Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79690.t1 | XP_013444760.1 | 81.6 | 179 | 33 | 0 | 4 | 182 | 51 | 229 | 1.80E-76 | 295.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79690.t1 | A0A072TZ19 | 81.6 | 179 | 33 | 0 | 4 | 182 | 51 | 229 | 1.3e-76 | 295.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79690 | MS.gene043435 | PPI |
| MS.gene79690 | MS.gene60861 | PPI |
| MS.gene79690 | MS.gene005399 | PPI |
| MS.gene79690 | MS.gene001687 | PPI |
| MS.gene79690 | MS.gene005865 | PPI |
| MS.gene79690 | MS.gene066059 | PPI |
| MS.gene79690 | MS.gene21110 | PPI |
| MS.gene79690 | MS.gene036564 | PPI |
| MS.gene79690 | MS.gene31468 | PPI |
| MS.gene79690 | MS.gene026968 | PPI |
| MS.gene79690 | MS.gene21111 | PPI |
| MS.gene79690 | MS.gene34167 | PPI |
| MS.gene79690 | MS.gene028903 | PPI |
| MS.gene79690 | MS.gene21227 | PPI |
| MS.gene79690 | MS.gene055808 | PPI |
| MS.gene79690 | MS.gene035256 | PPI |
| MS.gene79690 | MS.gene20938 | PPI |
| MS.gene79690 | MS.gene60589 | PPI |
| MS.gene79690 | MS.gene82915 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79690.t1 | MTR_8g028485 | 97.207 | 179 | 5 | 0 | 4 | 182 | 51 | 229 | 3.50e-132 | 369 |
| MS.gene79690.t1 | MTR_8g087440 | 97.765 | 179 | 4 | 0 | 4 | 182 | 51 | 229 | 5.25e-132 | 369 |
| MS.gene79690.t1 | MTR_7g117435 | 86.861 | 137 | 18 | 0 | 1 | 137 | 1 | 137 | 1.77e-80 | 235 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79690.t1 | AT1G14620 | 72.222 | 180 | 50 | 0 | 3 | 182 | 54 | 233 | 2.12e-100 | 289 |
| MS.gene79690.t1 | AT1G14620 | 71.429 | 133 | 38 | 0 | 3 | 135 | 54 | 186 | 1.08e-69 | 211 |
Find 32 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTCTATGGTGATGCTTA+TGG | 0.140363 | 8.4:+67335254 | MS.gene79690:CDS |
| TTCTCTATGGTGATGCTTAT+GGG | 0.182684 | 8.4:+67335255 | MS.gene79690:CDS |
| GATCCTGTCTGCTCTTCTTT+AGG | 0.268390 | 8.4:-67335692 | None:intergenic |
| AGACTTTACCTTCTTCTCTA+TGG | 0.321156 | 8.4:+67335242 | MS.gene79690:CDS |
| GCTTCGGTGATTCGCGGTGC+TGG | 0.381981 | 8.4:-67334618 | None:intergenic |
| ATCTCCTACAACTGATTTCA+AGG | 0.385546 | 8.4:-67335615 | None:intergenic |
| GCAAATGCGAGGACTTTGTT+TGG | 0.409693 | 8.4:+67336013 | MS.gene79690:CDS |
| CAAATGCGAGGACTTTGTTT+GGG | 0.426350 | 8.4:+67336014 | MS.gene79690:CDS |
| GGTGACTAAGGATGAATTGA+TGG | 0.429874 | 8.4:+67336035 | MS.gene79690:CDS |
| AAATGCTCCGATGGCTCATA+TGG | 0.433853 | 8.4:+67335661 | MS.gene79690:CDS |
| GGACTTTGTTTGGGTGACTA+AGG | 0.440940 | 8.4:+67336023 | MS.gene79690:CDS |
| TCTGCCTTGAAATCAGTTGT+AGG | 0.477251 | 8.4:+67335611 | MS.gene79690:CDS |
| TCTCTTTAGGTCACTACAAA+GGG | 0.480712 | 8.4:+67335208 | MS.gene79690:intron |
| TGCCACACAGGCTTTCCACT+TGG | 0.491497 | 8.4:-67335281 | None:intergenic |
| TTTCAATGGCTAGGTTTCGA+TGG | 0.497557 | 8.4:+67333782 | None:intergenic |
| AAGCATCACCATAGAGAAGA+AGG | 0.501775 | 8.4:-67335250 | None:intergenic |
| TTTATGGGGTTTCAATGGCT+AGG | 0.507564 | 8.4:+67333773 | None:intergenic |
| TCTCTATGGTGATGCTTATG+GGG | 0.516069 | 8.4:+67335256 | MS.gene79690:CDS |
| GGATCTGTCTAGAAATTCAT+CGG | 0.534929 | 8.4:-67333830 | None:intergenic |
| GTCTCTTTAGGTCACTACAA+AGG | 0.536519 | 8.4:+67335207 | MS.gene79690:intron |
| GATCTGTCTAGAAATTCATC+GGG | 0.564894 | 8.4:-67333829 | None:intergenic |
| CAGCCTAAAGAAGAGCAGAC+AGG | 0.565138 | 8.4:+67335689 | MS.gene79690:CDS |
| TTGTCTGCTTCGGTGATTCG+CGG | 0.572285 | 8.4:-67334624 | None:intergenic |
| ATCAGAGGATACTATGCGTA+AGG | 0.577968 | 8.4:+67335325 | MS.gene79690:CDS |
| TTCTAGACAGATCCGATGCA+AGG | 0.596915 | 8.4:+67333839 | MS.gene79690:CDS |
| CTCCAAGTGGAAAGCCTGTG+TGG | 0.603277 | 8.4:+67335279 | MS.gene79690:CDS |
| TGAGTACCCATACCTTGCAT+CGG | 0.607480 | 8.4:-67333851 | None:intergenic |
| CAATGGCTAGGTTTCGATGG+CGG | 0.614979 | 8.4:+67333785 | None:intergenic |
| TGAACAACCATATGAGCCAT+CGG | 0.625422 | 8.4:-67335668 | None:intergenic |
| CAGACAAACAAAATGATCGA+AGG | 0.632787 | 8.4:+67334640 | MS.gene79690:CDS |
| GTTCGACATTGGCAAATGCG+AGG | 0.666005 | 8.4:+67336002 | MS.gene79690:CDS |
| GATGCTTATGGGGCTCCAAG+TGG | 0.683285 | 8.4:+67335266 | MS.gene79690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATATTTTTTCGTTTAT+GGG | + | chr8.4:67334126-67334145 | MS.gene79690:intron | 10.0% |
| !! | ACACGATAAAAAAATAATAA+AGG | - | chr8.4:67334939-67334958 | None:intergenic | 15.0% |
| !!! | CTTTTATATTTTTTCGTTTA+TGG | + | chr8.4:67334125-67334144 | MS.gene79690:intron | 15.0% |
| !! | AAATATCAGTTACTTGTTTA+CGG | - | chr8.4:67334436-67334455 | None:intergenic | 20.0% |
| !! | AAATGTTTCATTTCAATTTC+TGG | + | chr8.4:67334708-67334727 | MS.gene79690:intron | 20.0% |
| !! | AAGATATATGAAATACAAAG+GGG | - | chr8.4:67335372-67335391 | None:intergenic | 20.0% |
| !! | GAAGATATATGAAATACAAA+GGG | - | chr8.4:67335373-67335392 | None:intergenic | 20.0% |
| !! | TACTGATAGAAATAACATAT+TGG | - | chr8.4:67335788-67335807 | None:intergenic | 20.0% |
| !! | TTTGTATTTCATATATCTTC+CGG | + | chr8.4:67335373-67335392 | MS.gene79690:intron | 20.0% |
| !!! | ATAAATCAGAAGTATTGAAA+AGG | - | chr8.4:67335885-67335904 | None:intergenic | 20.0% |
| !!! | TGAAATGAAACATTTTCTAA+TGG | - | chr8.4:67334703-67334722 | None:intergenic | 20.0% |
| !!! | TTTTACTATAGATGTTCTTA+TGG | + | chr8.4:67334881-67334900 | MS.gene79690:intron | 20.0% |
| ! | AAACCAAGCTAATAATTCAT+TGG | - | chr8.4:67334796-67334815 | None:intergenic | 25.0% |
| ! | AACTAATAAACTTGAATAGC+CGG | - | chr8.4:67334075-67334094 | None:intergenic | 25.0% |
| ! | AATATCAGTTACTTGTTTAC+GGG | - | chr8.4:67334435-67334454 | None:intergenic | 25.0% |
| ! | ATGAAAATTGTTTACTTTCC+AGG | + | chr8.4:67334565-67334584 | MS.gene79690:intron | 25.0% |
| ! | ATTAGCAATGATAAAGCAAA+TGG | - | chr8.4:67335121-67335140 | None:intergenic | 25.0% |
| ! | GATTCTATTATCTAAGAAAC+AGG | - | chr8.4:67335053-67335072 | None:intergenic | 25.0% |
| ! | GGAAGATATATGAAATACAA+AGG | - | chr8.4:67335374-67335393 | None:intergenic | 25.0% |
| ! | TGAAAATTGTTTACTTTCCA+GGG | + | chr8.4:67334566-67334585 | MS.gene79690:intron | 25.0% |
| !! | AGAAAAAGTATATGAATCAG+AGG | + | chr8.4:67335310-67335329 | MS.gene79690:CDS | 25.0% |
| !! | CTTTCGAATACATATTTTGT+CGG | + | chr8.4:67335638-67335657 | MS.gene79690:CDS | 25.0% |
| !!! | AGTATTGAAAAGGCTAATTT+TGG | - | chr8.4:67335875-67335894 | None:intergenic | 25.0% |
| !!! | ATCTTTTAAGGTATGCTTAT+AGG | + | chr8.4:67335718-67335737 | MS.gene79690:intron | 25.0% |
| !!! | CACATTTCAATCTTTTTTGT+AGG | - | chr8.4:67334318-67334337 | None:intergenic | 25.0% |
| !!! | CATTGATTCATTTAAAAGAG+AGG | + | chr8.4:67333910-67333929 | MS.gene79690:intron | 25.0% |
| !!! | GTGTTTTAGCTTTGTAATAT+TGG | + | chr8.4:67334955-67334974 | MS.gene79690:intron | 25.0% |
| !!! | TCTGATTCATATACTTTTTC+TGG | - | chr8.4:67335311-67335330 | None:intergenic | 25.0% |
| !!! | TTATTTCTATCAGTATGTGT+TGG | + | chr8.4:67335793-67335812 | MS.gene79690:intron | 25.0% |
| !!! | TTTTCTGAAAATGACTTTGT+AGG | + | chr8.4:67335818-67335837 | MS.gene79690:intron | 25.0% |
| AAAATTGTTTACTTTCCAGG+GGG | + | chr8.4:67334568-67334587 | MS.gene79690:intron | 30.0% | |
| AAATATATCAATGTGAGGAC+AGG | + | chr8.4:67335012-67335031 | MS.gene79690:intron | 30.0% | |
| AAATGATCAGTCTGCTAAAT+TGG | - | chr8.4:67334672-67334691 | None:intergenic | 30.0% | |
| ACTATAGATGTTCTTATGGA+AGG | + | chr8.4:67334885-67334904 | MS.gene79690:intron | 30.0% | |
| AGATGAAAAGAAGGATCTAT+TGG | - | chr8.4:67334539-67334558 | None:intergenic | 30.0% | |
| CATGATAGTAGATGAAAAGA+AGG | - | chr8.4:67334548-67334567 | None:intergenic | 30.0% | |
| CATTTCTGTCATCACTTAAA+CGG | - | chr8.4:67333950-67333969 | None:intergenic | 30.0% | |
| CTATAGTTATATCATCGCTA+AGG | - | chr8.4:67335415-67335434 | None:intergenic | 30.0% | |
| CTGAGAAATATATCAATGTG+AGG | + | chr8.4:67335007-67335026 | MS.gene79690:intron | 30.0% | |
| GAAAATTGTTTACTTTCCAG+GGG | + | chr8.4:67334567-67334586 | MS.gene79690:intron | 30.0% | |
| GTAAGGTGAACATTCTTATA+TGG | + | chr8.4:67335342-67335361 | MS.gene79690:intron | 30.0% | |
| TAAAACCACACCAAAGAAAA+AGG | - | chr8.4:67334858-67334877 | None:intergenic | 30.0% | |
| TACTTCAATCTACTATTGGA+AGG | + | chr8.4:67335752-67335771 | MS.gene79690:intron | 30.0% | |
| TATGCTTATAGGAATTTGTG+TGG | + | chr8.4:67335729-67335748 | MS.gene79690:intron | 30.0% | |
| TCTCCAATGAATTATTAGCT+TGG | + | chr8.4:67334790-67334809 | MS.gene79690:intron | 30.0% | |
| ! | ACTTCTGATTTATTTCTCTG+TGG | + | chr8.4:67335892-67335911 | MS.gene79690:intron | 30.0% |
| ! | ATATTTTATGAAGAGTGACG+TGG | + | chr8.4:67334450-67334469 | MS.gene79690:intron | 30.0% |
| !! | ATCATTTTGTTTGTCTGCTT+CGG | - | chr8.4:67334637-67334656 | None:intergenic | 30.0% |
| !!! | TTTTTTCGTTTATGGGTTGA+TGG | + | chr8.4:67334133-67334152 | MS.gene79690:intron | 30.0% |
| AAAATAAAGCAGCAGAAACG+TGG | - | chr8.4:67334046-67334065 | None:intergenic | 35.0% | |
| AGACTTTACCTTCTTCTCTA+TGG | + | chr8.4:67335242-67335261 | MS.gene79690:CDS | 35.0% | |
| AGAGGATATAGACAAAAGCT+TGG | - | chr8.4:67334510-67334529 | None:intergenic | 35.0% | |
| AGGATCTATTGGTATTTGAG+AGG | - | chr8.4:67334528-67334547 | None:intergenic | 35.0% | |
| CAACATGCACTATGCAATAA+AGG | - | chr8.4:67335538-67335557 | None:intergenic | 35.0% | |
| CAGACAAACAAAATGATCGA+AGG | + | chr8.4:67334640-67334659 | MS.gene79690:CDS | 35.0% | |
| CGTTTAAGTGATGACAGAAA+TGG | + | chr8.4:67333948-67333967 | MS.gene79690:intron | 35.0% | |
| GATCTGTCTAGAAATTCATC+GGG | - | chr8.4:67333832-67333851 | None:intergenic | 35.0% | |
| GCTAAAAACAAGTTCGACAT+TGG | + | chr8.4:67335991-67336010 | MS.gene79690:CDS | 35.0% | |
| GGATCTGTCTAGAAATTCAT+CGG | - | chr8.4:67333833-67333852 | None:intergenic | 35.0% | |
| GTGGTACTTCAATCTACTAT+TGG | + | chr8.4:67335748-67335767 | MS.gene79690:intron | 35.0% | |
| TCAAATGAGTGTGTGTTCAT+AGG | + | chr8.4:67334477-67334496 | MS.gene79690:intron | 35.0% | |
| TCGTCAAATAGTTGCTATAG+TGG | + | chr8.4:67335498-67335517 | MS.gene79690:intron | 35.0% | |
| TCTCTTTAGGTCACTACAAA+GGG | + | chr8.4:67335208-67335227 | MS.gene79690:intron | 35.0% | |
| TGAACACACACTCATTTGAT+AGG | - | chr8.4:67334476-67334495 | None:intergenic | 35.0% | |
| TGTACAACCAAACAAAGCAA+AGG | - | chr8.4:67335844-67335863 | None:intergenic | 35.0% | |
| ! | AATGTCCTTTTTCTTTGGTG+TGG | + | chr8.4:67334850-67334869 | MS.gene79690:intron | 35.0% |
| ! | ATCTCCTACAACTGATTTCA+AGG | - | chr8.4:67335618-67335637 | None:intergenic | 35.0% |
| ! | GACAGGATCAACATCTTTTA+AGG | + | chr8.4:67335706-67335725 | MS.gene79690:CDS | 35.0% |
| ! | GAGCAAATGTCCTTTTTCTT+TGG | + | chr8.4:67334845-67334864 | MS.gene79690:intron | 35.0% |
| ! | TTCTCTATGGTGATGCTTAT+GGG | + | chr8.4:67335255-67335274 | MS.gene79690:CDS | 35.0% |
| ! | TTGGTAGTAGCATTTCTCAT+CGG | - | chr8.4:67333981-67334000 | None:intergenic | 35.0% |
| ! | TTTAAAAACTCAGCTTGCTC+AGG | - | chr8.4:67336069-67336088 | None:intergenic | 35.0% |
| !!! | CGTTTCTGCTGCTTTATTTT+TGG | + | chr8.4:67334046-67334065 | MS.gene79690:intron | 35.0% |
| AAGCATCACCATAGAGAAGA+AGG | - | chr8.4:67335253-67335272 | None:intergenic | 40.0% | |
| ATCAGAGGATACTATGCGTA+AGG | + | chr8.4:67335325-67335344 | MS.gene79690:CDS | 40.0% | |
| CTGACAGAAGATTTCAGCAA+AGG | - | chr8.4:67335944-67335963 | None:intergenic | 40.0% | |
| CTTCAGAGATTATTGCTGTG+TGG | + | chr8.4:67335163-67335182 | MS.gene79690:intron | 40.0% | |
| GGTGACTAAGGATGAATTGA+TGG | + | chr8.4:67336035-67336054 | MS.gene79690:CDS | 40.0% | |
| GTATAGTTGAAGGATGGTGA+TGG | + | chr8.4:67334184-67334203 | MS.gene79690:intron | 40.0% | |
| GTCTCTTTAGGTCACTACAA+AGG | + | chr8.4:67335207-67335226 | MS.gene79690:intron | 40.0% | |
| TATCAATGTGAGGACAGGAT+AGG | + | chr8.4:67335017-67335036 | MS.gene79690:intron | 40.0% | |
| TCTGCCTTGAAATCAGTTGT+AGG | + | chr8.4:67335611-67335630 | MS.gene79690:CDS | 40.0% | |
| TGAACAACCATATGAGCCAT+CGG | - | chr8.4:67335671-67335690 | None:intergenic | 40.0% | |
| TGGTTGTAAAGATGAGGAAG+AGG | + | chr8.4:67334153-67334172 | MS.gene79690:intron | 40.0% | |
| TTGGCTGTATAGTTGAAGGA+TGG | + | chr8.4:67334178-67334197 | MS.gene79690:intron | 40.0% | |
| ! | CAAATGCGAGGACTTTGTTT+GGG | + | chr8.4:67336014-67336033 | MS.gene79690:CDS | 40.0% |
| ! | CTCTTGCTACTTGTCTCTTT+AGG | + | chr8.4:67335195-67335214 | MS.gene79690:intron | 40.0% |
| ! | CTTCTCTATGGTGATGCTTA+TGG | + | chr8.4:67335254-67335273 | MS.gene79690:CDS | 40.0% |
| ! | TAAAGATGAGGAAGAGGTGT+TGG | + | chr8.4:67334159-67334178 | MS.gene79690:intron | 40.0% |
| ! | TCTAAGAAACAGGAGAGCAT+TGG | - | chr8.4:67335043-67335062 | None:intergenic | 40.0% |
| ! | TCTCTATGGTGATGCTTATG+GGG | + | chr8.4:67335256-67335275 | MS.gene79690:CDS | 40.0% |
| ! | TGATGGATATGGCAGGTATT+CGG | + | chr8.4:67334225-67334244 | MS.gene79690:intron | 40.0% |
| ! | TTGTAGGCCTTTGCTTTGTT+TGG | + | chr8.4:67335834-67335853 | MS.gene79690:intron | 40.0% |
| !! | CTTCCGGTGTTGTTAAATAG+CGG | + | chr8.4:67335389-67335408 | MS.gene79690:intron | 40.0% |
| !! | GATGGAGGTTTTGATGGATA+TGG | + | chr8.4:67334214-67334233 | MS.gene79690:intron | 40.0% |
| !! | GGTTGATGGTTGTAAAGATG+AGG | + | chr8.4:67334147-67334166 | MS.gene79690:intron | 40.0% |
| !! | GGTTTAGATGGAGGTTTTGA+TGG | + | chr8.4:67334208-67334227 | MS.gene79690:intron | 40.0% |
| !! | TTTTCTGGAAAATGCCACAC+AGG | - | chr8.4:67335296-67335315 | None:intergenic | 40.0% |
| !!! | GCTGCTTTATTTTTGGCTAC+CGG | + | chr8.4:67334053-67334072 | MS.gene79690:intron | 40.0% |
| AAATGCTCCGATGGCTCATA+TGG | + | chr8.4:67335661-67335680 | MS.gene79690:CDS | 45.0% | |
| ACAGATCCGATGCAAGGTAT+GGG | + | chr8.4:67333845-67333864 | MS.gene79690:intron | 45.0% | |
| AGGCCGCTATTTAACAACAC+CGG | - | chr8.4:67335395-67335414 | None:intergenic | 45.0% | |
| AGGTATGGGTACTCAAGAGT+AGG | + | chr8.4:67333859-67333878 | MS.gene79690:intron | 45.0% | |
| ATGCTGTCCTCATCTTCCTT+TGG | + | chr8.4:67334819-67334838 | MS.gene79690:intron | 45.0% | |
| GATCCTGTCTGCTCTTCTTT+AGG | - | chr8.4:67335695-67335714 | None:intergenic | 45.0% | |
| GATGGATATGGCAGGTATTC+GGG | + | chr8.4:67334226-67334245 | MS.gene79690:intron | 45.0% | |
| GCAAATGCGAGGACTTTGTT+TGG | + | chr8.4:67336013-67336032 | MS.gene79690:CDS | 45.0% | |
| TGAGTACCCATACCTTGCAT+CGG | - | chr8.4:67333854-67333873 | None:intergenic | 45.0% | |
| TGTTTACTTTCCAGGGGGAA+AGG | + | chr8.4:67334573-67334592 | MS.gene79690:intron | 45.0% | |
| TTCTAGACAGATCCGATGCA+AGG | + | chr8.4:67333839-67333858 | MS.gene79690:CDS | 45.0% | |
| ! | GGACTTTGTTTGGGTGACTA+AGG | + | chr8.4:67336023-67336042 | MS.gene79690:CDS | 45.0% |
| ! | TCGCTGGATGAAGGTTTTCA+TGG | + | chr8.4:67334281-67334300 | MS.gene79690:intron | 45.0% |
| ! | TTTTGTCGGAAATGCTCCGA+TGG | + | chr8.4:67335652-67335671 | MS.gene79690:CDS | 45.0% |
| !! | GAGGTTTTGATGGATATGGC+AGG | + | chr8.4:67334218-67334237 | MS.gene79690:intron | 45.0% |
| !! | GATGGTGATGGTGGTTTAGA+TGG | + | chr8.4:67334196-67334215 | MS.gene79690:intron | 45.0% |
| !! | GGTGTTGGCTGTATAGTTGA+AGG | + | chr8.4:67334174-67334193 | MS.gene79690:intron | 45.0% |
| !! | TAGTTGAAGGATGGTGATGG+TGG | + | chr8.4:67334187-67334206 | MS.gene79690:intron | 45.0% |
| AGGACATTTGCTCGCTCCAA+AGG | - | chr8.4:67334838-67334857 | None:intergenic | 50.0% | |
| CAGCCTAAAGAAGAGCAGAC+AGG | + | chr8.4:67335689-67335708 | MS.gene79690:CDS | 50.0% | |
| CTGATAATCACCTTTCCCCC+TGG | - | chr8.4:67334586-67334605 | None:intergenic | 50.0% | |
| GACAGATCCGATGCAAGGTA+TGG | + | chr8.4:67333844-67333863 | MS.gene79690:intron | 50.0% | |
| GTGAACACACGCGCATGTAT+TGG | + | chr8.4:67334019-67334038 | MS.gene79690:intron | 50.0% | |
| GTTCGACATTGGCAAATGCG+AGG | + | chr8.4:67336002-67336021 | MS.gene79690:CDS | 50.0% | |
| TATGGCAGGTATTCGGGAAG+TGG | + | chr8.4:67334232-67334251 | MS.gene79690:intron | 50.0% | |
| TTGTCTGCTTCGGTGATTCG+CGG | - | chr8.4:67334627-67334646 | None:intergenic | 50.0% | |
| ! | CGAGAGAGAGTTAGAGCGTT+TGG | - | chr8.4:67334000-67334019 | None:intergenic | 50.0% |
| ! | CTGTGTAGTGTTGCTATCGC+TGG | + | chr8.4:67334265-67334284 | MS.gene79690:intron | 50.0% |
| ! | GTGTTGCTATCGCTGGATGA+AGG | + | chr8.4:67334272-67334291 | MS.gene79690:intron | 50.0% |
| !! | GGTGATGGTGGTTTAGATGG+AGG | + | chr8.4:67334199-67334218 | MS.gene79690:intron | 50.0% |
| CTCCAAGTGGAAAGCCTGTG+TGG | + | chr8.4:67335279-67335298 | MS.gene79690:CDS | 55.0% | |
| GATGCTTATGGGGCTCCAAG+TGG | + | chr8.4:67335266-67335285 | MS.gene79690:CDS | 55.0% | |
| GCAGGTATTCGGGAAGTGGA+CGG | + | chr8.4:67334236-67334255 | MS.gene79690:intron | 55.0% | |
| GCTCGCTCCAAAGGAAGATG+AGG | - | chr8.4:67334829-67334848 | None:intergenic | 55.0% | |
| TATTCGGGAAGTGGACGGTG+AGG | + | chr8.4:67334241-67334260 | MS.gene79690:intron | 55.0% | |
| TGCCACACAGGCTTTCCACT+TGG | - | chr8.4:67335284-67335303 | None:intergenic | 55.0% | |
| GCTTCGGTGATTCGCGGTGC+TGG | - | chr8.4:67334621-67334640 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 67333787 | 67336107 | 67333787 | ID=MS.gene79690 |
| chr8.4 | mRNA | 67333787 | 67336107 | 67333787 | ID=MS.gene79690.t1;Parent=MS.gene79690 |
| chr8.4 | exon | 67333787 | 67333860 | 67333787 | ID=MS.gene79690.t1.exon1;Parent=MS.gene79690.t1 |
| chr8.4 | CDS | 67333787 | 67333860 | 67333787 | ID=cds.MS.gene79690.t1;Parent=MS.gene79690.t1 |
| chr8.4 | exon | 67334587 | 67334661 | 67334587 | ID=MS.gene79690.t1.exon2;Parent=MS.gene79690.t1 |
| chr8.4 | CDS | 67334587 | 67334661 | 67334587 | ID=cds.MS.gene79690.t1;Parent=MS.gene79690.t1 |
| chr8.4 | exon | 67335217 | 67335346 | 67335217 | ID=MS.gene79690.t1.exon3;Parent=MS.gene79690.t1 |
| chr8.4 | CDS | 67335217 | 67335346 | 67335217 | ID=cds.MS.gene79690.t1;Parent=MS.gene79690.t1 |
| chr8.4 | exon | 67335602 | 67335727 | 67335602 | ID=MS.gene79690.t1.exon4;Parent=MS.gene79690.t1 |
| chr8.4 | CDS | 67335602 | 67335727 | 67335602 | ID=cds.MS.gene79690.t1;Parent=MS.gene79690.t1 |
| chr8.4 | exon | 67335964 | 67336107 | 67335964 | ID=MS.gene79690.t1.exon5;Parent=MS.gene79690.t1 |
| chr8.4 | CDS | 67335964 | 67336107 | 67335964 | ID=cds.MS.gene79690.t1;Parent=MS.gene79690.t1 |
| Gene Sequence |
| Protein sequence |
