Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67139.t1 | RHN77297.1 | 91.9 | 702 | 47 | 4 | 1 | 693 | 1 | 701 | 0.00E+00 | 1273.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67139.t1 | P85107 | 55.7 | 203 | 82 | 3 | 492 | 690 | 638 | 836 | 1.5e-60 | 235.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67139.t1 | A0A396JQF6 | 91.9 | 702 | 47 | 4 | 1 | 693 | 1 | 701 | 0.0e+00 | 1273.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene67139 | 0.804952 | 1.69E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene67139 | 0.80908 | 2.26E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene67139 | 0.808104 | 3.65E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene67139 | 0.815016 | 1.15E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene67139 | 0.806317 | 8.72E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene67139 | 0.8408 | 6.99E-58 | -1.69E-46 |
| MS.gene051791 | MS.gene67139 | 0.803294 | 3.73E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene67139 | -0.818341 | 2.06E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene67139 | 0.812399 | 4.32E-51 | -1.69E-46 |
| MS.gene053122 | MS.gene67139 | 0.806597 | 7.61E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene67139 | 0.838383 | 2.97E-57 | -1.69E-46 |
| MS.gene053541 | MS.gene67139 | 0.825543 | 4.43E-54 | -1.69E-46 |
| MS.gene053542 | MS.gene67139 | 0.830986 | 2.16E-55 | -1.69E-46 |
| MS.gene053599 | MS.gene67139 | 0.806378 | 8.47E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene67139 | 0.824016 | 1.01E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene67139 | 0.81963 | 1.05E-52 | -1.69E-46 |
| MS.gene055694 | MS.gene67139 | 0.844391 | 7.78E-59 | -1.69E-46 |
| MS.gene055808 | MS.gene67139 | 0.805824 | 1.11E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene67139 | 0.803406 | 3.54E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene67139 | 0.839957 | 1.16E-57 | -1.69E-46 |
| MS.gene056308 | MS.gene67139 | 0.808583 | 2.88E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene67139 | 0.812395 | 4.33E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene67139 | 0.801958 | 7.04E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene67139 | -0.80946 | 1.87E-50 | -1.69E-46 |
| MS.gene060355 | MS.gene67139 | 0.80554 | 1.27E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene67139 | 0.859878 | 3.05E-63 | -1.69E-46 |
| MS.gene060429 | MS.gene67139 | 0.805822 | 1.11E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene67139 | 0.80573 | 1.16E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67139.t1 | MTR_1g019290 | 91.595 | 702 | 49 | 4 | 1 | 693 | 1 | 701 | 0.0 | 1281 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67139.t1 | AT1G45231 | 48.537 | 410 | 161 | 6 | 286 | 690 | 160 | 524 | 6.47e-122 | 374 |
| MS.gene67139.t1 | AT1G30545 | 57.711 | 201 | 84 | 1 | 492 | 692 | 31 | 230 | 6.60e-82 | 259 |
| MS.gene67139.t1 | AT1G30550 | 57.000 | 200 | 85 | 1 | 492 | 691 | 19 | 217 | 2.65e-81 | 257 |
| MS.gene67139.t1 | AT1G30550 | 57.000 | 200 | 85 | 1 | 492 | 691 | 37 | 235 | 7.06e-81 | 257 |
| MS.gene67139.t1 | AT1G30545 | 52.101 | 119 | 56 | 1 | 574 | 692 | 2 | 119 | 4.24e-41 | 146 |
Find 160 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTCTCCCTCTTTCCTTTC+AGG | 0.117881 | 1.3:+4148667 | MS.gene67139:CDS |
| ATACAGATTGTGAGACTATT+TGG | 0.181236 | 1.3:+4150330 | MS.gene67139:CDS |
| TCAATTGATTGTGGTGAATT+TGG | 0.197179 | 1.3:+4150449 | MS.gene67139:CDS |
| CGTCTTGGCACCAAAGTTAA+AGG | 0.213662 | 1.3:+4153097 | MS.gene67139:CDS |
| GTGGAGAAAGTTCATTTAAA+TGG | 0.224358 | 1.3:+4156112 | MS.gene67139:CDS |
| TGGAGTCGCTGCTGGAAATT+TGG | 0.230378 | 1.3:+4150724 | MS.gene67139:CDS |
| GTGTTATGGGATACTTTCTA+TGG | 0.231393 | 1.3:+4150482 | MS.gene67139:CDS |
| TGTCACCAGCACCTGTTAAA+TGG | 0.276417 | 1.3:-4150238 | None:intergenic |
| CTACTCACCGTTGTGCAAAT+TGG | 0.278895 | 1.3:-4151757 | None:intergenic |
| GAGCAAACAAATGAATGAAT+TGG | 0.294987 | 1.3:+4148646 | MS.gene67139:CDS |
| TAAGATCAAAGTCACGGTTC+TGG | 0.303686 | 1.3:-4150175 | None:intergenic |
| TTGGAGATTGGATGGTGTTA+TGG | 0.306890 | 1.3:+4150468 | MS.gene67139:CDS |
| AGAATCACTTCCCATGAGTT+TGG | 0.319721 | 1.3:+4150397 | MS.gene67139:CDS |
| TGGTTGAAGTTGACATTTCT+TGG | 0.332160 | 1.3:-4155214 | None:intergenic |
| ATTGCACATGCCTCAGATAC+TGG | 0.337936 | 1.3:+4150200 | MS.gene67139:CDS |
| TCAGATTTACTATCCAATTC+AGG | 0.343225 | 1.3:-4151098 | None:intergenic |
| TCGTCTACCAAGGTTTCTTC+AGG | 0.344527 | 1.3:-4150659 | None:intergenic |
| AACTTTAGCACCTTTAACTT+TGG | 0.367248 | 1.3:-4153107 | None:intergenic |
| TGTCTTCCTATCTCCACCTT+GGG | 0.368653 | 1.3:+4154405 | MS.gene67139:CDS |
| TCATTTAGAGTTTCATCAAC+AGG | 0.375630 | 1.3:-4149915 | None:intergenic |
| TAGAAATGTGGACCAGTAAA+AGG | 0.376722 | 1.3:+4149846 | MS.gene67139:intron |
| ATTGTTGCAGAATAAGCTTC+AGG | 0.377435 | 1.3:-4151560 | None:intergenic |
| GGTAATTGATACGCCTGAAT+TGG | 0.379166 | 1.3:+4151085 | MS.gene67139:CDS |
| TGGAGATTGGATGGTGTTAT+GGG | 0.383342 | 1.3:+4150469 | MS.gene67139:CDS |
| TGAAGCTCTAAAGTCATTAG+AGG | 0.391197 | 1.3:+4150607 | MS.gene67139:CDS |
| TATACTATTAATTCTTTCCT+CGG | 0.394314 | 1.3:-4150129 | None:intergenic |
| AAGATCAAAGTCACGGTTCT+GGG | 0.395925 | 1.3:-4150174 | None:intergenic |
| ATTATCTTGTATATCAATGC+TGG | 0.397234 | 1.3:+4149995 | MS.gene67139:CDS |
| GTCGCAACCTTGGCATAATC+TGG | 0.408300 | 1.3:-4154433 | None:intergenic |
| GCTGAGATTGGAGTCGCTGC+TGG | 0.424048 | 1.3:+4150716 | MS.gene67139:CDS |
| CAAGGTTTGTGGGATAGAAC+TGG | 0.427058 | 1.3:+4150259 | MS.gene67139:CDS |
| GATCAAATTGACTTCATAGT+TGG | 0.427835 | 1.3:+4153065 | MS.gene67139:CDS |
| AGCAAACAAATGAATGAATT+GGG | 0.428976 | 1.3:+4148647 | MS.gene67139:CDS |
| AATACCTAACGACGTGATCC+AGG | 0.429384 | 1.3:-4150856 | None:intergenic |
| TCTGCTGGAAGCCATTTAAC+AGG | 0.439865 | 1.3:+4150227 | MS.gene67139:CDS |
| CTTCGGAAGATGGTTGAACT+TGG | 0.443338 | 1.3:-4148434 | None:intergenic |
| GATTCATCAAACCTCATTCC+TGG | 0.445751 | 1.3:+4148477 | MS.gene67139:CDS |
| TTGGTAGACGAGAACTTATC+AGG | 0.445848 | 1.3:+4150671 | MS.gene67139:CDS |
| TGCTGCACTGGGTTTGCTAA+TGG | 0.446709 | 1.3:+4150101 | MS.gene67139:CDS |
| ATTGTGGTGAATTTGGAGAT+TGG | 0.448835 | 1.3:+4150456 | MS.gene67139:CDS |
| ATGTCACCCAAGTCTTTCTC+TGG | 0.455587 | 1.3:+4148311 | MS.gene67139:CDS |
| GACTGTTTCACCGGCGCTGG+TGG | 0.456267 | 1.3:+4151725 | MS.gene67139:CDS |
| TCTACATGGGACCCACCCTC+AGG | 0.459782 | 1.3:+4150539 | MS.gene67139:CDS |
| GTTGCATATGACAGAGTTGA+TGG | 0.460248 | 1.3:+4150425 | MS.gene67139:CDS |
| AGTGATTCTGATTCGTTAGC+TGG | 0.461287 | 1.3:-4150383 | None:intergenic |
| AAATGTCAACTTCAACCAAT+TGG | 0.461325 | 1.3:+4155219 | MS.gene67139:CDS |
| GGGATGGAGTATCTAGCATT+TGG | 0.461901 | 1.3:+4150560 | MS.gene67139:CDS |
| GAAGAGTATTCAGCTGAGAT+TGG | 0.463111 | 1.3:+4150704 | MS.gene67139:CDS |
| GATAATTCAACATGCTGCAC+TGG | 0.465684 | 1.3:+4150089 | MS.gene67139:CDS |
| TTGTGATCAGCTTCGGAAGA+TGG | 0.482811 | 1.3:-4148444 | None:intergenic |
| TTCTTTGCCTGAAAGGAAAG+AGG | 0.484021 | 1.3:-4148674 | None:intergenic |
| TGATAATGTGCAATAATCTC+TGG | 0.484400 | 1.3:-4151671 | None:intergenic |
| ATACCCTGGATCACGTCGTT+AGG | 0.486600 | 1.3:+4150852 | MS.gene67139:CDS |
| TTATTCTCTAGATTTGATGA+TGG | 0.486790 | 1.3:+4151611 | MS.gene67139:CDS |
| TCAGATACTGGAATCTCTGC+TGG | 0.487274 | 1.3:+4150212 | MS.gene67139:CDS |
| AGTTGGTGACTTCTTCGTCT+TGG | 0.487348 | 1.3:+4153082 | MS.gene67139:CDS |
| ACAGTAATTGACTGTTTCAC+CGG | 0.491412 | 1.3:+4151716 | MS.gene67139:CDS |
| TGCAACCCCTTCCAAACTCA+TGG | 0.493145 | 1.3:-4150408 | None:intergenic |
| GTCCACCCCAAGGTGGAGAT+AGG | 0.493310 | 1.3:-4154411 | None:intergenic |
| TTTGCTCAATTCCAAATCCT+CGG | 0.493464 | 1.3:-4148630 | None:intergenic |
| ATTGTTGTTGTGATCAGCTT+CGG | 0.497624 | 1.3:-4148451 | None:intergenic |
| TTCCTTTCAGGCAAAGAATG+AGG | 0.501644 | 1.3:+4148679 | MS.gene67139:CDS |
| TACCTCATTCTTTGCCTGAA+AGG | 0.504941 | 1.3:-4148681 | None:intergenic |
| TACTCTGTTCAGTGTTGCTA+AGG | 0.505931 | 1.3:+4155162 | MS.gene67139:CDS |
| CATCTGAATGATGAAGAGAT+TGG | 0.506548 | 1.3:-4150775 | None:intergenic |
| ATTGACTGTTTCACCGGCGC+TGG | 0.506856 | 1.3:+4151722 | MS.gene67139:CDS |
| ATAGAGATAACTCTGCCAAT+TGG | 0.508750 | 1.3:-4155234 | None:intergenic |
| CTGTCTTCCTATCTCCACCT+TGG | 0.509970 | 1.3:+4154404 | MS.gene67139:CDS |
| TGAAGTTGACATTTCTTGGA+AGG | 0.517744 | 1.3:-4155210 | None:intergenic |
| CACTTCCCATGAGTTTGGAA+GGG | 0.519103 | 1.3:+4150402 | MS.gene67139:CDS |
| CTAGCATAATCAATCTTCAA+TGG | 0.520724 | 1.3:-4153014 | None:intergenic |
| TGGAAGGAACATGACAACTC+TGG | 0.528426 | 1.3:-4155194 | None:intergenic |
| TTATCTTGTATATCAATGCT+GGG | 0.528772 | 1.3:+4149996 | MS.gene67139:CDS |
| TTGCTCAATTCCAAATCCTC+GGG | 0.531412 | 1.3:-4148629 | None:intergenic |
| GCTGCAAGTACGTGGCTGCT+TGG | 0.531513 | 1.3:-4149889 | None:intergenic |
| TTCCTATCTCCACCTTGGGG+TGG | 0.532270 | 1.3:+4154409 | MS.gene67139:CDS |
| AGATACTCCATCCCTGAGGG+TGG | 0.532294 | 1.3:-4150551 | None:intergenic |
| TCACTTCCCATGAGTTTGGA+AGG | 0.534280 | 1.3:+4150401 | MS.gene67139:CDS |
| ACTTCCCATGAGTTTGGAAG+GGG | 0.538055 | 1.3:+4150403 | MS.gene67139:CDS |
| CACAGTAGGATGATTCACTT+TGG | 0.539774 | 1.3:-4150019 | None:intergenic |
| GGAAGCCATTTAACAGGTGC+TGG | 0.541054 | 1.3:+4150233 | MS.gene67139:CDS |
| TCAAAACAGACACTTCTACA+TGG | 0.541812 | 1.3:+4150525 | MS.gene67139:CDS |
| ACTGTTTCACCGGCGCTGGT+GGG | 0.542352 | 1.3:+4151726 | MS.gene67139:CDS |
| TGGTGAATTTGGAGATTGGA+TGG | 0.548165 | 1.3:+4150460 | MS.gene67139:CDS |
| TGGAGTATCTAGCATTTGGT+GGG | 0.549362 | 1.3:+4150564 | MS.gene67139:CDS |
| ATGGAGTATCTAGCATTTGG+TGG | 0.551877 | 1.3:+4150563 | MS.gene67139:CDS |
| GACATGGCTCAATCTGTCCC+TGG | 0.553310 | 1.3:+4150059 | MS.gene67139:CDS |
| CAATGCTTAGACCGCATGAT+GGG | 0.554402 | 1.3:+4154470 | MS.gene67139:CDS |
| AATAGCGGCGCCTTCATAGT+CGG | 0.558541 | 1.3:-4148266 | None:intergenic |
| TATCAAGCATCACGTTGTGC+AGG | 0.561730 | 1.3:+4151689 | MS.gene67139:CDS |
| ATAATTCAACATGCTGCACT+GGG | 0.561985 | 1.3:+4150090 | MS.gene67139:CDS |
| CAAACAACCTGAAGAAACCT+TGG | 0.563559 | 1.3:+4150652 | MS.gene67139:CDS |
| CATTGAAGATTGATTATGCT+AGG | 0.564121 | 1.3:+4153015 | MS.gene67139:CDS |
| GCTCAATCTGTCCCTGGTGA+AGG | 0.564856 | 1.3:+4150065 | MS.gene67139:CDS |
| ACGACGATGGTGCTGCCACT+TGG | 0.565157 | 1.3:+4150354 | MS.gene67139:CDS |
| GGTGCTGGTGACAAGGTTTG+TGG | 0.565223 | 1.3:+4150248 | MS.gene67139:CDS |
| CATATCATAAGTCGCAACCT+TGG | 0.565614 | 1.3:-4154443 | None:intergenic |
| TTTAACAGGTGCTGGTGACA+AGG | 0.566075 | 1.3:+4150241 | MS.gene67139:CDS |
| GATGGCATTCCCACCAGCGC+CGG | 0.573122 | 1.3:-4151735 | None:intergenic |
| CTCTATCTGCCTCTCCACCA+TGG | 0.573558 | 1.3:+4155251 | MS.gene67139:CDS |
| GGCGCCGCTATTCAATCTCT+CGG | 0.575015 | 1.3:+4148277 | MS.gene67139:CDS |
| GTGCTGGTGACAAGGTTTGT+GGG | 0.579936 | 1.3:+4150249 | MS.gene67139:CDS |
| CATTTAGAGTTTCATCAACA+GGG | 0.579943 | 1.3:-4149914 | None:intergenic |
| CTGTTCTGTATCAAATACCC+TGG | 0.582745 | 1.3:+4150838 | MS.gene67139:CDS |
| GTTGAATTATCTCCTTCACC+AGG | 0.585632 | 1.3:-4150077 | None:intergenic |
| TCTTTGCCTGAAAGGAAAGA+GGG | 0.587850 | 1.3:-4148673 | None:intergenic |
| ATGGGACCCACCCTCAGGGA+TGG | 0.588910 | 1.3:+4150544 | MS.gene67139:CDS |
| CAAAACAGACACTTCTACAT+GGG | 0.589849 | 1.3:+4150526 | MS.gene67139:CDS |
| GATACTCCATCCCTGAGGGT+GGG | 0.590428 | 1.3:-4150550 | None:intergenic |
| CTCTAGCGACCATGGTGGAG+AGG | 0.591857 | 1.3:-4155260 | None:intergenic |
| CTCTCCACCATGGTCGCTAG+AGG | 0.592850 | 1.3:+4155261 | MS.gene67139:CDS |
| TGTTATGGGATACTTTCTAT+GGG | 0.593869 | 1.3:+4150483 | MS.gene67139:CDS |
| GCATAATCTGGTCCACCCCA+AGG | 0.596449 | 1.3:-4154421 | None:intergenic |
| TCATACACCAACGGAAAACA+TGG | 0.596879 | 1.3:+4151064 | MS.gene67139:CDS |
| CAAGCATCACGTTGTGCAGG+TGG | 0.596897 | 1.3:+4151692 | MS.gene67139:CDS |
| GAAATTACCTCTAGCGACCA+TGG | 0.600107 | 1.3:-4155268 | None:intergenic |
| TAGTTACCAGAGAAAGACTT+GGG | 0.602158 | 1.3:-4148317 | None:intergenic |
| TCACCGTTGTGCAAATTGGA+TGG | 0.602384 | 1.3:-4151753 | None:intergenic |
| ATACCTAACGACGTGATCCA+GGG | 0.603439 | 1.3:-4150855 | None:intergenic |
| AAATGAAGTGAGTGCAGAGG+AGG | 0.606828 | 1.3:+4149932 | MS.gene67139:CDS |
| AGCAGAGATTCCAGTATCTG+AGG | 0.607282 | 1.3:-4150210 | None:intergenic |
| GCTAGATACTCCATCCCTGA+GGG | 0.607652 | 1.3:-4150554 | None:intergenic |
| ATCCTACTGTGATGGTGCAG+CGG | 0.609489 | 1.3:+4150031 | MS.gene67139:CDS |
| ATCACCGACTCCGACTATGA+AGG | 0.610202 | 1.3:+4148256 | MS.gene67139:CDS |
| ACAATGCTTAGACCGCATGA+TGG | 0.611631 | 1.3:+4154469 | MS.gene67139:CDS |
| GCAACCCCTTCCAAACTCAT+GGG | 0.614097 | 1.3:-4150407 | None:intergenic |
| TAATGCTGCTATTTATCGAG+TGG | 0.614197 | 1.3:+4153040 | MS.gene67139:CDS |
| CTACATGGGACCCACCCTCA+GGG | 0.614401 | 1.3:+4150540 | MS.gene67139:CDS |
| GTTTGCTAATGGTGTTTCCG+AGG | 0.615324 | 1.3:+4150112 | MS.gene67139:CDS |
| TGATAAGTTCTCGTCTACCA+AGG | 0.615470 | 1.3:-4150669 | None:intergenic |
| AGAAGCACTAGCCAGGAATG+AGG | 0.617387 | 1.3:-4148488 | None:intergenic |
| CTTGAGAGAACTAGTTGCAA+CGG | 0.617983 | 1.3:+4150803 | MS.gene67139:CDS |
| TGGTGCAGCGGAAGTTGACA+TGG | 0.618529 | 1.3:+4150043 | MS.gene67139:CDS |
| AAATTATATTATGAAACTGA+AGG | 0.620563 | 1.3:+4151173 | MS.gene67139:CDS |
| TTAGTTACCAGAGAAAGACT+TGG | 0.620694 | 1.3:-4148318 | None:intergenic |
| GGCGCCTTCATAGTCGGAGT+CGG | 0.622083 | 1.3:-4148260 | None:intergenic |
| AGAAAGTGAAAAGAAAACAC+AGG | 0.628636 | 1.3:+4151144 | MS.gene67139:CDS |
| TCTATCTTGTCATAGAAATG+TGG | 0.633490 | 1.3:+4149834 | MS.gene67139:intron |
| GTCTTCCTATCTCCACCTTG+GGG | 0.634884 | 1.3:+4154406 | MS.gene67139:CDS |
| AAGGTTTGTGGGATAGAACT+GGG | 0.636682 | 1.3:+4150260 | MS.gene67139:CDS |
| TTGCATATGACAGAGTTGAT+GGG | 0.643851 | 1.3:+4150426 | MS.gene67139:CDS |
| GGGTGGACCAGATTATGCCA+AGG | 0.644458 | 1.3:+4154426 | MS.gene67139:CDS |
| ATGTTACAGGTGCAGACATG+TGG | 0.644573 | 1.3:+4152974 | MS.gene67139:intron |
| ACAGGGTTGCTGCAAGTACG+TGG | 0.644966 | 1.3:-4149897 | None:intergenic |
| GTTGATGGGTCAATTGATTG+TGG | 0.650295 | 1.3:+4150440 | MS.gene67139:CDS |
| TCTAAATGAAGTGAGTGCAG+AGG | 0.654427 | 1.3:+4149929 | MS.gene67139:CDS |
| AGTGAATCATCCTACTGTGA+TGG | 0.656530 | 1.3:+4150023 | MS.gene67139:CDS |
| TTGAATTATCTCCTTCACCA+GGG | 0.659466 | 1.3:-4150076 | None:intergenic |
| TTCCGCTGCACCATCACAGT+AGG | 0.666655 | 1.3:-4150033 | None:intergenic |
| TGTCAGTCAAGCAACATCAG+AGG | 0.672169 | 1.3:+4151037 | MS.gene67139:intron |
| TGCTAGATACTCCATCCCTG+AGG | 0.677604 | 1.3:-4150555 | None:intergenic |
| ATGCCATCCAATTTGCACAA+CGG | 0.679134 | 1.3:+4151750 | MS.gene67139:CDS |
| AGAGGTCGATCATACACCAA+CGG | 0.685453 | 1.3:+4151055 | MS.gene67139:CDS |
| AAGTGAAAAGAAAACACAGG+CGG | 0.687466 | 1.3:+4151147 | MS.gene67139:CDS |
| TAATCTGGTCCACCCCAAGG+TGG | 0.694203 | 1.3:-4154418 | None:intergenic |
| GCATCTACCTACCCATCATG+CGG | 0.705552 | 1.3:-4154481 | None:intergenic |
| GTTAGCTGGCGACTGCCAAG+TGG | 0.706012 | 1.3:-4150369 | None:intergenic |
| GAGACTATTTGGAACGACGA+TGG | 0.720881 | 1.3:+4150341 | MS.gene67139:CDS |
| ATTACCTCTAGCGACCATGG+TGG | 0.725531 | 1.3:-4155265 | None:intergenic |
| AGAACCGAGAGATTGAATAG+CGG | 0.727660 | 1.3:-4148281 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 4148250 | 4156174 | 4148250 | ID=MS.gene67139 |
| chr1.3 | mRNA | 4148250 | 4156174 | 4148250 | ID=MS.gene67139.t1;Parent=MS.gene67139 |
| chr1.3 | exon | 4148250 | 4148332 | 4148250 | ID=MS.gene67139.t1.exon1;Parent=MS.gene67139.t1 |
| chr1.3 | CDS | 4148250 | 4148332 | 4148250 | ID=cds.MS.gene67139.t1;Parent=MS.gene67139.t1 |
| chr1.3 | exon | 4148422 | 4148498 | 4148422 | ID=MS.gene67139.t1.exon2;Parent=MS.gene67139.t1 |
| chr1.3 | CDS | 4148422 | 4148498 | 4148422 | ID=cds.MS.gene67139.t1;Parent=MS.gene67139.t1 |
| chr1.3 | exon | 4148606 | 4148700 | 4148606 | ID=MS.gene67139.t1.exon3;Parent=MS.gene67139.t1 |
| chr1.3 | CDS | 4148606 | 4148700 | 4148606 | ID=cds.MS.gene67139.t1;Parent=MS.gene67139.t1 |
| chr1.3 | exon | 4149849 | 4150873 | 4149849 | ID=MS.gene67139.t1.exon4;Parent=MS.gene67139.t1 |
| chr1.3 | CDS | 4149849 | 4150873 | 4149849 | ID=cds.MS.gene67139.t1;Parent=MS.gene67139.t1 |
| chr1.3 | exon | 4151043 | 4151194 | 4151043 | ID=MS.gene67139.t1.exon5;Parent=MS.gene67139.t1 |
| chr1.3 | CDS | 4151043 | 4151194 | 4151043 | ID=cds.MS.gene67139.t1;Parent=MS.gene67139.t1 |
| chr1.3 | exon | 4151540 | 4151771 | 4151540 | ID=MS.gene67139.t1.exon6;Parent=MS.gene67139.t1 |
| chr1.3 | CDS | 4151540 | 4151771 | 4151540 | ID=cds.MS.gene67139.t1;Parent=MS.gene67139.t1 |
| chr1.3 | exon | 4152983 | 4153118 | 4152983 | ID=MS.gene67139.t1.exon7;Parent=MS.gene67139.t1 |
| chr1.3 | CDS | 4152983 | 4153118 | 4152983 | ID=cds.MS.gene67139.t1;Parent=MS.gene67139.t1 |
| chr1.3 | exon | 4154397 | 4154491 | 4154397 | ID=MS.gene67139.t1.exon8;Parent=MS.gene67139.t1 |
| chr1.3 | CDS | 4154397 | 4154491 | 4154397 | ID=cds.MS.gene67139.t1;Parent=MS.gene67139.t1 |
| chr1.3 | exon | 4155159 | 4155282 | 4155159 | ID=MS.gene67139.t1.exon9;Parent=MS.gene67139.t1 |
| chr1.3 | CDS | 4155159 | 4155282 | 4155159 | ID=cds.MS.gene67139.t1;Parent=MS.gene67139.t1 |
| chr1.3 | exon | 4156112 | 4156174 | 4156112 | ID=MS.gene67139.t1.exon10;Parent=MS.gene67139.t1 |
| chr1.3 | CDS | 4156112 | 4156174 | 4156112 | ID=cds.MS.gene67139.t1;Parent=MS.gene67139.t1 |
| Gene Sequence |
| Protein sequence |
