Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81421.t1 | XP_003617666.2 | 99.5 | 418 | 2 | 0 | 1 | 418 | 1 | 418 | 1.10E-222 | 782.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81421.t1 | Q42545 | 77.5 | 423 | 85 | 4 | 4 | 418 | 13 | 433 | 1.3e-168 | 594.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81421.t1 | Q5JZT9 | 99.5 | 418 | 2 | 0 | 1 | 418 | 1 | 418 | 7.9e-223 | 782.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene81421 | 0.813095 | 3.04E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene81421 | 0.835824 | 1.34E-56 | -1.69E-46 |
| MS.gene050099 | MS.gene81421 | 0.838896 | 2.19E-57 | -1.69E-46 |
| MS.gene050301 | MS.gene81421 | 0.831503 | 1.61E-55 | -1.69E-46 |
| MS.gene051471 | MS.gene81421 | 0.814312 | 1.64E-51 | -1.69E-46 |
| MS.gene051662 | MS.gene81421 | 0.859216 | 4.82E-63 | -1.69E-46 |
| MS.gene051663 | MS.gene81421 | 0.852394 | 4.75E-61 | -1.69E-46 |
| MS.gene052178 | MS.gene81421 | 0.82326 | 1.52E-53 | -1.69E-46 |
| MS.gene052207 | MS.gene81421 | 0.803947 | 2.73E-49 | -1.69E-46 |
| MS.gene052256 | MS.gene81421 | 0.83321 | 6.08E-56 | -1.69E-46 |
| MS.gene052600 | MS.gene81421 | 0.800353 | 1.50E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene81421 | 0.849263 | 3.62E-60 | -1.69E-46 |
| MS.gene053907 | MS.gene81421 | 0.803965 | 2.71E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene81421 | 0.839048 | 2.00E-57 | -1.69E-46 |
| MS.gene055133 | MS.gene81421 | 0.804114 | 2.52E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene81421 | 0.825038 | 5.83E-54 | -1.69E-46 |
| MS.gene055390 | MS.gene81421 | 0.84158 | 4.36E-58 | -1.69E-46 |
| MS.gene055422 | MS.gene81421 | 0.856865 | 2.41E-62 | -1.69E-46 |
| MS.gene055428 | MS.gene81421 | 0.803671 | 3.12E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene81421 | 0.813434 | 2.57E-51 | -1.69E-46 |
| MS.gene057121 | MS.gene81421 | 0.846539 | 2.04E-59 | -1.69E-46 |
| MS.gene057245 | MS.gene81421 | 0.80341 | 3.53E-49 | -1.69E-46 |
| MS.gene057260 | MS.gene81421 | 0.803026 | 4.24E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene81421 | 0.83976 | 1.31E-57 | -1.69E-46 |
| MS.gene058002 | MS.gene81421 | 0.816712 | 4.80E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene81421 | 0.824621 | 7.31E-54 | -1.69E-46 |
| MS.gene058845 | MS.gene81421 | 0.812151 | 4.90E-51 | -1.69E-46 |
| MS.gene058982 | MS.gene81421 | 0.803025 | 4.24E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene81421 | 0.800576 | 1.35E-48 | -1.69E-46 |
| MS.gene059228 | MS.gene81421 | 0.807594 | 4.68E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene81421 | 0.823654 | 1.23E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene81421 | 0.821192 | 4.60E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene81421 | 0.833247 | 5.95E-56 | -1.69E-46 |
| MS.gene060476 | MS.gene81421 | 0.838316 | 3.09E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene81421 | 0.801735 | 7.83E-49 | -1.69E-46 |
| MS.gene061113 | MS.gene81421 | 0.818896 | 1.54E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81421.t1 | MTR_5g094120 | 99.522 | 418 | 2 | 0 | 1 | 418 | 1 | 418 | 0.0 | 837 |
| MS.gene81421.t1 | MTR_3g055590 | 84.185 | 411 | 62 | 3 | 9 | 418 | 5 | 413 | 0.0 | 615 |
| MS.gene81421.t1 | MTR_1g060010 | 58.446 | 296 | 121 | 1 | 72 | 365 | 135 | 430 | 5.30e-111 | 335 |
| MS.gene81421.t1 | MTR_7g104500 | 58.644 | 295 | 120 | 1 | 73 | 365 | 149 | 443 | 7.98e-111 | 333 |
| MS.gene81421.t1 | MTR_7g104500 | 58.644 | 295 | 120 | 1 | 73 | 365 | 149 | 443 | 2.68e-110 | 333 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81421.t1 | AT5G55280 | 85.445 | 371 | 51 | 2 | 50 | 418 | 64 | 433 | 0.0 | 577 |
| MS.gene81421.t1 | AT3G52750 | 60.000 | 310 | 122 | 1 | 58 | 365 | 113 | 422 | 7.85e-115 | 344 |
| MS.gene81421.t1 | AT3G52750 | 60.000 | 310 | 122 | 1 | 58 | 365 | 113 | 422 | 7.85e-115 | 344 |
| MS.gene81421.t1 | AT3G52750 | 60.000 | 310 | 122 | 1 | 58 | 365 | 113 | 422 | 7.85e-115 | 344 |
| MS.gene81421.t1 | AT2G36250 | 59.032 | 310 | 125 | 1 | 58 | 365 | 36 | 345 | 8.61e-113 | 336 |
| MS.gene81421.t1 | AT2G36250 | 59.032 | 310 | 125 | 1 | 58 | 365 | 117 | 426 | 3.10e-112 | 338 |
| MS.gene81421.t1 | AT2G36250 | 59.032 | 310 | 125 | 1 | 58 | 365 | 117 | 426 | 3.10e-112 | 338 |
| MS.gene81421.t1 | AT2G36250 | 59.032 | 310 | 125 | 1 | 58 | 365 | 117 | 426 | 3.10e-112 | 338 |
| MS.gene81421.t1 | AT3G52750 | 62.009 | 229 | 85 | 1 | 58 | 284 | 113 | 341 | 9.92e-82 | 255 |
Find 107 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTGCCAATATTATATT+TGG | 0.100420 | 5.2:-79345884 | MS.gene81421:CDS |
| ACACCAAATCTGATCCTTTA+AGG | 0.168325 | 5.2:+79348531 | None:intergenic |
| GCTACTTTGGCTCCTTTAAT+TGG | 0.187864 | 5.2:-79346483 | MS.gene81421:CDS |
| GCTGAAAACCCTATTAAAAT+TGG | 0.229125 | 5.2:-79348756 | MS.gene81421:CDS |
| TACTGGCGGGAATCCACTTT+TGG | 0.236726 | 5.2:-79348597 | MS.gene81421:CDS |
| CAACGTTTCACACGTCGTTT+TGG | 0.236894 | 5.2:-79349870 | MS.gene81421:CDS |
| TGAATAGATGATCCAATTAA+AGG | 0.273013 | 5.2:+79346471 | None:intergenic |
| GCTATTGCTGATGCCCTTAA+AGG | 0.286692 | 5.2:-79348545 | MS.gene81421:CDS |
| AAGATTAAGGTCGTTGGAAT+TGG | 0.290511 | 5.2:-79349810 | MS.gene81421:CDS |
| TGTTGATAACGCTAAGATTA+AGG | 0.323415 | 5.2:-79349823 | MS.gene81421:CDS |
| TTCATAACAGCTGGGATGGG+TGG | 0.331608 | 5.2:-79348509 | MS.gene81421:CDS |
| AGATTAAGGTCGTTGGAATT+GGG | 0.354685 | 5.2:-79349809 | MS.gene81421:CDS |
| CATGATTGGTAGTGGTTTGC+AGG | 0.358021 | 5.2:-79349760 | MS.gene81421:intron |
| AACAGCTCCAAATATAATAT+TGG | 0.367048 | 5.2:+79345877 | None:intergenic |
| GGGGTGGTGTATAATATTAC+TGG | 0.374863 | 5.2:-79346438 | MS.gene81421:CDS |
| TTTGATATTTGAGCCACAAC+TGG | 0.375367 | 5.2:+79348464 | None:intergenic |
| GAGCTTCTGACTCGTGGATT+AGG | 0.377707 | 5.2:-79348732 | MS.gene81421:intron |
| GAATGTGAGAGAAGCTTGTT+TGG | 0.378996 | 5.2:+79349954 | None:intergenic |
| TTTACAGGTTGTGACTAGTT+TGG | 0.382264 | 5.2:-79345912 | MS.gene81421:intron |
| AGCAGAAGAAGCAGCAGAAC+AGG | 0.382305 | 5.2:-79346505 | MS.gene81421:CDS |
| ACGTGTGAAACGTTGCGTTT+TGG | 0.386570 | 5.2:+79349878 | None:intergenic |
| TGCCCTTAAAGGATCAGATT+TGG | 0.410169 | 5.2:-79348534 | MS.gene81421:CDS |
| TTACCCTGCAGGAAGTCAAC+AGG | 0.422777 | 5.2:-79346404 | MS.gene81421:CDS |
| ACTACCAATCATGCGGTTAA+CGG | 0.432044 | 5.2:+79349770 | None:intergenic |
| AGCAGCAGAACAGGCTACTT+TGG | 0.434800 | 5.2:-79346496 | MS.gene81421:CDS |
| GATTTGGTGTTCATAACAGC+TGG | 0.436980 | 5.2:-79348518 | MS.gene81421:CDS |
| TGACGAGCAGATGCCACTCC+AGG | 0.440624 | 5.2:-79348168 | MS.gene81421:CDS |
| TCATAACAGCTGGGATGGGT+GGG | 0.443818 | 5.2:-79348508 | MS.gene81421:CDS |
| CATAACAGCTGGGATGGGTG+GGG | 0.445201 | 5.2:-79348507 | MS.gene81421:CDS |
| TCAAGAAGCTTAGCAGCCCT+TGG | 0.447912 | 5.2:+79345767 | None:intergenic |
| TGTGTGTTCTTTCAGATACC+TGG | 0.451298 | 5.2:-79346621 | MS.gene81421:intron |
| AGCCACAACTGGGGCAGCAC+CGG | 0.454881 | 5.2:+79348475 | None:intergenic |
| CTGAAATTCCCTGAACTCCT+TGG | 0.456416 | 5.2:+79348114 | None:intergenic |
| ATGTCAAGAAGACGATCATT+TGG | 0.457004 | 5.2:+79348194 | None:intergenic |
| CTGCGAGACGAAAAGCATCC+TGG | 0.457577 | 5.2:+79348150 | None:intergenic |
| CACCAAATCTGATCCTTTAA+GGG | 0.462114 | 5.2:+79348532 | None:intergenic |
| AATGCCGTTAACCGCATGAT+TGG | 0.465096 | 5.2:-79349774 | MS.gene81421:CDS |
| AGGACGCAAAAGATCCTTGC+AGG | 0.465101 | 5.2:-79348390 | MS.gene81421:intron |
| TTTGAGGACTTGAGGGGAGC+GGG | 0.475415 | 5.2:+79345710 | None:intergenic |
| GGAAGTCAACAGGGTATCTC+AGG | 0.480783 | 5.2:-79346394 | MS.gene81421:intron |
| GTTCTGCTGCTTCTTCTGCT+CGG | 0.482688 | 5.2:+79346508 | None:intergenic |
| AGATAAGTTTGAGGACTTGA+GGG | 0.484578 | 5.2:+79345703 | None:intergenic |
| GCAGCTTGTTCGCCCAAAAG+TGG | 0.485411 | 5.2:+79348584 | None:intergenic |
| AACGCTAAGATTAAGGTCGT+TGG | 0.492712 | 5.2:-79349816 | MS.gene81421:CDS |
| TCATCTATTCAATCAGCCAC+TGG | 0.493122 | 5.2:-79346459 | MS.gene81421:CDS |
| AACTTTGGAAGATAAGTTTG+AGG | 0.493944 | 5.2:+79345694 | None:intergenic |
| GTCCGGTGCTGCCCCAGTTG+TGG | 0.494437 | 5.2:-79348477 | MS.gene81421:CDS |
| GTTAACCGCATGATTGGTAG+TGG | 0.501522 | 5.2:-79349768 | MS.gene81421:CDS |
| GTGTTCATAACAGCTGGGAT+GGG | 0.506181 | 5.2:-79348512 | MS.gene81421:CDS |
| ATACCCTGTTGACTTCCTGC+AGG | 0.506393 | 5.2:+79346400 | None:intergenic |
| CATCTATTCAATCAGCCACT+GGG | 0.515602 | 5.2:-79346458 | MS.gene81421:CDS |
| GCTTCTTGACAAAGTGGCCG+AGG | 0.517881 | 5.2:-79345753 | MS.gene81421:CDS |
| TTGATATTTGAGCCACAACT+GGG | 0.519459 | 5.2:+79348465 | None:intergenic |
| AGACTTCTATGCAATTAATA+CGG | 0.522331 | 5.2:-79348805 | MS.gene81421:CDS |
| AAGATAAGTTTGAGGACTTG+AGG | 0.523933 | 5.2:+79345702 | None:intergenic |
| TTGCGTCCTTCAAAACTGAA+AGG | 0.528521 | 5.2:+79348404 | None:intergenic |
| ATAACAGCTGGGATGGGTGG+GGG | 0.529972 | 5.2:-79348506 | MS.gene81421:CDS |
| GACTCTGGTACTGCAATGCT+CGG | 0.530970 | 5.2:-79346555 | MS.gene81421:CDS |
| AAATCCACATTCACAAGTCC+AGG | 0.531100 | 5.2:+79346603 | None:intergenic |
| GATTAAGGTCGTTGGAATTG+GGG | 0.533391 | 5.2:-79349808 | MS.gene81421:CDS |
| CTCGGAGTAGGTGTTTCCTC+TGG | 0.540323 | 5.2:-79346537 | MS.gene81421:CDS |
| ATTGGAGAGCTTCTGACTCG+TGG | 0.542831 | 5.2:-79348738 | MS.gene81421:CDS |
| ATTAAGGTCGTTGGAATTGG+GGG | 0.543385 | 5.2:-79349807 | MS.gene81421:CDS |
| CACGTGACTATCATCGCCAC+TGG | 0.547688 | 5.2:-79345827 | MS.gene81421:CDS |
| GGTGTTCATAACAGCTGGGA+TGG | 0.553850 | 5.2:-79348513 | MS.gene81421:CDS |
| AGTAGGAACACCTGCCTGCA+AGG | 0.555045 | 5.2:+79348376 | None:intergenic |
| CGGTGCTCTAGATTCAACTT+TGG | 0.558458 | 5.2:+79345679 | None:intergenic |
| AAGTGGATAGTGATGAATTG+TGG | 0.559720 | 5.2:+79349922 | None:intergenic |
| GGTACTGCAATGCTCGGAGT+AGG | 0.561514 | 5.2:-79346549 | MS.gene81421:CDS |
| GTTTGAGGACTTGAGGGGAG+CGG | 0.564246 | 5.2:+79345709 | None:intergenic |
| AGGAAAGGACATTACCCTGC+AGG | 0.569822 | 5.2:-79346415 | MS.gene81421:CDS |
| AGAAGCTGCTAACAGATCCA+AGG | 0.573525 | 5.2:-79345784 | MS.gene81421:CDS |
| GTTGTTGATGATCGTTACAC+CGG | 0.583436 | 5.2:-79345857 | MS.gene81421:CDS |
| ACAAGCTGCGGAGGAATCAA+AGG | 0.584191 | 5.2:-79348570 | MS.gene81421:CDS |
| ATAGTGATGCAGGTACTGGC+GGG | 0.584393 | 5.2:-79348610 | MS.gene81421:intron |
| GTATAATATTACTGGAGGAA+AGG | 0.584416 | 5.2:-79346430 | MS.gene81421:CDS |
| TGTGGCTCAAATATCAAAAG+AGG | 0.584777 | 5.2:-79348459 | MS.gene81421:CDS |
| TAGTGATGAATTGTGGAAGA+GGG | 0.592094 | 5.2:+79349929 | None:intergenic |
| AAGTGAAACTGAATGTGAAG+TGG | 0.592737 | 5.2:+79349905 | None:intergenic |
| ATAGTGATGAATTGTGGAAG+AGG | 0.597745 | 5.2:+79349928 | None:intergenic |
| TTGTTGATGATCGTTACACC+GGG | 0.600097 | 5.2:-79345856 | MS.gene81421:CDS |
| GATACCTGGACTTGTGAATG+TGG | 0.601582 | 5.2:-79346607 | MS.gene81421:CDS |
| GCTCAAATATCAAAAGAGGC+AGG | 0.602252 | 5.2:-79348455 | MS.gene81421:CDS |
| CTTCTTGACAAAGTGGCCGA+GGG | 0.602545 | 5.2:-79345752 | MS.gene81421:CDS |
| GATAGTGATGCAGGTACTGG+CGG | 0.603838 | 5.2:-79348611 | MS.gene81421:intron |
| CCAAATATAATATTGGCAGA+AGG | 0.604139 | 5.2:+79345884 | None:intergenic |
| TGCTAAGCTTCTTGACAAAG+TGG | 0.604517 | 5.2:-79345759 | MS.gene81421:CDS |
| GATAGTCACGTGAATCTCCC+CGG | 0.604903 | 5.2:+79345838 | None:intergenic |
| ATTTGGTGTTCATAACAGCT+GGG | 0.611725 | 5.2:-79348517 | MS.gene81421:CDS |
| TTTGGGCGAACAAGCTGCGG+AGG | 0.616087 | 5.2:-79348579 | MS.gene81421:CDS |
| AAAGCTGTGATGAAAGACTC+TGG | 0.621028 | 5.2:-79346570 | MS.gene81421:CDS |
| TACCCTGTTGACTTCCTGCA+GGG | 0.624886 | 5.2:+79346401 | None:intergenic |
| AGACGAAAAGCATCCTGGAG+TGG | 0.632007 | 5.2:+79348155 | None:intergenic |
| AGGATATGTAACGACGCCCA+CGG | 0.632444 | 5.2:+79348424 | None:intergenic |
| GATAAGTTTGAGGACTTGAG+GGG | 0.636208 | 5.2:+79345704 | None:intergenic |
| TATTCAATCAGCCACTGGGG+TGG | 0.646947 | 5.2:-79346454 | MS.gene81421:CDS |
| TACCCTGCAGGAAGTCAACA+GGG | 0.647460 | 5.2:-79346403 | MS.gene81421:CDS |
| GAGGCAGGTTACTTGACCGT+GGG | 0.648556 | 5.2:-79348440 | MS.gene81421:CDS |
| GTGGTGTATAATATTACTGG+AGG | 0.650305 | 5.2:-79346435 | MS.gene81421:CDS |
| GAAGCTGCTAACAGATCCAA+GGG | 0.650445 | 5.2:-79345783 | MS.gene81421:CDS |
| AGAGGCAGGTTACTTGACCG+TGG | 0.660274 | 5.2:-79348441 | MS.gene81421:CDS |
| AAAAGACTGCGAAAAGCCAG+TGG | 0.669333 | 5.2:+79345811 | None:intergenic |
| GCAAACCACTACCAATCATG+CGG | 0.687686 | 5.2:+79349763 | None:intergenic |
| ATCTATTCAATCAGCCACTG+GGG | 0.689596 | 5.2:-79346457 | MS.gene81421:CDS |
| TGATATTTGAGCCACAACTG+GGG | 0.715087 | 5.2:+79348466 | None:intergenic |
| AATATTATACACCACCCCAG+TGG | 0.754567 | 5.2:+79346443 | None:intergenic |
| TGTTGATGATCGTTACACCG+GGG | 0.787369 | 5.2:-79345855 | MS.gene81421:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTATATATTATTTTAATG+AGG | - | chr5.2:79348936-79348955 | MS.gene81421:intron | 10.0% |
| !! | AACTCTTAATCTAATAAAAT+TGG | - | chr5.2:79347841-79347860 | MS.gene81421:intron | 15.0% |
| !! | AATACTATTGTTCAATAAAA+TGG | - | chr5.2:79347351-79347370 | MS.gene81421:intron | 15.0% |
| !! | GTTAAGATTAAGAATTTAAA+TGG | - | chr5.2:79348349-79348368 | MS.gene81421:intron | 15.0% |
| !!! | ATTCTAAATTAAAAAAGTAC+AGG | + | chr5.2:79348284-79348303 | None:intergenic | 15.0% |
| !!! | TTATTGGTTAAAATTCATAT+CGG | - | chr5.2:79348809-79348828 | MS.gene81421:CDS | 15.0% |
| !! | AAAACTTCTACAATATATCA+CGG | + | chr5.2:79346707-79346726 | None:intergenic | 20.0% |
| !! | ACTTTATGGAAGAAAAATAA+AGG | + | chr5.2:79345925-79345944 | None:intergenic | 20.0% |
| !! | AGGTAAAAATGAAAACTTTA+TGG | + | chr5.2:79345939-79345958 | None:intergenic | 20.0% |
| !! | ATATTACTATTGTTAGATGT+TGG | - | chr5.2:79348236-79348255 | MS.gene81421:CDS | 20.0% |
| !! | ATCAATTTCTCAATAAAACT+AGG | + | chr5.2:79346984-79347003 | None:intergenic | 20.0% |
| !! | CAATTTATAGCATTGTTAAT+GGG | - | chr5.2:79345982-79346001 | MS.gene81421:intron | 20.0% |
| !! | CATTAACAATGCTATAAATT+GGG | + | chr5.2:79345983-79346002 | None:intergenic | 20.0% |
| !! | CTTTATGGAAGAAAAATAAA+GGG | + | chr5.2:79345924-79345943 | None:intergenic | 20.0% |
| !! | TATTACTATTGTTAGATGTT+GGG | - | chr5.2:79348237-79348256 | MS.gene81421:CDS | 20.0% |
| !! | TTTATTGAGAAATTGATTGA+TGG | - | chr5.2:79346987-79347006 | MS.gene81421:intron | 20.0% |
| !!! | ATATGAAAGTTTACTTGTTA+AGG | - | chr5.2:79349275-79349294 | MS.gene81421:intron | 20.0% |
| !!! | ATTCATTTGATATTTTGTTC+AGG | - | chr5.2:79347375-79347394 | MS.gene81421:intron | 20.0% |
| !!! | CATAGTTTTATTCAGAAATT+TGG | - | chr5.2:79346125-79346144 | MS.gene81421:intron | 20.0% |
| !!! | GATTTAGAATTAATGACTTT+AGG | - | chr5.2:79349397-79349416 | MS.gene81421:intron | 20.0% |
| !!! | TATTCTATTCTTCTTTTTCA+TGG | - | chr5.2:79347587-79347606 | MS.gene81421:intron | 20.0% |
| !!! | TTTAGAATGACACTTTATTA+TGG | - | chr5.2:79348296-79348315 | MS.gene81421:intron | 20.0% |
| ! | AACAGCTCCAAATATAATAT+TGG | + | chr5.2:79349771-79349790 | None:intergenic | 25.0% |
| ! | AGACTTCTATGCAATTAATA+CGG | - | chr5.2:79346840-79346859 | MS.gene81421:intron | 25.0% |
| ! | ATAAACTATGTAGCTGTAAA+TGG | - | chr5.2:79346026-79346045 | MS.gene81421:intron | 25.0% |
| ! | ATAACTTTCTTGAAGAGAAA+AGG | - | chr5.2:79349518-79349537 | MS.gene81421:intron | 25.0% |
| ! | ATCAAGCAATTTGAATCAAA+AGG | + | chr5.2:79347017-79347036 | None:intergenic | 25.0% |
| ! | ATCACCTATAGTAAAAAAGA+TGG | - | chr5.2:79346310-79346329 | MS.gene81421:intron | 25.0% |
| ! | ATCCTTACTACAAAATCTAT+AGG | + | chr5.2:79346377-79346396 | None:intergenic | 25.0% |
| ! | ATTTCTCAATAAAACTAGGA+AGG | + | chr5.2:79346980-79346999 | None:intergenic | 25.0% |
| ! | CATAATATTCTACCATAAAC+CGG | + | chr5.2:79346509-79346528 | None:intergenic | 25.0% |
| ! | CCAATTTATAGCATTGTTAA+TGG | - | chr5.2:79345981-79346000 | MS.gene81421:intron | 25.0% |
| ! | CCATTAACAATGCTATAAAT+TGG | + | chr5.2:79345984-79346003 | None:intergenic | 25.0% |
| ! | GACATGTATAATAAAGAGAA+AGG | + | chr5.2:79349692-79349711 | None:intergenic | 25.0% |
| ! | GGAAAAAAATAGATCCTTTA+AGG | + | chr5.2:79349560-79349579 | None:intergenic | 25.0% |
| ! | GTTGATGTATAATGCATTTA+CGG | - | chr5.2:79348371-79348390 | MS.gene81421:intron | 25.0% |
| ! | TAAACTATGTAGCTGTAAAT+GGG | - | chr5.2:79346027-79346046 | MS.gene81421:intron | 25.0% |
| ! | TAACTTTCTTGAAGAGAAAA+GGG | - | chr5.2:79349519-79349538 | MS.gene81421:intron | 25.0% |
| ! | TATATCTATACCATCCTTAA+AGG | - | chr5.2:79349543-79349562 | MS.gene81421:intron | 25.0% |
| ! | TGAATAGATGATCCAATTAA+AGG | + | chr5.2:79349177-79349196 | None:intergenic | 25.0% |
| ! | TTTCTCTTCAAGAAAGTTAT+TGG | + | chr5.2:79349518-79349537 | None:intergenic | 25.0% |
| !! | AAAAATAGATCCTTTAAGGA+TGG | + | chr5.2:79349556-79349575 | None:intergenic | 25.0% |
| !! | AGATTTAGAGTTTAATGAGT+TGG | - | chr5.2:79346475-79346494 | MS.gene81421:CDS | 25.0% |
| !! | TTTTATTCAGAAATTTGGAC+TGG | - | chr5.2:79346130-79346149 | MS.gene81421:intron | 25.0% |
| !!! | AAGTTTTTAAGTAGATCAGT+AGG | - | chr5.2:79348452-79348471 | MS.gene81421:CDS | 25.0% |
| !!! | AATACTAATGTTGGTTTCTT+CGG | - | chr5.2:79346795-79346814 | MS.gene81421:intron | 25.0% |
| !!! | AGAATCTTTTCAAGTCTAAT+GGG | + | chr5.2:79347645-79347664 | None:intergenic | 25.0% |
| !!! | ATTTCTTTGAAGCTTTTCAA+TGG | + | chr5.2:79347410-79347429 | None:intergenic | 25.0% |
| !!! | CAATTTTAACTTTGTTCACA+TGG | + | chr5.2:79346677-79346696 | None:intergenic | 25.0% |
| !!! | CGTAATTTTGATTAGATAGA+AGG | + | chr5.2:79349488-79349507 | None:intergenic | 25.0% |
| !!! | CTCATATGAATTTTAACCAA+TGG | - | chr5.2:79348872-79348891 | MS.gene81421:intron | 25.0% |
| !!! | TTATTTTATTCTCGTGTTGT+TGG | + | chr5.2:79346197-79346216 | None:intergenic | 25.0% |
| AACATTAGTATTCACAAGCA+AGG | + | chr5.2:79346787-79346806 | None:intergenic | 30.0% | |
| AATAAAACTAGGAAGGCTAT+AGG | + | chr5.2:79346973-79346992 | None:intergenic | 30.0% | |
| AATAGTACCACTAGAATGAA+AGG | + | chr5.2:79346607-79346626 | None:intergenic | 30.0% | |
| AATGAACTTACACAACTAGA+GGG | - | chr5.2:79348064-79348083 | MS.gene81421:intron | 30.0% | |
| AATGTTAAATTGTCCCACAT+CGG | + | chr5.2:79348023-79348042 | None:intergenic | 30.0% | |
| ACCTATAGTAAAAAAGATGG+TGG | - | chr5.2:79346313-79346332 | MS.gene81421:intron | 30.0% | |
| ATGTCATGTAGAATAATGCT+AGG | - | chr5.2:79348410-79348429 | MS.gene81421:CDS | 30.0% | |
| ATTTAGACAAAAGGACTACA+CGG | + | chr5.2:79347719-79347738 | None:intergenic | 30.0% | |
| CCAAATATAATATTGGCAGA+AGG | + | chr5.2:79349764-79349783 | None:intergenic | 30.0% | |
| CCTTCTGCCAATATTATATT+TGG | - | chr5.2:79349761-79349780 | MS.gene81421:CDS | 30.0% | |
| CGGTTTATGGTAGAATATTA+TGG | - | chr5.2:79346507-79346526 | MS.gene81421:CDS | 30.0% | |
| CTAATGTTAAATTTCCACAG+AGG | + | chr5.2:79348115-79348134 | None:intergenic | 30.0% | |
| GAAAAAAACAGAGAAAACAG+AGG | - | chr5.2:79348611-79348630 | MS.gene81421:intron | 30.0% | |
| GAAAATAACTCAGTAATGAC+AGG | + | chr5.2:79347320-79347339 | None:intergenic | 30.0% | |
| GAGTTCCACTAAATTTATGT+GGG | + | chr5.2:79348855-79348874 | None:intergenic | 30.0% | |
| GCTGAAAACCCTATTAAAAT+TGG | - | chr5.2:79346889-79346908 | MS.gene81421:intron | 30.0% | |
| GTATAATATTACTGGAGGAA+AGG | - | chr5.2:79349215-79349234 | MS.gene81421:intron | 30.0% | |
| TCACAGAATCAAAGTGTAAA+AGG | + | chr5.2:79349323-79349342 | None:intergenic | 30.0% | |
| TCGGCATATATTTGTAATCA+GGG | - | chr5.2:79346814-79346833 | MS.gene81421:intron | 30.0% | |
| TCTACTTAAAAACTTGAACC+TGG | + | chr5.2:79348447-79348466 | None:intergenic | 30.0% | |
| TGAGTTCCACTAAATTTATG+TGG | + | chr5.2:79348856-79348875 | None:intergenic | 30.0% | |
| TTAACCAATGGAAAAAAGTG+TGG | - | chr5.2:79348884-79348903 | MS.gene81421:intron | 30.0% | |
| TTCGGCATATATTTGTAATC+AGG | - | chr5.2:79346813-79346832 | MS.gene81421:intron | 30.0% | |
| TTGCTTGTGAATACTAATGT+TGG | - | chr5.2:79346786-79346805 | MS.gene81421:intron | 30.0% | |
| TTGTAGTAAGGATAGTAGAT+CGG | - | chr5.2:79346384-79346403 | MS.gene81421:intron | 30.0% | |
| ! | AAATTTGGTAACTAATAGGG+AGG | + | chr5.2:79348000-79348019 | None:intergenic | 30.0% |
| ! | AACCAATAAAAGAGTGTGTT+GGG | + | chr5.2:79348798-79348817 | None:intergenic | 30.0% |
| ! | AACTTTGGAAGATAAGTTTG+AGG | + | chr5.2:79349954-79349973 | None:intergenic | 30.0% |
| ! | CGGAAATTTGGTAACTAATA+GGG | + | chr5.2:79348003-79348022 | None:intergenic | 30.0% |
| ! | TAACCAATAAAAGAGTGTGT+TGG | + | chr5.2:79348799-79348818 | None:intergenic | 30.0% |
| ! | TAAGTTAACTCGTTTTGCAT+AGG | + | chr5.2:79348979-79348998 | None:intergenic | 30.0% |
| ! | TCAATGCGTGTAATTTTTAC+AGG | - | chr5.2:79349718-79349737 | MS.gene81421:intron | 30.0% |
| ! | TCGGAAATTTGGTAACTAAT+AGG | + | chr5.2:79348004-79348023 | None:intergenic | 30.0% |
| ! | TCTAAAATAAGTGAAGGGAA+AGG | + | chr5.2:79345959-79345978 | None:intergenic | 30.0% |
| ! | TTGAGAAATTGATTGATGGT+TGG | - | chr5.2:79346991-79347010 | MS.gene81421:intron | 30.0% |
| ! | TTGATAACCTTTCATTCTAG+TGG | - | chr5.2:79346597-79346616 | MS.gene81421:CDS | 30.0% |
| !! | ACATATCCTTTCAGTTTTGA+AGG | - | chr5.2:79347235-79347254 | MS.gene81421:intron | 30.0% |
| !! | AGAAGCTCTCCAATTTTAAT+AGG | + | chr5.2:79346901-79346920 | None:intergenic | 30.0% |
| !! | GAAGCTCTCCAATTTTAATA+GGG | + | chr5.2:79346900-79346919 | None:intergenic | 30.0% |
| !! | TGGGTTCTAAAATAAGTGAA+GGG | + | chr5.2:79345964-79345983 | None:intergenic | 30.0% |
| !! | TGTTGATAACGCTAAGATTA+AGG | - | chr5.2:79345822-79345841 | MS.gene81421:CDS | 30.0% |
| !! | TTGGGTTCTAAAATAAGTGA+AGG | + | chr5.2:79345965-79345984 | None:intergenic | 30.0% |
| !!! | ACTTTCTCTGTTTTTTTGCT+TGG | + | chr5.2:79348588-79348607 | None:intergenic | 30.0% |
| !!! | GAGAATCTTTTCAAGTCTAA+TGG | + | chr5.2:79347646-79347665 | None:intergenic | 30.0% |
| !!! | TCCACCATCTTTTTTACTAT+AGG | + | chr5.2:79346317-79346336 | None:intergenic | 30.0% |
| AAGAAAAACAGAGCAAACAG+AGG | - | chr5.2:79348640-79348659 | MS.gene81421:intron | 35.0% | |
| AAGATAAGTTTGAGGACTTG+AGG | + | chr5.2:79349946-79349965 | None:intergenic | 35.0% | |
| AAGATTAAGGTCGTTGGAAT+TGG | - | chr5.2:79345835-79345854 | MS.gene81421:CDS | 35.0% | |
| AAGTGAAACTGAATGTGAAG+TGG | + | chr5.2:79345743-79345762 | None:intergenic | 35.0% | |
| AAGTGGATAGTGATGAATTG+TGG | + | chr5.2:79345726-79345745 | None:intergenic | 35.0% | |
| AATTCTCAAACAACGAGAGT+AGG | + | chr5.2:79347289-79347308 | None:intergenic | 35.0% | |
| ACACCAAATCTGATCCTTTA+AGG | + | chr5.2:79347117-79347136 | None:intergenic | 35.0% | |
| ACAGAGCAAATAGTGAAAAC+AGG | - | chr5.2:79348558-79348577 | MS.gene81421:CDS | 35.0% | |
| AGAGCAAATAGTGAAAACAG+GGG | - | chr5.2:79348560-79348579 | MS.gene81421:CDS | 35.0% | |
| AGATAAGTTTGAGGACTTGA+GGG | + | chr5.2:79349945-79349964 | None:intergenic | 35.0% | |
| AGATTAAGGTCGTTGGAATT+GGG | - | chr5.2:79345836-79345855 | MS.gene81421:CDS | 35.0% | |
| AGCTGTAAATGGGATAACTT+TGG | - | chr5.2:79346037-79346056 | MS.gene81421:intron | 35.0% | |
| AGTGAAAACATTTGCAAGCA+AGG | + | chr5.2:79346950-79346969 | None:intergenic | 35.0% | |
| AGTGCAATAGCTTAAACTAG+AGG | - | chr5.2:79348133-79348152 | MS.gene81421:CDS | 35.0% | |
| AGTTACCAAATTTCCGATGT+GGG | - | chr5.2:79348007-79348026 | MS.gene81421:intron | 35.0% | |
| ATAGTGATGAATTGTGGAAG+AGG | + | chr5.2:79345720-79345739 | None:intergenic | 35.0% | |
| ATATATGCTGTGAGACTAGA+TGG | - | chr5.2:79346246-79346265 | MS.gene81421:intron | 35.0% | |
| ATGTCAAGAAGACGATCATT+TGG | + | chr5.2:79347454-79347473 | None:intergenic | 35.0% | |
| CAATGAACTTACACAACTAG+AGG | - | chr5.2:79348063-79348082 | MS.gene81421:intron | 35.0% | |
| CACCAAATCTGATCCTTTAA+GGG | + | chr5.2:79347116-79347135 | None:intergenic | 35.0% | |
| CAGAGCAAATAGTGAAAACA+GGG | - | chr5.2:79348559-79348578 | MS.gene81421:CDS | 35.0% | |
| CGTATGTGTTCATAGGTTAT+GGG | - | chr5.2:79347891-79347910 | MS.gene81421:intron | 35.0% | |
| CTAAAAAAAGAGCTTTCGTG+GGG | + | chr5.2:79349993-79350012 | None:intergenic | 35.0% | |
| CTAGAATCGTATGTGTTCAT+AGG | - | chr5.2:79347884-79347903 | MS.gene81421:intron | 35.0% | |
| CTCTTCAAGAAAGTTATTGG+AGG | + | chr5.2:79349515-79349534 | None:intergenic | 35.0% | |
| GAAATTGCTATGTAAACTCG+AGG | + | chr5.2:79347804-79347823 | None:intergenic | 35.0% | |
| GGTCACATGATTTAGACAAA+AGG | + | chr5.2:79347728-79347747 | None:intergenic | 35.0% | |
| GTAGTCTTTCAAGAGCAAAA+TGG | + | chr5.2:79349630-79349649 | None:intergenic | 35.0% | |
| GTGCAATAGCTTAAACTAGA+GGG | - | chr5.2:79348134-79348153 | MS.gene81421:CDS | 35.0% | |
| GTGGTGTATAATATTACTGG+AGG | - | chr5.2:79349210-79349229 | MS.gene81421:intron | 35.0% | |
| TAAAAAAAGAGCTTTCGTGG+GGG | + | chr5.2:79349992-79350011 | None:intergenic | 35.0% | |
| TAGAATAATGCTAGGAACCA+AGG | - | chr5.2:79348418-79348437 | MS.gene81421:CDS | 35.0% | |
| TAGTGATGAATTGTGGAAGA+GGG | + | chr5.2:79345719-79345738 | None:intergenic | 35.0% | |
| TAGTTACCAAATTTCCGATG+TGG | - | chr5.2:79348006-79348025 | MS.gene81421:intron | 35.0% | |
| TATATGCTGTGAGACTAGAT+GGG | - | chr5.2:79346247-79346266 | MS.gene81421:intron | 35.0% | |
| TCAAGTCCAATTATGAAGAG+TGG | + | chr5.2:79347677-79347696 | None:intergenic | 35.0% | |
| TCATAGGTTATGGGAAACAA+AGG | - | chr5.2:79347900-79347919 | MS.gene81421:intron | 35.0% | |
| TCGTATGTGTTCATAGGTTA+TGG | - | chr5.2:79347890-79347909 | MS.gene81421:intron | 35.0% | |
| TGGACTTGAACTTATGTCAA+GGG | - | chr5.2:79347688-79347707 | MS.gene81421:intron | 35.0% | |
| TGTGGCTCAAATATCAAAAG+AGG | - | chr5.2:79347186-79347205 | MS.gene81421:intron | 35.0% | |
| TTGATATTTGAGCCACAACT+GGG | + | chr5.2:79347183-79347202 | None:intergenic | 35.0% | |
| TTGGACTTGAACTTATGTCA+AGG | - | chr5.2:79347687-79347706 | MS.gene81421:intron | 35.0% | |
| TTTGATATTTGAGCCACAAC+TGG | + | chr5.2:79347184-79347203 | None:intergenic | 35.0% | |
| ! | ATAGTGCACTAATTTTTCCC+TGG | - | chr5.2:79347936-79347955 | MS.gene81421:intron | 35.0% |
| ! | ATCCCAACACACTCTTTTAT+TGG | - | chr5.2:79348793-79348812 | MS.gene81421:CDS | 35.0% |
| ! | GGCCTATAGATTTTGTAGTA+AGG | - | chr5.2:79346372-79346391 | MS.gene81421:intron | 35.0% |
| ! | TAATGAGTTGGATCGAAATC+CGG | - | chr5.2:79346487-79346506 | MS.gene81421:CDS | 35.0% |
| ! | TGTTGACTGTTTCATTCTAG+TGG | - | chr5.2:79346090-79346109 | MS.gene81421:intron | 35.0% |
| ! | TTTACAGGTTGTGACTAGTT+TGG | - | chr5.2:79349733-79349752 | MS.gene81421:intron | 35.0% |
| !! | AAATTGCTTGATAGTGATGC+AGG | - | chr5.2:79347025-79347044 | MS.gene81421:intron | 35.0% |
| !! | ATTTGGTGTTCATAACAGCT+GGG | - | chr5.2:79347128-79347147 | MS.gene81421:intron | 35.0% |
| !! | GTAAAAAAGATGGTGGAAAC+TGG | - | chr5.2:79346320-79346339 | MS.gene81421:intron | 35.0% |
| !! | TTTGGACTGGCTATATTGTA+TGG | - | chr5.2:79346143-79346162 | MS.gene81421:intron | 35.0% |
| !! | TTTTAAGTAGATCAGTAGGC+TGG | - | chr5.2:79348456-79348475 | MS.gene81421:CDS | 35.0% |
| !!! | TTTGGTTTTGTGAGAGAAGA+AGG | + | chr5.2:79345676-79345695 | None:intergenic | 35.0% |
| AAAGCTGTGATGAAAGACTC+TGG | - | chr5.2:79349075-79349094 | MS.gene81421:intron | 40.0% | |
| AAATCCACATTCACAAGTCC+AGG | + | chr5.2:79349045-79349064 | None:intergenic | 40.0% | |
| AAATTTCCACAGAGGAAAGC+TGG | + | chr5.2:79348107-79348126 | None:intergenic | 40.0% | |
| AACGCTAAGATTAAGGTCGT+TGG | - | chr5.2:79345829-79345848 | MS.gene81421:CDS | 40.0% | |
| AAGTCTAATGGGACCAACTA+GGG | + | chr5.2:79347634-79347653 | None:intergenic | 40.0% | |
| AATATTATACACCACCCCAG+TGG | + | chr5.2:79349205-79349224 | None:intergenic | 40.0% | |
| ACTACCAATCATGCGGTTAA+CGG | + | chr5.2:79345878-79345897 | None:intergenic | 40.0% | |
| ACTGGCTATATTGTATGGAG+CGG | - | chr5.2:79346148-79346167 | MS.gene81421:intron | 40.0% | |
| AGTAAGGATAGTAGATCGGA+TGG | - | chr5.2:79346388-79346407 | MS.gene81421:intron | 40.0% | |
| ATCTATTCAATCAGCCACTG+GGG | - | chr5.2:79349188-79349207 | MS.gene81421:intron | 40.0% | |
| ATCTGAAAGAACACACAACC+AGG | + | chr5.2:79349021-79349040 | None:intergenic | 40.0% | |
| ATGAAGCACAAACTCAAGAG+AGG | + | chr5.2:79349581-79349600 | None:intergenic | 40.0% | |
| ATGGAGGATAGTCAATTCAC+TGG | - | chr5.2:79346407-79346426 | MS.gene81421:CDS | 40.0% | |
| ATTAAGGTCGTTGGAATTGG+GGG | - | chr5.2:79345838-79345857 | MS.gene81421:CDS | 40.0% | |
| ATTGTCCCACATCGGAAATT+TGG | + | chr5.2:79348015-79348034 | None:intergenic | 40.0% | |
| CATCTATTCAATCAGCCACT+GGG | - | chr5.2:79349187-79349206 | MS.gene81421:intron | 40.0% | |
| GAGGAGGACTCTGTATAAAA+CGG | + | chr5.2:79347981-79348000 | None:intergenic | 40.0% | |
| GAGTTGCCACTCTTCATAAT+TGG | - | chr5.2:79347668-79347687 | MS.gene81421:intron | 40.0% | |
| GATAAGTTTGAGGACTTGAG+GGG | + | chr5.2:79349944-79349963 | None:intergenic | 40.0% | |
| GATTAAGGTCGTTGGAATTG+GGG | - | chr5.2:79345837-79345856 | MS.gene81421:CDS | 40.0% | |
| GATTCGTAAGTAGGATCAGT+AGG | - | chr5.2:79348510-79348529 | MS.gene81421:CDS | 40.0% | |
| GCATGATTTAAGTCCCTAGT+TGG | - | chr5.2:79347618-79347637 | MS.gene81421:intron | 40.0% | |
| GCTCAAATATCAAAAGAGGC+AGG | - | chr5.2:79347190-79347209 | MS.gene81421:intron | 40.0% | |
| GGGGTGGTGTATAATATTAC+TGG | - | chr5.2:79349207-79349226 | MS.gene81421:intron | 40.0% | |
| GTATTCCTAGCATTGTAGTC+AGG | + | chr5.2:79348759-79348778 | None:intergenic | 40.0% | |
| GTGAAAGATCGTAAACACGA+GGG | - | chr5.2:79348478-79348497 | MS.gene81421:CDS | 40.0% | |
| TCATCTATTCAATCAGCCAC+TGG | - | chr5.2:79349186-79349205 | MS.gene81421:intron | 40.0% | |
| TCGTAACACGATTCGTAAGT+AGG | - | chr5.2:79348501-79348520 | MS.gene81421:CDS | 40.0% | |
| TCTGAAAGAACACACAACCA+GGG | + | chr5.2:79349020-79349039 | None:intergenic | 40.0% | |
| TGATATTTGAGCCACAACTG+GGG | + | chr5.2:79347182-79347201 | None:intergenic | 40.0% | |
| TGCCCTTAAAGGATCAGATT+TGG | - | chr5.2:79347111-79347130 | MS.gene81421:intron | 40.0% | |
| TGCTAAGCTTCTTGACAAAG+TGG | - | chr5.2:79349886-79349905 | MS.gene81421:CDS | 40.0% | |
| TGTGTAAGTTCATTGTGCGA+GGG | + | chr5.2:79348058-79348077 | None:intergenic | 40.0% | |
| TGTGTGTTCTTTCAGATACC+TGG | - | chr5.2:79349024-79349043 | MS.gene81421:intron | 40.0% | |
| TTAACAACCTTGCACACAAC+AGG | + | chr5.2:79347749-79347768 | None:intergenic | 40.0% | |
| TTGCGTCCTTCAAAACTGAA+AGG | + | chr5.2:79347244-79347263 | None:intergenic | 40.0% | |
| TTGGATCGAAATCCGGTTTA+TGG | - | chr5.2:79346494-79346513 | MS.gene81421:CDS | 40.0% | |
| TTGTGTAAGTTCATTGTGCG+AGG | + | chr5.2:79348059-79348078 | None:intergenic | 40.0% | |
| ! | AAGCCTTATCCTACACTAAG+TGG | + | chr5.2:79346558-79346577 | None:intergenic | 40.0% |
| ! | ACCAATGGAAAAAAGTGTGG+TGG | - | chr5.2:79348887-79348906 | MS.gene81421:intron | 40.0% |
| ! | AGCCTTATCCTACACTAAGT+GGG | + | chr5.2:79346557-79346576 | None:intergenic | 40.0% |
| ! | GAATGTGAGAGAAGCTTGTT+TGG | + | chr5.2:79345694-79345713 | None:intergenic | 40.0% |
| ! | GCTACTTTGGCTCCTTTAAT+TGG | - | chr5.2:79349162-79349181 | MS.gene81421:intron | 40.0% |
| ! | TGTCTTGCTTTCTTTTCCCT+CGG | + | chr5.2:79349912-79349931 | None:intergenic | 40.0% |
| ! | TTTGGTAACTAATAGGGAGG+AGG | + | chr5.2:79347997-79348016 | None:intergenic | 40.0% |
| !! | AACGTTTCACACGTCGTTTT+GGG | - | chr5.2:79345776-79345795 | MS.gene81421:CDS | 40.0% |
| !! | GATTTGGTGTTCATAACAGC+TGG | - | chr5.2:79347127-79347146 | MS.gene81421:intron | 40.0% |
| !! | GTTGTTGATGATCGTTACAC+CGG | - | chr5.2:79349788-79349807 | MS.gene81421:CDS | 40.0% |
| !! | TTGTTGATGATCGTTACACC+GGG | - | chr5.2:79349789-79349808 | MS.gene81421:CDS | 40.0% |
| !!! | ACCACCACACTTTTTTCCAT+TGG | + | chr5.2:79348891-79348910 | None:intergenic | 40.0% |
| !!! | CCCACGAAAGCTCTTTTTTT+AGG | - | chr5.2:79349991-79350010 | MS.gene81421:CDS | 40.0% |
| AAAAGACTGCGAAAAGCCAG+TGG | + | chr5.2:79349837-79349856 | None:intergenic | 45.0% | |
| AAACTTGAACCTGGCTACCT+TGG | + | chr5.2:79348438-79348457 | None:intergenic | 45.0% | |
| AAGGATAGTAGATCGGATGG+AGG | - | chr5.2:79346391-79346410 | MS.gene81421:intron | 45.0% | |
| AATGCCGTTAACCGCATGAT+TGG | - | chr5.2:79345871-79345890 | MS.gene81421:CDS | 45.0% | |
| ACATGGTTGCATAGCATTGC+AGG | + | chr5.2:79346660-79346679 | None:intergenic | 45.0% | |
| ACATTTGCAAGCAAGGAGAG+TGG | + | chr5.2:79346943-79346962 | None:intergenic | 45.0% | |
| ACCCCACTTAGTGTAGGATA+AGG | - | chr5.2:79346552-79346571 | MS.gene81421:CDS | 45.0% | |
| ACTAAGTGGGGTCGAATACA+TGG | + | chr5.2:79346544-79346563 | None:intergenic | 45.0% | |
| AGAAGCTGCTAACAGATCCA+AGG | - | chr5.2:79349861-79349880 | MS.gene81421:CDS | 45.0% | |
| AGCGTGAAGTTCATTTGACC+AGG | + | chr5.2:79347957-79347976 | None:intergenic | 45.0% | |
| ATCGGTCCCACCAAATTATG+CGG | - | chr5.2:79348827-79348846 | MS.gene81421:intron | 45.0% | |
| ATCGTGCTTCGACTTTACTC+AGG | + | chr5.2:79348685-79348704 | None:intergenic | 45.0% | |
| CAAGTCTAATGGGACCAACT+AGG | + | chr5.2:79347635-79347654 | None:intergenic | 45.0% | |
| CGGGTCCCACATAAATTTAG+TGG | - | chr5.2:79348847-79348866 | MS.gene81421:intron | 45.0% | |
| CTGAAATTCCCTGAACTCCT+TGG | + | chr5.2:79347534-79347553 | None:intergenic | 45.0% | |
| CTGCATGTTCAAACCACCTA+AGG | + | chr5.2:79346346-79346365 | None:intergenic | 45.0% | |
| CTGGCTATATTGTATGGAGC+GGG | - | chr5.2:79346149-79346168 | MS.gene81421:intron | 45.0% | |
| GAAGCTGCTAACAGATCCAA+GGG | - | chr5.2:79349862-79349881 | MS.gene81421:CDS | 45.0% | |
| GACAACACTAGAGAGAGAGT+TGG | - | chr5.2:79346284-79346303 | MS.gene81421:intron | 45.0% | |
| GAGGATAGTCAATTCACTGG+AGG | - | chr5.2:79346410-79346429 | MS.gene81421:CDS | 45.0% | |
| GATACCTGGACTTGTGAATG+TGG | - | chr5.2:79349038-79349057 | MS.gene81421:intron | 45.0% | |
| GCAAACCACTACCAATCATG+CGG | + | chr5.2:79345885-79345904 | None:intergenic | 45.0% | |
| GCCTTATCCTACACTAAGTG+GGG | + | chr5.2:79346556-79346575 | None:intergenic | 45.0% | |
| GCGTGAAGTTCATTTGACCA+GGG | + | chr5.2:79347956-79347975 | None:intergenic | 45.0% | |
| GCTATTGCTGATGCCCTTAA+AGG | - | chr5.2:79347100-79347119 | MS.gene81421:intron | 45.0% | |
| GGTGAAAGATCGTAAACACG+AGG | - | chr5.2:79348477-79348496 | MS.gene81421:CDS | 45.0% | |
| GGTTTGAACATGCAGAGAGA+AGG | - | chr5.2:79346351-79346370 | MS.gene81421:intron | 45.0% | |
| GTAAAGTCGAAGCACGATTG+AGG | - | chr5.2:79348687-79348706 | MS.gene81421:intron | 45.0% | |
| GTGTAAGTTCATTGTGCGAG+GGG | + | chr5.2:79348057-79348076 | None:intergenic | 45.0% | |
| GTGTTCATAACAGCTGGGAT+GGG | - | chr5.2:79347133-79347152 | MS.gene81421:intron | 45.0% | |
| GTTAACCGCATGATTGGTAG+TGG | - | chr5.2:79345877-79345896 | MS.gene81421:CDS | 45.0% | |
| TATGTGGGACCCGCATAATT+TGG | + | chr5.2:79348840-79348859 | None:intergenic | 45.0% | |
| TATTCGACCCCACTTAGTGT+AGG | - | chr5.2:79346546-79346565 | MS.gene81421:CDS | 45.0% | |
| TCGATCCTGACTACAATGCT+AGG | - | chr5.2:79348751-79348770 | MS.gene81421:CDS | 45.0% | |
| TGGCTATATTGTATGGAGCG+GGG | - | chr5.2:79346150-79346169 | MS.gene81421:intron | 45.0% | |
| ! | ACGTGTGAAACGTTGCGTTT+TGG | + | chr5.2:79345770-79345789 | None:intergenic | 45.0% |
| ! | CAACGTTTCACACGTCGTTT+TGG | - | chr5.2:79345775-79345794 | MS.gene81421:CDS | 45.0% |
| ! | CGGTGCTCTAGATTCAACTT+TGG | + | chr5.2:79349969-79349988 | None:intergenic | 45.0% |
| ! | CGTGTGAAACGTTGCGTTTT+GGG | + | chr5.2:79345769-79345788 | None:intergenic | 45.0% |
| ! | GCAGATGATGTTTTACGCCA+AGG | - | chr5.2:79347514-79347533 | MS.gene81421:intron | 45.0% |
| ! | GTGTGAAACGTTGCGTTTTG+GGG | + | chr5.2:79345768-79345787 | None:intergenic | 45.0% |
| ! | GTTTTACGCCAAGGAGTTCA+GGG | - | chr5.2:79347523-79347542 | MS.gene81421:intron | 45.0% |
| ! | TGTTTTACGCCAAGGAGTTC+AGG | - | chr5.2:79347522-79347541 | MS.gene81421:intron | 45.0% |
| ! | TTCTGCTCGGTTTTTACCAG+AGG | + | chr5.2:79349127-79349146 | None:intergenic | 45.0% |
| !! | ATTGGTAGTGGTTTGCAGGT+GGG | - | chr5.2:79345889-79345908 | MS.gene81421:CDS | 45.0% |
| !! | CATGATTGGTAGTGGTTTGC+AGG | - | chr5.2:79345885-79345904 | MS.gene81421:CDS | 45.0% |
| !! | CTTGATAGTGATGCAGGTAC+TGG | - | chr5.2:79347031-79347050 | MS.gene81421:intron | 45.0% |
| !! | TGTTGATGATCGTTACACCG+GGG | - | chr5.2:79349790-79349809 | MS.gene81421:CDS | 45.0% |
| !!! | AGGATCGAGTGCTGGTTTTT+AGG | + | chr5.2:79348739-79348758 | None:intergenic | 45.0% |
| !!! | TTAGTATTATTTTTAAAAAT+AGG | - | chr5.2:79348204-79348223 | MS.gene81421:CDS | 5.0% |
| AAAAAGAGCTTTCGTGGGGG+CGG | + | chr5.2:79349989-79350008 | None:intergenic | 50.0% | |
| AACCAGGGTTGTCAAACTCG+AGG | + | chr5.2:79349005-79349024 | None:intergenic | 50.0% | |
| ACAAGCTGCGGAGGAATCAA+AGG | - | chr5.2:79347075-79347094 | MS.gene81421:intron | 50.0% | |
| ACCAGGGTTGTCAAACTCGA+GGG | + | chr5.2:79349004-79349023 | None:intergenic | 50.0% | |
| AGCAGAAGAAGCAGCAGAAC+AGG | - | chr5.2:79349140-79349159 | MS.gene81421:intron | 50.0% | |
| AGCAGCAGAACAGGCTACTT+TGG | - | chr5.2:79349149-79349168 | MS.gene81421:intron | 50.0% | |
| AGGAAAGGACATTACCCTGC+AGG | - | chr5.2:79349230-79349249 | MS.gene81421:intron | 50.0% | |
| AGGACGCAAAAGATCCTTGC+AGG | - | chr5.2:79347255-79347274 | MS.gene81421:intron | 50.0% | |
| AGGATATGTAACGACGCCCA+CGG | + | chr5.2:79347224-79347243 | None:intergenic | 50.0% | |
| AGTCAATTCACTGGAGGCAG+AGG | - | chr5.2:79346416-79346435 | MS.gene81421:CDS | 50.0% | |
| CATGTGACCTGTTGTGTGCA+AGG | - | chr5.2:79347739-79347758 | MS.gene81421:intron | 50.0% | |
| CTTCTTGACAAAGTGGCCGA+GGG | - | chr5.2:79349893-79349912 | MS.gene81421:CDS | 50.0% | |
| GACTCTGGTACTGCAATGCT+CGG | - | chr5.2:79349090-79349109 | MS.gene81421:intron | 50.0% | |
| GATAGTCACGTGAATCTCCC+CGG | + | chr5.2:79349810-79349829 | None:intergenic | 50.0% | |
| GCTATTGCGCTCACAATTGC+TGG | - | chr5.2:79346738-79346757 | MS.gene81421:intron | 50.0% | |
| GGTGTTCATAACAGCTGGGA+TGG | - | chr5.2:79347132-79347151 | MS.gene81421:intron | 50.0% | |
| TACCCTGCAGGAAGTCAACA+GGG | - | chr5.2:79349242-79349261 | MS.gene81421:intron | 50.0% | |
| TACTCACCAGCTTTCCTCTG+TGG | - | chr5.2:79348098-79348117 | MS.gene81421:intron | 50.0% | |
| TATTCAATCAGCCACTGGGG+TGG | - | chr5.2:79349191-79349210 | MS.gene81421:intron | 50.0% | |
| TCAAGAAGCTTAGCAGCCCT+TGG | + | chr5.2:79349881-79349900 | None:intergenic | 50.0% | |
| TCATAACAGCTGGGATGGGT+GGG | - | chr5.2:79347137-79347156 | MS.gene81421:intron | 50.0% | |
| TCGGTCCCACCAAATTATGC+GGG | - | chr5.2:79348828-79348847 | MS.gene81421:intron | 50.0% | |
| TGGGACCCGCATAATTTGGT+GGG | + | chr5.2:79348836-79348855 | None:intergenic | 50.0% | |
| TTACCCTGCAGGAAGTCAAC+AGG | - | chr5.2:79349241-79349260 | MS.gene81421:intron | 50.0% | |
| TTCATAACAGCTGGGATGGG+TGG | - | chr5.2:79347136-79347155 | MS.gene81421:intron | 50.0% | |
| TTGTAGTCAGGATCGAGTGC+TGG | + | chr5.2:79348747-79348766 | None:intergenic | 50.0% | |
| ! | ACTTTTGGGCGAACAAGCTG+CGG | - | chr5.2:79347063-79347082 | MS.gene81421:intron | 50.0% |
| ! | ATTGGAGAGCTTCTGACTCG+TGG | - | chr5.2:79346907-79346926 | MS.gene81421:intron | 50.0% |
| ! | GAGCTTCTGACTCGTGGATT+AGG | - | chr5.2:79346913-79346932 | MS.gene81421:intron | 50.0% |
| ! | GGAAGTCAACAGGGTATCTC+AGG | - | chr5.2:79349251-79349270 | MS.gene81421:intron | 50.0% |
| ! | GTTCTGCTGCTTCTTCTGCT+CGG | + | chr5.2:79349140-79349159 | None:intergenic | 50.0% |
| ! | TACTGGCGGGAATCCACTTT+TGG | - | chr5.2:79347048-79347067 | MS.gene81421:intron | 50.0% |
| !! | ACTGGCGGGAATCCACTTTT+GGG | - | chr5.2:79347049-79347068 | MS.gene81421:intron | 50.0% |
| !! | AGACGAAAAGCATCCTGGAG+TGG | + | chr5.2:79347493-79347512 | None:intergenic | 50.0% |
| !! | AGATGGTGGAAACTGGCCTT+AGG | - | chr5.2:79346327-79346346 | MS.gene81421:intron | 50.0% |
| !! | ATACCCTGTTGACTTCCTGC+AGG | + | chr5.2:79349248-79349267 | None:intergenic | 50.0% |
| !! | ATAGTGATGCAGGTACTGGC+GGG | - | chr5.2:79347035-79347054 | MS.gene81421:intron | 50.0% |
| !! | GATAGTGATGCAGGTACTGG+CGG | - | chr5.2:79347034-79347053 | MS.gene81421:intron | 50.0% |
| !! | GATTGGTAGTGGTTTGCAGG+TGG | - | chr5.2:79345888-79345907 | MS.gene81421:CDS | 50.0% |
| !! | TACCCTGTTGACTTCCTGCA+GGG | + | chr5.2:79349247-79349266 | None:intergenic | 50.0% |
| !! | TTGGTAGTGGTTTGCAGGTG+GGG | - | chr5.2:79345890-79345909 | MS.gene81421:CDS | 50.0% |
| AAGCACGATTGAGGTGCGGT+GGG | - | chr5.2:79348696-79348715 | MS.gene81421:intron | 55.0% | |
| AAGGTCGTTGGAATTGGGGG+TGG | - | chr5.2:79345841-79345860 | MS.gene81421:CDS | 55.0% | |
| ACCCTCGAGTTTGACAACCC+TGG | - | chr5.2:79349000-79349019 | MS.gene81421:intron | 55.0% | |
| AGAGGCAGGTTACTTGACCG+TGG | - | chr5.2:79347204-79347223 | MS.gene81421:intron | 55.0% | |
| AGTAGGAACACCTGCCTGCA+AGG | + | chr5.2:79347272-79347291 | None:intergenic | 55.0% | |
| ATAACAGCTGGGATGGGTGG+GGG | - | chr5.2:79347139-79347158 | MS.gene81421:intron | 55.0% | |
| CACGTGACTATCATCGCCAC+TGG | - | chr5.2:79349818-79349837 | MS.gene81421:CDS | 55.0% | |
| CATAACAGCTGGGATGGGTG+GGG | - | chr5.2:79347138-79347157 | MS.gene81421:intron | 55.0% | |
| CGCAAAAGATCCTTGCAGGC+AGG | - | chr5.2:79347259-79347278 | MS.gene81421:intron | 55.0% | |
| CTCGGAGTAGGTGTTTCCTC+TGG | - | chr5.2:79349108-79349127 | MS.gene81421:intron | 55.0% | |
| GAGGCAGGTTACTTGACCGT+GGG | - | chr5.2:79347205-79347224 | MS.gene81421:intron | 55.0% | |
| GCTTCTTGACAAAGTGGCCG+AGG | - | chr5.2:79349892-79349911 | MS.gene81421:CDS | 55.0% | |
| GGTACTGCAATGCTCGGAGT+AGG | - | chr5.2:79349096-79349115 | MS.gene81421:intron | 55.0% | |
| GTCGAAGCACGATTGAGGTG+CGG | - | chr5.2:79348692-79348711 | MS.gene81421:intron | 55.0% | |
| GTGGGACCCGCATAATTTGG+TGG | + | chr5.2:79348837-79348856 | None:intergenic | 55.0% | |
| GTTTGAGGACTTGAGGGGAG+CGG | + | chr5.2:79349939-79349958 | None:intergenic | 55.0% | |
| TGCTAGGAACCAAGGTAGCC+AGG | - | chr5.2:79348426-79348445 | MS.gene81421:CDS | 55.0% | |
| TTTGAGGACTTGAGGGGAGC+GGG | + | chr5.2:79349938-79349957 | None:intergenic | 55.0% | |
| ! | GCAGCTTGTTCGCCCAAAAG+TGG | + | chr5.2:79347064-79347083 | None:intergenic | 55.0% |
| !! | CTGCGAGACGAAAAGCATCC+TGG | + | chr5.2:79347498-79347517 | None:intergenic | 55.0% |
| !! | GGAGCGGGGTATTGATTGAG+CGG | - | chr5.2:79346164-79346183 | MS.gene81421:intron | 55.0% |
| !! | TGGTGGAAACTGGCCTTAGG+TGG | - | chr5.2:79346330-79346349 | MS.gene81421:intron | 55.0% |
| ATTGAGGTGCGGTGGGACGT+AGG | - | chr5.2:79348703-79348722 | MS.gene81421:intron | 60.0% | |
| GAAGCACGATTGAGGTGCGG+TGG | - | chr5.2:79348695-79348714 | MS.gene81421:intron | 60.0% | |
| GTCGTTGGAATTGGGGGTGG+TGG | - | chr5.2:79345844-79345863 | MS.gene81421:CDS | 60.0% | |
| TGACGAGCAGATGCCACTCC+AGG | - | chr5.2:79347477-79347496 | MS.gene81421:intron | 60.0% | |
| TTTGGGCGAACAAGCTGCGG+AGG | - | chr5.2:79347066-79347085 | MS.gene81421:intron | 60.0% | |
| AGCCACAACTGGGGCAGCAC+CGG | + | chr5.2:79347173-79347192 | None:intergenic | 65.0% | |
| ! | ATGGGTGGGGGTACAGGGTC+CGG | - | chr5.2:79347151-79347170 | MS.gene81421:intron | 65.0% |
| ! | CTGGGATGGGTGGGGGTACA+GGG | - | chr5.2:79347146-79347165 | MS.gene81421:intron | 65.0% |
| ! | GCTGGGATGGGTGGGGGTAC+AGG | - | chr5.2:79347145-79347164 | MS.gene81421:intron | 70.0% |
| !! | GTCCGGTGCTGCCCCAGTTG+TGG | - | chr5.2:79347168-79347187 | MS.gene81421:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 79345655 | 79350012 | 79345655 | ID=MS.gene81421 |
| chr5.2 | mRNA | 79345655 | 79350012 | 79345655 | ID=MS.gene81421.t1;Parent=MS.gene81421 |
| chr5.2 | exon | 79349761 | 79350012 | 79349761 | ID=MS.gene81421.t1.exon1;Parent=MS.gene81421.t1 |
| chr5.2 | CDS | 79349761 | 79350012 | 79349761 | ID=cds.MS.gene81421.t1;Parent=MS.gene81421.t1 |
| chr5.2 | exon | 79348733 | 79348832 | 79348733 | ID=MS.gene81421.t1.exon2;Parent=MS.gene81421.t1 |
| chr5.2 | CDS | 79348733 | 79348832 | 79348733 | ID=cds.MS.gene81421.t1;Parent=MS.gene81421.t1 |
| chr5.2 | exon | 79348391 | 79348620 | 79348391 | ID=MS.gene81421.t1.exon3;Parent=MS.gene81421.t1 |
| chr5.2 | CDS | 79348391 | 79348620 | 79348391 | ID=cds.MS.gene81421.t1;Parent=MS.gene81421.t1 |
| chr5.2 | exon | 79348103 | 79348270 | 79348103 | ID=MS.gene81421.t1.exon4;Parent=MS.gene81421.t1 |
| chr5.2 | CDS | 79348103 | 79348270 | 79348103 | ID=cds.MS.gene81421.t1;Parent=MS.gene81421.t1 |
| chr5.2 | exon | 79346395 | 79346628 | 79346395 | ID=MS.gene81421.t1.exon5;Parent=MS.gene81421.t1 |
| chr5.2 | CDS | 79346395 | 79346628 | 79346395 | ID=cds.MS.gene81421.t1;Parent=MS.gene81421.t1 |
| chr5.2 | exon | 79345655 | 79345927 | 79345655 | ID=MS.gene81421.t1.exon6;Parent=MS.gene81421.t1 |
| chr5.2 | CDS | 79345655 | 79345927 | 79345655 | ID=cds.MS.gene81421.t1;Parent=MS.gene81421.t1 |
| Gene Sequence |
| Protein sequence |
