 |
| chr3.2 | CDS | 9572225 | 9572529 | 9572225 | ID=cds.MS.gene65833.t1;Parent=MS.gene65833.t1 |
| Gene Sequence |
| Protein sequence |
