Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79280.t1 | XP_013468491.1 | 99.4 | 157 | 1 | 0 | 1 | 157 | 1 | 157 | 1.50E-78 | 303.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79280.t1 | O23174 | 56.2 | 144 | 28 | 2 | 220 | 328 | 214 | 357 | 1.3e-33 | 145.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79280.t1 | I3SAI9 | 99.4 | 157 | 1 | 0 | 1 | 157 | 1 | 157 | 1.1e-78 | 303.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene79280 | 0.803609 | 3.21E-49 | -1.69E-46 |
| MS.gene049208 | MS.gene79280 | 0.806246 | 9.03E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene79280 | 0.810312 | 1.23E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene79280 | 0.835141 | 1.99E-56 | -1.69E-46 |
| MS.gene051700 | MS.gene79280 | 0.806858 | 6.71E-50 | -1.69E-46 |
| MS.gene051757 | MS.gene79280 | 0.812444 | 4.23E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene79280 | 0.803123 | 4.05E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene79280 | 0.801426 | 9.05E-49 | -1.69E-46 |
| MS.gene053381 | MS.gene79280 | 0.803842 | 2.87E-49 | -1.69E-46 |
| MS.gene053677 | MS.gene79280 | 0.807892 | 4.05E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene79280 | 0.818458 | 1.94E-52 | -1.69E-46 |
| MS.gene055313 | MS.gene79280 | 0.816528 | 5.28E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene79280 | 0.801728 | 7.85E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene79280 | 0.809364 | 1.96E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene79280 | 0.807205 | 5.66E-50 | -1.69E-46 |
| MS.gene056390 | MS.gene79280 | 0.801359 | 9.35E-49 | -1.69E-46 |
| MS.gene057360 | MS.gene79280 | 0.824093 | 9.73E-54 | -1.69E-46 |
| MS.gene058639 | MS.gene79280 | 0.819836 | 9.42E-53 | -1.69E-46 |
| MS.gene058758 | MS.gene79280 | 0.818733 | 1.68E-52 | -1.69E-46 |
| MS.gene058852 | MS.gene79280 | 0.814444 | 1.54E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene79280 | 0.815287 | 9.99E-52 | -1.69E-46 |
| MS.gene059171 | MS.gene79280 | 0.820409 | 6.96E-53 | -1.69E-46 |
| MS.gene059227 | MS.gene79280 | 0.810982 | 8.79E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene79280 | 0.805443 | 1.33E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene79280 | 0.809516 | 1.82E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene79280 | 0.809147 | 2.18E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79280.t1 | MTR_1g069925 | 100.000 | 157 | 0 | 0 | 1 | 157 | 1 | 157 | 1.37e-112 | 323 |
| MS.gene79280.t1 | MTR_7g096940 | 59.694 | 196 | 30 | 3 | 183 | 329 | 161 | 356 | 3.93e-59 | 198 |
| MS.gene79280.t1 | MTR_1g085510 | 51.256 | 199 | 50 | 3 | 178 | 329 | 153 | 351 | 1.19e-42 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79280.t1 | AT4G14385 | 68.056 | 144 | 40 | 2 | 3 | 143 | 2 | 142 | 2.81e-55 | 177 |
| MS.gene79280.t1 | AT4G37120 | 54.822 | 197 | 38 | 4 | 183 | 328 | 161 | 357 | 3.74e-52 | 180 |
| MS.gene79280.t1 | AT1G65660 | 52.475 | 202 | 45 | 4 | 178 | 328 | 156 | 357 | 2.25e-51 | 178 |
| MS.gene79280.t1 | AT4G14385 | 72.807 | 114 | 31 | 0 | 3 | 116 | 2 | 115 | 6.49e-49 | 161 |
| MS.gene79280.t1 | AT3G45950 | 45.960 | 198 | 54 | 4 | 178 | 328 | 156 | 347 | 8.98e-42 | 149 |
| MS.gene79280.t1 | AT4G14385 | 72.000 | 100 | 28 | 0 | 3 | 102 | 2 | 101 | 2.55e-39 | 135 |
| MS.gene79280.t1 | AT4G14385 | 72.000 | 100 | 28 | 0 | 3 | 102 | 2 | 101 | 2.55e-39 | 135 |
| MS.gene79280.t1 | AT4G14385 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 5.94e-34 | 121 |
| MS.gene79280.t1 | AT4G14385 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 5.94e-34 | 121 |
| MS.gene79280.t1 | AT4G14385 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 5.94e-34 | 121 |
| MS.gene79280.t1 | AT4G14385 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 5.94e-34 | 121 |
| MS.gene79280.t1 | AT4G14385 | 71.739 | 92 | 26 | 0 | 3 | 94 | 2 | 93 | 5.94e-34 | 121 |
Find 71 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATGAAGGAATCTATTT+TGG | 0.164991 | 1.4:-56945052 | MS.gene79280:CDS |
| GGGAAGTCAGCTTAAGAAAT+TGG | 0.250207 | 1.4:-56945716 | MS.gene79280:CDS |
| TATGGAAACAAGTTATTTAC+AGG | 0.281655 | 1.4:-56948814 | MS.gene79280:CDS |
| TCTTCAGGAACCTGCGTATT+CGG | 0.286851 | 1.4:-56945469 | MS.gene79280:intron |
| CTCGACACAGGTTTATGATA+TGG | 0.290750 | 1.4:-56948832 | MS.gene79280:intron |
| ACGAAGCTCTTCATGAAGTT+TGG | 0.303537 | 1.4:+56949271 | None:intergenic |
| AGCTCGAAAGAAATTCTTAA+AGG | 0.318746 | 1.4:-56945737 | MS.gene79280:CDS |
| CTGATGACAAAGATGATCTA+AGG | 0.320659 | 1.4:-56945660 | MS.gene79280:CDS |
| CTTGCTCTCTTCGCATCTCT+TGG | 0.327976 | 1.4:+56946768 | None:intergenic |
| ACAGTGTGGCAATGTATTAA+AGG | 0.345831 | 1.4:-56948784 | MS.gene79280:CDS |
| ACCTCATACAGCTTCTCATT+TGG | 0.350359 | 1.4:+56945347 | None:intergenic |
| GGCGCACCTCTTCCTTTCTT+CGG | 0.350577 | 1.4:+56946789 | None:intergenic |
| CTTCAGGAACCTGCGTATTC+GGG | 0.356203 | 1.4:-56945468 | MS.gene79280:intron |
| TCAGATGGGAGATCAGATTT+TGG | 0.357334 | 1.4:-56947004 | MS.gene79280:intron |
| TGACCTAACAAAAGTTATCT+TGG | 0.364919 | 1.4:+56944994 | None:intergenic |
| TTTCTTTCGAGCTTCATCTA+TGG | 0.369260 | 1.4:+56945747 | None:intergenic |
| GGTGGAACAATTTATGCAAA+TGG | 0.372296 | 1.4:-56946965 | MS.gene79280:CDS |
| AATGTATTAAAGGGATTTGA+AGG | 0.395885 | 1.4:-56948774 | MS.gene79280:CDS |
| TTGCCACATCCTCACCAGTT+TGG | 0.403072 | 1.4:+56945683 | None:intergenic |
| AAGTTGATGTTTACAGTTTG+CGG | 0.409602 | 1.4:-56946422 | MS.gene79280:CDS |
| TAATGAAAAGAGCCTGTCTT+CGG | 0.428840 | 1.4:+56948045 | None:intergenic |
| TTGGAGAAGAACAGCCAAAC+TGG | 0.430169 | 1.4:-56945697 | MS.gene79280:CDS |
| GCTCGAAAGAAATTCTTAAA+GGG | 0.445837 | 1.4:-56945736 | MS.gene79280:CDS |
| TTTGGTCCTGGTCGATCAAA+AGG | 0.448086 | 1.4:-56946986 | MS.gene79280:CDS |
| TTCACGCATTGACCTAGTCT+TGG | 0.450301 | 1.4:+56945391 | None:intergenic |
| AATGAAAAGAGCCTGTCTTC+GGG | 0.452201 | 1.4:+56948046 | None:intergenic |
| TTCAATCACAATGTCATGTC+AGG | 0.452440 | 1.4:+56946708 | None:intergenic |
| CAGTGTGGCAATGTATTAAA+GGG | 0.460090 | 1.4:-56948783 | MS.gene79280:CDS |
| TCACGCATTGACCTAGTCTT+GGG | 0.466349 | 1.4:+56945392 | None:intergenic |
| ACAAAAGTTATCTTGGAAGT+TGG | 0.469215 | 1.4:+56945001 | None:intergenic |
| ACAAGTTATTTACAGGATCC+TGG | 0.477906 | 1.4:-56948807 | MS.gene79280:CDS |
| GTGGAACAATTTATGCAAAT+GGG | 0.480539 | 1.4:-56946964 | MS.gene79280:CDS |
| GCTTCGTAATATTGAAAAGC+AGG | 0.480561 | 1.4:-56949255 | MS.gene79280:intron |
| ATGAGAGTACAGGAACTGTT+AGG | 0.482959 | 1.4:-56945618 | MS.gene79280:intron |
| TTTGGATCTGCAACTGAAAG+AGG | 0.484297 | 1.4:+56945365 | None:intergenic |
| CAGCCAAACTGGTGAGGATG+TGG | 0.487942 | 1.4:-56945686 | MS.gene79280:CDS |
| CATCTCCGTCTCAAGCTGAA+TGG | 0.506420 | 1.4:-56945116 | MS.gene79280:CDS |
| GAAACTGAAGTCTCAAATGA+AGG | 0.508211 | 1.4:-56945064 | MS.gene79280:CDS |
| CAAGAGATGCGAAGAGAGCA+AGG | 0.508415 | 1.4:-56946767 | MS.gene79280:CDS |
| AATACATTGCCACACTGTCC+AGG | 0.510409 | 1.4:+56948789 | None:intergenic |
| TAGGCAGAAGAGCTTGCAGC+TGG | 0.517903 | 1.4:-56947119 | MS.gene79280:CDS |
| GAAAGTTTCAGCCCGAAGAC+AGG | 0.522864 | 1.4:-56948057 | MS.gene79280:CDS |
| TCCAAATGAGAAGCTGTATG+AGG | 0.538837 | 1.4:-56945348 | MS.gene79280:intron |
| GGTGAACCCTTCAGCAATGT+TGG | 0.540152 | 1.4:-56949315 | MS.gene79280:CDS |
| CAGTGTTCTTTGTTGACGAT+AGG | 0.542807 | 1.4:+56948748 | None:intergenic |
| TTTGGCTCTTCTACTAAGCA+AGG | 0.544435 | 1.4:+56949289 | None:intergenic |
| AAGTATGGAAATGCAGCTGA+TGG | 0.546225 | 1.4:-56945027 | MS.gene79280:CDS |
| TATAGGGGTAAACCGAAGAA+AGG | 0.552151 | 1.4:-56946801 | MS.gene79280:intron |
| AAACATCAACTTCTACAAGT+TGG | 0.554678 | 1.4:+56946433 | None:intergenic |
| GAGCTTGCAGCTGGACGAGA+CGG | 0.560192 | 1.4:-56947110 | MS.gene79280:intron |
| AGTATGGAAATGCAGCTGAT+GGG | 0.560945 | 1.4:-56945026 | MS.gene79280:CDS |
| AAGGAAGCCAACATTGCTGA+AGG | 0.567280 | 1.4:+56949308 | None:intergenic |
| AGATGATCTAAGGGTTGATG+AGG | 0.581075 | 1.4:-56945650 | MS.gene79280:CDS |
| GCAAAGGTTGATGAGAGTAC+AGG | 0.581822 | 1.4:-56945628 | MS.gene79280:CDS |
| TCAGAAACACACCGCTGGCG+AGG | 0.588747 | 1.4:+56948012 | None:intergenic |
| TGATGACAAAGATGATCTAA+GGG | 0.593033 | 1.4:-56945659 | MS.gene79280:CDS |
| GTATGGAAATGCAGCTGATG+GGG | 0.599243 | 1.4:-56945025 | MS.gene79280:CDS |
| ATGTATTAAAGGGATTTGAA+GGG | 0.608853 | 1.4:-56948773 | MS.gene79280:CDS |
| TAAAGCCATTCAGCTTGAGA+CGG | 0.611900 | 1.4:+56945111 | None:intergenic |
| TCTAAGGGTTGATGAGGCAA+AGG | 0.615496 | 1.4:-56945644 | MS.gene79280:CDS |
| GGTAAACCGAAGAAAGGAAG+AGG | 0.619973 | 1.4:-56946795 | MS.gene79280:CDS |
| CACACTACGATCCCAAGACT+AGG | 0.621412 | 1.4:-56945403 | MS.gene79280:CDS |
| ATCTTCAGTGACCTCGCCAG+CGG | 0.629189 | 1.4:-56948023 | MS.gene79280:intron |
| GGTCCTGGTCGATCAAAAGG+TGG | 0.634647 | 1.4:-56946983 | MS.gene79280:CDS |
| CAGTGTCCTCCCGAATACGC+AGG | 0.634957 | 1.4:+56945459 | None:intergenic |
| CAGGAACCTGCGTATTCGGG+AGG | 0.635060 | 1.4:-56945465 | MS.gene79280:CDS |
| GAAGAACAGCCAAACTGGTG+AGG | 0.635287 | 1.4:-56945692 | MS.gene79280:CDS |
| AAGAGATGCGAAGAGAGCAA+GGG | 0.657814 | 1.4:-56946766 | MS.gene79280:CDS |
| AGGAAGCCAACATTGCTGAA+GGG | 0.663989 | 1.4:+56949309 | None:intergenic |
| TTACAGGATCCTGGACAGTG+TGG | 0.680227 | 1.4:-56948798 | MS.gene79280:CDS |
| TCCTTGAAAATGGAATCCGA+AGG | 0.698033 | 1.4:-56949446 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTATATTAATTTTT+AGG | - | chr1.4:56945095-56945114 | MS.gene79280:CDS | 0.0% |
| !!! | AATAACTATATATTTTTACA+TGG | + | chr1.4:56946249-56946268 | None:intergenic | 10.0% |
| !!! | AATCTATTTTTTTTTTTTGT+TGG | - | chr1.4:56946348-56946367 | MS.gene79280:intron | 10.0% |
| !!! | AATTATTTTGAATTTTCATT+TGG | - | chr1.4:56945291-56945310 | MS.gene79280:intron | 10.0% |
| !!! | ATCATTTTTAATTAAAAATG+TGG | - | chr1.4:56948486-56948505 | MS.gene79280:intron | 10.0% |
| !!! | ATTATTTTGAATTTTCATTT+GGG | - | chr1.4:56945292-56945311 | MS.gene79280:intron | 10.0% |
| !! | AAAAAAAAAATGATTGTTTG+TGG | - | chr1.4:56948582-56948601 | MS.gene79280:intron | 15.0% |
| !! | AATACAATTTAACCTTAAAT+TGG | - | chr1.4:56945541-56945560 | MS.gene79280:intron | 15.0% |
| !! | AATCACAAATCATATTTATT+AGG | - | chr1.4:56945959-56945978 | MS.gene79280:intron | 15.0% |
| !! | AGTTGTATATTATTGTATTT+CGG | - | chr1.4:56948281-56948300 | MS.gene79280:intron | 15.0% |
| !! | ATACAATTTAACCTTAAATT+GGG | - | chr1.4:56945542-56945561 | MS.gene79280:intron | 15.0% |
| !! | GTCATTATTAGAAATAATTA+TGG | - | chr1.4:56947119-56947138 | MS.gene79280:CDS | 15.0% |
| !! | TATATAATTATCCAACTTAA+AGG | + | chr1.4:56948903-56948922 | None:intergenic | 15.0% |
| !!! | ATATCTTTTTATCTAATTCT+GGG | + | chr1.4:56946479-56946498 | None:intergenic | 15.0% |
| !!! | ATTCTTTTGTAATTTCAATT+TGG | - | chr1.4:56945056-56945075 | MS.gene79280:CDS | 15.0% |
| !!! | TAACTTTATTGTTTTTGAAT+TGG | - | chr1.4:56947529-56947548 | MS.gene79280:intron | 15.0% |
| !!! | TATATCTTTTTATCTAATTC+TGG | + | chr1.4:56946480-56946499 | None:intergenic | 15.0% |
| !!! | TCTTTTATTTCTAAAAATTG+TGG | - | chr1.4:56948619-56948638 | MS.gene79280:intron | 15.0% |
| !!! | TTATAAGAATTTTAAGATCA+TGG | - | chr1.4:56949354-56949373 | MS.gene79280:intron | 15.0% |
| !! | AAAAATCATCATGTTACTAT+AGG | - | chr1.4:56947627-56947646 | MS.gene79280:intron | 20.0% |
| !! | AAAATCATCATGTTACTATA+GGG | - | chr1.4:56947628-56947647 | MS.gene79280:intron | 20.0% |
| !! | AGCATTATTTAAATAATGCA+GGG | - | chr1.4:56948863-56948882 | MS.gene79280:intron | 20.0% |
| !! | CCATAAATGAATAAAAATCA+TGG | + | chr1.4:56946001-56946020 | None:intergenic | 20.0% |
| !! | CTCAATATTACTTATTAAGT+TGG | - | chr1.4:56948316-56948335 | MS.gene79280:intron | 20.0% |
| !! | GTGTTTGAATTAATAAGAAA+AGG | - | chr1.4:56946154-56946173 | MS.gene79280:intron | 20.0% |
| !! | GTTGTATATTATTGTATTTC+GGG | - | chr1.4:56948282-56948301 | MS.gene79280:intron | 20.0% |
| !! | TAAACAGAATTGACAATAAA+AGG | + | chr1.4:56947223-56947242 | None:intergenic | 20.0% |
| !! | TAGCATTATTTAAATAATGC+AGG | - | chr1.4:56948862-56948881 | MS.gene79280:intron | 20.0% |
| !! | TGCGGTTATTAATTTATATT+TGG | + | chr1.4:56946849-56946868 | None:intergenic | 20.0% |
| !!! | AAATGTTTTTTTTCTTTCCA+AGG | + | chr1.4:56948077-56948096 | None:intergenic | 20.0% |
| !!! | AATCTTACTAAGATTTTAGA+TGG | - | chr1.4:56946122-56946141 | MS.gene79280:intron | 20.0% |
| !!! | AATTTTAATCCATTTGAAAC+AGG | - | chr1.4:56946802-56946821 | MS.gene79280:intron | 20.0% |
| !!! | AGTTTTAGCAAATATAAATC+TGG | + | chr1.4:56947050-56947069 | None:intergenic | 20.0% |
| !!! | ATAGAACATTTTCACTTTAT+TGG | + | chr1.4:56948102-56948121 | None:intergenic | 20.0% |
| !!! | ATTTTTATTCATTTATGGTC+AGG | - | chr1.4:56946003-56946022 | MS.gene79280:intron | 20.0% |
| !!! | CCATGATTTTTATTCATTTA+TGG | - | chr1.4:56945998-56946017 | MS.gene79280:intron | 20.0% |
| !!! | GATTAAATTTTCAATGCAAT+AGG | - | chr1.4:56945506-56945525 | MS.gene79280:intron | 20.0% |
| !!! | TAGAACATTTTCACTTTATT+GGG | + | chr1.4:56948101-56948120 | None:intergenic | 20.0% |
| !!! | TCTTTTATTTTAAACAACTG+TGG | + | chr1.4:56948667-56948686 | None:intergenic | 20.0% |
| !!! | TGTTTCAAATGGATTAAAAT+TGG | + | chr1.4:56946803-56946822 | None:intergenic | 20.0% |
| !!! | TTATATTTGCTAAAACTTAG+AGG | - | chr1.4:56947053-56947072 | MS.gene79280:intron | 20.0% |
| !!! | TTGATTTAATTTTTGTGATC+CGG | - | chr1.4:56948168-56948187 | MS.gene79280:intron | 20.0% |
| !!! | TTTTACTTGATTCGATATTT+GGG | - | chr1.4:56948213-56948232 | MS.gene79280:intron | 20.0% |
| !!! | TTTTTACTTGATTCGATATT+TGG | - | chr1.4:56948212-56948231 | MS.gene79280:intron | 20.0% |
| ! | AAATCATCATGTTACTATAG+GGG | - | chr1.4:56947629-56947648 | MS.gene79280:intron | 25.0% |
| ! | AATATATGTTTCAGCGTAAT+AGG | - | chr1.4:56949208-56949227 | MS.gene79280:intron | 25.0% |
| ! | AATCATATTTATTAGGCATC+TGG | - | chr1.4:56945966-56945985 | MS.gene79280:intron | 25.0% |
| ! | AATGTATTAAAGGGATTTGA+AGG | - | chr1.4:56945671-56945690 | MS.gene79280:CDS | 25.0% |
| ! | AATTAAATGCTTTACATGAG+TGG | - | chr1.4:56946997-56947016 | MS.gene79280:CDS | 25.0% |
| ! | ATATATGTTTCAGCGTAATA+GGG | - | chr1.4:56949209-56949228 | MS.gene79280:intron | 25.0% |
| ! | ATATTTCCATTTATCTCAGA+TGG | - | chr1.4:56947426-56947445 | MS.gene79280:intron | 25.0% |
| ! | ATGCTTATTGTACTTGTATT+TGG | - | chr1.4:56949181-56949200 | MS.gene79280:intron | 25.0% |
| ! | ATGTATTAAAGGGATTTGAA+GGG | - | chr1.4:56945672-56945691 | MS.gene79280:CDS | 25.0% |
| ! | CATATGATATAATTGAGTCT+AGG | + | chr1.4:56946886-56946905 | None:intergenic | 25.0% |
| ! | CGAAAAGTAACATGAATTAA+GGG | + | chr1.4:56945031-56945050 | None:intergenic | 25.0% |
| ! | CTTTGTGCAACATAAAAAAT+TGG | - | chr1.4:56947916-56947935 | MS.gene79280:intron | 25.0% |
| ! | GCATTATTTAAATAATGCAG+GGG | - | chr1.4:56948864-56948883 | MS.gene79280:intron | 25.0% |
| ! | TACATATTTGACATGATTTG+CGG | + | chr1.4:56947584-56947603 | None:intergenic | 25.0% |
| ! | TATGGAAACAAGTTATTTAC+AGG | - | chr1.4:56945631-56945650 | MS.gene79280:CDS | 25.0% |
| ! | TATTTCCATTTATCTCAGAT+GGG | - | chr1.4:56947427-56947446 | MS.gene79280:intron | 25.0% |
| ! | TCCTCATTCTATGTATATAT+TGG | - | chr1.4:56947852-56947871 | MS.gene79280:intron | 25.0% |
| ! | TCGAAAAGTAACATGAATTA+AGG | + | chr1.4:56945032-56945051 | None:intergenic | 25.0% |
| ! | TTCAATGCAATAGGATAATT+GGG | - | chr1.4:56945515-56945534 | MS.gene79280:intron | 25.0% |
| ! | TTGACAATAAAAGGCTTAAA+AGG | + | chr1.4:56947214-56947233 | None:intergenic | 25.0% |
| ! | TTGTCAATTCTGTTTAATCA+TGG | - | chr1.4:56947227-56947246 | MS.gene79280:intron | 25.0% |
| ! | TTTCAATGCAATAGGATAAT+TGG | - | chr1.4:56945514-56945533 | MS.gene79280:intron | 25.0% |
| !! | AAAGCATTTAATTTCTCAAC+CGG | + | chr1.4:56946990-56947009 | None:intergenic | 25.0% |
| !! | GATCTTCATCTTTTTATTGT+AGG | - | chr1.4:56947307-56947326 | MS.gene79280:intron | 25.0% |
| !! | TATCTAATCATTTTCACAAG+TGG | + | chr1.4:56948137-56948156 | None:intergenic | 25.0% |
| !! | TCAAATGAAGGAATCTATTT+TGG | - | chr1.4:56949393-56949412 | MS.gene79280:intron | 25.0% |
| !! | TCATTTTATCATTGATGAAC+TGG | - | chr1.4:56948937-56948956 | MS.gene79280:intron | 25.0% |
| !! | TGTTTTATCAACATGAAACT+TGG | + | chr1.4:56947159-56947178 | None:intergenic | 25.0% |
| !!! | ACATTGAAAGCATTTGATAA+GGG | - | chr1.4:56949286-56949305 | MS.gene79280:CDS | 25.0% |
| !!! | ACTTTTTCAATTTTAGCTTC+TGG | - | chr1.4:56945215-56945234 | MS.gene79280:intron | 25.0% |
| !!! | ATTTTTAGGTCAAAAAAGTG+CGG | - | chr1.4:56945109-56945128 | MS.gene79280:CDS | 25.0% |
| !!! | CTTTTTCAATTTTAGCTTCT+GGG | - | chr1.4:56945216-56945235 | MS.gene79280:intron | 25.0% |
| !!! | TACATTGAAAGCATTTGATA+AGG | - | chr1.4:56949285-56949304 | MS.gene79280:CDS | 25.0% |
| !!! | TAGCACGTTAATTTTTTACT+AGG | - | chr1.4:56946713-56946732 | MS.gene79280:intron | 25.0% |
| !!! | TGAATTTTGATTAGTGAGAT+AGG | + | chr1.4:56949126-56949145 | None:intergenic | 25.0% |
| !!! | TTACAACTATTTCTGCAAAA+AGG | - | chr1.4:56948394-56948413 | MS.gene79280:intron | 25.0% |
| !!! | TTTGTTATCGATTTTAATCG+AGG | - | chr1.4:56948457-56948476 | MS.gene79280:intron | 25.0% |
| AAACATCAACTTCTACAAGT+TGG | + | chr1.4:56948015-56948034 | None:intergenic | 30.0% | |
| AATCCAGTATAGTCAAAGAA+TGG | + | chr1.4:56945244-56945263 | None:intergenic | 30.0% | |
| ACAATAAAAGGCTTAAAAGG+AGG | + | chr1.4:56947211-56947230 | None:intergenic | 30.0% | |
| AGCTCGAAAGAAATTCTTAA+AGG | - | chr1.4:56948708-56948727 | MS.gene79280:intron | 30.0% | |
| ATATTTATTAGGCATCTGGT+CGG | - | chr1.4:56945970-56945989 | MS.gene79280:intron | 30.0% | |
| ATGATAGAAGTGATTACAAC+AGG | - | chr1.4:56946736-56946755 | MS.gene79280:CDS | 30.0% | |
| ATGATATAATTGAGTCTAGG+AGG | + | chr1.4:56946883-56946902 | None:intergenic | 30.0% | |
| ATGTACATTTCTATGAAGCA+CGG | - | chr1.4:56945366-56945385 | MS.gene79280:CDS | 30.0% | |
| CAATAAAAGGCTTAAAAGGA+GGG | + | chr1.4:56947210-56947229 | None:intergenic | 30.0% | |
| GAAATGTGAATGTAAACTTC+TGG | + | chr1.4:56946968-56946987 | None:intergenic | 30.0% | |
| GAAGTCATTGAAATGTTCAT+AGG | + | chr1.4:56947367-56947386 | None:intergenic | 30.0% | |
| GAAGTTTACATTCACATTTC+CGG | - | chr1.4:56946968-56946987 | MS.gene79280:CDS | 30.0% | |
| GAATTAAGGGTTATTACCTT+CGG | + | chr1.4:56945018-56945037 | None:intergenic | 30.0% | |
| GATACTCAAAACTACAGATT+CGG | + | chr1.4:56945886-56945905 | None:intergenic | 30.0% | |
| GCAAAGTTGAAATAAATGAC+AGG | + | chr1.4:56947028-56947047 | None:intergenic | 30.0% | |
| GCCAATATATACATAGAATG+AGG | + | chr1.4:56947856-56947875 | None:intergenic | 30.0% | |
| GCTCGAAAGAAATTCTTAAA+GGG | - | chr1.4:56948709-56948728 | MS.gene79280:intron | 30.0% | |
| GTGGAACAATTTATGCAAAT+GGG | - | chr1.4:56947481-56947500 | MS.gene79280:intron | 30.0% | |
| TAACAAAACAGAATGCATGA+AGG | + | chr1.4:56946304-56946323 | None:intergenic | 30.0% | |
| TAGAAATAATTATGGCTGAC+AGG | - | chr1.4:56947127-56947146 | MS.gene79280:intron | 30.0% | |
| TAGGAGGAAATTATTAACTG+CGG | + | chr1.4:56946867-56946886 | None:intergenic | 30.0% | |
| TGATGACAAAGATGATCTAA+GGG | - | chr1.4:56948786-56948805 | MS.gene79280:CDS | 30.0% | |
| TGTGTTTGATCTTTGATACA+CGG | - | chr1.4:56946913-56946932 | MS.gene79280:intron | 30.0% | |
| TTACATCCTTATCATGAAAG+TGG | - | chr1.4:56946651-56946670 | MS.gene79280:intron | 30.0% | |
| ! | AAAAGGAGGGATCATTTTAT+GGG | + | chr1.4:56947197-56947216 | None:intergenic | 30.0% |
| ! | ATAGTACTTTTCAGTGACTT+TGG | - | chr1.4:56946676-56946695 | MS.gene79280:intron | 30.0% |
| ! | ATCATTTTATGGGATAGGAA+AGG | + | chr1.4:56947187-56947206 | None:intergenic | 30.0% |
| ! | ATTCGGACAGAAAATTTTGA+TGG | + | chr1.4:56945869-56945888 | None:intergenic | 30.0% |
| ! | CAACTTTCTGCTAAACTTTT+TGG | - | chr1.4:56947776-56947795 | MS.gene79280:intron | 30.0% |
| ! | TAAAAGGAGGGATCATTTTA+TGG | + | chr1.4:56947198-56947217 | None:intergenic | 30.0% |
| ! | TCTGGAACAATAAATTACCA+GGG | + | chr1.4:56946950-56946969 | None:intergenic | 30.0% |
| ! | TCTTTTTATCTAATTCTGGG+TGG | + | chr1.4:56946476-56946495 | None:intergenic | 30.0% |
| !! | AAGTTGATGTTTACAGTTTG+CGG | - | chr1.4:56948023-56948042 | MS.gene79280:intron | 30.0% |
| !! | CATTGAAAGCATTTGATAAG+GGG | - | chr1.4:56949287-56949306 | MS.gene79280:CDS | 30.0% |
| !! | GAATCTATTTTGGAGAAGTA+TGG | - | chr1.4:56949403-56949422 | MS.gene79280:intron | 30.0% |
| !! | TGTTTCTGATTTTCAGTGAT+AGG | - | chr1.4:56946447-56946466 | MS.gene79280:CDS | 30.0% |
| !! | TTCTGGAACAATAAATTACC+AGG | + | chr1.4:56946951-56946970 | None:intergenic | 30.0% |
| !! | TTTTGATGGTACTTCTTCTA+CGG | + | chr1.4:56945855-56945874 | None:intergenic | 30.0% |
| !!! | TTTTCAGTGACTTTGGTTTT+TGG | - | chr1.4:56946683-56946702 | MS.gene79280:intron | 30.0% |
| !!! | TTTTTTTCTTTCCAAGGTAG+TGG | + | chr1.4:56948071-56948090 | None:intergenic | 30.0% |
| AAATGCTTTACATGAGTGGA+AGG | - | chr1.4:56947001-56947020 | MS.gene79280:CDS | 35.0% | |
| ACAAGTTATTTACAGGATCC+TGG | - | chr1.4:56945638-56945657 | MS.gene79280:CDS | 35.0% | |
| ACAGTGTGGCAATGTATTAA+AGG | - | chr1.4:56945661-56945680 | MS.gene79280:CDS | 35.0% | |
| AGATGCCTACACTTGATATA+TGG | + | chr1.4:56947254-56947273 | None:intergenic | 35.0% | |
| ATGGTCCATATATCAAGTGT+AGG | - | chr1.4:56947246-56947265 | MS.gene79280:intron | 35.0% | |
| CAAGTAGATGACCCAATTTA+AGG | + | chr1.4:56945556-56945575 | None:intergenic | 35.0% | |
| CAGTGTGGCAATGTATTAAA+GGG | - | chr1.4:56945662-56945681 | MS.gene79280:CDS | 35.0% | |
| CTAGTCACACTCTTATTACT+TGG | + | chr1.4:56946580-56946599 | None:intergenic | 35.0% | |
| CTATGACCACTTTCATGATA+AGG | + | chr1.4:56946660-56946679 | None:intergenic | 35.0% | |
| CTGATGACAAAGATGATCTA+AGG | - | chr1.4:56948785-56948804 | MS.gene79280:CDS | 35.0% | |
| GAAACTGAAGTCTCAAATGA+AGG | - | chr1.4:56949381-56949400 | MS.gene79280:intron | 35.0% | |
| GAAATGCTTCCTGTTTCAAA+TGG | + | chr1.4:56946814-56946833 | None:intergenic | 35.0% | |
| GATAACCAGTATAGGAATAG+TGG | - | chr1.4:56949233-56949252 | MS.gene79280:intron | 35.0% | |
| GCTAAAATGCCTTTATCTTC+AGG | - | chr1.4:56948961-56948980 | MS.gene79280:intron | 35.0% | |
| GCTTCGTAATATTGAAAAGC+AGG | - | chr1.4:56945190-56945209 | MS.gene79280:intron | 35.0% | |
| GGTGGAACAATTTATGCAAA+TGG | - | chr1.4:56947480-56947499 | MS.gene79280:intron | 35.0% | |
| GTCAGGAAAAGCAAAATCAT+GGG | - | chr1.4:56946020-56946039 | MS.gene79280:intron | 35.0% | |
| GTTCCATTCTTTGACTATAC+TGG | - | chr1.4:56945238-56945257 | MS.gene79280:intron | 35.0% | |
| TAATGAAAAGAGCCTGTCTT+CGG | + | chr1.4:56946403-56946422 | None:intergenic | 35.0% | |
| TATTTATTAGGCATCTGGTC+GGG | - | chr1.4:56945971-56945990 | MS.gene79280:intron | 35.0% | |
| TGGAAAAACCTGCATTAGAT+AGG | - | chr1.4:56947811-56947830 | MS.gene79280:intron | 35.0% | |
| TTATCCATCCTATCATCCTT+AGG | + | chr1.4:56945908-56945927 | None:intergenic | 35.0% | |
| TTCAATCACAATGTCATGTC+AGG | + | chr1.4:56947740-56947759 | None:intergenic | 35.0% | |
| TTGAGTATCCTAAGGATGAT+AGG | - | chr1.4:56945897-56945916 | MS.gene79280:intron | 35.0% | |
| TTTCTTTCGAGCTTCATCTA+TGG | + | chr1.4:56948701-56948720 | None:intergenic | 35.0% | |
| ! | AGTTGATTGGTCCTTTAAGT+TGG | - | chr1.4:56948889-56948908 | MS.gene79280:intron | 35.0% |
| ! | CAAGTAATAAGAGTGTGACT+AGG | - | chr1.4:56946578-56946597 | MS.gene79280:intron | 35.0% |
| ! | TAGTCGTGGATTTTCTACTT+AGG | - | chr1.4:56947882-56947901 | MS.gene79280:intron | 35.0% |
| ! | TATCTAATGCAGGTTTTTCC+AGG | + | chr1.4:56947812-56947831 | None:intergenic | 35.0% |
| ! | TGCAAAAAGGTGTGTAAAGA+TGG | - | chr1.4:56948407-56948426 | MS.gene79280:intron | 35.0% |
| ! | TGCTGAAAGCACAATGAAAT+TGG | - | chr1.4:56946192-56946211 | MS.gene79280:intron | 35.0% |
| ! | TGTTTACAGTTTGCGGTTTT+TGG | - | chr1.4:56948030-56948049 | MS.gene79280:CDS | 35.0% |
| !! | GATCAAACTTAGTTCTGTAC+AGG | + | chr1.4:56947991-56948010 | None:intergenic | 35.0% |
| !!! | CTGTAGTTTTGAGTATCCTA+AGG | - | chr1.4:56945889-56945908 | MS.gene79280:intron | 35.0% |
| !!! | CTTTTTGGAATATAAGAGCC+TGG | - | chr1.4:56947791-56947810 | MS.gene79280:intron | 35.0% |
| AAGTATGGAAATGCAGCTGA+TGG | - | chr1.4:56949418-56949437 | MS.gene79280:intron | 40.0% | |
| AATAGGGCGATAACCAGTAT+AGG | - | chr1.4:56949225-56949244 | MS.gene79280:intron | 40.0% | |
| AATGAAAAGAGCCTGTCTTC+GGG | + | chr1.4:56946402-56946421 | None:intergenic | 40.0% | |
| ACCTCATACAGCTTCTCATT+TGG | + | chr1.4:56949101-56949120 | None:intergenic | 40.0% | |
| ACGAAGCTCTTCATGAAGTT+TGG | + | chr1.4:56945177-56945196 | None:intergenic | 40.0% | |
| AGGGTATGATCAACTAAGCT+AGG | + | chr1.4:56948556-56948575 | None:intergenic | 40.0% | |
| AGTATGGAAATGCAGCTGAT+GGG | - | chr1.4:56949419-56949438 | MS.gene79280:intron | 40.0% | |
| ATGTAGTAACTACCTTGCTC+CGG | + | chr1.4:56948190-56948209 | None:intergenic | 40.0% | |
| CAGTGTTCTTTGTTGACGAT+AGG | + | chr1.4:56945700-56945719 | None:intergenic | 40.0% | |
| CTACCTGTTCTTTCAGTACT+TGG | - | chr1.4:56945803-56945822 | MS.gene79280:intron | 40.0% | |
| CTCGACACAGGTTTATGATA+TGG | - | chr1.4:56945613-56945632 | MS.gene79280:intron | 40.0% | |
| CTTGACCACTATTCCTATAC+TGG | + | chr1.4:56949241-56949260 | None:intergenic | 40.0% | |
| GACATTGTGATTGAACATGC+TGG | - | chr1.4:56947745-56947764 | MS.gene79280:intron | 40.0% | |
| GGGAAGTCAGCTTAAGAAAT+TGG | - | chr1.4:56948729-56948748 | MS.gene79280:intron | 40.0% | |
| GGTCAGGAAAAGCAAAATCA+TGG | - | chr1.4:56946019-56946038 | MS.gene79280:intron | 40.0% | |
| GTAGAAAATCCACGACTACT+AGG | + | chr1.4:56947880-56947899 | None:intergenic | 40.0% | |
| GTAGGCATCTTATCTCAACA+GGG | - | chr1.4:56947264-56947283 | MS.gene79280:intron | 40.0% | |
| GTATCCTAAGGATGATAGGA+TGG | - | chr1.4:56945901-56945920 | MS.gene79280:intron | 40.0% | |
| TAAAGCCATTCAGCTTGAGA+CGG | + | chr1.4:56949337-56949356 | None:intergenic | 40.0% | |
| TAGGAATAGTGGTCAAGCTT+TGG | - | chr1.4:56949244-56949263 | MS.gene79280:intron | 40.0% | |
| TATAGGGGTAAACCGAAGAA+AGG | - | chr1.4:56947644-56947663 | MS.gene79280:intron | 40.0% | |
| TCCAAATGAGAAGCTGTATG+AGG | - | chr1.4:56949097-56949116 | MS.gene79280:intron | 40.0% | |
| TGGGTCACACTCTTATTACT+TGG | + | chr1.4:56946520-56946539 | None:intergenic | 40.0% | |
| TGTAGGCATCTTATCTCAAC+AGG | - | chr1.4:56947263-56947282 | MS.gene79280:intron | 40.0% | |
| TTTGGATCTGCAACTGAAAG+AGG | + | chr1.4:56949083-56949102 | None:intergenic | 40.0% | |
| ! | AATTTTTGTGATCCGGAGCA+AGG | - | chr1.4:56948175-56948194 | MS.gene79280:intron | 40.0% |
| ! | ATAAGAGTGTGACTAGGTCT+TGG | - | chr1.4:56946584-56946603 | MS.gene79280:intron | 40.0% |
| ! | ATGAGAGTACAGGAACTGTT+AGG | - | chr1.4:56948827-56948846 | MS.gene79280:intron | 40.0% |
| ! | ATTTGGGACACTGAAAAGCT+TGG | - | chr1.4:56948229-56948248 | MS.gene79280:intron | 40.0% |
| ! | GAGGGATCATTTTATGGGAT+AGG | + | chr1.4:56947192-56947211 | None:intergenic | 40.0% |
| ! | GATCTCCCATCTGAGATAAA+TGG | + | chr1.4:56947435-56947454 | None:intergenic | 40.0% |
| ! | GTGTATTTTGTTCTCGACAC+AGG | - | chr1.4:56945601-56945620 | MS.gene79280:intron | 40.0% |
| ! | TAATGCAGGGGAAAGTTGAT+TGG | - | chr1.4:56948876-56948895 | MS.gene79280:intron | 40.0% |
| ! | TCAGATGGGAGATCAGATTT+TGG | - | chr1.4:56947441-56947460 | MS.gene79280:intron | 40.0% |
| ! | TCTTTGATACACGGAGTACT+AGG | - | chr1.4:56946922-56946941 | MS.gene79280:intron | 40.0% |
| ! | TTTTTGTTGGCAGCTTGAAG+CGG | - | chr1.4:56946361-56946380 | MS.gene79280:intron | 40.0% |
| !! | AGATGATCTAAGGGTTGATG+AGG | - | chr1.4:56948795-56948814 | MS.gene79280:CDS | 40.0% |
| !! | CTACCAAGTACTGAAAGAAC+AGG | + | chr1.4:56945809-56945828 | None:intergenic | 40.0% |
| !! | GGCAAGATTTCTTTGAAGCT+TGG | + | chr1.4:56948535-56948554 | None:intergenic | 40.0% |
| !! | TGAAACAGGAAGCATTTCAG+AGG | - | chr1.4:56946816-56946835 | MS.gene79280:intron | 40.0% |
| !! | TGGTCAAGCTTTGGAATTCA+AGG | - | chr1.4:56949253-56949272 | MS.gene79280:intron | 40.0% |
| !! | TTACAGTTTGCGGTTTTTGG+TGG | - | chr1.4:56948033-56948052 | MS.gene79280:CDS | 40.0% |
| !! | TTTGGCTCTTCTACTAAGCA+AGG | + | chr1.4:56945159-56945178 | None:intergenic | 40.0% |
| !!! | TACAGTTTGCGGTTTTTGGT+GGG | - | chr1.4:56948034-56948053 | MS.gene79280:CDS | 40.0% |
| AAGAGATGCGAAGAGAGCAA+GGG | - | chr1.4:56947679-56947698 | MS.gene79280:intron | 45.0% | |
| AAGGAAGCCAACATTGCTGA+AGG | + | chr1.4:56945140-56945159 | None:intergenic | 45.0% | |
| AATACATTGCCACACTGTCC+AGG | + | chr1.4:56945659-56945678 | None:intergenic | 45.0% | |
| ACCTGCATTAGATAGGCCAT+TGG | - | chr1.4:56947818-56947837 | MS.gene79280:intron | 45.0% | |
| ACGCAGGTTCCTGAAGATAA+AGG | + | chr1.4:56948973-56948992 | None:intergenic | 45.0% | |
| ACTCACTGTGATACTGTGCT+GGG | - | chr1.4:56946074-56946093 | MS.gene79280:intron | 45.0% | |
| AGGAAGCCAACATTGCTGAA+GGG | + | chr1.4:56945139-56945158 | None:intergenic | 45.0% | |
| GAAAATCAGAAACACACCGC+TGG | + | chr1.4:56946441-56946460 | None:intergenic | 45.0% | |
| GAGGAATTGCAGAGATCCAA+TGG | + | chr1.4:56947837-56947856 | None:intergenic | 45.0% | |
| GGTAAACCGAAGAAAGGAAG+AGG | - | chr1.4:56947650-56947669 | MS.gene79280:intron | 45.0% | |
| GTATGGAAATGCAGCTGATG+GGG | - | chr1.4:56949420-56949439 | MS.gene79280:intron | 45.0% | |
| GTTGAGTTAAGAGTTTCGCG+TGG | - | chr1.4:56946758-56946777 | MS.gene79280:CDS | 45.0% | |
| TACTCACTGTGATACTGTGC+TGG | - | chr1.4:56946073-56946092 | MS.gene79280:intron | 45.0% | |
| TCCAATGGCCTATCTAATGC+AGG | + | chr1.4:56947822-56947841 | None:intergenic | 45.0% | |
| TCTTCAGGAACCTGCGTATT+CGG | - | chr1.4:56948976-56948995 | MS.gene79280:intron | 45.0% | |
| TTGGAGAAGAACAGCCAAAC+TGG | - | chr1.4:56948748-56948767 | MS.gene79280:CDS | 45.0% | |
| TTTGGTCCTGGTCGATCAAA+AGG | - | chr1.4:56947459-56947478 | MS.gene79280:intron | 45.0% | |
| ! | AATCCAGAGTACCACTACCT+TGG | - | chr1.4:56948057-56948076 | MS.gene79280:CDS | 45.0% |
| ! | TCACGCATTGACCTAGTCTT+GGG | + | chr1.4:56949056-56949075 | None:intergenic | 45.0% |
| ! | TTCACGCATTGACCTAGTCT+TGG | + | chr1.4:56949057-56949076 | None:intergenic | 45.0% |
| ! | TTTCCAAGGTAGTGGTACTC+TGG | + | chr1.4:56948063-56948082 | None:intergenic | 45.0% |
| !! | ATATTGGCTCCTAGTAGTCG+TGG | - | chr1.4:56947868-56947887 | MS.gene79280:intron | 45.0% |
| !! | GCAAAGGTTGATGAGAGTAC+AGG | - | chr1.4:56948817-56948836 | MS.gene79280:CDS | 45.0% |
| !! | TCTAAGGGTTGATGAGGCAA+AGG | - | chr1.4:56948801-56948820 | MS.gene79280:CDS | 45.0% |
| !! | TAAAAATATATAGTTATTTA+TGG | - | chr1.4:56946251-56946270 | MS.gene79280:intron | 5.0% |
| !! | TCAAATAAAAAATTAATAAA+AGG | + | chr1.4:56945333-56945352 | None:intergenic | 5.0% |
| !!! | ATCATTTTTTTTTTTTAATA+AGG | + | chr1.4:56948576-56948595 | None:intergenic | 5.0% |
| !!! | TCATTTTTTTTTTTTAATAA+GGG | + | chr1.4:56948575-56948594 | None:intergenic | 5.0% |
| !!! | TTTTAATAAAAATTATGATT+AGG | + | chr1.4:56948512-56948531 | None:intergenic | 5.0% |
| CAAGAGATGCGAAGAGAGCA+AGG | - | chr1.4:56947678-56947697 | MS.gene79280:intron | 50.0% | |
| CACACTACGATCCCAAGACT+AGG | - | chr1.4:56949042-56949061 | MS.gene79280:intron | 50.0% | |
| CATCTCCGTCTCAAGCTGAA+TGG | - | chr1.4:56949329-56949348 | MS.gene79280:CDS | 50.0% | |
| CTTCAGGAACCTGCGTATTC+GGG | - | chr1.4:56948977-56948996 | MS.gene79280:intron | 50.0% | |
| CTTGCTCTCTTCGCATCTCT+TGG | + | chr1.4:56947680-56947699 | None:intergenic | 50.0% | |
| GAAAGTTTCAGCCCGAAGAC+AGG | - | chr1.4:56946388-56946407 | MS.gene79280:intron | 50.0% | |
| GAAGAACAGCCAAACTGGTG+AGG | - | chr1.4:56948753-56948772 | MS.gene79280:CDS | 50.0% | |
| GGGACACTGAAAAGCTTGGA+TGG | - | chr1.4:56948233-56948252 | MS.gene79280:intron | 50.0% | |
| GGTGAACCCTTCAGCAATGT+TGG | - | chr1.4:56945130-56945149 | MS.gene79280:CDS | 50.0% | |
| TTACAGGATCCTGGACAGTG+TGG | - | chr1.4:56945647-56945666 | MS.gene79280:CDS | 50.0% | |
| TTGCCACATCCTCACCAGTT+TGG | + | chr1.4:56948765-56948784 | None:intergenic | 50.0% | |
| ! | GTTCCACCTTTTGATCGACC+AGG | + | chr1.4:56947468-56947487 | None:intergenic | 50.0% |
| !! | CAGAAGTGTCAGTGCTACAG+AGG | - | chr1.4:56945463-56945482 | MS.gene79280:CDS | 50.0% |
| !! | GGGAGATCAGATTTTGGTCC+TGG | - | chr1.4:56947447-56947466 | MS.gene79280:intron | 50.0% |
| ATCTTCAGTGACCTCGCCAG+CGG | - | chr1.4:56946422-56946441 | MS.gene79280:CDS | 55.0% | |
| CAGCCAAACTGGTGAGGATG+TGG | - | chr1.4:56948759-56948778 | MS.gene79280:CDS | 55.0% | |
| GAAGCACGGACACAACAACG+CGG | - | chr1.4:56945380-56945399 | MS.gene79280:CDS | 55.0% | |
| GGCGCACCTCTTCCTTTCTT+CGG | + | chr1.4:56947659-56947678 | None:intergenic | 55.0% | |
| GGTCCTGGTCGATCAAAAGG+TGG | - | chr1.4:56947462-56947481 | MS.gene79280:intron | 55.0% | |
| TAGGCAGAAGAGCTTGCAGC+TGG | - | chr1.4:56947326-56947345 | MS.gene79280:intron | 55.0% | |
| ! | ACACGGAGTACTAGGAACCC+TGG | - | chr1.4:56946930-56946949 | MS.gene79280:intron | 55.0% |
| CAGGAACCTGCGTATTCGGG+AGG | - | chr1.4:56948980-56948999 | MS.gene79280:intron | 60.0% | |
| GAGCTTGCAGCTGGACGAGA+CGG | - | chr1.4:56947335-56947354 | MS.gene79280:intron | 60.0% | |
| TCAGAAACACACCGCTGGCG+AGG | + | chr1.4:56946436-56946455 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 56945008 | 56949459 | 56945008 | ID=MS.gene79280 |
| chr1.4 | mRNA | 56945008 | 56949459 | 56945008 | ID=MS.gene79280.t1;Parent=MS.gene79280 |
| chr1.4 | exon | 56949447 | 56949459 | 56949447 | ID=MS.gene79280.t1.exon1;Parent=MS.gene79280.t1 |
| chr1.4 | CDS | 56949447 | 56949459 | 56949447 | ID=cds.MS.gene79280.t1;Parent=MS.gene79280.t1 |
| chr1.4 | exon | 56949256 | 56949350 | 56949256 | ID=MS.gene79280.t1.exon2;Parent=MS.gene79280.t1 |
| chr1.4 | CDS | 56949256 | 56949350 | 56949256 | ID=cds.MS.gene79280.t1;Parent=MS.gene79280.t1 |
| chr1.4 | exon | 56948744 | 56948844 | 56948744 | ID=MS.gene79280.t1.exon3;Parent=MS.gene79280.t1 |
| chr1.4 | CDS | 56948744 | 56948844 | 56948744 | ID=cds.MS.gene79280.t1;Parent=MS.gene79280.t1 |
| chr1.4 | exon | 56948024 | 56948093 | 56948024 | ID=MS.gene79280.t1.exon4;Parent=MS.gene79280.t1 |
| chr1.4 | CDS | 56948024 | 56948093 | 56948024 | ID=cds.MS.gene79280.t1;Parent=MS.gene79280.t1 |
| chr1.4 | exon | 56947111 | 56947138 | 56947111 | ID=MS.gene79280.t1.exon5;Parent=MS.gene79280.t1 |
| chr1.4 | CDS | 56947111 | 56947138 | 56947111 | ID=cds.MS.gene79280.t1;Parent=MS.gene79280.t1 |
| chr1.4 | exon | 56946962 | 56947022 | 56946962 | ID=MS.gene79280.t1.exon6;Parent=MS.gene79280.t1 |
| chr1.4 | CDS | 56946962 | 56947022 | 56946962 | ID=cds.MS.gene79280.t1;Parent=MS.gene79280.t1 |
| chr1.4 | exon | 56946717 | 56946818 | 56946717 | ID=MS.gene79280.t1.exon7;Parent=MS.gene79280.t1 |
| chr1.4 | CDS | 56946717 | 56946818 | 56946717 | ID=cds.MS.gene79280.t1;Parent=MS.gene79280.t1 |
| chr1.4 | exon | 56946403 | 56946470 | 56946403 | ID=MS.gene79280.t1.exon8;Parent=MS.gene79280.t1 |
| chr1.4 | CDS | 56946403 | 56946470 | 56946403 | ID=cds.MS.gene79280.t1;Parent=MS.gene79280.t1 |
| chr1.4 | exon | 56945619 | 56945781 | 56945619 | ID=MS.gene79280.t1.exon9;Parent=MS.gene79280.t1 |
| chr1.4 | CDS | 56945619 | 56945781 | 56945619 | ID=cds.MS.gene79280.t1;Parent=MS.gene79280.t1 |
| chr1.4 | exon | 56945349 | 56945484 | 56945349 | ID=MS.gene79280.t1.exon10;Parent=MS.gene79280.t1 |
| chr1.4 | CDS | 56945349 | 56945484 | 56945349 | ID=cds.MS.gene79280.t1;Parent=MS.gene79280.t1 |
| chr1.4 | exon | 56945008 | 56945160 | 56945008 | ID=MS.gene79280.t1.exon11;Parent=MS.gene79280.t1 |
| chr1.4 | CDS | 56945008 | 56945160 | 56945008 | ID=cds.MS.gene79280.t1;Parent=MS.gene79280.t1 |
| Gene Sequence |
| Protein sequence |
