Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053033.t1 | XP_003618167.1 | 96.4 | 220 | 8 | 0 | 1 | 220 | 1 | 220 | 2.80E-116 | 427.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053033.t1 | Q9FMA8 | 65.1 | 215 | 72 | 2 | 4 | 215 | 7 | 221 | 8.0e-72 | 271.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053033.t1 | G7KQ20 | 96.4 | 220 | 8 | 0 | 1 | 220 | 1 | 220 | 2.0e-116 | 427.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene053033 | 0.804695 | 1.91E-49 | -1.69E-46 |
| MS.gene050095 | MS.gene053033 | 0.803232 | 3.85E-49 | -1.69E-46 |
| MS.gene050647 | MS.gene053033 | 0.816475 | 5.43E-52 | -1.69E-46 |
| MS.gene052606 | MS.gene053033 | 0.805285 | 1.44E-49 | -1.69E-46 |
| MS.gene053027 | MS.gene053033 | 0.804723 | 1.88E-49 | -1.69E-46 |
| MS.gene053030 | MS.gene053033 | 0.854561 | 1.13E-61 | -1.69E-46 |
| MS.gene053031 | MS.gene053033 | 0.856354 | 3.40E-62 | -1.69E-46 |
| MS.gene053033 | MS.gene054146 | 0.802008 | 6.88E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene05483 | 0.804822 | 1.80E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene057547 | 0.825339 | 4.95E-54 | -1.69E-46 |
| MS.gene053033 | MS.gene062005 | 0.817723 | 2.84E-52 | -1.69E-46 |
| MS.gene053033 | MS.gene062006 | 0.824278 | 8.80E-54 | -1.69E-46 |
| MS.gene053033 | MS.gene066602 | 0.802227 | 6.20E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene067733 | 0.811681 | 6.20E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene069482 | 0.827659 | 1.38E-54 | -1.69E-46 |
| MS.gene053033 | MS.gene08733 | 0.826381 | 2.80E-54 | -1.69E-46 |
| MS.gene053033 | MS.gene25134 | 0.809541 | 1.80E-50 | -1.69E-46 |
| MS.gene053033 | MS.gene28594 | 0.805095 | 1.58E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene29827 | 0.80039 | 1.47E-48 | -1.69E-46 |
| MS.gene053033 | MS.gene35464 | 0.800469 | 1.42E-48 | -1.69E-46 |
| MS.gene053033 | MS.gene35597 | 0.814494 | 1.50E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene35598 | 0.800962 | 1.13E-48 | -1.69E-46 |
| MS.gene053033 | MS.gene37747 | 0.831668 | 1.46E-55 | -1.69E-46 |
| MS.gene053033 | MS.gene37749 | 0.802201 | 6.28E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene42080 | 0.838651 | 2.53E-57 | -1.69E-46 |
| MS.gene053033 | MS.gene44712 | 0.82114 | 4.73E-53 | -1.69E-46 |
| MS.gene053033 | MS.gene47437 | 0.825992 | 3.46E-54 | -1.69E-46 |
| MS.gene053033 | MS.gene48314 | 0.801079 | 1.07E-48 | -1.69E-46 |
| MS.gene053033 | MS.gene48805 | 0.842383 | 2.67E-58 | -1.69E-46 |
| MS.gene053033 | MS.gene48806 | 0.848705 | 5.17E-60 | -1.69E-46 |
| MS.gene053033 | MS.gene48807 | 0.831724 | 1.42E-55 | -1.69E-46 |
| MS.gene053033 | MS.gene50786 | 0.823086 | 1.67E-53 | -1.69E-46 |
| MS.gene053033 | MS.gene50789 | 0.820034 | 8.49E-53 | -1.69E-46 |
| MS.gene053033 | MS.gene52370 | 0.803784 | 2.96E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene54029 | 0.813211 | 2.87E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene54347 | 0.804574 | 2.02E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene56384 | 0.812018 | 5.24E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene56509 | 0.806955 | 6.40E-50 | -1.69E-46 |
| MS.gene053033 | MS.gene57807 | 0.806709 | 7.21E-50 | -1.69E-46 |
| MS.gene053033 | MS.gene59002 | 0.815081 | 1.11E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene59003 | 0.800589 | 1.34E-48 | -1.69E-46 |
| MS.gene053033 | MS.gene59005 | 0.82428 | 8.79E-54 | -1.69E-46 |
| MS.gene053033 | MS.gene61142 | 0.818339 | 2.06E-52 | -1.69E-46 |
| MS.gene053033 | MS.gene61143 | 0.808883 | 2.49E-50 | -1.69E-46 |
| MS.gene053033 | MS.gene61194 | 0.820605 | 6.28E-53 | -1.69E-46 |
| MS.gene053033 | MS.gene62117 | 0.819819 | 9.51E-53 | -1.69E-46 |
| MS.gene053033 | MS.gene62222 | 0.810386 | 1.18E-50 | -1.69E-46 |
| MS.gene053033 | MS.gene63444 | 0.817085 | 3.96E-52 | -1.69E-46 |
| MS.gene053033 | MS.gene63914 | 0.811062 | 8.45E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene65833 | 0.804694 | 1.91E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene65951 | 0.805598 | 1.24E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene66761 | 0.830087 | 3.58E-55 | -1.69E-46 |
| MS.gene053033 | MS.gene69966 | 0.815659 | 8.26E-52 | -1.69E-46 |
| MS.gene053033 | MS.gene70061 | 0.854468 | 1.21E-61 | -1.69E-46 |
| MS.gene053033 | MS.gene70062 | 0.802807 | 4.71E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene72073 | 0.806059 | 9.88E-50 | -1.69E-46 |
| MS.gene053033 | MS.gene72323 | 0.814223 | 1.72E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene74564 | 0.816635 | 5.00E-52 | -1.69E-46 |
| MS.gene053033 | MS.gene74774 | 0.821558 | 3.79E-53 | -1.69E-46 |
| MS.gene053033 | MS.gene75393 | 0.801109 | 1.05E-48 | -1.69E-46 |
| MS.gene053033 | MS.gene76737 | 0.814243 | 1.70E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene76738 | 0.850788 | 1.35E-60 | -1.69E-46 |
| MS.gene053033 | MS.gene77032 | 0.832009 | 1.21E-55 | -1.69E-46 |
| MS.gene053033 | MS.gene77033 | 0.853001 | 3.19E-61 | -1.69E-46 |
| MS.gene053033 | MS.gene77345 | 0.814898 | 1.22E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene77349 | 0.803663 | 3.13E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene77829 | 0.84172 | 4.01E-58 | -1.69E-46 |
| MS.gene053033 | MS.gene78424 | 0.815807 | 7.65E-52 | -1.69E-46 |
| MS.gene053033 | MS.gene78657 | 0.827866 | 1.23E-54 | -1.69E-46 |
| MS.gene053033 | MS.gene79445 | 0.800712 | 1.27E-48 | -1.69E-46 |
| MS.gene053033 | MS.gene79624 | 0.812652 | 3.81E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene79626 | 0.808662 | 2.77E-50 | -1.69E-46 |
| MS.gene053033 | MS.gene81349 | 0.812342 | 4.45E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene81505 | 0.802897 | 4.51E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene81506 | 0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene053033 | MS.gene81725 | 0.833459 | 5.27E-56 | -1.69E-46 |
| MS.gene053033 | MS.gene82244 | 0.845001 | 5.33E-59 | -1.69E-46 |
| MS.gene053033 | MS.gene82245 | 0.827477 | 1.53E-54 | -1.69E-46 |
| MS.gene053033 | MS.gene82855 | 0.873165 | 1.82E-67 | -1.69E-46 |
| MS.gene053033 | MS.gene82857 | 0.830151 | 3.45E-55 | -1.69E-46 |
| MS.gene053033 | MS.gene82858 | 0.878032 | 3.90E-69 | -1.69E-46 |
| MS.gene053033 | MS.gene82860 | 0.845105 | 5.00E-59 | -1.69E-46 |
| MS.gene053033 | MS.gene83329 | 0.808989 | 2.36E-50 | -1.69E-46 |
| MS.gene053033 | MS.gene84195 | 0.816271 | 6.03E-52 | -1.69E-46 |
| MS.gene053033 | MS.gene84225 | 0.827866 | 1.23E-54 | -1.69E-46 |
| MS.gene053033 | MS.gene84947 | 0.80281 | 4.70E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene85485 | 0.808531 | 2.96E-50 | -1.69E-46 |
| MS.gene053033 | MS.gene87056 | 0.824546 | 7.61E-54 | -1.69E-46 |
| MS.gene053033 | MS.gene87750 | 0.821165 | 4.67E-53 | -1.69E-46 |
| MS.gene053033 | MS.gene88240 | 0.812145 | 4.91E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene89772 | 0.81228 | 4.59E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene89774 | 0.866022 | 3.86E-65 | -1.69E-46 |
| MS.gene053033 | MS.gene91215 | 0.802896 | 4.51E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene91226 | 0.81037 | 1.19E-50 | -1.69E-46 |
| MS.gene053033 | MS.gene95132 | 0.819349 | 1.22E-52 | -1.69E-46 |
| MS.gene053033 | MS.gene95596 | 0.803167 | 3.97E-49 | -1.69E-46 |
| MS.gene053033 | MS.gene95804 | 0.818019 | 2.44E-52 | -1.69E-46 |
| MS.gene053033 | MS.gene96171 | 0.818639 | 1.76E-52 | -1.69E-46 |
| MS.gene053033 | MS.gene96299 | 0.813713 | 2.23E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene96516 | 0.820856 | 5.50E-53 | -1.69E-46 |
| MS.gene053033 | MS.gene97125 | 0.812152 | 4.89E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene97499 | 0.814713 | 1.34E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene98272 | 0.812685 | 3.74E-51 | -1.69E-46 |
| MS.gene053033 | MS.gene99545 | 0.800753 | 1.24E-48 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053033.t1 | MTR_6g005360 | 96.364 | 220 | 8 | 0 | 1 | 220 | 1 | 220 | 4.65e-155 | 429 |
| MS.gene053033.t1 | MTR_6g005310 | 96.804 | 219 | 7 | 0 | 1 | 219 | 1 | 219 | 1.57e-154 | 427 |
| MS.gene053033.t1 | MTR_6g005340 | 96.364 | 220 | 8 | 0 | 1 | 220 | 1 | 220 | 2.81e-154 | 426 |
| MS.gene053033.t1 | MTR_6g005330 | 95.000 | 220 | 11 | 0 | 1 | 220 | 1 | 220 | 1.59e-152 | 422 |
| MS.gene053033.t1 | MTR_1g079490 | 81.279 | 219 | 38 | 3 | 5 | 220 | 4 | 222 | 2.22e-125 | 353 |
| MS.gene053033.t1 | MTR_4g017040 | 76.923 | 221 | 50 | 1 | 1 | 220 | 1 | 221 | 4.16e-121 | 343 |
| MS.gene053033.t1 | MTR_2g019250 | 76.923 | 221 | 50 | 1 | 1 | 220 | 1 | 221 | 1.55e-120 | 341 |
| MS.gene053033.t1 | MTR_5g046410 | 76.018 | 221 | 52 | 1 | 1 | 220 | 1 | 221 | 5.84e-120 | 340 |
| MS.gene053033.t1 | MTR_5g046430 | 76.018 | 221 | 52 | 1 | 1 | 220 | 1 | 221 | 5.84e-120 | 340 |
| MS.gene053033.t1 | MTR_4g017030 | 76.018 | 221 | 52 | 1 | 1 | 220 | 1 | 221 | 5.84e-120 | 340 |
| MS.gene053033.t1 | MTR_4g017050 | 76.018 | 221 | 52 | 1 | 1 | 220 | 1 | 221 | 6.03e-120 | 340 |
| MS.gene053033.t1 | MTR_6g005350 | 75.000 | 220 | 54 | 1 | 1 | 220 | 1 | 219 | 9.30e-113 | 322 |
| MS.gene053033.t1 | MTR_6g005380 | 71.635 | 208 | 58 | 1 | 1 | 207 | 1 | 208 | 3.44e-103 | 297 |
| MS.gene053033.t1 | MTR_2g030855 | 62.312 | 199 | 68 | 2 | 19 | 215 | 19 | 212 | 3.06e-83 | 246 |
| MS.gene053033.t1 | MTR_1g023770 | 62.312 | 199 | 65 | 2 | 19 | 215 | 19 | 209 | 3.68e-83 | 246 |
| MS.gene053033.t1 | MTR_2g031270 | 62.000 | 200 | 68 | 3 | 19 | 215 | 19 | 213 | 1.39e-80 | 240 |
| MS.gene053033.t1 | MTR_2g030895 | 65.116 | 172 | 57 | 2 | 47 | 215 | 7 | 178 | 1.20e-75 | 226 |
| MS.gene053033.t1 | MTR_2g030865 | 65.116 | 172 | 57 | 2 | 47 | 215 | 7 | 178 | 3.02e-74 | 223 |
| MS.gene053033.t1 | MTR_1g085500 | 47.619 | 210 | 100 | 4 | 11 | 214 | 8 | 213 | 4.14e-60 | 188 |
| MS.gene053033.t1 | MTR_2g031300 | 60.000 | 160 | 42 | 2 | 47 | 204 | 7 | 146 | 1.87e-59 | 184 |
| MS.gene053033.t1 | MTR_7g111240 | 51.531 | 196 | 89 | 3 | 22 | 215 | 20 | 211 | 6.11e-57 | 180 |
| MS.gene053033.t1 | MTR_1g085140 | 49.000 | 200 | 96 | 3 | 18 | 215 | 20 | 215 | 6.60e-57 | 180 |
| MS.gene053033.t1 | MTR_7g111240 | 51.020 | 196 | 87 | 3 | 22 | 215 | 20 | 208 | 1.54e-54 | 174 |
| MS.gene053033.t1 | MTR_5g036570 | 47.716 | 197 | 96 | 4 | 22 | 215 | 27 | 219 | 4.96e-53 | 170 |
| MS.gene053033.t1 | MTR_1g112200 | 42.791 | 215 | 107 | 6 | 3 | 215 | 7 | 207 | 4.84e-47 | 154 |
| MS.gene053033.t1 | MTR_1g060120 | 38.739 | 222 | 123 | 6 | 2 | 215 | 5 | 221 | 2.48e-43 | 145 |
| MS.gene053033.t1 | MTR_2g041550 | 45.989 | 187 | 93 | 4 | 28 | 212 | 23 | 203 | 2.61e-43 | 145 |
| MS.gene053033.t1 | MTR_8g020750 | 47.337 | 169 | 75 | 4 | 27 | 189 | 24 | 184 | 9.66e-42 | 141 |
| MS.gene053033.t1 | MTR_2g041570 | 39.070 | 215 | 116 | 5 | 1 | 213 | 3 | 204 | 3.64e-39 | 134 |
| MS.gene053033.t1 | MTR_2g041580 | 39.252 | 214 | 115 | 5 | 1 | 212 | 3 | 203 | 4.05e-39 | 134 |
| MS.gene053033.t1 | MTR_8g020590 | 40.000 | 190 | 106 | 4 | 26 | 213 | 19 | 202 | 1.28e-35 | 125 |
| MS.gene053033.t1 | MTR_8g007300 | 39.594 | 197 | 103 | 5 | 22 | 208 | 26 | 216 | 8.09e-35 | 123 |
| MS.gene053033.t1 | MTR_3g019710 | 38.693 | 199 | 114 | 4 | 18 | 215 | 14 | 205 | 2.03e-33 | 119 |
| MS.gene053033.t1 | MTR_8g020630 | 37.688 | 199 | 116 | 4 | 18 | 215 | 14 | 205 | 2.14e-33 | 119 |
| MS.gene053033.t1 | MTR_8g020650 | 39.683 | 189 | 106 | 4 | 28 | 215 | 24 | 205 | 9.39e-33 | 117 |
| MS.gene053033.t1 | MTR_3g019680 | 37.441 | 211 | 118 | 5 | 6 | 215 | 7 | 204 | 7.23e-32 | 115 |
| MS.gene053033.t1 | MTR_3g019650 | 36.967 | 211 | 119 | 5 | 6 | 215 | 7 | 204 | 1.95e-31 | 114 |
| MS.gene053033.t1 | MTR_2g045100 | 37.441 | 211 | 119 | 5 | 6 | 215 | 7 | 205 | 3.14e-31 | 114 |
| MS.gene053033.t1 | MTR_2g036120 | 37.688 | 199 | 116 | 4 | 18 | 215 | 14 | 205 | 4.57e-31 | 113 |
| MS.gene053033.t1 | MTR_8g020670 | 37.173 | 191 | 112 | 4 | 26 | 215 | 22 | 205 | 6.33e-30 | 110 |
| MS.gene053033.t1 | MTR_2g044040 | 36.683 | 199 | 118 | 4 | 18 | 215 | 14 | 205 | 1.57e-29 | 109 |
| MS.gene053033.t1 | MTR_4g010340 | 39.080 | 174 | 99 | 4 | 43 | 215 | 34 | 201 | 2.47e-29 | 108 |
| MS.gene053033.t1 | MTR_8g020610 | 38.947 | 190 | 106 | 6 | 28 | 215 | 22 | 203 | 2.80e-29 | 108 |
| MS.gene053033.t1 | MTR_3g096330 | 33.491 | 212 | 136 | 4 | 3 | 212 | 557 | 765 | 4.10e-29 | 114 |
| MS.gene053033.t1 | MTR_8g020770 | 37.037 | 216 | 115 | 6 | 6 | 215 | 8 | 208 | 6.60e-29 | 108 |
| MS.gene053033.t1 | MTR_8g020763 | 35.429 | 175 | 106 | 3 | 43 | 215 | 17 | 186 | 3.79e-27 | 102 |
| MS.gene053033.t1 | MTR_2g019780 | 33.641 | 217 | 133 | 6 | 1 | 215 | 1 | 208 | 4.05e-27 | 103 |
| MS.gene053033.t1 | MTR_5g031460 | 34.171 | 199 | 123 | 4 | 18 | 215 | 14 | 205 | 7.37e-27 | 102 |
| MS.gene053033.t1 | MTR_0284s0010 | 35.176 | 199 | 121 | 4 | 18 | 215 | 14 | 205 | 7.37e-27 | 102 |
| MS.gene053033.t1 | MTR_8g020760 | 33.649 | 211 | 132 | 4 | 6 | 215 | 4 | 207 | 1.02e-26 | 102 |
| MS.gene053033.t1 | MTR_7g011340 | 35.602 | 191 | 115 | 4 | 26 | 215 | 22 | 205 | 3.33e-26 | 100 |
| MS.gene053033.t1 | MTR_4g052770 | 39.161 | 143 | 82 | 3 | 74 | 215 | 67 | 205 | 3.84e-26 | 100 |
| MS.gene053033.t1 | MTR_4g052780 | 39.161 | 143 | 82 | 3 | 74 | 215 | 67 | 205 | 6.26e-26 | 100 |
| MS.gene053033.t1 | MTR_2g086620 | 34.562 | 217 | 111 | 8 | 6 | 215 | 12 | 204 | 1.40e-25 | 99.4 |
| MS.gene053033.t1 | MTR_2g086630 | 34.562 | 217 | 111 | 8 | 6 | 215 | 12 | 204 | 1.82e-25 | 99.0 |
| MS.gene053033.t1 | MTR_2g086640 | 34.597 | 211 | 119 | 7 | 6 | 215 | 11 | 203 | 2.13e-25 | 98.6 |
| MS.gene053033.t1 | MTR_3g073170 | 35.450 | 189 | 112 | 5 | 28 | 215 | 27 | 206 | 3.37e-24 | 95.9 |
| MS.gene053033.t1 | MTR_2g030915 | 55.405 | 74 | 19 | 1 | 93 | 166 | 1 | 60 | 9.07e-20 | 80.9 |
| MS.gene053033.t1 | MTR_3g019810 | 32.487 | 197 | 117 | 7 | 18 | 212 | 120 | 302 | 1.29e-16 | 77.4 |
| MS.gene053033.t1 | MTR_4g027415 | 38.889 | 126 | 71 | 3 | 26 | 150 | 22 | 142 | 5.05e-16 | 72.4 |
| MS.gene053033.t1 | MTR_2g072560 | 41.346 | 104 | 58 | 2 | 18 | 120 | 14 | 115 | 5.35e-13 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053033.t1 | AT5G39120 | 64.840 | 219 | 73 | 3 | 1 | 215 | 1 | 219 | 3.55e-93 | 272 |
| MS.gene053033.t1 | AT5G39150 | 64.384 | 219 | 74 | 3 | 1 | 215 | 1 | 219 | 2.09e-92 | 270 |
| MS.gene053033.t1 | AT5G39180 | 64.384 | 219 | 74 | 3 | 1 | 215 | 1 | 219 | 4.44e-92 | 269 |
| MS.gene053033.t1 | AT5G39110 | 64.651 | 215 | 73 | 2 | 4 | 215 | 6 | 220 | 1.30e-91 | 268 |
| MS.gene053033.t1 | AT5G38940 | 67.347 | 196 | 62 | 1 | 22 | 215 | 26 | 221 | 2.09e-90 | 265 |
| MS.gene053033.t1 | AT5G38930 | 68.182 | 198 | 61 | 1 | 20 | 215 | 24 | 221 | 2.35e-90 | 265 |
| MS.gene053033.t1 | AT5G38940 | 67.347 | 196 | 62 | 1 | 22 | 215 | 50 | 245 | 3.46e-90 | 265 |
| MS.gene053033.t1 | AT3G05950 | 66.986 | 209 | 64 | 4 | 11 | 215 | 14 | 221 | 1.72e-88 | 260 |
| MS.gene053033.t1 | AT5G39160 | 66.834 | 199 | 62 | 3 | 20 | 215 | 22 | 219 | 1.97e-88 | 260 |
| MS.gene053033.t1 | AT5G39130 | 66.332 | 199 | 63 | 3 | 20 | 215 | 22 | 219 | 2.68e-88 | 259 |
| MS.gene053033.t1 | AT5G39190 | 63.636 | 220 | 74 | 5 | 1 | 215 | 1 | 219 | 3.37e-88 | 259 |
| MS.gene053033.t1 | AT5G38910 | 63.470 | 219 | 76 | 4 | 1 | 215 | 1 | 219 | 2.72e-87 | 257 |
| MS.gene053033.t1 | AT5G38960 | 65.174 | 201 | 67 | 2 | 18 | 215 | 22 | 222 | 6.45e-87 | 256 |
| MS.gene053033.t1 | AT4G14630 | 61.574 | 216 | 79 | 3 | 4 | 215 | 7 | 222 | 2.43e-85 | 252 |
| MS.gene053033.t1 | AT5G39160 | 64.322 | 199 | 63 | 3 | 20 | 215 | 22 | 215 | 1.30e-83 | 248 |
| MS.gene053033.t1 | AT3G04200 | 63.426 | 216 | 72 | 4 | 6 | 215 | 8 | 222 | 3.97e-82 | 244 |
| MS.gene053033.t1 | AT3G04150 | 57.658 | 222 | 86 | 5 | 1 | 215 | 1 | 221 | 3.55e-75 | 227 |
| MS.gene053033.t1 | AT3G04190 | 59.804 | 204 | 78 | 3 | 15 | 215 | 19 | 221 | 4.52e-75 | 226 |
| MS.gene053033.t1 | AT5G39190 | 57.339 | 218 | 69 | 4 | 1 | 215 | 1 | 197 | 2.47e-74 | 223 |
| MS.gene053033.t1 | AT5G39160 | 57.339 | 218 | 69 | 4 | 1 | 215 | 1 | 197 | 2.75e-74 | 223 |
| MS.gene053033.t1 | AT3G04150 | 54.274 | 234 | 88 | 5 | 1 | 215 | 1 | 234 | 7.78e-73 | 221 |
| MS.gene053033.t1 | AT3G04170 | 56.279 | 215 | 86 | 5 | 5 | 215 | 8 | 218 | 2.42e-71 | 217 |
| MS.gene053033.t1 | AT3G04180 | 56.863 | 204 | 84 | 3 | 15 | 215 | 19 | 221 | 2.86e-71 | 216 |
| MS.gene053033.t1 | AT5G38910 | 51.598 | 219 | 65 | 5 | 1 | 215 | 1 | 182 | 7.28e-61 | 189 |
| MS.gene053033.t1 | AT1G09560 | 50.761 | 197 | 91 | 3 | 22 | 216 | 24 | 216 | 3.09e-58 | 183 |
| MS.gene053033.t1 | AT1G02335 | 47.980 | 198 | 97 | 3 | 20 | 215 | 22 | 215 | 1.25e-57 | 182 |
| MS.gene053033.t1 | AT3G62020 | 47.642 | 212 | 104 | 4 | 7 | 215 | 8 | 215 | 1.51e-56 | 179 |
| MS.gene053033.t1 | AT3G05930 | 46.364 | 220 | 108 | 5 | 1 | 215 | 1 | 215 | 2.63e-56 | 178 |
| MS.gene053033.t1 | AT1G18970 | 45.540 | 213 | 108 | 4 | 7 | 217 | 14 | 220 | 1.07e-54 | 174 |
| MS.gene053033.t1 | AT5G26700 | 46.860 | 207 | 95 | 5 | 11 | 215 | 16 | 209 | 1.17e-53 | 171 |
| MS.gene053033.t1 | AT1G18980 | 45.833 | 216 | 107 | 5 | 4 | 217 | 13 | 220 | 3.45e-53 | 171 |
| MS.gene053033.t1 | AT3G62020 | 48.889 | 180 | 87 | 3 | 39 | 215 | 9 | 186 | 2.63e-49 | 159 |
| MS.gene053033.t1 | AT1G10460 | 42.211 | 199 | 108 | 5 | 22 | 215 | 19 | 215 | 6.47e-48 | 157 |
| MS.gene053033.t1 | AT3G10080 | 40.796 | 201 | 111 | 4 | 19 | 215 | 23 | 219 | 2.21e-43 | 145 |
| MS.gene053033.t1 | AT3G10080 | 40.594 | 202 | 112 | 4 | 18 | 215 | 93 | 290 | 1.04e-42 | 146 |
| MS.gene053033.t1 | AT5G20630 | 44.578 | 166 | 86 | 3 | 26 | 189 | 22 | 183 | 1.44e-39 | 135 |
| MS.gene053033.t1 | AT5G61750 | 42.391 | 184 | 96 | 4 | 6 | 187 | 8 | 183 | 3.12e-38 | 132 |
| MS.gene053033.t1 | AT1G74820 | 37.615 | 218 | 120 | 5 | 8 | 215 | 14 | 225 | 5.55e-36 | 127 |
| MS.gene053033.t1 | AT1G72610 | 38.095 | 189 | 109 | 4 | 26 | 212 | 19 | 201 | 1.65e-32 | 117 |
| MS.gene053033.t1 | AT5G38950 | 64.062 | 64 | 23 | 0 | 144 | 207 | 2 | 65 | 2.53e-20 | 82.8 |
| MS.gene053033.t1 | AT5G39100 | 66.038 | 53 | 18 | 0 | 4 | 56 | 6 | 58 | 2.78e-17 | 73.6 |
Find 49 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTATTGCTAATGCTGTATT+TGG | 0.057045 | 6.2:-1269312 | MS.gene053033:CDS |
| CTTGTTTGTGACAGCCTTCT+TGG | 0.126065 | 6.2:-1270015 | MS.gene053033:CDS |
| TAGTGATTACACCTGGATTT+TGG | 0.253401 | 6.2:+1269331 | None:intergenic |
| TTCACTTTCAATTGAATGTT+GGG | 0.325573 | 6.2:-1269389 | MS.gene053033:CDS |
| AGTATACATACCACCATTCT+TGG | 0.333982 | 6.2:+1269923 | None:intergenic |
| ATACTAGGACTAAACACTTT+AGG | 0.375557 | 6.2:-1269603 | MS.gene053033:CDS |
| TCATTTGCAGTAGCAAGCTT+TGG | 0.385081 | 6.2:+1269702 | None:intergenic |
| GGAAATGCAGTTGTCATTGC+TGG | 0.408325 | 6.2:-1269363 | MS.gene053033:CDS |
| TGCAAATGATTTCTTCTACT+TGG | 0.409808 | 6.2:-1269688 | MS.gene053033:CDS |
| TGAAAGTGAATGAGACCAAT+TGG | 0.411740 | 6.2:+1269402 | None:intergenic |
| AGTATCTCATTAACTGTAAC+CGG | 0.413639 | 6.2:+1269621 | None:intergenic |
| CCACTATGTTATTGTCCACT+TGG | 0.415021 | 6.2:+1269247 | None:intergenic |
| ATTCACTTTCAATTGAATGT+TGG | 0.422768 | 6.2:-1269390 | MS.gene053033:CDS |
| TTCTTCTACTTGGTGAAAGA+AGG | 0.430631 | 6.2:-1269678 | MS.gene053033:CDS |
| TTTCAATTGAATGTTGGGTA+TGG | 0.435827 | 6.2:-1269384 | MS.gene053033:CDS |
| ACAAAAGTCTTGTAAAGGGC+TGG | 0.441843 | 6.2:+1269962 | None:intergenic |
| GATGTCTTCGTGTTTCCAAT+TGG | 0.447951 | 6.2:-1269417 | MS.gene053033:CDS |
| CTATTGCTAATGCTGTATTT+GGG | 0.459960 | 6.2:-1269311 | MS.gene053033:CDS |
| ATAAGAATCTCAGTGGCTCT+AGG | 0.464256 | 6.2:+1269522 | None:intergenic |
| TTGGAGGGTACTCTTTATGT+CGG | 0.467130 | 6.2:-1269495 | MS.gene053033:CDS |
| ATTGTCCACTTGGAAAGCTT+TGG | 0.467417 | 6.2:+1269257 | None:intergenic |
| TGAGATTCTTATAGTGTTGG+AGG | 0.480868 | 6.2:-1269511 | MS.gene053033:CDS |
| TCGCATTGACTTCGCTGCTA+GGG | 0.481033 | 6.2:-1269568 | MS.gene053033:CDS |
| GCCACACAAAAGTCTTGTAA+AGG | 0.484515 | 6.2:+1269957 | None:intergenic |
| TGGAGGGTACTCTTTATGTC+GGG | 0.488039 | 6.2:-1269494 | MS.gene053033:CDS |
| CTCGCATTGACTTCGCTGCT+AGG | 0.500918 | 6.2:-1269569 | MS.gene053033:CDS |
| CCACACAAAAGTCTTGTAAA+GGG | 0.505298 | 6.2:+1269958 | None:intergenic |
| CAAAAGTCTTGTAAAGGGCT+GGG | 0.515376 | 6.2:+1269963 | None:intergenic |
| TTGTAAAGGGCTGGGATCAA+AGG | 0.516879 | 6.2:+1269971 | None:intergenic |
| CACTGAGATTCTTATAGTGT+TGG | 0.518785 | 6.2:-1269514 | MS.gene053033:CDS |
| TAAGAATCTCAGTGGCTCTA+GGG | 0.542644 | 6.2:+1269523 | None:intergenic |
| GTGGCTCTAGGGTGAGTATG+TGG | 0.548107 | 6.2:+1269534 | None:intergenic |
| CGCATTGACTTCGCTGCTAG+GGG | 0.548623 | 6.2:-1269567 | MS.gene053033:CDS |
| GGACTTAGCAGCCAAAATCC+AGG | 0.549743 | 6.2:-1269342 | MS.gene053033:CDS |
| GTTACAGTTAATGAGATACT+AGG | 0.558743 | 6.2:-1269618 | MS.gene053033:CDS |
| ACAAGATGCTAAAGCCAAGA+AGG | 0.574992 | 6.2:+1270001 | None:intergenic |
| TGTGAATGGCAAATTCTGCA+AGG | 0.584711 | 6.2:-1269727 | MS.gene053033:CDS |
| CCAAGTGGACAATAACATAG+TGG | 0.613774 | 6.2:-1269247 | MS.gene053033:CDS |
| GAGATTCTTATAGTGTTGGA+GGG | 0.619014 | 6.2:-1269510 | MS.gene053033:CDS |
| TTAGCAATAGTGATTACACC+TGG | 0.624375 | 6.2:+1269324 | None:intergenic |
| ATCAATGATACCAAGAATGG+TGG | 0.631783 | 6.2:-1269933 | MS.gene053033:intron |
| GCTATCAATGATACCAAGAA+TGG | 0.640005 | 6.2:-1269936 | MS.gene053033:CDS |
| ATCACAAAAGTACTCAACAA+AGG | 0.644517 | 6.2:-1269441 | MS.gene053033:CDS |
| AGGGCTGGGATCAAAGGCAA+AGG | 0.658426 | 6.2:+1269977 | None:intergenic |
| GGAAACACGTCAAATCCACT+TGG | 0.662851 | 6.2:-1269657 | MS.gene053033:CDS |
| TCTCACCAAAGCTTTCCAAG+TGG | 0.665947 | 6.2:-1269262 | MS.gene053033:CDS |
| ACTTGGTTCAAAAGTGACAC+CGG | 0.669513 | 6.2:-1269640 | MS.gene053033:CDS |
| GCTCTAGGGTGAGTATGTGG+AGG | 0.673911 | 6.2:+1269537 | None:intergenic |
| CAACACTATAAGAATCTCAG+TGG | 0.721951 | 6.2:+1269515 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATATACGTATATAAG+TGG | - | chr6.2:1269445-1269464 | MS.gene053033:CDS | 15.0% |
| !! | TACGTATATATTAATGTTGT+CGG | + | chr6.2:1269439-1269458 | None:intergenic | 20.0% |
| ! | ACAATCTTCAAAAACAATTC+TGG | - | chr6.2:1270014-1270033 | MS.gene053033:CDS | 25.0% |
| ! | ACTATGATACAAAAGTTTCA+CGG | - | chr6.2:1269399-1269418 | MS.gene053033:CDS | 25.0% |
| ! | ATTCACTTTCAATTGAATGT+TGG | - | chr6.2:1269848-1269867 | MS.gene053033:intron | 25.0% |
| ! | CAATCTTCAAAAACAATTCT+GGG | - | chr6.2:1270015-1270034 | MS.gene053033:CDS | 25.0% |
| ! | TCATAGTTCAATCAGTTTAA+CGG | + | chr6.2:1269386-1269405 | None:intergenic | 25.0% |
| ! | TTCACTTTCAATTGAATGTT+GGG | - | chr6.2:1269849-1269868 | MS.gene053033:intron | 25.0% |
| !!! | AGAACTTCTGAAGAAATTTT+TGG | + | chr6.2:1269959-1269978 | None:intergenic | 25.0% |
| ACTATTGCTAATGCTGTATT+TGG | - | chr6.2:1269926-1269945 | MS.gene053033:intron | 30.0% | |
| AGTATCTCATTAACTGTAAC+CGG | + | chr6.2:1269620-1269639 | None:intergenic | 30.0% | |
| ATACTAGGACTAAACACTTT+AGG | - | chr6.2:1269635-1269654 | MS.gene053033:CDS | 30.0% | |
| CATAGTTCAATCAGTTTAAC+GGG | + | chr6.2:1269385-1269404 | None:intergenic | 30.0% | |
| CTATTGCTAATGCTGTATTT+GGG | - | chr6.2:1269927-1269946 | MS.gene053033:intron | 30.0% | |
| GTTACAGTTAATGAGATACT+AGG | - | chr6.2:1269620-1269639 | MS.gene053033:CDS | 30.0% | |
| TGCAAATGATTTCTTCTACT+TGG | - | chr6.2:1269550-1269569 | MS.gene053033:CDS | 30.0% | |
| TTTCAATTGAATGTTGGGTA+TGG | - | chr6.2:1269854-1269873 | MS.gene053033:intron | 30.0% | |
| !! | ATCACAAAAGTACTCAACAA+AGG | - | chr6.2:1269797-1269816 | MS.gene053033:intron | 30.0% |
| AGTATACATACCACCATTCT+TGG | + | chr6.2:1269318-1269337 | None:intergenic | 35.0% | |
| ATCAATGATACCAAGAATGG+TGG | - | chr6.2:1269305-1269324 | MS.gene053033:CDS | 35.0% | |
| CAACACTATAAGAATCTCAG+TGG | + | chr6.2:1269726-1269745 | None:intergenic | 35.0% | |
| CACTGAGATTCTTATAGTGT+TGG | - | chr6.2:1269724-1269743 | MS.gene053033:CDS | 35.0% | |
| GCTATCAATGATACCAAGAA+TGG | - | chr6.2:1269302-1269321 | MS.gene053033:CDS | 35.0% | |
| TCTTCAAAAACAATTCTGGG+TGG | - | chr6.2:1270018-1270037 | MS.gene053033:CDS | 35.0% | |
| TGAAAGTGAATGAGACCAAT+TGG | + | chr6.2:1269839-1269858 | None:intergenic | 35.0% | |
| TTAGCAATAGTGATTACACC+TGG | + | chr6.2:1269917-1269936 | None:intergenic | 35.0% | |
| ! | CCACACAAAAGTCTTGTAAA+GGG | + | chr6.2:1269283-1269302 | None:intergenic | 35.0% |
| ! | GAGATTCTTATAGTGTTGGA+GGG | - | chr6.2:1269728-1269747 | MS.gene053033:CDS | 35.0% |
| ! | TAGTGATTACACCTGGATTT+TGG | + | chr6.2:1269910-1269929 | None:intergenic | 35.0% |
| ! | TGAGATTCTTATAGTGTTGG+AGG | - | chr6.2:1269727-1269746 | MS.gene053033:CDS | 35.0% |
| ! | TGAGTACTTTTGTGATGAGA+CGG | + | chr6.2:1269793-1269812 | None:intergenic | 35.0% |
| ! | TGTTGTGCAGTTTTTGTGAA+TGG | - | chr6.2:1269497-1269516 | MS.gene053033:CDS | 35.0% |
| ! | TTCTTCTACTTGGTGAAAGA+AGG | - | chr6.2:1269560-1269579 | MS.gene053033:CDS | 35.0% |
| ACAAGATGCTAAAGCCAAGA+AGG | + | chr6.2:1269240-1269259 | None:intergenic | 40.0% | |
| ACTTGGTTCAAAAGTGACAC+CGG | - | chr6.2:1269598-1269617 | MS.gene053033:CDS | 40.0% | |
| ATAAGAATCTCAGTGGCTCT+AGG | + | chr6.2:1269719-1269738 | None:intergenic | 40.0% | |
| ATTGTCCACTTGGAAAGCTT+TGG | + | chr6.2:1269984-1270003 | None:intergenic | 40.0% | |
| CCAAGTGGACAATAACATAG+TGG | - | chr6.2:1269991-1270010 | MS.gene053033:CDS | 40.0% | |
| CCACTATGTTATTGTCCACT+TGG | + | chr6.2:1269994-1270013 | None:intergenic | 40.0% | |
| GATGTCTTCGTGTTTCCAAT+TGG | - | chr6.2:1269821-1269840 | MS.gene053033:intron | 40.0% | |
| TCATTTGCAGTAGCAAGCTT+TGG | + | chr6.2:1269539-1269558 | None:intergenic | 40.0% | |
| TGTGAATGGCAAATTCTGCA+AGG | - | chr6.2:1269511-1269530 | MS.gene053033:CDS | 40.0% | |
| ! | ACAAAAGTCTTGTAAAGGGC+TGG | + | chr6.2:1269279-1269298 | None:intergenic | 40.0% |
| ! | CAAAAGTCTTGTAAAGGGCT+GGG | + | chr6.2:1269278-1269297 | None:intergenic | 40.0% |
| ! | CCCTTTACAAGACTTTTGTG+TGG | - | chr6.2:1269280-1269299 | MS.gene053033:CDS | 40.0% |
| ! | GCCACACAAAAGTCTTGTAA+AGG | + | chr6.2:1269284-1269303 | None:intergenic | 40.0% |
| ! | TAAGAATCTCAGTGGCTCTA+GGG | + | chr6.2:1269718-1269737 | None:intergenic | 40.0% |
| ! | TTTGTGATGAGACGGTTTTC+TGG | + | chr6.2:1269785-1269804 | None:intergenic | 40.0% |
| !! | TTGGAGGGTACTCTTTATGT+CGG | - | chr6.2:1269743-1269762 | MS.gene053033:intron | 40.0% |
| CTTGTTTGTGACAGCCTTCT+TGG | - | chr6.2:1269223-1269242 | MS.gene053033:CDS | 45.0% | |
| GGAAACACGTCAAATCCACT+TGG | - | chr6.2:1269581-1269600 | MS.gene053033:CDS | 45.0% | |
| GGAAATGCAGTTGTCATTGC+TGG | - | chr6.2:1269875-1269894 | MS.gene053033:intron | 45.0% | |
| TCTCACCAAAGCTTTCCAAG+TGG | - | chr6.2:1269976-1269995 | MS.gene053033:CDS | 45.0% | |
| TTGTAAAGGGCTGGGATCAA+AGG | + | chr6.2:1269270-1269289 | None:intergenic | 45.0% | |
| !! | TGGAGGGTACTCTTTATGTC+GGG | - | chr6.2:1269744-1269763 | MS.gene053033:intron | 45.0% |
| !!! | GGTGTCACTTTTGAACCAAG+TGG | + | chr6.2:1269599-1269618 | None:intergenic | 45.0% |
| GGACTTAGCAGCCAAAATCC+AGG | - | chr6.2:1269896-1269915 | MS.gene053033:intron | 50.0% | |
| !! | TCGCATTGACTTCGCTGCTA+GGG | - | chr6.2:1269670-1269689 | MS.gene053033:CDS | 50.0% |
| AGGGCTGGGATCAAAGGCAA+AGG | + | chr6.2:1269264-1269283 | None:intergenic | 55.0% | |
| !! | CGCATTGACTTCGCTGCTAG+GGG | - | chr6.2:1269671-1269690 | MS.gene053033:CDS | 55.0% |
| !! | CTCGCATTGACTTCGCTGCT+AGG | - | chr6.2:1269669-1269688 | MS.gene053033:CDS | 55.0% |
| !! | GCTCTAGGGTGAGTATGTGG+AGG | + | chr6.2:1269704-1269723 | None:intergenic | 55.0% |
| !! | GTGGCTCTAGGGTGAGTATG+TGG | + | chr6.2:1269707-1269726 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 1269209 | 1270051 | 1269209 | ID=MS.gene053033 |
| chr6.2 | mRNA | 1269209 | 1270051 | 1269209 | ID=MS.gene053033.t1;Parent=MS.gene053033 |
| chr6.2 | exon | 1269934 | 1270051 | 1269934 | ID=MS.gene053033.t1.exon1;Parent=MS.gene053033.t1 |
| chr6.2 | CDS | 1269934 | 1270051 | 1269934 | ID=cds.MS.gene053033.t1;Parent=MS.gene053033.t1 |
| chr6.2 | exon | 1269209 | 1269753 | 1269209 | ID=MS.gene053033.t1.exon2;Parent=MS.gene053033.t1 |
| chr6.2 | CDS | 1269209 | 1269753 | 1269209 | ID=cds.MS.gene053033.t1;Parent=MS.gene053033.t1 |
| Gene Sequence |
| Protein sequence |
