Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80068.t1 | TKY51141.1 | 78.4 | 208 | 34 | 1 | 1 | 197 | 1 | 208 | 3.90E-85 | 324.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80068.t1 | P32869 | 75.0 | 208 | 40 | 2 | 1 | 197 | 1 | 207 | 3.4e-82 | 305.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80068.t1 | T2DMR3 | 78.8 | 208 | 32 | 2 | 1 | 197 | 1 | 207 | 4.7e-85 | 323.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049320 | MS.gene80068 | 0.806516 | 7.92E-50 | -1.69E-46 |
| MS.gene050581 | MS.gene80068 | 0.824653 | 7.18E-54 | -1.69E-46 |
| MS.gene050767 | MS.gene80068 | 0.824642 | 7.23E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene80068 | 0.821375 | 4.17E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene80068 | 0.803 | 4.29E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene80068 | 0.861478 | 9.98E-64 | -1.69E-46 |
| MS.gene053213 | MS.gene80068 | 0.815388 | 9.49E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene80068 | 0.810263 | 1.26E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene80068 | 0.810951 | 8.93E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene80068 | 0.827714 | 1.34E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene80068 | 0.800412 | 1.46E-48 | -1.69E-46 |
| MS.gene055499 | MS.gene80068 | 0.810135 | 1.34E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene80068 | 0.849961 | 2.31E-60 | -1.69E-46 |
| MS.gene055722 | MS.gene80068 | 0.807567 | 4.75E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene80068 | 0.823055 | 1.70E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene80068 | 0.808528 | 2.96E-50 | -1.69E-46 |
| MS.gene056942 | MS.gene80068 | 0.851101 | 1.11E-60 | -1.69E-46 |
| MS.gene057416 | MS.gene80068 | 0.802814 | 4.69E-49 | -1.69E-46 |
| MS.gene058903 | MS.gene80068 | 0.811656 | 6.28E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene80068 | 0.807328 | 5.33E-50 | -1.69E-46 |
| MS.gene060356 | MS.gene80068 | 0.846063 | 2.75E-59 | -1.69E-46 |
| MS.gene060482 | MS.gene80068 | 0.805242 | 1.47E-49 | -1.69E-46 |
| MS.gene061134 | MS.gene80068 | 0.820994 | 5.11E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene80068 | 0.842569 | 2.39E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80068.t1 | MTR_1g104630 | 79.899 | 199 | 32 | 3 | 1 | 197 | 1 | 193 | 1.65e-109 | 311 |
| MS.gene80068.t1 | MTR_5g006130 | 70.833 | 216 | 37 | 3 | 1 | 197 | 1 | 209 | 1.18e-102 | 295 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80068.t1 | AT1G03130 | 75.145 | 173 | 30 | 2 | 38 | 197 | 32 | 204 | 2.77e-88 | 258 |
| MS.gene80068.t1 | AT4G02770 | 73.864 | 176 | 30 | 2 | 38 | 197 | 33 | 208 | 5.39e-87 | 255 |
Find 74 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTGGGCTTTGCGTAAA+AGG | 0.172350 | 1.1:+74895272 | None:intergenic |
| CGACCCGGGTTCACTTTCTC+TGG | 0.253150 | 1.1:+74895019 | None:intergenic |
| AAGGGGTTGGTCAGAACTTT+AGG | 0.293589 | 1.1:-74894994 | MS.gene80068:CDS |
| ATTTCAAAGATTTGTTCTTT+TGG | 0.302487 | 1.1:+74895220 | None:intergenic |
| CCTTGCTAACTTGAGAAGAT+TGG | 0.306141 | 1.1:+74895162 | None:intergenic |
| GGTCAGAACTTTAGGTCTAT+TGG | 0.344103 | 1.1:-74894986 | MS.gene80068:CDS |
| AGCCTAAGACTGAGAGGGTT+TGG | 0.354319 | 1.1:+74895421 | None:intergenic |
| AGAGATACGGTCATTAGGTT+TGG | 0.376453 | 1.1:+74895483 | None:intergenic |
| CTCTTCACCCCTCCTCTCTC+TGG | 0.385923 | 1.1:-74895508 | MS.gene80068:CDS |
| AAAGAACAATGTTTGGCTCT+TGG | 0.389124 | 1.1:-74895139 | MS.gene80068:CDS |
| GGTACAGAGATACGGTCATT+AGG | 0.394276 | 1.1:+74895478 | None:intergenic |
| AGCAAGGAAAGAACAATGTT+TGG | 0.394375 | 1.1:-74895146 | MS.gene80068:CDS |
| CTTGCTAACTTGAGAAGATT+GGG | 0.409133 | 1.1:+74895163 | None:intergenic |
| TGGGAAACACTCTATAGAAT+TGG | 0.417334 | 1.1:+74895083 | None:intergenic |
| CCACTGAACTTAACCTCTAT+AGG | 0.417689 | 1.1:+74894950 | None:intergenic |
| GAGATACGGTCATTAGGTTT+GGG | 0.426468 | 1.1:+74895484 | None:intergenic |
| TCTGGGTACACACCATCCTT+AGG | 0.434810 | 1.1:+74895037 | None:intergenic |
| TGACCAACCCCTTGGCGACC+CGG | 0.439253 | 1.1:+74895004 | None:intergenic |
| TCTATAGAGTGTTTCCCAAT+GGG | 0.441504 | 1.1:-74895078 | MS.gene80068:CDS |
| AGAGAGAGGAGGGGTGAAGA+GGG | 0.442080 | 1.1:+74895510 | None:intergenic |
| ATCCAAACCCTCTCAGTCTT+AGG | 0.461548 | 1.1:-74895423 | MS.gene80068:CDS |
| AAGTATTGAACTTCCCCATT+GGG | 0.462594 | 1.1:+74895064 | None:intergenic |
| TACATAAAATTCCTCAACTT+GGG | 0.465412 | 1.1:+74895258 | None:intergenic |
| TAAGAATGTTAGTCCTATAG+AGG | 0.473752 | 1.1:-74894963 | MS.gene80068:CDS |
| GTTTGGGACCAGAGAGAGGA+GGG | 0.477785 | 1.1:+74895500 | None:intergenic |
| CAGAGAGAGGAGGGGTGAAG+AGG | 0.479426 | 1.1:+74895509 | None:intergenic |
| CAAATCTTTGAAATGCCTAC+TGG | 0.482126 | 1.1:-74895211 | MS.gene80068:CDS |
| ATGTTTGTGTCTTACTCAGG+TGG | 0.482467 | 1.1:+74895328 | None:intergenic |
| GACCCGGGTTCACTTTCTCT+GGG | 0.486087 | 1.1:+74895020 | None:intergenic |
| GAGAGGAGGGGTGAAGAGGG+AGG | 0.499448 | 1.1:+74895513 | None:intergenic |
| AAAGTGAACCCGGGTCGCCA+AGG | 0.500800 | 1.1:-74895013 | MS.gene80068:CDS |
| TTACATAAAATTCCTCAACT+TGG | 0.508639 | 1.1:+74895257 | None:intergenic |
| TCAGGTGGGGTGAAGCCAAT+TGG | 0.510396 | 1.1:+74895343 | None:intergenic |
| GAAGCAACAGAGGCACCAAT+TGG | 0.510520 | 1.1:-74895358 | MS.gene80068:CDS |
| AACCCGGGTCGCCAAGGGGT+TGG | 0.516971 | 1.1:-74895007 | MS.gene80068:CDS |
| GACCAACCCCTTGGCGACCC+GGG | 0.524362 | 1.1:+74895005 | None:intergenic |
| AATGTGGGTGATTGTTTCCA+TGG | 0.524862 | 1.1:+74895457 | None:intergenic |
| TTCTATAGAGTGTTTCCCAA+TGG | 0.534519 | 1.1:-74895079 | MS.gene80068:CDS |
| CAAGTATTGAACTTCCCCAT+TGG | 0.539423 | 1.1:+74895063 | None:intergenic |
| TGTTTGTGTCTTACTCAGGT+GGG | 0.540009 | 1.1:+74895329 | None:intergenic |
| TGGATTGGTGAAGGACAATG+TGG | 0.545639 | 1.1:+74895441 | None:intergenic |
| TGGCTCTTGGAACTACATTG+AGG | 0.549525 | 1.1:-74895126 | MS.gene80068:CDS |
| AAGTGAACCCGGGTCGCCAA+GGG | 0.549528 | 1.1:-74895012 | MS.gene80068:CDS |
| GTTTCCATGGTACAGAGATA+CGG | 0.551001 | 1.1:+74895470 | None:intergenic |
| GGTTTGGGACCAGAGAGAGG+AGG | 0.559759 | 1.1:+74895499 | None:intergenic |
| ATTGGGACCTTCCCTCATGA+TGG | 0.564788 | 1.1:+74895180 | None:intergenic |
| GTACCCAGAGAAAGTGAACC+CGG | 0.564935 | 1.1:-74895023 | MS.gene80068:CDS |
| GAGAGGGTTTGGATTGGTGA+AGG | 0.565450 | 1.1:+74895432 | None:intergenic |
| CAAAACAACAACTGTTACTG+AGG | 0.567600 | 1.1:-74895380 | MS.gene80068:CDS |
| TAAAGTTCTGACCAACCCCT+TGG | 0.570035 | 1.1:+74894996 | None:intergenic |
| AGTTCAATACTTGCATCCTA+AGG | 0.578655 | 1.1:-74895053 | MS.gene80068:CDS |
| GTTTGTGTCTTACTCAGGTG+GGG | 0.582440 | 1.1:+74895330 | None:intergenic |
| CCAATCTTCTCAAGTTAGCA+AGG | 0.583877 | 1.1:-74895162 | MS.gene80068:CDS |
| CAATACTTGCATCCTAAGGA+TGG | 0.585635 | 1.1:-74895049 | MS.gene80068:CDS |
| AAGACTGAGAGGGTTTGGAT+TGG | 0.585730 | 1.1:+74895426 | None:intergenic |
| CTGGTGGTGCAGCCATCATG+AGG | 0.591206 | 1.1:-74895192 | MS.gene80068:CDS |
| GAGGGAGGTTTGAGTTGCCG+TGG | 0.592804 | 1.1:+74895528 | None:intergenic |
| CCTATAGAGGTTAAGTTCAG+TGG | 0.595489 | 1.1:-74894950 | MS.gene80068:CDS |
| AAACCACCTCACAATGGCCA+CGG | 0.601200 | 1.1:-74895545 | None:intergenic |
| TTAGGTTTGGGACCAGAGAG+AGG | 0.606251 | 1.1:+74895496 | None:intergenic |
| TTTGGGACCAGAGAGAGGAG+GGG | 0.614499 | 1.1:+74895501 | None:intergenic |
| GGTGCAGCCATCATGAGGGA+AGG | 0.635464 | 1.1:-74895187 | MS.gene80068:CDS |
| TTGTGAGCCTAAGACTGAGA+GGG | 0.636675 | 1.1:+74895416 | None:intergenic |
| ATGATGGCTGCACCACCAGT+AGG | 0.647307 | 1.1:+74895196 | None:intergenic |
| TTTACGCAAAGCCCAAGTTG+AGG | 0.649694 | 1.1:-74895269 | MS.gene80068:CDS |
| CTATAGAGTGTTTCCCAATG+GGG | 0.656977 | 1.1:-74895077 | MS.gene80068:CDS |
| AGTGAACCCGGGTCGCCAAG+GGG | 0.658596 | 1.1:-74895011 | MS.gene80068:CDS |
| ATCTTTGAAATGCCTACTGG+TGG | 0.664160 | 1.1:-74895208 | MS.gene80068:CDS |
| TGTTACTGAGGAAGCAACAG+AGG | 0.671184 | 1.1:-74895368 | MS.gene80068:CDS |
| TGGTGGTGCAGCCATCATGA+GGG | 0.675901 | 1.1:-74895191 | MS.gene80068:CDS |
| ATTGTGAGCCTAAGACTGAG+AGG | 0.683773 | 1.1:+74895415 | None:intergenic |
| TACCCAGAGAAAGTGAACCC+GGG | 0.686978 | 1.1:-74895022 | MS.gene80068:CDS |
| ATGACCGTATCTCTGTACCA+TGG | 0.695290 | 1.1:-74895474 | MS.gene80068:CDS |
| GGATTGGTGAAGGACAATGT+GGG | 0.717553 | 1.1:+74895442 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCAAAGATTTGTTCTTT+TGG | + | chr1.1:74895243-74895262 | None:intergenic | 20.0% |
| ! | TACATAAAATTCCTCAACTT+GGG | + | chr1.1:74895205-74895224 | None:intergenic | 25.0% |
| ! | TTACATAAAATTCCTCAACT+TGG | + | chr1.1:74895206-74895225 | None:intergenic | 25.0% |
| !! | AGGAATTTTATGTAATCACA+TGG | - | chr1.1:74895211-74895230 | MS.gene80068:CDS | 25.0% |
| !! | GGAATTTTATGTAATCACAT+GGG | - | chr1.1:74895212-74895231 | MS.gene80068:CDS | 25.0% |
| TAAGAATGTTAGTCCTATAG+AGG | - | chr1.1:74895497-74895516 | MS.gene80068:CDS | 30.0% | |
| AGCAAGGAAAGAACAATGTT+TGG | - | chr1.1:74895314-74895333 | MS.gene80068:intron | 35.0% | |
| AGTTCAATACTTGCATCCTA+AGG | - | chr1.1:74895407-74895426 | MS.gene80068:CDS | 35.0% | |
| CAAAACAACAACTGTTACTG+AGG | - | chr1.1:74895080-74895099 | MS.gene80068:CDS | 35.0% | |
| CTTGCTAACTTGAGAAGATT+GGG | + | chr1.1:74895300-74895319 | None:intergenic | 35.0% | |
| TGGGAAACACTCTATAGAAT+TGG | + | chr1.1:74895380-74895399 | None:intergenic | 35.0% | |
| ! | TCTATAGAGTGTTTCCCAAT+GGG | - | chr1.1:74895382-74895401 | MS.gene80068:CDS | 35.0% |
| ! | TTCTATAGAGTGTTTCCCAA+TGG | - | chr1.1:74895381-74895400 | MS.gene80068:CDS | 35.0% |
| !! | AAAGAACAATGTTTGGCTCT+TGG | - | chr1.1:74895321-74895340 | MS.gene80068:intron | 35.0% |
| !! | AAGTATTGAACTTCCCCATT+GGG | + | chr1.1:74895399-74895418 | None:intergenic | 35.0% |
| !! | CAAATCTTTGAAATGCCTAC+TGG | - | chr1.1:74895249-74895268 | MS.gene80068:CDS | 35.0% |
| AATGTGGGTGATTGTTTCCA+TGG | + | chr1.1:74895006-74895025 | None:intergenic | 40.0% | |
| AGAGATACGGTCATTAGGTT+TGG | + | chr1.1:74894980-74894999 | None:intergenic | 40.0% | |
| AGTACTGCCACTGAAAATTG+GGG | + | chr1.1:74895163-74895182 | None:intergenic | 40.0% | |
| ATGTTTGTGTCTTACTCAGG+TGG | + | chr1.1:74895135-74895154 | None:intergenic | 40.0% | |
| CAATACTTGCATCCTAAGGA+TGG | - | chr1.1:74895411-74895430 | MS.gene80068:CDS | 40.0% | |
| CAGTACTGCCACTGAAAATT+GGG | + | chr1.1:74895164-74895183 | None:intergenic | 40.0% | |
| CCAATCTTCTCAAGTTAGCA+AGG | - | chr1.1:74895298-74895317 | MS.gene80068:intron | 40.0% | |
| CCACTGAACTTAACCTCTAT+AGG | + | chr1.1:74895513-74895532 | None:intergenic | 40.0% | |
| CCTATAGAGGTTAAGTTCAG+TGG | - | chr1.1:74895510-74895529 | MS.gene80068:CDS | 40.0% | |
| CCTTGCTAACTTGAGAAGAT+TGG | + | chr1.1:74895301-74895320 | None:intergenic | 40.0% | |
| GAGATACGGTCATTAGGTTT+GGG | + | chr1.1:74894979-74894998 | None:intergenic | 40.0% | |
| GGAATGTTTGTGTCTTACTC+AGG | + | chr1.1:74895138-74895157 | None:intergenic | 40.0% | |
| GGTCAGAACTTTAGGTCTAT+TGG | - | chr1.1:74895474-74895493 | MS.gene80068:CDS | 40.0% | |
| GTTTCCATGGTACAGAGATA+CGG | + | chr1.1:74894993-74895012 | None:intergenic | 40.0% | |
| TGTTTGTGTCTTACTCAGGT+GGG | + | chr1.1:74895134-74895153 | None:intergenic | 40.0% | |
| ! | CTATAGAGTGTTTCCCAATG+GGG | - | chr1.1:74895383-74895402 | MS.gene80068:CDS | 40.0% |
| !! | ATCTTTGAAATGCCTACTGG+TGG | - | chr1.1:74895252-74895271 | MS.gene80068:CDS | 40.0% |
| !! | CAAGTATTGAACTTCCCCAT+TGG | + | chr1.1:74895400-74895419 | None:intergenic | 40.0% |
| AAGACTGAGAGGGTTTGGAT+TGG | + | chr1.1:74895037-74895056 | None:intergenic | 45.0% | |
| ATCCAAACCCTCTCAGTCTT+AGG | - | chr1.1:74895037-74895056 | MS.gene80068:CDS | 45.0% | |
| ATGACCGTATCTCTGTACCA+TGG | - | chr1.1:74894986-74895005 | MS.gene80068:CDS | 45.0% | |
| ATTGTGAGCCTAAGACTGAG+AGG | + | chr1.1:74895048-74895067 | None:intergenic | 45.0% | |
| CAACTTGGGCTTTGCGTAAA+AGG | + | chr1.1:74895191-74895210 | None:intergenic | 45.0% | |
| CCAGTACTGCCACTGAAAAT+TGG | + | chr1.1:74895165-74895184 | None:intergenic | 45.0% | |
| GGTACAGAGATACGGTCATT+AGG | + | chr1.1:74894985-74895004 | None:intergenic | 45.0% | |
| GTTTGTGTCTTACTCAGGTG+GGG | + | chr1.1:74895133-74895152 | None:intergenic | 45.0% | |
| TGGCTCTTGGAACTACATTG+AGG | - | chr1.1:74895334-74895353 | MS.gene80068:intron | 45.0% | |
| TGTTACTGAGGAAGCAACAG+AGG | - | chr1.1:74895092-74895111 | MS.gene80068:CDS | 45.0% | |
| TTGTGAGCCTAAGACTGAGA+GGG | + | chr1.1:74895047-74895066 | None:intergenic | 45.0% | |
| TTTACGCAAAGCCCAAGTTG+AGG | - | chr1.1:74895191-74895210 | MS.gene80068:CDS | 45.0% | |
| ! | ATTCCCTCCCCAATTTTCAG+TGG | - | chr1.1:74895153-74895172 | MS.gene80068:CDS | 45.0% |
| ! | CCAATTTTCAGTGGCAGTAC+TGG | - | chr1.1:74895162-74895181 | MS.gene80068:CDS | 45.0% |
| ! | GGATTGGTGAAGGACAATGT+GGG | + | chr1.1:74895021-74895040 | None:intergenic | 45.0% |
| ! | TAAAGTTCTGACCAACCCCT+TGG | + | chr1.1:74895467-74895486 | None:intergenic | 45.0% |
| !! | AAGGGGTTGGTCAGAACTTT+AGG | - | chr1.1:74895466-74895485 | MS.gene80068:CDS | 45.0% |
| !! | ATTTTCAGTGGCAGTACTGG+AGG | - | chr1.1:74895165-74895184 | MS.gene80068:CDS | 45.0% |
| !! | TGGATTGGTGAAGGACAATG+TGG | + | chr1.1:74895022-74895041 | None:intergenic | 45.0% |
| ACTGCCACTGAAAATTGGGG+AGG | + | chr1.1:74895160-74895179 | None:intergenic | 50.0% | |
| AGCCTAAGACTGAGAGGGTT+TGG | + | chr1.1:74895042-74895061 | None:intergenic | 50.0% | |
| ATTGGGACCTTCCCTCATGA+TGG | + | chr1.1:74895283-74895302 | None:intergenic | 50.0% | |
| CTGCCACTGAAAATTGGGGA+GGG | + | chr1.1:74895159-74895178 | None:intergenic | 50.0% | |
| GTACCCAGAGAAAGTGAACC+CGG | - | chr1.1:74895437-74895456 | MS.gene80068:CDS | 50.0% | |
| TACCCAGAGAAAGTGAACCC+GGG | - | chr1.1:74895438-74895457 | MS.gene80068:CDS | 50.0% | |
| TCTGGGTACACACCATCCTT+AGG | + | chr1.1:74895426-74895445 | None:intergenic | 50.0% | |
| ! | TTAGGTTTGGGACCAGAGAG+AGG | + | chr1.1:74894967-74894986 | None:intergenic | 50.0% |
| !! | GAAGCAACAGAGGCACCAAT+TGG | - | chr1.1:74895102-74895121 | MS.gene80068:CDS | 50.0% |
| !! | GAGAGGGTTTGGATTGGTGA+AGG | + | chr1.1:74895031-74895050 | None:intergenic | 50.0% |
| AGAGAGAGGAGGGGTGAAGA+GGG | + | chr1.1:74894953-74894972 | None:intergenic | 55.0% | |
| ATGATGGCTGCACCACCAGT+AGG | + | chr1.1:74895267-74895286 | None:intergenic | 55.0% | |
| GACCCGGGTTCACTTTCTCT+GGG | + | chr1.1:74895443-74895462 | None:intergenic | 55.0% | |
| TCAGGTGGGGTGAAGCCAAT+TGG | + | chr1.1:74895120-74895139 | None:intergenic | 55.0% | |
| ! | GTTTGGGACCAGAGAGAGGA+GGG | + | chr1.1:74894963-74894982 | None:intergenic | 55.0% |
| ! | TGGTGGTGCAGCCATCATGA+GGG | - | chr1.1:74895269-74895288 | MS.gene80068:CDS | 55.0% |
| ! | TTTGGGACCAGAGAGAGGAG+GGG | + | chr1.1:74894962-74894981 | None:intergenic | 55.0% |
| AAAGTGAACCCGGGTCGCCA+AGG | - | chr1.1:74895447-74895466 | MS.gene80068:CDS | 60.0% | |
| AAGTGAACCCGGGTCGCCAA+GGG | - | chr1.1:74895448-74895467 | MS.gene80068:CDS | 60.0% | |
| CAGAGAGAGGAGGGGTGAAG+AGG | + | chr1.1:74894954-74894973 | None:intergenic | 60.0% | |
| CGACCCGGGTTCACTTTCTC+TGG | + | chr1.1:74895444-74895463 | None:intergenic | 60.0% | |
| CTCTTCACCCCTCCTCTCTC+TGG | - | chr1.1:74894952-74894971 | MS.gene80068:CDS | 60.0% | |
| GGTGCAGCCATCATGAGGGA+AGG | - | chr1.1:74895273-74895292 | MS.gene80068:CDS | 60.0% | |
| ! | CTGGTGGTGCAGCCATCATG+AGG | - | chr1.1:74895268-74895287 | MS.gene80068:CDS | 60.0% |
| ! | GGTTTGGGACCAGAGAGAGG+AGG | + | chr1.1:74894964-74894983 | None:intergenic | 60.0% |
| !! | GAGGGAGGTTTGAGTTGCCG+TGG | + | chr1.1:74894935-74894954 | None:intergenic | 60.0% |
| AGTGAACCCGGGTCGCCAAG+GGG | - | chr1.1:74895449-74895468 | MS.gene80068:CDS | 65.0% | |
| GAGAGGAGGGGTGAAGAGGG+AGG | + | chr1.1:74894950-74894969 | None:intergenic | 65.0% | |
| TGACCAACCCCTTGGCGACC+CGG | + | chr1.1:74895459-74895478 | None:intergenic | 65.0% | |
| AACCCGGGTCGCCAAGGGGT+TGG | - | chr1.1:74895453-74895472 | MS.gene80068:CDS | 70.0% | |
| GACCAACCCCTTGGCGACCC+GGG | + | chr1.1:74895458-74895477 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 74894928 | 74895554 | 74894928 | ID=MS.gene80068 |
| chr1.1 | mRNA | 74894928 | 74895554 | 74894928 | ID=MS.gene80068.t1;Parent=MS.gene80068 |
| chr1.1 | exon | 74895343 | 74895554 | 74895343 | ID=MS.gene80068.t1.exon1;Parent=MS.gene80068.t1 |
| chr1.1 | CDS | 74895343 | 74895554 | 74895343 | ID=cds.MS.gene80068.t1;Parent=MS.gene80068.t1 |
| chr1.1 | exon | 74894928 | 74895309 | 74894928 | ID=MS.gene80068.t1.exon2;Parent=MS.gene80068.t1 |
| chr1.1 | CDS | 74894928 | 74895309 | 74894928 | ID=cds.MS.gene80068.t1;Parent=MS.gene80068.t1 |
| Gene Sequence |
| Protein sequence |
