Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71941.t1 | XP_003608721.1 | 97.5 | 241 | 6 | 0 | 1 | 241 | 1 | 241 | 1.80E-124 | 455.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71941.t1 | Q9SHC8 | 66.8 | 238 | 76 | 2 | 6 | 242 | 4 | 239 | 1.5e-84 | 313.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71941.t1 | G7JIX5 | 97.5 | 241 | 6 | 0 | 1 | 241 | 1 | 241 | 1.3e-124 | 455.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene71941 | 0.831157 | 1.96E-55 | -1.69E-46 |
| MS.gene049251 | MS.gene71941 | 0.833361 | 5.57E-56 | -1.69E-46 |
| MS.gene049596 | MS.gene71941 | 0.809763 | 1.61E-50 | -1.69E-46 |
| MS.gene050071 | MS.gene71941 | 0.821897 | 3.16E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene71941 | -0.819146 | 1.35E-52 | -1.69E-46 |
| MS.gene050496 | MS.gene71941 | -0.804174 | 2.45E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene71941 | -0.801994 | 6.92E-49 | -1.69E-46 |
| MS.gene050818 | MS.gene71941 | 0.846125 | 2.64E-59 | -1.69E-46 |
| MS.gene050894 | MS.gene71941 | 0.87177 | 5.31E-67 | -1.69E-46 |
| MS.gene05124 | MS.gene71941 | 0.803676 | 3.11E-49 | -1.69E-46 |
| MS.gene052494 | MS.gene71941 | 0.841709 | 4.03E-58 | -1.69E-46 |
| MS.gene05470 | MS.gene71941 | -0.836041 | 1.18E-56 | -1.69E-46 |
| MS.gene055251 | MS.gene71941 | 0.832927 | 7.15E-56 | -1.69E-46 |
| MS.gene055331 | MS.gene71941 | 0.817813 | 2.71E-52 | -1.69E-46 |
| MS.gene055719 | MS.gene71941 | 0.809039 | 2.30E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene71941 | -0.832355 | 9.91E-56 | -1.69E-46 |
| MS.gene056266 | MS.gene71941 | -0.822681 | 2.08E-53 | -1.69E-46 |
| MS.gene060076 | MS.gene71941 | 0.851242 | 1.01E-60 | -1.69E-46 |
| MS.gene060077 | MS.gene71941 | 0.803073 | 4.15E-49 | -1.69E-46 |
| MS.gene060359 | MS.gene71941 | 0.805354 | 1.39E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene71941 | -0.818642 | 1.76E-52 | -1.69E-46 |
| MS.gene061044 | MS.gene71941 | 0.842871 | 1.98E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71941.t1 | MTR_4g101020 | 97.107 | 242 | 7 | 0 | 1 | 242 | 1 | 242 | 4.16e-176 | 483 |
| MS.gene71941.t1 | MTR_5g012420 | 76.033 | 242 | 58 | 0 | 1 | 242 | 2 | 243 | 8.97e-136 | 382 |
| MS.gene71941.t1 | MTR_4g027050 | 63.866 | 238 | 85 | 1 | 5 | 242 | 4 | 240 | 1.60e-114 | 328 |
| MS.gene71941.t1 | MTR_5g012420 | 71.930 | 171 | 48 | 0 | 72 | 242 | 1 | 171 | 3.34e-86 | 253 |
| MS.gene71941.t1 | MTR_4g026830 | 49.282 | 209 | 84 | 5 | 4 | 206 | 21 | 213 | 1.73e-58 | 184 |
| MS.gene71941.t1 | MTR_4g026620 | 48.077 | 208 | 76 | 3 | 4 | 211 | 15 | 190 | 2.30e-58 | 184 |
| MS.gene71941.t1 | MTR_4g118760 | 39.446 | 289 | 120 | 5 | 6 | 239 | 4 | 292 | 8.19e-58 | 186 |
| MS.gene71941.t1 | MTR_4g026650 | 63.200 | 125 | 46 | 0 | 4 | 128 | 21 | 145 | 3.00e-53 | 170 |
| MS.gene71941.t1 | MTR_5g013320 | 42.105 | 209 | 92 | 2 | 7 | 215 | 6 | 185 | 5.11e-51 | 166 |
| MS.gene71941.t1 | MTR_0135s0080 | 61.600 | 125 | 48 | 0 | 4 | 128 | 20 | 144 | 2.34e-50 | 162 |
| MS.gene71941.t1 | MTR_4g118760 | 56.028 | 141 | 62 | 0 | 6 | 146 | 4 | 144 | 4.21e-50 | 166 |
| MS.gene71941.t1 | MTR_4g026780 | 61.600 | 125 | 48 | 0 | 4 | 128 | 20 | 144 | 4.23e-50 | 162 |
| MS.gene71941.t1 | MTR_4g026780 | 61.600 | 125 | 48 | 0 | 4 | 128 | 20 | 144 | 5.19e-50 | 162 |
| MS.gene71941.t1 | MTR_4g026780 | 61.600 | 125 | 48 | 0 | 4 | 128 | 20 | 144 | 5.97e-50 | 162 |
| MS.gene71941.t1 | MTR_4g026780 | 61.600 | 125 | 48 | 0 | 4 | 128 | 20 | 144 | 3.64e-49 | 161 |
| MS.gene71941.t1 | MTR_4g026780 | 61.600 | 125 | 48 | 0 | 4 | 128 | 20 | 144 | 3.69e-49 | 162 |
| MS.gene71941.t1 | MTR_1g081950 | 40.704 | 199 | 112 | 2 | 7 | 205 | 6 | 198 | 3.37e-43 | 151 |
| MS.gene71941.t1 | MTR_4g026540 | 49.206 | 189 | 69 | 3 | 19 | 206 | 26 | 188 | 1.92e-41 | 140 |
| MS.gene71941.t1 | MTR_0753s0030 | 61.250 | 80 | 28 | 2 | 20 | 96 | 1 | 80 | 2.15e-26 | 98.6 |
| MS.gene71941.t1 | MTR_4g099440 | 31.081 | 148 | 72 | 3 | 82 | 228 | 1 | 119 | 1.04e-17 | 77.4 |
| MS.gene71941.t1 | MTR_1g081950 | 36.559 | 93 | 56 | 1 | 72 | 164 | 1 | 90 | 1.09e-12 | 67.0 |
| MS.gene71941.t1 | MTR_2g089995 | 31.967 | 122 | 76 | 2 | 12 | 129 | 87 | 205 | 4.50e-11 | 61.6 |
| MS.gene71941.t1 | MTR_2g089995 | 31.967 | 122 | 76 | 2 | 12 | 129 | 87 | 205 | 6.79e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71941.t1 | AT2G45140 | 66.527 | 239 | 77 | 2 | 5 | 242 | 3 | 239 | 2.45e-108 | 312 |
| MS.gene71941.t1 | AT3G60600 | 63.750 | 240 | 84 | 2 | 4 | 242 | 19 | 256 | 3.64e-101 | 295 |
| MS.gene71941.t1 | AT2G45140 | 63.180 | 239 | 68 | 3 | 5 | 242 | 3 | 222 | 5.42e-99 | 288 |
| MS.gene71941.t1 | AT4G00170 | 59.833 | 239 | 90 | 4 | 5 | 241 | 4 | 238 | 2.79e-92 | 271 |
| MS.gene71941.t1 | AT3G60600 | 72.956 | 159 | 41 | 1 | 4 | 162 | 19 | 175 | 3.76e-83 | 248 |
| MS.gene71941.t1 | AT3G60600 | 67.797 | 177 | 49 | 2 | 4 | 180 | 19 | 187 | 2.10e-82 | 246 |
| MS.gene71941.t1 | AT4G00170 | 57.674 | 215 | 85 | 4 | 29 | 241 | 1 | 211 | 4.28e-77 | 232 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 5.42e-68 | 214 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 5.42e-68 | 214 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 5.42e-68 | 214 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 5.42e-68 | 214 |
| MS.gene71941.t1 | AT1G51270 | 63.057 | 157 | 57 | 1 | 1 | 157 | 1 | 156 | 7.62e-68 | 213 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 7.58e-67 | 214 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 175 | 326 | 1.06e-65 | 213 |
| MS.gene71941.t1 | AT1G51270 | 57.962 | 157 | 65 | 1 | 1 | 157 | 1 | 156 | 4.81e-59 | 195 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 175 | 326 | 1.06e-65 | 213 |
| MS.gene71941.t1 | AT1G51270 | 57.962 | 157 | 65 | 1 | 1 | 157 | 1 | 156 | 4.81e-59 | 195 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 175 | 326 | 2.43e-65 | 213 |
| MS.gene71941.t1 | AT1G51270 | 57.962 | 157 | 65 | 1 | 1 | 157 | 1 | 156 | 8.98e-59 | 195 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 127 | 278 | 3.01e-65 | 213 |
| MS.gene71941.t1 | AT1G51270 | 58.879 | 107 | 44 | 0 | 51 | 157 | 2 | 108 | 3.30e-38 | 140 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 127 | 278 | 3.01e-65 | 213 |
| MS.gene71941.t1 | AT1G51270 | 58.879 | 107 | 44 | 0 | 51 | 157 | 2 | 108 | 3.30e-38 | 140 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 127 | 278 | 3.01e-65 | 213 |
| MS.gene71941.t1 | AT1G51270 | 58.879 | 107 | 44 | 0 | 51 | 157 | 2 | 108 | 3.30e-38 | 140 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 127 | 278 | 3.01e-65 | 213 |
| MS.gene71941.t1 | AT1G51270 | 58.879 | 107 | 44 | 0 | 51 | 157 | 2 | 108 | 3.30e-38 | 140 |
| MS.gene71941.t1 | AT1G51270 | 63.158 | 152 | 56 | 0 | 6 | 157 | 175 | 326 | 7.17e-65 | 213 |
| MS.gene71941.t1 | AT1G51270 | 57.962 | 157 | 65 | 1 | 1 | 157 | 1 | 156 | 2.38e-58 | 195 |
| MS.gene71941.t1 | AT5G47180 | 41.909 | 241 | 107 | 5 | 4 | 242 | 6 | 215 | 5.03e-60 | 189 |
| MS.gene71941.t1 | AT5G47180 | 41.909 | 241 | 107 | 5 | 4 | 242 | 6 | 215 | 5.03e-60 | 189 |
| MS.gene71941.t1 | AT2G23830 | 65.323 | 124 | 43 | 0 | 4 | 127 | 3 | 126 | 1.43e-56 | 177 |
| MS.gene71941.t1 | AT1G08820 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.56e-44 | 153 |
| MS.gene71941.t1 | AT1G08820 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.56e-44 | 153 |
| MS.gene71941.t1 | AT1G08820 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.56e-44 | 153 |
| MS.gene71941.t1 | AT1G08820 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.56e-44 | 153 |
| MS.gene71941.t1 | AT1G08820 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.56e-44 | 153 |
| MS.gene71941.t1 | AT1G51270 | 63.953 | 86 | 31 | 0 | 72 | 157 | 1 | 86 | 3.26e-32 | 121 |
| MS.gene71941.t1 | AT4G05060 | 31.387 | 137 | 86 | 3 | 3 | 134 | 95 | 228 | 1.54e-12 | 66.2 |
| MS.gene71941.t1 | AT4G21450 | 31.496 | 127 | 79 | 3 | 8 | 129 | 108 | 231 | 1.72e-12 | 65.9 |
Find 60 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATCTACCTGCGATGTTA+TGG | 0.307994 | 8.3:-20121515 | MS.gene71941:CDS |
| GACCCTTCCTCAGAACCTTC+TGG | 0.314635 | 8.3:+20121099 | None:intergenic |
| TTTATAATTGTCATATTAAT+CGG | 0.319180 | 8.3:-20118554 | MS.gene71941:CDS |
| ATATCCGCAGAGATATCTTT+TGG | 0.319733 | 8.3:+20121307 | None:intergenic |
| GGACCCACTTGTGCGAATTC+AGG | 0.322000 | 8.3:+20121033 | None:intergenic |
| GAAAATTATCGTTACCTTGA+AGG | 0.356059 | 8.3:+20121824 | None:intergenic |
| CTTATCCTTGCATTGCATAT+CGG | 0.361379 | 8.3:+20121369 | None:intergenic |
| TGATAGCTATGTTGCCTTCA+AGG | 0.365195 | 8.3:-20121838 | MS.gene71941:intron |
| AGTGAATCCTCACCAGTTCC+TGG | 0.373384 | 8.3:+20118941 | None:intergenic |
| GGGACGAACACAATACTTCC+TGG | 0.379716 | 8.3:+20121558 | None:intergenic |
| AAAAGATATCTCTGCGGATA+TGG | 0.390900 | 8.3:-20121305 | MS.gene71941:intron |
| GTCATATTAATCGGCTTACT+TGG | 0.400261 | 8.3:-20118545 | MS.gene71941:CDS |
| CGGCTTACTTGGCGTAATCA+TGG | 0.416267 | 8.3:-20118534 | MS.gene71941:CDS |
| TAGCAGGCTCCGCCAGGAAC+TGG | 0.424265 | 8.3:-20118953 | MS.gene71941:intron |
| ACCCTTCCTCAGAACCTTCT+GGG | 0.431309 | 8.3:+20121100 | None:intergenic |
| GGCAAGACAATTCCAGTGTT+GGG | 0.435557 | 8.3:+20121538 | None:intergenic |
| AGATCTACCTGCGATGTTAT+GGG | 0.436395 | 8.3:-20121514 | MS.gene71941:intron |
| TCCTCAGAACCTTCTGGGAC+TGG | 0.457111 | 8.3:+20121105 | None:intergenic |
| ATAACATCGCAGGTAGATCT+TGG | 0.463396 | 8.3:+20121517 | None:intergenic |
| GGGACTGGAGATGGTGGTTG+CGG | 0.477331 | 8.3:+20121120 | None:intergenic |
| GGCTTACTTGGCGTAATCAT+GGG | 0.479720 | 8.3:-20118533 | MS.gene71941:CDS |
| GCAGATTTGTCTTGAGCCAC+AGG | 0.481466 | 8.3:+20120902 | None:intergenic |
| TCCTTGCATTGCATATCGGC+TGG | 0.482696 | 8.3:+20121373 | None:intergenic |
| GCTTAGTTCAACAAGGAGGC+AGG | 0.499365 | 8.3:-20121189 | MS.gene71941:intron |
| TGGCAAGACAATTCCAGTGT+TGG | 0.505017 | 8.3:+20121537 | None:intergenic |
| GAACCTTCTGGGACTGGAGA+TGG | 0.512445 | 8.3:+20121111 | None:intergenic |
| GGACGAACACAATACTTCCT+GGG | 0.526313 | 8.3:+20121559 | None:intergenic |
| ATGCAATTCAACAAACTAGC+AGG | 0.535469 | 8.3:-20118969 | MS.gene71941:CDS |
| ACAAACTAGCAGGCTCCGCC+AGG | 0.538008 | 8.3:-20118959 | MS.gene71941:CDS |
| ACTGGAGATGGTGGTTGCGG+CGG | 0.540247 | 8.3:+20121123 | None:intergenic |
| AGGTGAAAACAACGAATCCC+AGG | 0.543965 | 8.3:-20121576 | MS.gene71941:CDS |
| TATTGTGTTCGTCCCAACAC+TGG | 0.549323 | 8.3:-20121550 | MS.gene71941:CDS |
| CGGGATTGCTTAGTTCAACA+AGG | 0.549410 | 8.3:-20121196 | MS.gene71941:intron |
| GTCCCAGAAGGTTCTGAGGA+AGG | 0.549939 | 8.3:-20121102 | MS.gene71941:CDS |
| GGAGGCAGGACATGTGGTCG+AGG | 0.551010 | 8.3:-20121175 | MS.gene71941:CDS |
| GTTCGAGAGGTTCGATGCTG+AGG | 0.558096 | 8.3:+20122006 | None:intergenic |
| TCCCAGAAGGTTCTGAGGAA+GGG | 0.560679 | 8.3:-20121101 | MS.gene71941:CDS |
| CAGGGGAACTTGAGTTCGAG+AGG | 0.576125 | 8.3:+20121993 | None:intergenic |
| CCTTCTGGGACTGGAGATGG+TGG | 0.580395 | 8.3:+20121114 | None:intergenic |
| GATGCTGAGGAGATCACCAT+CGG | 0.583008 | 8.3:+20122019 | None:intergenic |
| TCCAGCCGATATGCAATGCA+AGG | 0.588712 | 8.3:-20121374 | MS.gene71941:CDS |
| TTGTGCGAATTCAGGACCAC+TGG | 0.590490 | 8.3:+20121041 | None:intergenic |
| GGGATATTTCAGGTAACAAG+AGG | 0.592637 | 8.3:-20120938 | MS.gene71941:intron |
| ATCCGTACCCATAACATCGC+AGG | 0.597634 | 8.3:+20121507 | None:intergenic |
| AGGCAAGAGCTCTTATCTCA+AGG | 0.599068 | 8.3:-20119011 | MS.gene71941:CDS |
| AGGATCTGCTGAACGACCTG+TGG | 0.602071 | 8.3:-20120918 | MS.gene71941:CDS |
| ATGCTGAGGAGATCACCATC+GGG | 0.602500 | 8.3:+20122020 | None:intergenic |
| TCAGAAAATGGAAATGCCAG+TGG | 0.609259 | 8.3:-20121057 | MS.gene71941:CDS |
| TAGGAGCTGCTGAAGCGTGA+AGG | 0.615403 | 8.3:-20118602 | MS.gene71941:CDS |
| TCCAGTCCCAGAAGGTTCTG+AGG | 0.617607 | 8.3:-20121106 | MS.gene71941:CDS |
| CAACAAGGAGGCAGGACATG+TGG | 0.633592 | 8.3:-20121181 | MS.gene71941:CDS |
| CCACCATCTCCAGTCCCAGA+AGG | 0.633985 | 8.3:-20121114 | MS.gene71941:CDS |
| TACTCAGAGATGAGTCCCGA+TGG | 0.636351 | 8.3:-20122035 | None:intergenic |
| GCTTACTTGGCGTAATCATG+GGG | 0.641142 | 8.3:-20118532 | MS.gene71941:CDS |
| GGCTCAAGACAAATCTGCAG+AGG | 0.648897 | 8.3:-20120897 | MS.gene71941:intron |
| GAGGAAGGGTCATCCCCTAG+AGG | 0.683330 | 8.3:-20121087 | MS.gene71941:CDS |
| CGAGGAGTGCAAATTGAGAG+TGG | 0.686274 | 8.3:-20121157 | MS.gene71941:CDS |
| GAATCCTCACCAGTTCCTGG+CGG | 0.725681 | 8.3:+20118944 | None:intergenic |
| GATTGCTTAGTTCAACAAGG+AGG | 0.758050 | 8.3:-20121193 | MS.gene71941:intron |
| CAGTCCAAAAGATATCTCTG+CGG | 0.763749 | 8.3:-20121311 | MS.gene71941:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAATTGTCATATTAAT+CGG | - | chr8.3:20121983-20122002 | MS.gene71941:intron | 10.0% |
| !! | ATTTAATTATAACAGAACAT+TGG | - | chr8.3:20119804-20119823 | MS.gene71941:intron | 15.0% |
| !! | TTTAATTATAACAGAACATT+GGG | - | chr8.3:20119805-20119824 | MS.gene71941:intron | 15.0% |
| !!! | ATTGTATTTTGATTTTGTTT+AGG | - | chr8.3:20118941-20118960 | MS.gene71941:intron | 15.0% |
| !!! | TTTTATTTTCAATCTACAAA+AGG | - | chr8.3:20121034-20121053 | MS.gene71941:intron | 15.0% |
| !! | AGATATTCTTGTATGAAAAA+AGG | + | chr8.3:20119558-20119577 | None:intergenic | 20.0% |
| !! | ATGTAATGTAAATATTACGA+AGG | + | chr8.3:20121170-20121189 | None:intergenic | 20.0% |
| !! | ATTTAGTTGTGATAATTAGT+AGG | - | chr8.3:20120091-20120110 | MS.gene71941:intron | 20.0% |
| !! | CAACAAACAGTTATATAAAT+TGG | + | chr8.3:20120811-20120830 | None:intergenic | 20.0% |
| !! | CAATTTATATAACTGTTTGT+TGG | - | chr8.3:20120809-20120828 | MS.gene71941:intron | 20.0% |
| !! | GAAAAGCTTAAATATGTATT+GGG | + | chr8.3:20121265-20121284 | None:intergenic | 20.0% |
| !! | TAAAATTCATATTTGGAAGT+TGG | + | chr8.3:20121011-20121030 | None:intergenic | 20.0% |
| !! | TACATTCTATTAAAATAGTG+AGG | - | chr8.3:20121185-20121204 | MS.gene71941:CDS | 20.0% |
| !! | TGAAAAGCTTAAATATGTAT+TGG | + | chr8.3:20121266-20121285 | None:intergenic | 20.0% |
| !! | TGAATGAATTTATTACTTGT+AGG | - | chr8.3:20121916-20121935 | MS.gene71941:intron | 20.0% |
| !! | TTAATTATAACAGAACATTG+GGG | - | chr8.3:20119806-20119825 | MS.gene71941:intron | 20.0% |
| !! | TTTAAAAACTCACATGTTAA+AGG | - | chr8.3:20121238-20121257 | MS.gene71941:intron | 20.0% |
| !! | TTTAGTTGTGATAATTAGTA+GGG | - | chr8.3:20120092-20120111 | MS.gene71941:intron | 20.0% |
| !!! | AACATGTGAGTTTTTAAAAT+TGG | + | chr8.3:20121236-20121255 | None:intergenic | 20.0% |
| !!! | ACTTAATGTAAGGATATTTT+AGG | - | chr8.3:20120490-20120509 | MS.gene71941:intron | 20.0% |
| !!! | GAGTGTTTTAAAACTTATTA+AGG | - | chr8.3:20120570-20120589 | MS.gene71941:intron | 20.0% |
| !!! | TATGTATTGCTACTATTTTA+TGG | - | chr8.3:20121767-20121786 | MS.gene71941:intron | 20.0% |
| !!! | TTTTAAAACACTCCAATATT+GGG | + | chr8.3:20120563-20120582 | None:intergenic | 20.0% |
| ! | AATTAAAATGAGATGAGAGT+GGG | - | chr8.3:20119934-20119953 | MS.gene71941:intron | 25.0% |
| ! | AATTTGTGACACTTAATGTA+AGG | - | chr8.3:20120480-20120499 | MS.gene71941:intron | 25.0% |
| ! | ACTCAGACTTAATTTCAAAT+TGG | - | chr8.3:20121208-20121227 | MS.gene71941:intron | 25.0% |
| ! | ATGTGTTTATAAAATCCTAG+AGG | + | chr8.3:20120521-20120540 | None:intergenic | 25.0% |
| ! | ATGTTGAAAGAATCATTTGA+TGG | + | chr8.3:20121868-20121887 | None:intergenic | 25.0% |
| ! | ATTCTTGTATGAAAAAAGGT+AGG | + | chr8.3:20119554-20119573 | None:intergenic | 25.0% |
| ! | CTCAGACTTAATTTCAAATT+GGG | - | chr8.3:20121209-20121228 | MS.gene71941:intron | 25.0% |
| ! | CTTACTCTTAAGTAACTAAA+AGG | + | chr8.3:20119860-20119879 | None:intergenic | 25.0% |
| ! | GATTCTTTCAACATTAGTTA+TGG | - | chr8.3:20121874-20121893 | MS.gene71941:CDS | 25.0% |
| ! | TAAACACAAGTGAAAAGAAA+CGG | + | chr8.3:20119077-20119096 | None:intergenic | 25.0% |
| ! | TATTTATGACTTAACGATCA+TGG | - | chr8.3:20121354-20121373 | MS.gene71941:CDS | 25.0% |
| ! | TTGAAAATGCAAAATTTGAG+TGG | - | chr8.3:20118913-20118932 | MS.gene71941:intron | 25.0% |
| !! | AACAGAAATAAAAAGAGCAT+TGG | - | chr8.3:20120036-20120055 | MS.gene71941:intron | 25.0% |
| !! | GTTTTTGATAGAAAAGTCTA+TGG | - | chr8.3:20121704-20121723 | MS.gene71941:intron | 25.0% |
| !! | TATTGCTACTATTTTATGGA+GGG | - | chr8.3:20121771-20121790 | MS.gene71941:intron | 25.0% |
| !! | TTTAAAACACTCCAATATTG+GGG | + | chr8.3:20120562-20120581 | None:intergenic | 25.0% |
| !!! | ACTATTTTTTTCTCATGCTA+TGG | + | chr8.3:20120984-20121003 | None:intergenic | 25.0% |
| !!! | AGTTGTTTTGTTCAATTTCT+AGG | + | chr8.3:20120618-20120637 | None:intergenic | 25.0% |
| !!! | ATTACTGACTCTAAAATTAC+AGG | + | chr8.3:20121468-20121487 | None:intergenic | 25.0% |
| !!! | ATTGGTTTTCTCAAATACTA+AGG | - | chr8.3:20120054-20120073 | MS.gene71941:intron | 25.0% |
| !!! | CTATTTTTTTCTCATGCTAT+GGG | + | chr8.3:20120983-20121002 | None:intergenic | 25.0% |
| !!! | GTTTTAAAACACTCCAATAT+TGG | + | chr8.3:20120564-20120583 | None:intergenic | 25.0% |
| !!! | TTGGTTTTCTCAAATACTAA+GGG | - | chr8.3:20120055-20120074 | MS.gene71941:intron | 25.0% |
| !!! | TTTTGTTCAATTTCTAGGAA+TGG | + | chr8.3:20120613-20120632 | None:intergenic | 25.0% |
| AAAATGACGAAAATCATTCG+TGG | + | chr8.3:20118889-20118908 | None:intergenic | 30.0% | |
| AAAGGAAATGGAAACTTACA+GGG | + | chr8.3:20118565-20118584 | None:intergenic | 30.0% | |
| AACATTGCGAAAAAACTAAC+AGG | + | chr8.3:20118860-20118879 | None:intergenic | 30.0% | |
| AACTAAAACAGGACAAGTTA+AGG | + | chr8.3:20119528-20119547 | None:intergenic | 30.0% | |
| AAGACAGTTGCAAAGTATAA+CGG | - | chr8.3:20119877-20119896 | MS.gene71941:intron | 30.0% | |
| AATAAAGTAAACAACCCTTG+TGG | + | chr8.3:20121338-20121357 | None:intergenic | 30.0% | |
| ACAACTAATCAACTGTTAGT+TGG | - | chr8.3:20119901-20119920 | MS.gene71941:intron | 30.0% | |
| ACATTGCGAAAAAACTAACA+GGG | + | chr8.3:20118859-20118878 | None:intergenic | 30.0% | |
| AGAAAAGGGAGAAATAATTG+TGG | - | chr8.3:20121398-20121417 | MS.gene71941:CDS | 30.0% | |
| AGAATTCAATGAGTTCAACT+GGG | + | chr8.3:20119730-20119749 | None:intergenic | 30.0% | |
| ATTAAAATGAGATGAGAGTG+GGG | - | chr8.3:20119935-20119954 | MS.gene71941:intron | 30.0% | |
| CATGGTTTAAATATCCACAA+GGG | - | chr8.3:20121321-20121340 | MS.gene71941:CDS | 30.0% | |
| GAAAAATGGAAAGAGATCAA+AGG | + | chr8.3:20118583-20118602 | None:intergenic | 30.0% | |
| GAAAATTATCGTTACCTTGA+AGG | + | chr8.3:20118716-20118735 | None:intergenic | 30.0% | |
| GAACCAAACATACCATATAA+GGG | + | chr8.3:20120357-20120376 | None:intergenic | 30.0% | |
| GAATTAAAATGAGATGAGAG+TGG | - | chr8.3:20119933-20119952 | MS.gene71941:intron | 30.0% | |
| TCATATATCATGGGTATGTT+TGG | - | chr8.3:20120188-20120207 | MS.gene71941:intron | 30.0% | |
| TCATGGTTTAAATATCCACA+AGG | - | chr8.3:20121320-20121339 | MS.gene71941:CDS | 30.0% | |
| TGAACCAAACATACCATATA+AGG | + | chr8.3:20120358-20120377 | None:intergenic | 30.0% | |
| TTAAAACACTCCAATATTGG+GGG | + | chr8.3:20120561-20120580 | None:intergenic | 30.0% | |
| ! | AAAAATATCAAGGCATCTAG+GGG | + | chr8.3:20121072-20121091 | None:intergenic | 30.0% |
| ! | AAAGCTGATGGATAATTTCA+TGG | - | chr8.3:20121303-20121322 | MS.gene71941:intron | 30.0% |
| ! | ATGGATTTTCAGTCTGAATA+GGG | - | chr8.3:20121672-20121691 | MS.gene71941:intron | 30.0% |
| ! | ATTGCTACTATTTTATGGAG+GGG | - | chr8.3:20121772-20121791 | MS.gene71941:intron | 30.0% |
| ! | CAAAAATATCAAGGCATCTA+GGG | + | chr8.3:20121073-20121092 | None:intergenic | 30.0% |
| ! | GTATTGCTACTATTTTATGG+AGG | - | chr8.3:20121770-20121789 | MS.gene71941:intron | 30.0% |
| ! | GTGGTTATCTGTTTTCTTTT+TGG | - | chr8.3:20121417-20121436 | MS.gene71941:intron | 30.0% |
| ! | TGGTATTTGGAAAAGCATAA+CGG | - | chr8.3:20121374-20121393 | MS.gene71941:CDS | 30.0% |
| ! | TTACGCTCATGAATTTTTGT+AGG | - | chr8.3:20119768-20119787 | MS.gene71941:intron | 30.0% |
| ! | TTTCTGAAAAAGAACCTCTA+GGG | + | chr8.3:20119467-20119486 | None:intergenic | 30.0% |
| ! | TTTTCTTCTTGGGATATTTC+AGG | - | chr8.3:20119589-20119608 | MS.gene71941:intron | 30.0% |
| !! | CTGCCATTTGTTTTCTATTA+GGG | - | chr8.3:20121814-20121833 | MS.gene71941:intron | 30.0% |
| !! | GATCTCTTTCCATTTTTCTA+GGG | - | chr8.3:20118585-20118604 | MS.gene71941:CDS | 30.0% |
| !! | TCTGCCATTTGTTTTCTATT+AGG | - | chr8.3:20121813-20121832 | MS.gene71941:intron | 30.0% |
| !! | TGATCTCTTTCCATTTTTCT+AGG | - | chr8.3:20118584-20118603 | MS.gene71941:CDS | 30.0% |
| !! | TGCCATTTGTTTTCTATTAG+GGG | - | chr8.3:20121815-20121834 | MS.gene71941:intron | 30.0% |
| !! | TTTTCTGAAAAAGAACCTCT+AGG | + | chr8.3:20119468-20119487 | None:intergenic | 30.0% |
| !!! | AGAGGTTCTTTTTCAGAAAA+TGG | - | chr8.3:20119468-20119487 | MS.gene71941:intron | 30.0% |
| !!! | ATTGAGATGCTTTTTCTTCT+TGG | - | chr8.3:20119578-20119597 | MS.gene71941:intron | 30.0% |
| !!! | TGTTAGTTTTTTCGCAATGT+TGG | - | chr8.3:20118859-20118878 | MS.gene71941:intron | 30.0% |
| !!! | TTGAGATGCTTTTTCTTCTT+GGG | - | chr8.3:20119579-20119598 | MS.gene71941:intron | 30.0% |
| AAAAGATATCTCTGCGGATA+TGG | - | chr8.3:20119232-20119251 | MS.gene71941:intron | 35.0% | |
| AAACATACCATATAAGGGTG+TGG | + | chr8.3:20120352-20120371 | None:intergenic | 35.0% | |
| AACATAAGAGTCTGTTTGGT+TGG | + | chr8.3:20120679-20120698 | None:intergenic | 35.0% | |
| AAGAGAATTAAAAGACGACC+GGG | - | chr8.3:20120115-20120134 | MS.gene71941:intron | 35.0% | |
| AAGGAAATGGAAACTTACAG+GGG | + | chr8.3:20118564-20118583 | None:intergenic | 35.0% | |
| AAGGTAGGTTCAACTAAAAC+AGG | + | chr8.3:20119539-20119558 | None:intergenic | 35.0% | |
| ACACCCTTATATGGTATGTT+TGG | - | chr8.3:20120351-20120370 | MS.gene71941:intron | 35.0% | |
| ACATAAGAGTCTGTTTGGTT+GGG | + | chr8.3:20120678-20120697 | None:intergenic | 35.0% | |
| ATATCATGGGTATGTTTGGA+TGG | - | chr8.3:20120192-20120211 | MS.gene71941:intron | 35.0% | |
| ATGCAATTCAACAAACTAGC+AGG | - | chr8.3:20121568-20121587 | MS.gene71941:CDS | 35.0% | |
| ATTGCGAAAAAACTAACAGG+GGG | + | chr8.3:20118857-20118876 | None:intergenic | 35.0% | |
| CAAAGGAAATGGAAACTTAC+AGG | + | chr8.3:20118566-20118585 | None:intergenic | 35.0% | |
| CAGAATTCAATGAGTTCAAC+TGG | + | chr8.3:20119731-20119750 | None:intergenic | 35.0% | |
| CATTGCGAAAAAACTAACAG+GGG | + | chr8.3:20118858-20118877 | None:intergenic | 35.0% | |
| CTCATACAAGTTTACAGTTG+CGG | - | chr8.3:20120934-20120953 | MS.gene71941:intron | 35.0% | |
| CTCCCCTAATAGAAAACAAA+TGG | + | chr8.3:20121820-20121839 | None:intergenic | 35.0% | |
| CTTATCCTTGCATTGCATAT+CGG | + | chr8.3:20119171-20119190 | None:intergenic | 35.0% | |
| GAAGAGAATTAAAAGACGAC+CGG | - | chr8.3:20120114-20120133 | MS.gene71941:intron | 35.0% | |
| GAATTCAATGAGTTCAACTG+GGG | + | chr8.3:20119729-20119748 | None:intergenic | 35.0% | |
| GACTTAACGATCATGGTATT+TGG | - | chr8.3:20121361-20121380 | MS.gene71941:CDS | 35.0% | |
| TAATCAACTGTTAGTTGGCA+TGG | - | chr8.3:20119906-20119925 | MS.gene71941:intron | 35.0% | |
| TCATTGTTGTAGAGTAGTAC+TGG | - | chr8.3:20119978-20119997 | MS.gene71941:intron | 35.0% | |
| TCTTAAGTAACTAAAAGGCC+TGG | + | chr8.3:20119855-20119874 | None:intergenic | 35.0% | |
| TGGAAAGAGATCAAAGGAAA+TGG | + | chr8.3:20118577-20118596 | None:intergenic | 35.0% | |
| TGTAGCAGAAATTAGAGTAC+AGG | + | chr8.3:20121844-20121863 | None:intergenic | 35.0% | |
| ! | AAAAGCATAACGGCAGAAAA+GGG | - | chr8.3:20121384-20121403 | MS.gene71941:CDS | 35.0% |
| ! | ATATCCGCAGAGATATCTTT+TGG | + | chr8.3:20119233-20119252 | None:intergenic | 35.0% |
| ! | ATGAAATGAGGTATCCTGTT+TGG | - | chr8.3:20120399-20120418 | MS.gene71941:intron | 35.0% |
| ! | CATGGATTTTCAGTCTGAAT+AGG | - | chr8.3:20121671-20121690 | MS.gene71941:intron | 35.0% |
| ! | CGTTTGAAACCCTAGAAAAA+TGG | + | chr8.3:20118597-20118616 | None:intergenic | 35.0% |
| ! | GACTATAGTTGCTTTGTTAC+AGG | - | chr8.3:20121506-20121525 | MS.gene71941:intron | 35.0% |
| ! | GCAAAAATATCAAGGCATCT+AGG | + | chr8.3:20121074-20121093 | None:intergenic | 35.0% |
| ! | GGTATGTTTGGTTCAAACAA+GGG | - | chr8.3:20120363-20120382 | MS.gene71941:intron | 35.0% |
| ! | GTAGGGCTAAGTCTATATTT+TGG | - | chr8.3:20120223-20120242 | MS.gene71941:intron | 35.0% |
| ! | GTATGTTTGGTTCAAACAAG+GGG | - | chr8.3:20120364-20120383 | MS.gene71941:intron | 35.0% |
| ! | GTCATATTAATCGGCTTACT+TGG | - | chr8.3:20121992-20122011 | MS.gene71941:intron | 35.0% |
| ! | GTTACAAGATTTGTGCCATT+CGG | - | chr8.3:20119321-20119340 | MS.gene71941:intron | 35.0% |
| ! | TGGTATGTTTGGTTCAAACA+AGG | - | chr8.3:20120362-20120381 | MS.gene71941:intron | 35.0% |
| ! | TGTTCAATTTCTAGGAATGG+AGG | + | chr8.3:20120610-20120629 | None:intergenic | 35.0% |
| ! | TTACAAGATTTGTGCCATTC+GGG | - | chr8.3:20119322-20119341 | MS.gene71941:intron | 35.0% |
| ! | TTCTGAAAAAGAACCTCTAG+GGG | + | chr8.3:20119466-20119485 | None:intergenic | 35.0% |
| !! | ATATTTTAGGCAATGCCTCT+AGG | - | chr8.3:20120503-20120522 | MS.gene71941:intron | 35.0% |
| !! | TTATTTCTGTTCCCTACGAA+CGG | + | chr8.3:20120027-20120046 | None:intergenic | 35.0% |
| !! | TTTGGATGGAGAGTTTTGTA+GGG | - | chr8.3:20120206-20120225 | MS.gene71941:intron | 35.0% |
| !!! | ATGGAGGATTTTTTAGAGGA+GGG | + | chr8.3:20120325-20120344 | None:intergenic | 35.0% |
| !!! | TAGGATGGAGGATTTTTTAG+AGG | + | chr8.3:20120329-20120348 | None:intergenic | 35.0% |
| !!! | TTCTAGTGCTGTCGTTTTTA+TGG | - | chr8.3:20121440-20121459 | MS.gene71941:intron | 35.0% |
| AAGATCTACCTGCGATGTTA+TGG | - | chr8.3:20119022-20119041 | MS.gene71941:intron | 40.0% | |
| ACCCATGATATATGAGAGAG+CGG | + | chr8.3:20120183-20120202 | None:intergenic | 40.0% | |
| ACCGCTCTCTCATATATCAT+GGG | - | chr8.3:20120179-20120198 | MS.gene71941:intron | 40.0% | |
| AGAGAATTAAAAGACGACCG+GGG | - | chr8.3:20120116-20120135 | MS.gene71941:intron | 40.0% | |
| AGATCTACCTGCGATGTTAT+GGG | - | chr8.3:20119023-20119042 | MS.gene71941:intron | 40.0% | |
| AGTCGGGAGCAAAAATATCA+AGG | + | chr8.3:20121082-20121101 | None:intergenic | 40.0% | |
| ATAACATCGCAGGTAGATCT+TGG | + | chr8.3:20119023-20119042 | None:intergenic | 40.0% | |
| ATAAGAGTCTGTTTGGTTGG+GGG | + | chr8.3:20120676-20120695 | None:intergenic | 40.0% | |
| ATGATCCCATAATAGCGATG+GGG | - | chr8.3:20120729-20120748 | MS.gene71941:intron | 40.0% | |
| ATTATGGGATCATGGATCGA+AGG | + | chr8.3:20120722-20120741 | None:intergenic | 40.0% | |
| CAGTCCAAAAGATATCTCTG+CGG | - | chr8.3:20119226-20119245 | MS.gene71941:intron | 40.0% | |
| CATAAGAGTCTGTTTGGTTG+GGG | + | chr8.3:20120677-20120696 | None:intergenic | 40.0% | |
| CATGATCCCATAATAGCGAT+GGG | - | chr8.3:20120728-20120747 | MS.gene71941:intron | 40.0% | |
| CGCAACTGTAAACTTGTATG+AGG | + | chr8.3:20120936-20120955 | None:intergenic | 40.0% | |
| CGTGAAGGCAACAAAAATCA+CGG | - | chr8.3:20121950-20121969 | MS.gene71941:intron | 40.0% | |
| CTCTTCAAATCCCCCAATAT+TGG | - | chr8.3:20120548-20120567 | MS.gene71941:intron | 40.0% | |
| GAACATTGGGGAGAGATATA+AGG | - | chr8.3:20119818-20119837 | MS.gene71941:intron | 40.0% | |
| GATTGCTTAGTTCAACAAGG+AGG | - | chr8.3:20119344-20119363 | MS.gene71941:intron | 40.0% | |
| GGCTAACATAAGAGTCTGTT+TGG | + | chr8.3:20120683-20120702 | None:intergenic | 40.0% | |
| GGTATGATTATCACGCTAGT+TGG | - | chr8.3:20119253-20119272 | MS.gene71941:intron | 40.0% | |
| TACCGCTCTCTCATATATCA+TGG | - | chr8.3:20120178-20120197 | MS.gene71941:intron | 40.0% | |
| TCAGAAAATGGAAATGCCAG+TGG | - | chr8.3:20119480-20119499 | MS.gene71941:intron | 40.0% | |
| TCATCACTTCATTGAGTCTG+CGG | - | chr8.3:20121644-20121663 | MS.gene71941:intron | 40.0% | |
| TCTTGTGTTGCAAAACTGTG+AGG | - | chr8.3:20120900-20120919 | MS.gene71941:CDS | 40.0% | |
| TGATAGCTATGTTGCCTTCA+AGG | - | chr8.3:20118699-20118718 | MS.gene71941:intron | 40.0% | |
| TTGAACTAAGCAATCCCGAA+TGG | + | chr8.3:20119339-20119358 | None:intergenic | 40.0% | |
| ! | AAATGAGGTATCCTGTTTGG+TGG | - | chr8.3:20120402-20120421 | MS.gene71941:intron | 40.0% |
| ! | ATACCATATAAGGGTGTGGT+AGG | + | chr8.3:20120348-20120367 | None:intergenic | 40.0% |
| ! | GAAAAGCATAACGGCAGAAA+AGG | - | chr8.3:20121383-20121402 | MS.gene71941:CDS | 40.0% |
| ! | GGGATATTTCAGGTAACAAG+AGG | - | chr8.3:20119599-20119618 | MS.gene71941:intron | 40.0% |
| ! | TCTTTTGCGATCAAAGCTGA+TGG | - | chr8.3:20121291-20121310 | MS.gene71941:intron | 40.0% |
| ! | TTTTTGCTCCCGACTCTAAA+AGG | - | chr8.3:20121087-20121106 | MS.gene71941:CDS | 40.0% |
| !! | CTAAAAGGTGCTTTCTGAGT+TGG | - | chr8.3:20121102-20121121 | MS.gene71941:CDS | 40.0% |
| !! | GTTTGGATGGAGAGTTTTGT+AGG | - | chr8.3:20120205-20120224 | MS.gene71941:intron | 40.0% |
| !!! | AGAAAGCACCTTTTAGAGTC+GGG | + | chr8.3:20121098-20121117 | None:intergenic | 40.0% |
| !!! | CAGAAAGCACCTTTTAGAGT+CGG | + | chr8.3:20121099-20121118 | None:intergenic | 40.0% |
| !!! | GATGGAGGATTTTTTAGAGG+AGG | + | chr8.3:20120326-20120345 | None:intergenic | 40.0% |
| AATTGCCCCCATCGCTATTA+TGG | + | chr8.3:20120738-20120757 | None:intergenic | 45.0% | |
| AGGCAAGAGCTCTTATCTCA+AGG | - | chr8.3:20121526-20121545 | MS.gene71941:CDS | 45.0% | |
| AGGGGAGGAAAGATGAAATG+AGG | - | chr8.3:20120387-20120406 | MS.gene71941:intron | 45.0% | |
| AGGTGAAAACAACGAATCCC+AGG | - | chr8.3:20118961-20118980 | MS.gene71941:CDS | 45.0% | |
| ATTGCCCCCATCGCTATTAT+GGG | + | chr8.3:20120737-20120756 | None:intergenic | 45.0% | |
| CAGAGCGTAAAAACCAACGA+TGG | - | chr8.3:20119200-20119219 | MS.gene71941:intron | 45.0% | |
| CATCCTACCACACCCTTATA+TGG | - | chr8.3:20120342-20120361 | MS.gene71941:intron | 45.0% | |
| CCATCGCTATTATGGGATCA+TGG | + | chr8.3:20120730-20120749 | None:intergenic | 45.0% | |
| CCATGATCCCATAATAGCGA+TGG | - | chr8.3:20120727-20120746 | MS.gene71941:intron | 45.0% | |
| CGGGATTGCTTAGTTCAACA+AGG | - | chr8.3:20119341-20119360 | MS.gene71941:intron | 45.0% | |
| GAAGGCAACAAAAATCACGG+TGG | - | chr8.3:20121953-20121972 | MS.gene71941:intron | 45.0% | |
| GCTTACTTGGCGTAATCATG+GGG | - | chr8.3:20122005-20122024 | MS.gene71941:CDS | 45.0% | |
| GGACGAACACAATACTTCCT+GGG | + | chr8.3:20118981-20119000 | None:intergenic | 45.0% | |
| GGCAAGACAATTCCAGTGTT+GGG | + | chr8.3:20119002-20119021 | None:intergenic | 45.0% | |
| GGCTTACTTGGCGTAATCAT+GGG | - | chr8.3:20122004-20122023 | MS.gene71941:CDS | 45.0% | |
| TAAGAGTCTGTTTGGTTGGG+GGG | + | chr8.3:20120675-20120694 | None:intergenic | 45.0% | |
| TACAAGCTGTACCGTTCGTA+GGG | - | chr8.3:20120013-20120032 | MS.gene71941:intron | 45.0% | |
| TACCTGCGATGTTATGGGTA+CGG | - | chr8.3:20119028-20119047 | MS.gene71941:intron | 45.0% | |
| TATAAGGAGAGCAGAGATCC+AGG | - | chr8.3:20119834-20119853 | MS.gene71941:intron | 45.0% | |
| TATTGTGTTCGTCCCAACAC+TGG | - | chr8.3:20118987-20119006 | MS.gene71941:CDS | 45.0% | |
| TGATCCCATAATAGCGATGG+GGG | - | chr8.3:20120730-20120749 | MS.gene71941:intron | 45.0% | |
| TGGCAAGACAATTCCAGTGT+TGG | + | chr8.3:20119003-20119022 | None:intergenic | 45.0% | |
| ! | AGCTTCTTTTTGCGCTTGCA+TGG | + | chr8.3:20119144-20119163 | None:intergenic | 45.0% |
| ! | CATATAAGGGTGTGGTAGGA+TGG | + | chr8.3:20120344-20120363 | None:intergenic | 45.0% |
| ! | GTTTGGTTCAAACAAGGGGA+GGG | - | chr8.3:20120368-20120387 | MS.gene71941:intron | 45.0% |
| ! | TGTTTGGTTCAAACAAGGGG+AGG | - | chr8.3:20120367-20120386 | MS.gene71941:intron | 45.0% |
| ! | TTTGGTTCAAACAAGGGGAG+GGG | - | chr8.3:20120369-20120388 | MS.gene71941:intron | 45.0% |
| ! | TTTTGGACTGACACCATCGT+TGG | + | chr8.3:20119216-20119235 | None:intergenic | 45.0% |
| !! | AAAATTATAAAATTCATATT+TGG | + | chr8.3:20121018-20121037 | None:intergenic | 5.0% |
| ACCCTTCCTCAGAACCTTCT+GGG | + | chr8.3:20119440-20119459 | None:intergenic | 50.0% | |
| AGTGAATCCTCACCAGTTCC+TGG | + | chr8.3:20121599-20121618 | None:intergenic | 50.0% | |
| ATCCGTACCCATAACATCGC+AGG | + | chr8.3:20119033-20119052 | None:intergenic | 50.0% | |
| ATGCTGAGGAGATCACCATC+GGG | + | chr8.3:20118520-20118539 | None:intergenic | 50.0% | |
| CATTGAGTCTGCGGTCTTCA+TGG | - | chr8.3:20121653-20121672 | MS.gene71941:intron | 50.0% | |
| CGGCTTACTTGGCGTAATCA+TGG | - | chr8.3:20122003-20122022 | MS.gene71941:CDS | 50.0% | |
| CTACAAGCTGTACCGTTCGT+AGG | - | chr8.3:20120012-20120031 | MS.gene71941:intron | 50.0% | |
| GATGCTGAGGAGATCACCAT+CGG | + | chr8.3:20118521-20118540 | None:intergenic | 50.0% | |
| GCAGATTTGTCTTGAGCCAC+AGG | + | chr8.3:20119638-20119657 | None:intergenic | 50.0% | |
| GCTTAGTTCAACAAGGAGGC+AGG | - | chr8.3:20119348-20119367 | MS.gene71941:intron | 50.0% | |
| GGCTCAAGACAAATCTGCAG+AGG | - | chr8.3:20119640-20119659 | MS.gene71941:intron | 50.0% | |
| GGGACGAACACAATACTTCC+TGG | + | chr8.3:20118982-20119001 | None:intergenic | 50.0% | |
| GGTCCTGAATTCGCACAAGT+GGG | - | chr8.3:20119501-20119520 | MS.gene71941:intron | 50.0% | |
| TCCAGCCGATATGCAATGCA+AGG | - | chr8.3:20119163-20119182 | MS.gene71941:intron | 50.0% | |
| TCCTTGCATTGCATATCGGC+TGG | + | chr8.3:20119167-20119186 | None:intergenic | 50.0% | |
| TCTGTTTGGTTGGGGGGAAA+TGG | + | chr8.3:20120669-20120688 | None:intergenic | 50.0% | |
| TGGTCCTGAATTCGCACAAG+TGG | - | chr8.3:20119500-20119519 | MS.gene71941:intron | 50.0% | |
| TTGTGCGAATTCAGGACCAC+TGG | + | chr8.3:20119499-20119518 | None:intergenic | 50.0% | |
| TTTGGTTGGGGGGAAATGGA+GGG | + | chr8.3:20120665-20120684 | None:intergenic | 50.0% | |
| ! | AGGTATCCTGTTTGGTGGAG+GGG | - | chr8.3:20120407-20120426 | MS.gene71941:intron | 50.0% |
| ! | ATAAGGGTGTGGTAGGATGG+AGG | + | chr8.3:20120341-20120360 | None:intergenic | 50.0% |
| ! | CGAGGAGTGCAAATTGAGAG+TGG | - | chr8.3:20119380-20119399 | MS.gene71941:intron | 50.0% |
| ! | GAGGTATCCTGTTTGGTGGA+GGG | - | chr8.3:20120406-20120425 | MS.gene71941:intron | 50.0% |
| ! | GATCGAAGGTACGACTTGAG+GGG | + | chr8.3:20120708-20120727 | None:intergenic | 50.0% |
| ! | GGATCGAAGGTACGACTTGA+GGG | + | chr8.3:20120709-20120728 | None:intergenic | 50.0% |
| ! | GTCGATGTCTTTTCTTGCCC+CGG | + | chr8.3:20120136-20120155 | None:intergenic | 50.0% |
| ! | TGAGGTATCCTGTTTGGTGG+AGG | - | chr8.3:20120405-20120424 | MS.gene71941:intron | 50.0% |
| ! | TGGATCGAAGGTACGACTTG+AGG | + | chr8.3:20120710-20120729 | None:intergenic | 50.0% |
| !! | TCCCAGAAGGTTCTGAGGAA+GGG | - | chr8.3:20119436-20119455 | MS.gene71941:intron | 50.0% |
| AATGCTCCCCTCCACCAAAC+AGG | + | chr8.3:20120416-20120435 | None:intergenic | 55.0% | |
| AGGATCTGCTGAACGACCTG+TGG | - | chr8.3:20119619-20119638 | MS.gene71941:intron | 55.0% | |
| CAACAAGGAGGCAGGACATG+TGG | - | chr8.3:20119356-20119375 | MS.gene71941:intron | 55.0% | |
| CAGGGGAACTTGAGTTCGAG+AGG | + | chr8.3:20118547-20118566 | None:intergenic | 55.0% | |
| GAATCCTCACCAGTTCCTGG+CGG | + | chr8.3:20121596-20121615 | None:intergenic | 55.0% | |
| GACCCTTCCTCAGAACCTTC+TGG | + | chr8.3:20119441-20119460 | None:intergenic | 55.0% | |
| GAGATGAGAGTGGGGAGAGA+AGG | - | chr8.3:20119943-20119962 | MS.gene71941:intron | 55.0% | |
| GGACCCACTTGTGCGAATTC+AGG | + | chr8.3:20119507-20119526 | None:intergenic | 55.0% | |
| GTTCGAGAGGTTCGATGCTG+AGG | + | chr8.3:20118534-20118553 | None:intergenic | 55.0% | |
| GTTTGGTTGGGGGGAAATGG+AGG | + | chr8.3:20120666-20120685 | None:intergenic | 55.0% | |
| TAGGAGCTGCTGAAGCGTGA+AGG | - | chr8.3:20121935-20121954 | MS.gene71941:intron | 55.0% | |
| TCCAGTCCCAGAAGGTTCTG+AGG | - | chr8.3:20119431-20119450 | MS.gene71941:intron | 55.0% | |
| ! | GAAGGTACGACTTGAGGGGT+TGG | + | chr8.3:20120704-20120723 | None:intergenic | 55.0% |
| !! | GAACCTTCTGGGACTGGAGA+TGG | + | chr8.3:20119429-20119448 | None:intergenic | 55.0% |
| !! | GAGGGGAGCATTTCAAGGGA+GGG | - | chr8.3:20120424-20120443 | MS.gene71941:intron | 55.0% |
| !! | GGTGGAGGGGAGCATTTCAA+GGG | - | chr8.3:20120420-20120439 | MS.gene71941:intron | 55.0% |
| !! | GTCCCAGAAGGTTCTGAGGA+AGG | - | chr8.3:20119435-20119454 | MS.gene71941:intron | 55.0% |
| !! | TCCTCAGAACCTTCTGGGAC+TGG | + | chr8.3:20119435-20119454 | None:intergenic | 55.0% |
| !! | TGGTGGAGGGGAGCATTTCA+AGG | - | chr8.3:20120419-20120438 | MS.gene71941:intron | 55.0% |
| ACAAACTAGCAGGCTCCGCC+AGG | - | chr8.3:20121578-20121597 | MS.gene71941:intron | 60.0% | |
| CCACCATCTCCAGTCCCAGA+AGG | - | chr8.3:20119423-20119442 | MS.gene71941:intron | 60.0% | |
| GAGGAAGGGTCATCCCCTAG+AGG | - | chr8.3:20119450-20119469 | MS.gene71941:intron | 60.0% | |
| GGGGGAAATGGAGGGAAGGA+AGG | + | chr8.3:20120657-20120676 | None:intergenic | 60.0% | |
| GGTTCAAACAAGGGGAGGGG+AGG | - | chr8.3:20120372-20120391 | MS.gene71941:intron | 60.0% | |
| GTTGGGGGGAAATGGAGGGA+AGG | + | chr8.3:20120661-20120680 | None:intergenic | 60.0% | |
| ! | ACTGGAGATGGTGGTTGCGG+CGG | + | chr8.3:20119417-20119436 | None:intergenic | 60.0% |
| ! | GGGACTGGAGATGGTGGTTG+CGG | + | chr8.3:20119420-20119439 | None:intergenic | 60.0% |
| !! | CCTTCTGGGACTGGAGATGG+TGG | + | chr8.3:20119426-20119445 | None:intergenic | 60.0% |
| !! | GGAGGGGAGCATTTCAAGGG+AGG | - | chr8.3:20120423-20120442 | MS.gene71941:intron | 60.0% |
| GGAGGCAGGACATGTGGTCG+AGG | - | chr8.3:20119362-20119381 | MS.gene71941:intron | 65.0% | |
| TAGCAGGCTCCGCCAGGAAC+TGG | - | chr8.3:20121584-20121603 | MS.gene71941:intron | 65.0% | |
| GGCTCCGCCAGGAACTGGTG+AGG | - | chr8.3:20121589-20121608 | MS.gene71941:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 20118511 | 20122048 | 20118511 | ID=MS.gene71941 |
| chr8.3 | mRNA | 20118511 | 20122048 | 20118511 | ID=MS.gene71941.t1;Parent=MS.gene71941 |
| chr8.3 | exon | 20121994 | 20122048 | 20121994 | ID=MS.gene71941.t1.exon1;Parent=MS.gene71941.t1 |
| chr8.3 | CDS | 20121994 | 20122048 | 20121994 | ID=cds.MS.gene71941.t1;Parent=MS.gene71941.t1 |
| chr8.3 | exon | 20121839 | 20121909 | 20121839 | ID=MS.gene71941.t1.exon2;Parent=MS.gene71941.t1 |
| chr8.3 | CDS | 20121839 | 20121909 | 20121839 | ID=cds.MS.gene71941.t1;Parent=MS.gene71941.t1 |
| chr8.3 | exon | 20121515 | 20121596 | 20121515 | ID=MS.gene71941.t1.exon3;Parent=MS.gene71941.t1 |
| chr8.3 | CDS | 20121515 | 20121596 | 20121515 | ID=cds.MS.gene71941.t1;Parent=MS.gene71941.t1 |
| chr8.3 | exon | 20121306 | 20121421 | 20121306 | ID=MS.gene71941.t1.exon4;Parent=MS.gene71941.t1 |
| chr8.3 | CDS | 20121306 | 20121421 | 20121306 | ID=cds.MS.gene71941.t1;Parent=MS.gene71941.t1 |
| chr8.3 | exon | 20121041 | 20121205 | 20121041 | ID=MS.gene71941.t1.exon5;Parent=MS.gene71941.t1 |
| chr8.3 | CDS | 20121041 | 20121205 | 20121041 | ID=cds.MS.gene71941.t1;Parent=MS.gene71941.t1 |
| chr8.3 | exon | 20120898 | 20120948 | 20120898 | ID=MS.gene71941.t1.exon6;Parent=MS.gene71941.t1 |
| chr8.3 | CDS | 20120898 | 20120948 | 20120898 | ID=cds.MS.gene71941.t1;Parent=MS.gene71941.t1 |
| chr8.3 | exon | 20118954 | 20119031 | 20118954 | ID=MS.gene71941.t1.exon7;Parent=MS.gene71941.t1 |
| chr8.3 | CDS | 20118954 | 20119031 | 20118954 | ID=cds.MS.gene71941.t1;Parent=MS.gene71941.t1 |
| chr8.3 | exon | 20118511 | 20118621 | 20118511 | ID=MS.gene71941.t1.exon8;Parent=MS.gene71941.t1 |
| chr8.3 | CDS | 20118511 | 20118621 | 20118511 | ID=cds.MS.gene71941.t1;Parent=MS.gene71941.t1 |
| Gene Sequence |
| Protein sequence |
