Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94558.t1 | XP_003631113.1 | 93.7 | 302 | 19 | 0 | 11 | 312 | 16 | 317 | 2.60E-160 | 574.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94558.t1 | Q8LB08 | 75.5 | 298 | 73 | 0 | 5 | 302 | 6 | 303 | 3.5e-129 | 462.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94558.t1 | G7LE57 | 93.7 | 302 | 19 | 0 | 11 | 312 | 16 | 317 | 1.9e-160 | 574.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049170 | MS.gene94558 | 0.808598 | 2.86E-50 | -1.69E-46 |
MS.gene049356 | MS.gene94558 | 0.83133 | 1.77E-55 | -1.69E-46 |
MS.gene049369 | MS.gene94558 | 0.803812 | 2.92E-49 | -1.69E-46 |
MS.gene050060 | MS.gene94558 | 0.81022 | 1.28E-50 | -1.69E-46 |
MS.gene050426 | MS.gene94558 | -0.80793 | 3.97E-50 | -1.69E-46 |
MS.gene050670 | MS.gene94558 | 0.817517 | 3.16E-52 | -1.69E-46 |
MS.gene050971 | MS.gene94558 | 0.818084 | 2.36E-52 | -1.69E-46 |
MS.gene05105 | MS.gene94558 | 0.817508 | 3.18E-52 | -1.69E-46 |
MS.gene052188 | MS.gene94558 | 0.83279 | 7.73E-56 | -1.69E-46 |
MS.gene052253 | MS.gene94558 | 0.803143 | 4.01E-49 | -1.69E-46 |
MS.gene052322 | MS.gene94558 | 0.83144 | 1.67E-55 | -1.69E-46 |
MS.gene052340 | MS.gene94558 | 0.804704 | 1.90E-49 | -1.69E-46 |
MS.gene052414 | MS.gene94558 | 0.815399 | 9.43E-52 | -1.69E-46 |
MS.gene052481 | MS.gene94558 | 0.806224 | 9.12E-50 | -1.69E-46 |
MS.gene052484 | MS.gene94558 | 0.800286 | 1.55E-48 | -1.69E-46 |
MS.gene052485 | MS.gene94558 | 0.802035 | 6.79E-49 | -1.69E-46 |
MS.gene053103 | MS.gene94558 | 0.814909 | 1.21E-51 | -1.69E-46 |
MS.gene053209 | MS.gene94558 | 0.829791 | 4.22E-55 | -1.69E-46 |
MS.gene053449 | MS.gene94558 | 0.838881 | 2.21E-57 | -1.69E-46 |
MS.gene053912 | MS.gene94558 | 0.821922 | 3.12E-53 | -1.69E-46 |
MS.gene053916 | MS.gene94558 | 0.806504 | 7.96E-50 | -1.69E-46 |
MS.gene05494 | MS.gene94558 | 0.836689 | 8.08E-57 | -1.69E-46 |
MS.gene055116 | MS.gene94558 | 0.801971 | 7.00E-49 | -1.69E-46 |
MS.gene056511 | MS.gene94558 | 0.808042 | 3.76E-50 | -1.69E-46 |
MS.gene057124 | MS.gene94558 | 0.829378 | 5.32E-55 | -1.69E-46 |
MS.gene057289 | MS.gene94558 | 0.801178 | 1.02E-48 | -1.69E-46 |
MS.gene057823 | MS.gene94558 | 0.812207 | 4.76E-51 | -1.69E-46 |
MS.gene058006 | MS.gene94558 | 0.801404 | 9.15E-49 | -1.69E-46 |
MS.gene058082 | MS.gene94558 | 0.811207 | 7.86E-51 | -1.69E-46 |
MS.gene058928 | MS.gene94558 | 0.836544 | 8.79E-57 | -1.69E-46 |
MS.gene058948 | MS.gene94558 | 0.809653 | 1.70E-50 | -1.69E-46 |
MS.gene059285 | MS.gene94558 | 0.830905 | 2.26E-55 | -1.69E-46 |
MS.gene059366 | MS.gene94558 | 0.825668 | 4.13E-54 | -1.69E-46 |
MS.gene059420 | MS.gene94558 | 0.802615 | 5.16E-49 | -1.69E-46 |
MS.gene059688 | MS.gene94558 | 0.814798 | 1.28E-51 | -1.69E-46 |
MS.gene059692 | MS.gene94558 | 0.804711 | 1.89E-49 | -1.69E-46 |
MS.gene059695 | MS.gene94558 | 0.807238 | 5.57E-50 | -1.69E-46 |
MS.gene059807 | MS.gene94558 | 0.813144 | 2.97E-51 | -1.69E-46 |
MS.gene060403 | MS.gene94558 | 0.82111 | 4.81E-53 | -1.69E-46 |
MS.gene060818 | MS.gene94558 | 0.806838 | 6.77E-50 | -1.69E-46 |
MS.gene060837 | MS.gene94558 | 0.836647 | 8.28E-57 | -1.69E-46 |
MS.gene061154 | MS.gene94558 | 0.817428 | 3.31E-52 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94558.t1 | MTR_8g107270 | 93.709 | 302 | 19 | 0 | 11 | 312 | 16 | 317 | 0.0 | 593 |
MS.gene94558.t1 | MTR_4g078545 | 59.233 | 287 | 117 | 0 | 12 | 298 | 74 | 360 | 2.69e-124 | 360 |
MS.gene94558.t1 | MTR_3g028590 | 58.020 | 293 | 123 | 0 | 4 | 296 | 84 | 376 | 2.30e-123 | 359 |
MS.gene94558.t1 | MTR_3g028590 | 58.020 | 293 | 123 | 0 | 4 | 296 | 88 | 380 | 2.95e-123 | 358 |
MS.gene94558.t1 | MTR_8g036880 | 58.446 | 296 | 122 | 1 | 4 | 298 | 93 | 388 | 9.71e-120 | 350 |
MS.gene94558.t1 | MTR_2g098070 | 58.528 | 299 | 120 | 1 | 2 | 296 | 51 | 349 | 1.95e-117 | 343 |
MS.gene94558.t1 | MTR_3g104500 | 36.054 | 294 | 181 | 5 | 8 | 297 | 29 | 319 | 2.85e-60 | 195 |
MS.gene94558.t1 | MTR_8g027975 | 29.392 | 296 | 174 | 9 | 8 | 278 | 46 | 331 | 2.83e-31 | 120 |
MS.gene94558.t1 | MTR_3g104600 | 31.935 | 310 | 162 | 13 | 2 | 280 | 18 | 309 | 1.62e-30 | 118 |
MS.gene94558.t1 | MTR_5g009500 | 29.043 | 303 | 164 | 10 | 8 | 278 | 33 | 316 | 1.82e-30 | 118 |
MS.gene94558.t1 | MTR_5g009500 | 25.616 | 203 | 134 | 4 | 16 | 207 | 144 | 340 | 1.70e-11 | 64.7 |
MS.gene94558.t1 | MTR_6g091800 | 27.129 | 317 | 191 | 11 | 9 | 303 | 15 | 313 | 9.13e-28 | 110 |
MS.gene94558.t1 | MTR_4g016730 | 28.214 | 280 | 171 | 8 | 24 | 298 | 100 | 354 | 4.66e-27 | 109 |
MS.gene94558.t1 | MTR_8g096050 | 27.562 | 283 | 185 | 6 | 10 | 288 | 224 | 490 | 1.02e-26 | 110 |
MS.gene94558.t1 | MTR_7g064980 | 28.065 | 310 | 192 | 10 | 12 | 304 | 24 | 319 | 2.32e-26 | 106 |
MS.gene94558.t1 | MTR_7g068340 | 27.798 | 277 | 179 | 8 | 24 | 298 | 98 | 355 | 4.60e-26 | 106 |
MS.gene94558.t1 | MTR_6g091800 | 28.854 | 253 | 147 | 7 | 9 | 246 | 15 | 249 | 6.31e-25 | 101 |
MS.gene94558.t1 | MTR_6g091800 | 26.686 | 341 | 186 | 12 | 9 | 303 | 15 | 337 | 6.72e-25 | 102 |
MS.gene94558.t1 | MTR_6g091800 | 26.909 | 275 | 166 | 9 | 9 | 266 | 15 | 271 | 1.28e-24 | 100 |
MS.gene94558.t1 | MTR_6g091800 | 27.244 | 312 | 167 | 10 | 9 | 278 | 15 | 308 | 2.76e-24 | 100 |
MS.gene94558.t1 | MTR_3g107510 | 28.214 | 280 | 171 | 10 | 16 | 288 | 125 | 381 | 3.90e-24 | 101 |
MS.gene94558.t1 | MTR_3g107510 | 27.670 | 206 | 120 | 6 | 8 | 206 | 211 | 394 | 2.28e-15 | 76.6 |
MS.gene94558.t1 | MTR_1g012030 | 27.027 | 296 | 185 | 10 | 11 | 298 | 137 | 409 | 6.21e-24 | 101 |
MS.gene94558.t1 | MTR_1g012030 | 28.079 | 203 | 123 | 6 | 8 | 206 | 228 | 411 | 1.24e-15 | 77.4 |
MS.gene94558.t1 | MTR_3g098460 | 26.148 | 283 | 189 | 6 | 10 | 288 | 202 | 468 | 7.46e-24 | 101 |
MS.gene94558.t1 | MTR_7g084400 | 27.046 | 281 | 180 | 7 | 13 | 288 | 213 | 473 | 1.95e-23 | 100 |
MS.gene94558.t1 | MTR_7g084400 | 24.737 | 190 | 127 | 4 | 13 | 202 | 309 | 482 | 2.17e-11 | 64.7 |
MS.gene94558.t1 | MTR_6g091800 | 28.102 | 274 | 146 | 7 | 9 | 246 | 15 | 273 | 7.00e-22 | 93.6 |
MS.gene94558.t1 | MTR_8g090210 | 28.387 | 310 | 164 | 10 | 8 | 288 | 105 | 385 | 1.58e-21 | 94.4 |
MS.gene94558.t1 | MTR_6g091800 | 26.087 | 299 | 162 | 9 | 9 | 266 | 15 | 295 | 1.76e-21 | 92.8 |
MS.gene94558.t1 | MTR_3g074490 | 27.393 | 303 | 172 | 9 | 10 | 288 | 113 | 391 | 8.84e-21 | 92.0 |
MS.gene94558.t1 | MTR_2g436930 | 23.148 | 324 | 211 | 8 | 2 | 293 | 1 | 318 | 2.95e-20 | 89.7 |
MS.gene94558.t1 | MTR_4g114320 | 25.170 | 294 | 193 | 10 | 11 | 298 | 121 | 393 | 5.55e-20 | 89.7 |
MS.gene94558.t1 | MTR_5g081150 | 25.614 | 285 | 196 | 6 | 12 | 288 | 33 | 309 | 9.55e-19 | 85.5 |
MS.gene94558.t1 | MTR_6g091800 | 30.220 | 182 | 103 | 6 | 9 | 179 | 15 | 183 | 4.09e-18 | 81.3 |
MS.gene94558.t1 | MTR_4g119770 | 22.393 | 326 | 213 | 7 | 5 | 296 | 3 | 322 | 6.11e-18 | 83.2 |
MS.gene94558.t1 | MTR_6g092210 | 25.000 | 260 | 176 | 7 | 56 | 303 | 1 | 253 | 8.25e-17 | 79.0 |
MS.gene94558.t1 | MTR_6g034145 | 24.535 | 269 | 172 | 8 | 56 | 303 | 1 | 259 | 1.94e-16 | 78.2 |
MS.gene94558.t1 | MTR_7g084400 | 29.688 | 192 | 117 | 5 | 13 | 202 | 207 | 382 | 1.20e-15 | 77.4 |
MS.gene94558.t1 | MTR_7g109135 | 23.469 | 294 | 209 | 10 | 16 | 302 | 25 | 309 | 1.24e-15 | 76.6 |
MS.gene94558.t1 | MTR_4g119770 | 23.462 | 260 | 170 | 5 | 5 | 241 | 3 | 256 | 2.64e-15 | 74.7 |
MS.gene94558.t1 | MTR_6g091800 | 29.126 | 206 | 98 | 7 | 9 | 179 | 15 | 207 | 6.84e-15 | 72.8 |
MS.gene94558.t1 | MTR_4g005330 | 21.333 | 300 | 192 | 5 | 11 | 288 | 64 | 341 | 2.47e-13 | 70.1 |
MS.gene94558.t1 | MTR_6g091910 | 25.373 | 201 | 133 | 4 | 9 | 202 | 15 | 205 | 5.16e-13 | 67.4 |
MS.gene94558.t1 | MTR_5g081150 | 26.667 | 195 | 131 | 3 | 12 | 202 | 33 | 219 | 6.89e-13 | 67.8 |
MS.gene94558.t1 | MTR_4g057850 | 23.051 | 295 | 196 | 11 | 14 | 295 | 23 | 299 | 6.91e-13 | 68.6 |
MS.gene94558.t1 | MTR_5g081150 | 26.667 | 195 | 131 | 3 | 12 | 202 | 33 | 219 | 7.70e-13 | 67.4 |
MS.gene94558.t1 | MTR_7g109135 | 22.973 | 296 | 201 | 10 | 16 | 302 | 25 | 302 | 2.87e-12 | 66.6 |
MS.gene94558.t1 | MTR_4g005330 | 21.356 | 295 | 188 | 5 | 16 | 288 | 3 | 275 | 3.45e-12 | 66.2 |
MS.gene94558.t1 | MTR_5g032420 | 21.843 | 293 | 197 | 6 | 11 | 274 | 4 | 293 | 1.56e-11 | 64.7 |
MS.gene94558.t1 | MTR_5g030530 | 24.211 | 285 | 187 | 8 | 10 | 279 | 5 | 275 | 2.55e-11 | 63.5 |
MS.gene94558.t1 | MTR_1g097890 | 22.295 | 305 | 188 | 9 | 14 | 310 | 52 | 315 | 3.90e-11 | 63.2 |
MS.gene94558.t1 | MTR_7g066690 | 20.803 | 274 | 206 | 6 | 8 | 278 | 12 | 277 | 6.84e-11 | 62.4 |
MS.gene94558.t1 | MTR_3g462140 | 21.575 | 292 | 183 | 6 | 8 | 278 | 10 | 276 | 8.20e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94558.t1 | AT5G17400 | 75.503 | 298 | 73 | 0 | 5 | 302 | 6 | 303 | 2.73e-164 | 459 |
MS.gene94558.t1 | AT4G28390 | 60.345 | 290 | 115 | 0 | 9 | 298 | 79 | 368 | 3.52e-124 | 360 |
MS.gene94558.t1 | AT4G28390 | 60.345 | 290 | 115 | 0 | 9 | 298 | 79 | 368 | 3.52e-124 | 360 |
MS.gene94558.t1 | AT5G13490 | 58.219 | 292 | 121 | 1 | 8 | 298 | 83 | 374 | 4.06e-119 | 348 |
MS.gene94558.t1 | AT5G13490 | 58.219 | 292 | 121 | 1 | 8 | 298 | 83 | 374 | 4.06e-119 | 348 |
MS.gene94558.t1 | AT3G08580 | 57.192 | 292 | 124 | 1 | 8 | 298 | 79 | 370 | 1.19e-116 | 342 |
MS.gene94558.t1 | AT3G08580 | 57.192 | 292 | 124 | 1 | 8 | 298 | 79 | 370 | 1.19e-116 | 342 |
MS.gene94558.t1 | AT5G56450 | 37.667 | 300 | 170 | 8 | 9 | 297 | 30 | 323 | 1.33e-58 | 191 |
MS.gene94558.t1 | AT2G37890 | 29.966 | 297 | 191 | 7 | 11 | 298 | 43 | 331 | 3.20e-33 | 125 |
MS.gene94558.t1 | AT4G26180 | 31.469 | 286 | 169 | 9 | 9 | 280 | 17 | 289 | 3.56e-33 | 124 |
MS.gene94558.t1 | AT4G26180 | 31.469 | 286 | 169 | 9 | 9 | 280 | 17 | 289 | 8.04e-33 | 124 |
MS.gene94558.t1 | AT4G01100 | 29.412 | 306 | 163 | 8 | 7 | 278 | 36 | 322 | 7.80e-31 | 119 |
MS.gene94558.t1 | AT1G14560 | 33.213 | 277 | 147 | 12 | 24 | 278 | 38 | 298 | 2.74e-29 | 114 |
MS.gene94558.t1 | AT1G14560 | 32.609 | 276 | 150 | 11 | 24 | 278 | 38 | 298 | 4.57e-29 | 114 |
MS.gene94558.t1 | AT5G01500 | 28.881 | 277 | 176 | 9 | 24 | 298 | 130 | 387 | 6.34e-29 | 115 |
MS.gene94558.t1 | AT3G51870 | 27.536 | 276 | 181 | 7 | 24 | 298 | 102 | 359 | 8.60e-29 | 114 |
MS.gene94558.t1 | AT4G01100 | 30.063 | 316 | 162 | 10 | 7 | 278 | 36 | 336 | 1.57e-28 | 113 |
MS.gene94558.t1 | AT4G01100 | 29.210 | 291 | 153 | 8 | 22 | 278 | 1 | 272 | 3.98e-28 | 110 |
MS.gene94558.t1 | AT3G55640 | 28.094 | 299 | 188 | 10 | 3 | 288 | 29 | 313 | 4.47e-28 | 111 |
MS.gene94558.t1 | AT3G55640 | 28.094 | 299 | 188 | 10 | 3 | 288 | 29 | 313 | 4.47e-28 | 111 |
MS.gene94558.t1 | AT3G53940 | 27.687 | 307 | 197 | 8 | 11 | 304 | 71 | 365 | 8.34e-28 | 111 |
MS.gene94558.t1 | AT3G53940 | 25.366 | 205 | 135 | 4 | 8 | 209 | 175 | 364 | 5.69e-11 | 63.2 |
MS.gene94558.t1 | AT3G21390 | 25.714 | 315 | 193 | 7 | 12 | 293 | 18 | 324 | 6.03e-24 | 100 |
MS.gene94558.t1 | AT3G21390 | 25.714 | 315 | 193 | 7 | 12 | 293 | 40 | 346 | 9.89e-24 | 100 |
MS.gene94558.t1 | AT5G61810 | 28.571 | 273 | 167 | 7 | 10 | 278 | 62 | 310 | 1.25e-23 | 99.4 |
MS.gene94558.t1 | AT5G61810 | 27.915 | 283 | 176 | 7 | 10 | 288 | 205 | 463 | 2.54e-23 | 100 |
MS.gene94558.t1 | AT3G55640 | 30.144 | 209 | 123 | 7 | 3 | 202 | 29 | 223 | 5.33e-23 | 96.3 |
MS.gene94558.t1 | AT3G55640 | 30.144 | 209 | 123 | 7 | 3 | 202 | 29 | 223 | 5.33e-23 | 96.3 |
MS.gene94558.t1 | AT5G51050 | 26.071 | 280 | 184 | 5 | 13 | 288 | 223 | 483 | 7.24e-23 | 99.0 |
MS.gene94558.t1 | AT5G07320 | 26.740 | 273 | 168 | 8 | 22 | 288 | 218 | 464 | 8.03e-23 | 98.6 |
MS.gene94558.t1 | AT5G64970 | 28.146 | 302 | 171 | 10 | 10 | 288 | 132 | 410 | 9.58e-21 | 92.4 |
MS.gene94558.t1 | AT5G64970 | 28.571 | 294 | 164 | 10 | 10 | 280 | 132 | 402 | 2.18e-20 | 91.3 |
MS.gene94558.t1 | AT5G48970 | 24.854 | 342 | 202 | 12 | 2 | 299 | 8 | 338 | 4.90e-20 | 89.4 |
MS.gene94558.t1 | AT4G32400 | 26.298 | 289 | 175 | 11 | 11 | 288 | 112 | 373 | 3.32e-19 | 87.8 |
MS.gene94558.t1 | AT3G53940 | 28.500 | 200 | 123 | 4 | 11 | 202 | 71 | 258 | 3.33e-19 | 86.3 |
MS.gene94558.t1 | AT3G20240 | 22.330 | 309 | 180 | 7 | 10 | 288 | 49 | 327 | 3.53e-19 | 87.0 |
MS.gene94558.t1 | AT5G64970 | 28.053 | 303 | 171 | 11 | 10 | 288 | 7 | 286 | 3.66e-19 | 86.3 |
MS.gene94558.t1 | AT1G78180 | 28.620 | 297 | 164 | 11 | 16 | 288 | 131 | 403 | 2.42e-16 | 79.3 |
MS.gene94558.t1 | AT1G14560 | 31.868 | 182 | 103 | 6 | 117 | 280 | 24 | 202 | 9.48e-16 | 75.5 |
MS.gene94558.t1 | AT3G54110 | 24.643 | 280 | 188 | 9 | 8 | 278 | 10 | 275 | 9.58e-15 | 73.9 |
MS.gene94558.t1 | AT5G48970 | 24.908 | 273 | 160 | 9 | 61 | 299 | 6 | 267 | 3.33e-14 | 72.0 |
MS.gene94558.t1 | AT5G58970 | 22.517 | 302 | 224 | 7 | 8 | 306 | 11 | 305 | 1.43e-13 | 70.5 |
MS.gene94558.t1 | AT5G66380 | 27.368 | 190 | 132 | 4 | 113 | 298 | 5 | 192 | 9.27e-13 | 68.2 |
MS.gene94558.t1 | AT5G01340 | 26.738 | 187 | 124 | 3 | 17 | 199 | 116 | 293 | 5.68e-12 | 65.9 |
MS.gene94558.t1 | AT1G79900 | 26.106 | 226 | 141 | 6 | 58 | 275 | 51 | 258 | 1.39e-11 | 64.7 |
MS.gene94558.t1 | AT1G34065 | 22.295 | 305 | 185 | 9 | 11 | 304 | 73 | 336 | 9.21e-11 | 62.4 |
Find 78 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCGGGAGCTGGGGTGCTTGC+TGG | 0.170497 | 4.1:+301893 | MS.gene94558:CDS |
AAGAGGGCCTCCTTGCCTTT+TGG | 0.226070 | 4.1:+300394 | MS.gene94558:CDS |
TTGCATTATAATACTTATTC+TGG | 0.231839 | 4.1:-301787 | None:intergenic |
GGGATTCGGTGTTTCAATAT+TGG | 0.231853 | 4.1:+301181 | MS.gene94558:CDS |
GGTTACTTCAAAAGCATCTT+TGG | 0.242168 | 4.1:+300930 | MS.gene94558:CDS |
CTTCTAGGGATGGCGGGAGC+TGG | 0.249873 | 4.1:+301881 | MS.gene94558:CDS |
AATTGGTGCCACTGCAGTTT+TGG | 0.258307 | 4.1:-300265 | None:intergenic |
ACTGGTCAGCGTCAGTTTAA+AGG | 0.284312 | 4.1:+301101 | MS.gene94558:CDS |
TTCTTTGCTAGTTTCTTGTT+AGG | 0.299649 | 4.1:+301683 | MS.gene94558:CDS |
TTCTAGGGATGGCGGGAGCT+GGG | 0.318989 | 4.1:+301882 | MS.gene94558:CDS |
GGATTCGGTGTTTCAATATT+GGG | 0.326349 | 4.1:+301182 | MS.gene94558:CDS |
GTCACTGCAAACATGCTTCT+AGG | 0.326966 | 4.1:+301866 | MS.gene94558:CDS |
TTGCTAGTTTCTTGTTAGGT+TGG | 0.348330 | 4.1:+301687 | MS.gene94558:CDS |
AACTAAAACAATAGGCTTCA+TGG | 0.352724 | 4.1:-301246 | None:intergenic |
GGGTACATCAAGTGGTTTGC+TGG | 0.371317 | 4.1:+300972 | MS.gene94558:CDS |
AAAAGCTTCACTCTTTCAAT+TGG | 0.371863 | 4.1:-300282 | None:intergenic |
TCATTTATTTCATGACTCTC+TGG | 0.377926 | 4.1:-301970 | None:intergenic |
TGGAGCATCACAACTGTATC+TGG | 0.393342 | 4.1:+301707 | MS.gene94558:CDS |
CGGGAGCTGGGGTGCTTGCT+GGG | 0.401594 | 4.1:+301894 | MS.gene94558:CDS |
AAAGGTCCAACTAAAACAAT+AGG | 0.409592 | 4.1:-301254 | None:intergenic |
GGACTTTGCACGTACAAGAT+TGG | 0.415555 | 4.1:+301052 | MS.gene94558:CDS |
TTTGCTGGGAATGTGGCTTC+AGG | 0.417717 | 4.1:+300987 | MS.gene94558:CDS |
ATGGTGTTGCTGGCTTGTAC+AGG | 0.427812 | 4.1:+301159 | MS.gene94558:CDS |
ATATCAAGTGATGGTGTTGC+TGG | 0.431324 | 4.1:+301149 | MS.gene94558:CDS |
TGTATCGAGGAATGTACTTT+GGG | 0.438762 | 4.1:+301213 | MS.gene94558:CDS |
GATGTACCCATCTTTCTCTC+TGG | 0.444325 | 4.1:-300958 | None:intergenic |
GTATAAATGCTTACCTCAAA+AGG | 0.445098 | 4.1:-301272 | None:intergenic |
GCTGGCTTGTACAGGGGATT+CGG | 0.454958 | 4.1:+301167 | MS.gene94558:CDS |
CATGCATTCCGTGAGATTGT+TGG | 0.459314 | 4.1:+301812 | MS.gene94558:CDS |
GTGGCTTCAGGCAGTGCTGC+GGG | 0.459875 | 4.1:+300999 | MS.gene94558:CDS |
GCTGACCAGTGGCATGGCAC+TGG | 0.477809 | 4.1:-301088 | None:intergenic |
CGTGAGATTGTTGGACAAGA+GGG | 0.488183 | 4.1:+301821 | MS.gene94558:CDS |
ATGTATCGAGGAATGTACTT+TGG | 0.489826 | 4.1:+301212 | MS.gene94558:CDS |
ATAATACTTATTCTGGTGCC+CGG | 0.509415 | 4.1:-301780 | None:intergenic |
TACTGTGTCTAGATGAGATA+CGG | 0.509802 | 4.1:-301931 | None:intergenic |
TAAAAGAGTCTTTGCTGAAG+AGG | 0.515498 | 4.1:+300377 | MS.gene94558:CDS |
TCTAGGGATGGCGGGAGCTG+GGG | 0.518411 | 4.1:+301883 | MS.gene94558:CDS |
CGACGGCGTAATGTGTCAAA+AGG | 0.519765 | 4.1:-301743 | None:intergenic |
AAAAGAGTCTTTGCTGAAGA+GGG | 0.521037 | 4.1:+300378 | MS.gene94558:CDS |
GGATATTCCAGAGAGAAAGA+TGG | 0.522046 | 4.1:+300951 | MS.gene94558:CDS |
GGTGTTGCTGGCTTGTACAG+GGG | 0.525521 | 4.1:+301161 | MS.gene94558:CDS |
AATATCTAATAACATTGGCC+TGG | 0.525661 | 4.1:-300425 | None:intergenic |
TGGTGTTGCTGGCTTGTACA+GGG | 0.527675 | 4.1:+301160 | MS.gene94558:CDS |
GGTTTCTTAGCTCTATTTCG+AGG | 0.528923 | 4.1:+301842 | MS.gene94558:CDS |
CAAAGCGAAATGATTAAAAG+AGG | 0.529225 | 4.1:+300315 | MS.gene94558:CDS |
CGTCGTATGATGCTAACCTC+CGG | 0.530080 | 4.1:+301761 | MS.gene94558:CDS |
TCACTGCAAACATGCTTCTA+GGG | 0.533524 | 4.1:+301867 | MS.gene94558:CDS |
GGCCTGGTGACCTCTCCAAA+AGG | 0.537477 | 4.1:-300409 | None:intergenic |
TCAGTCCAGTGCCATGCCAC+TGG | 0.539129 | 4.1:+301083 | MS.gene94558:CDS |
GATATTCCAGAGAGAAAGAT+GGG | 0.540943 | 4.1:+300952 | MS.gene94558:CDS |
CCGTGAGATTGTTGGACAAG+AGG | 0.542206 | 4.1:+301820 | MS.gene94558:CDS |
GTCGTATGATGCTAACCTCC+GGG | 0.550555 | 4.1:+301762 | MS.gene94558:CDS |
AACATGCTTCTAGGGATGGC+GGG | 0.552983 | 4.1:+301875 | MS.gene94558:CDS |
AAAGTACATTCCTCGATACA+TGG | 0.553101 | 4.1:-301210 | None:intergenic |
TGTGGCTTCAGGCAGTGCTG+CGG | 0.558659 | 4.1:+300998 | MS.gene94558:CDS |
TAAAGGTATTAGACAAACCA+AGG | 0.560990 | 4.1:-300356 | None:intergenic |
GGTACATCAAGTGGTTTGCT+GGG | 0.566321 | 4.1:+300973 | MS.gene94558:CDS |
CAAATGATACAAAAGTATTG+AGG | 0.568033 | 4.1:-301030 | None:intergenic |
TGCAAACATGCTTCTAGGGA+TGG | 0.571454 | 4.1:+301871 | MS.gene94558:CDS |
CGTAAAACAATATCAAGTGA+TGG | 0.574072 | 4.1:+301140 | MS.gene94558:CDS |
AACCTCAAAACACCATACCT+TGG | 0.575189 | 4.1:+300339 | MS.gene94558:CDS |
AAGAATCACCTCACCTGTGT+GGG | 0.577980 | 4.1:-300450 | None:intergenic |
GGGAAAATATCTAATAACAT+TGG | 0.589711 | 4.1:-300430 | None:intergenic |
GTATTAGACAAACCAAGGTA+TGG | 0.595810 | 4.1:-300351 | None:intergenic |
CAAGTGGTTTGCTGGGAATG+TGG | 0.602125 | 4.1:+300980 | MS.gene94558:CDS |
AGAAAGATGGGTACATCAAG+TGG | 0.605042 | 4.1:+300964 | MS.gene94558:CDS |
CCTCTTGTCCAACAATCTCA+CGG | 0.613033 | 4.1:-301820 | None:intergenic |
GGTGACCTCTCCAAAAGGCA+AGG | 0.614061 | 4.1:-300404 | None:intergenic |
AAACATGCTTCTAGGGATGG+CGG | 0.631697 | 4.1:+301874 | MS.gene94558:CDS |
ACTGACGCTGACCAGTGGCA+TGG | 0.638244 | 4.1:-301094 | None:intergenic |
AAAGAATCACCTCACCTGTG+TGG | 0.643453 | 4.1:-300451 | None:intergenic |
TTTAAACTGACGCTGACCAG+TGG | 0.653683 | 4.1:-301099 | None:intergenic |
TTGGGAATCACCATGTATCG+AGG | 0.659477 | 4.1:+301200 | MS.gene94558:CDS |
AATCATATCCAAAACTGCAG+TGG | 0.672395 | 4.1:+300257 | MS.gene94558:CDS |
ATGGCACTGGACTGAATCAG+TGG | 0.678456 | 4.1:-301075 | None:intergenic |
GACCTCTCCAAAAGGCAAGG+AGG | 0.692417 | 4.1:-300401 | None:intergenic |
ATACTTATTCTGGTGCCCGG+AGG | 0.698949 | 4.1:-301777 | None:intergenic |
CGGAGGTTAGCATCATACGA+CGG | 0.749578 | 4.1:-301760 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATATAAAAACTCTAATAT+TGG | - | chr4.1:301414-301433 | None:intergenic | 10.0% |
!! | AAGATGTATGTTAAAATTAA+AGG | - | chr4.1:301466-301485 | None:intergenic | 15.0% |
!! | TATGTTAAAATTAAAGGTAA+GGG | - | chr4.1:301460-301479 | None:intergenic | 15.0% |
!! | AATTTCAATTAAACATACAG+AGG | + | chr4.1:300680-300699 | MS.gene94558:intron | 20.0% |
!! | CATTACAAAACAAGTATAAT+AGG | - | chr4.1:300535-300554 | None:intergenic | 20.0% |
!! | GTATGTTAAAATTAAAGGTA+AGG | - | chr4.1:301461-301480 | None:intergenic | 20.0% |
!! | TGAAATTGAGAATTATTTGA+GGG | - | chr4.1:300667-300686 | None:intergenic | 20.0% |
!! | TTGAAATTGAGAATTATTTG+AGG | - | chr4.1:300668-300687 | None:intergenic | 20.0% |
!! | TTGCATTATAATACTTATTC+TGG | - | chr4.1:301790-301809 | None:intergenic | 20.0% |
!! | TTTGATTGGAATACAAAATA+CGG | - | chr4.1:300818-300837 | None:intergenic | 20.0% |
!!! | ATTTTCAAAGGATTTTGTAA+TGG | + | chr4.1:300221-300240 | MS.gene94558:CDS | 20.0% |
!!! | TACTTGTTTTGTAATGTTTT+TGG | + | chr4.1:300539-300558 | MS.gene94558:intron | 20.0% |
!!! | TTTTCAAAGGATTTTGTAAT+GGG | + | chr4.1:300222-300241 | MS.gene94558:CDS | 20.0% |
! | AACATAGATCTATAATTCAC+AGG | + | chr4.1:301312-301331 | MS.gene94558:intron | 25.0% |
! | GGGAAAATATCTAATAACAT+TGG | - | chr4.1:300433-300452 | None:intergenic | 25.0% |
! | TATTTGAGCAAACAGTTAAT+TGG | + | chr4.1:300879-300898 | MS.gene94558:intron | 25.0% |
! | TTGATTGGAATACAAAATAC+GGG | - | chr4.1:300817-300836 | None:intergenic | 25.0% |
!! | AGAATCAGAATCATTTTCAA+AGG | + | chr4.1:300209-300228 | MS.gene94558:CDS | 25.0% |
!! | CTCAATACTTTTGTATCATT+TGG | + | chr4.1:301031-301050 | MS.gene94558:CDS | 25.0% |
!! | TATTATGCTGCTTATATTGA+TGG | + | chr4.1:301429-301448 | MS.gene94558:intron | 25.0% |
!!! | CAAATGATACAAAAGTATTG+AGG | - | chr4.1:301033-301052 | None:intergenic | 25.0% |
!!! | CTTTTGATTTATATTCTGCA+GGG | + | chr4.1:301656-301675 | MS.gene94558:intron | 25.0% |
!!! | TCTTTTGATTTATATTCTGC+AGG | + | chr4.1:301655-301674 | MS.gene94558:intron | 25.0% |
!!! | TTTTGATTTATATTCTGCAG+GGG | + | chr4.1:301657-301676 | MS.gene94558:intron | 25.0% |
AAAAGCTTCACTCTTTCAAT+TGG | - | chr4.1:300285-300304 | None:intergenic | 30.0% | |
AAAGGTCCAACTAAAACAAT+AGG | - | chr4.1:301257-301276 | None:intergenic | 30.0% | |
AACTAAAACAATAGGCTTCA+TGG | - | chr4.1:301249-301268 | None:intergenic | 30.0% | |
AACTAAACTAATGTCCATAG+AGG | - | chr4.1:300641-300660 | None:intergenic | 30.0% | |
AATATCTAATAACATTGGCC+TGG | - | chr4.1:300428-300447 | None:intergenic | 30.0% | |
AGTGATCTAATTACAACACA+CGG | - | chr4.1:300594-300613 | None:intergenic | 30.0% | |
ATCAAAATGCTATACCAACA+AGG | - | chr4.1:301579-301598 | None:intergenic | 30.0% | |
ATCTATAATTCACAGGCAAT+GGG | + | chr4.1:301319-301338 | MS.gene94558:intron | 30.0% | |
ATGAATTTATGTCAGAGCAT+TGG | + | chr4.1:301597-301616 | MS.gene94558:intron | 30.0% | |
ATGAGAATTTGATATACGTG+AGG | - | chr4.1:300709-300728 | None:intergenic | 30.0% | |
ATTAGATCACTAAAAAGTCC+AGG | + | chr4.1:300603-300622 | MS.gene94558:intron | 30.0% | |
CAAAGCGAAATGATTAAAAG+AGG | + | chr4.1:300315-300334 | MS.gene94558:CDS | 30.0% | |
CAAGTTAGACAACAGTAATT+TGG | + | chr4.1:301504-301523 | MS.gene94558:intron | 30.0% | |
CGTAAAACAATATCAAGTGA+TGG | + | chr4.1:301140-301159 | MS.gene94558:CDS | 30.0% | |
GTATAAATGCTTACCTCAAA+AGG | - | chr4.1:301275-301294 | None:intergenic | 30.0% | |
TCAAAATGCTATACCAACAA+GGG | - | chr4.1:301578-301597 | None:intergenic | 30.0% | |
! | CAAACAGTTAATTGGTCTAT+AGG | + | chr4.1:300887-300906 | MS.gene94558:intron | 30.0% |
! | CTCTTTTAATCATTTCGCTT+TGG | - | chr4.1:300317-300336 | None:intergenic | 30.0% |
! | GCTTTCAATTTTGCATTCAA+AGG | + | chr4.1:300909-300928 | MS.gene94558:CDS | 30.0% |
! | TATTAGATATTTTCCCACAC+AGG | + | chr4.1:300437-300456 | MS.gene94558:CDS | 30.0% |
! | TTCAGCAAAGACTCTTTTAA+AGG | - | chr4.1:300376-300395 | None:intergenic | 30.0% |
! | TTCTTTGCTAGTTTCTTGTT+AGG | + | chr4.1:301683-301702 | MS.gene94558:CDS | 30.0% |
!! | TAAAGGTATTAGACAAACCA+AGG | - | chr4.1:300359-300378 | None:intergenic | 30.0% |
!!! | ATGAAGCCTATTGTTTTAGT+TGG | + | chr4.1:301248-301267 | MS.gene94558:CDS | 30.0% |
AAAAGAGTCTTTGCTGAAGA+GGG | + | chr4.1:300378-300397 | MS.gene94558:CDS | 35.0% | |
AAAGTACATTCCTCGATACA+TGG | - | chr4.1:301213-301232 | None:intergenic | 35.0% | |
AATCATATCCAAAACTGCAG+TGG | + | chr4.1:300257-300276 | MS.gene94558:CDS | 35.0% | |
ATAATACTTATTCTGGTGCC+CGG | - | chr4.1:301783-301802 | None:intergenic | 35.0% | |
ATGTATCGAGGAATGTACTT+TGG | + | chr4.1:301212-301231 | MS.gene94558:CDS | 35.0% | |
GATATTCCAGAGAGAAAGAT+GGG | + | chr4.1:300952-300971 | MS.gene94558:CDS | 35.0% | |
GATCTATAATTCACAGGCAA+TGG | + | chr4.1:301318-301337 | MS.gene94558:intron | 35.0% | |
GGGTTAATAATTGCTTCTCT+TGG | + | chr4.1:301350-301369 | MS.gene94558:intron | 35.0% | |
GTATTAGACAAACCAAGGTA+TGG | - | chr4.1:300354-300373 | None:intergenic | 35.0% | |
GTGATCTAATTACAACACAC+GGG | - | chr4.1:300593-300612 | None:intergenic | 35.0% | |
GTTTATTTATGCCCTTGCAT+TGG | + | chr4.1:301624-301643 | MS.gene94558:intron | 35.0% | |
TAAAAGAGTCTTTGCTGAAG+AGG | + | chr4.1:300377-300396 | MS.gene94558:CDS | 35.0% | |
TACTGTGTCTAGATGAGATA+CGG | - | chr4.1:301934-301953 | None:intergenic | 35.0% | |
TATTTACCTCATCTTTGAGC+TGG | + | chr4.1:300493-300512 | MS.gene94558:intron | 35.0% | |
TGTATCGAGGAATGTACTTT+GGG | + | chr4.1:301213-301232 | MS.gene94558:CDS | 35.0% | |
! | AAAGACTGTTATTTGAGAGC+AGG | - | chr4.1:300842-300861 | None:intergenic | 35.0% |
! | AAGACTGTTATTTGAGAGCA+GGG | - | chr4.1:300841-300860 | None:intergenic | 35.0% |
! | ATGCTGGTCATACATTTTCA+AGG | - | chr4.1:300758-300777 | None:intergenic | 35.0% |
! | TGCTGGTCATACATTTTCAA+GGG | - | chr4.1:300757-300776 | None:intergenic | 35.0% |
! | TTGCTAGTTTCTTGTTAGGT+TGG | + | chr4.1:301687-301706 | MS.gene94558:CDS | 35.0% |
! | TTTTTCGTCTGTTCCATGTT+AGG | + | chr4.1:301380-301399 | MS.gene94558:intron | 35.0% |
!! | GGATTCGGTGTTTCAATATT+GGG | + | chr4.1:301182-301201 | MS.gene94558:CDS | 35.0% |
!! | GGTTACTTCAAAAGCATCTT+TGG | + | chr4.1:300930-300949 | MS.gene94558:CDS | 35.0% |
!! | TCAAAGGATTTTGTAATGGG+AGG | + | chr4.1:300225-300244 | MS.gene94558:CDS | 35.0% |
!! | TTTTCAAGGGGTAAAAACGA+TGG | - | chr4.1:300744-300763 | None:intergenic | 35.0% |
!!! | TGTTTTAGTTGGACCTTTTG+AGG | + | chr4.1:301259-301278 | MS.gene94558:CDS | 35.0% |
AACCTCAAAACACCATACCT+TGG | + | chr4.1:300339-300358 | MS.gene94558:CDS | 40.0% | |
AAGACTCGTATTCCAATGCA+AGG | - | chr4.1:301639-301658 | None:intergenic | 40.0% | |
ACAGGCAATGGGAAAATATG+GGG | + | chr4.1:301330-301349 | MS.gene94558:intron | 40.0% | |
AGAAAGATGGGTACATCAAG+TGG | + | chr4.1:300964-300983 | MS.gene94558:CDS | 40.0% | |
AGACTCGTATTCCAATGCAA+GGG | - | chr4.1:301638-301657 | None:intergenic | 40.0% | |
ATACCAACAAGGGATGTATC+TGG | - | chr4.1:301568-301587 | None:intergenic | 40.0% | |
ATTGGCATGCATACCTAACA+TGG | - | chr4.1:301396-301415 | None:intergenic | 40.0% | |
ATTTGAGAGCAGGGTTTGAT+TGG | - | chr4.1:300832-300851 | None:intergenic | 40.0% | |
CACAGGCAATGGGAAAATAT+GGG | + | chr4.1:301329-301348 | MS.gene94558:intron | 40.0% | |
CATTTACCAGCTCAAAGATG+AGG | - | chr4.1:300502-300521 | None:intergenic | 40.0% | |
CTCATCTTTGAGCTGGTAAA+TGG | + | chr4.1:300500-300519 | MS.gene94558:intron | 40.0% | |
GGATATTCCAGAGAGAAAGA+TGG | + | chr4.1:300951-300970 | MS.gene94558:CDS | 40.0% | |
TACCAACAAGGGATGTATCT+GGG | - | chr4.1:301567-301586 | None:intergenic | 40.0% | |
TCACAGGCAATGGGAAAATA+TGG | + | chr4.1:301328-301347 | MS.gene94558:intron | 40.0% | |
TCACTGCAAACATGCTTCTA+GGG | + | chr4.1:301867-301886 | MS.gene94558:CDS | 40.0% | |
! | AACCAAGGTATGGTGTTTTG+AGG | - | chr4.1:300344-300363 | None:intergenic | 40.0% |
!! | ATATCAAGTGATGGTGTTGC+TGG | + | chr4.1:301149-301168 | MS.gene94558:CDS | 40.0% |
!! | GCTGGTCATACATTTTCAAG+GGG | - | chr4.1:300756-300775 | None:intergenic | 40.0% |
!! | GGGATTCGGTGTTTCAATAT+TGG | + | chr4.1:301181-301200 | MS.gene94558:CDS | 40.0% |
!! | GGTTTCTTAGCTCTATTTCG+AGG | + | chr4.1:301842-301861 | MS.gene94558:CDS | 40.0% |
AAAGAATCACCTCACCTGTG+TGG | - | chr4.1:300454-300473 | None:intergenic | 45.0% | |
AAGAATCACCTCACCTGTGT+GGG | - | chr4.1:300453-300472 | None:intergenic | 45.0% | |
ACTGGTCAGCGTCAGTTTAA+AGG | + | chr4.1:301101-301120 | MS.gene94558:CDS | 45.0% | |
CAATGAACACATAGCGATGC+TGG | - | chr4.1:300774-300793 | None:intergenic | 45.0% | |
CATGCATTCCGTGAGATTGT+TGG | + | chr4.1:301812-301831 | MS.gene94558:CDS | 45.0% | |
CCTCTTGTCCAACAATCTCA+CGG | - | chr4.1:301823-301842 | None:intergenic | 45.0% | |
CGTGAGATTGTTGGACAAGA+GGG | + | chr4.1:301821-301840 | MS.gene94558:CDS | 45.0% | |
GATGTACCCATCTTTCTCTC+TGG | - | chr4.1:300961-300980 | None:intergenic | 45.0% | |
GGACTTTGCACGTACAAGAT+TGG | + | chr4.1:301052-301071 | MS.gene94558:CDS | 45.0% | |
GGTCAAATCTCTCTCCTCTA+TGG | + | chr4.1:300624-300643 | MS.gene94558:intron | 45.0% | |
GTCACTGCAAACATGCTTCT+AGG | + | chr4.1:301866-301885 | MS.gene94558:CDS | 45.0% | |
TAGAGGAGAGAGATTTGACC+TGG | - | chr4.1:300624-300643 | None:intergenic | 45.0% | |
TTCCCAGATACATCCCTTGT+TGG | + | chr4.1:301562-301581 | MS.gene94558:intron | 45.0% | |
TTGGGAATCACCATGTATCG+AGG | + | chr4.1:301200-301219 | MS.gene94558:CDS | 45.0% | |
TTTAAACTGACGCTGACCAG+TGG | - | chr4.1:301102-301121 | None:intergenic | 45.0% | |
! | AAACATGCTTCTAGGGATGG+CGG | + | chr4.1:301874-301893 | MS.gene94558:CDS | 45.0% |
! | GATATTTTCCCACACAGGTG+AGG | + | chr4.1:300442-300461 | MS.gene94558:intron | 45.0% |
! | TGCAAACATGCTTCTAGGGA+TGG | + | chr4.1:301871-301890 | MS.gene94558:CDS | 45.0% |
! | TGGAGCATCACAACTGTATC+TGG | + | chr4.1:301707-301726 | MS.gene94558:CDS | 45.0% |
!! | GGTACATCAAGTGGTTTGCT+GGG | + | chr4.1:300973-300992 | MS.gene94558:CDS | 45.0% |
!!! | AATTGGTGCCACTGCAGTTT+TGG | - | chr4.1:300268-300287 | None:intergenic | 45.0% |
ATACTTATTCTGGTGCCCGG+AGG | - | chr4.1:301780-301799 | None:intergenic | 50.0% | |
CCGTGAGATTGTTGGACAAG+AGG | + | chr4.1:301820-301839 | MS.gene94558:CDS | 50.0% | |
CGACGGCGTAATGTGTCAAA+AGG | - | chr4.1:301746-301765 | None:intergenic | 50.0% | |
CGGAGGTTAGCATCATACGA+CGG | - | chr4.1:301763-301782 | None:intergenic | 50.0% | |
CGTCGTATGATGCTAACCTC+CGG | + | chr4.1:301761-301780 | MS.gene94558:CDS | 50.0% | |
GTCGTATGATGCTAACCTCC+GGG | + | chr4.1:301762-301781 | MS.gene94558:CDS | 50.0% | |
TTTGCTGGGAATGTGGCTTC+AGG | + | chr4.1:300987-301006 | MS.gene94558:CDS | 50.0% | |
! | AACATGCTTCTAGGGATGGC+GGG | + | chr4.1:301875-301894 | MS.gene94558:CDS | 50.0% |
! | ATGGCACTGGACTGAATCAG+TGG | - | chr4.1:301078-301097 | None:intergenic | 50.0% |
! | GGGTACATCAAGTGGTTTGC+TGG | + | chr4.1:300972-300991 | MS.gene94558:CDS | 50.0% |
!! | ATGGTGTTGCTGGCTTGTAC+AGG | + | chr4.1:301159-301178 | MS.gene94558:CDS | 50.0% |
!! | CAAGTGGTTTGCTGGGAATG+TGG | + | chr4.1:300980-300999 | MS.gene94558:CDS | 50.0% |
!! | TGGTGTTGCTGGCTTGTACA+GGG | + | chr4.1:301160-301179 | MS.gene94558:CDS | 50.0% |
GACCTCTCCAAAAGGCAAGG+AGG | - | chr4.1:300404-300423 | None:intergenic | 55.0% | |
GGTGACCTCTCCAAAAGGCA+AGG | - | chr4.1:300407-300426 | None:intergenic | 55.0% | |
! | AAGAGGGCCTCCTTGCCTTT+TGG | + | chr4.1:300394-300413 | MS.gene94558:CDS | 55.0% |
!! | GCTGGCTTGTACAGGGGATT+CGG | + | chr4.1:301167-301186 | MS.gene94558:CDS | 55.0% |
!! | GGTGTTGCTGGCTTGTACAG+GGG | + | chr4.1:301161-301180 | MS.gene94558:CDS | 55.0% |
!! | TGCCTTTTGGAGAGGTCACC+AGG | + | chr4.1:300407-300426 | MS.gene94558:CDS | 55.0% |
ACTGACGCTGACCAGTGGCA+TGG | - | chr4.1:301097-301116 | None:intergenic | 60.0% | |
GGCCTGGTGACCTCTCCAAA+AGG | - | chr4.1:300412-300431 | None:intergenic | 60.0% | |
TCAGTCCAGTGCCATGCCAC+TGG | + | chr4.1:301083-301102 | MS.gene94558:CDS | 60.0% | |
TGTGGCTTCAGGCAGTGCTG+CGG | + | chr4.1:300998-301017 | MS.gene94558:CDS | 60.0% | |
!! | GGCCTCCTTGCCTTTTGGAG+AGG | + | chr4.1:300399-300418 | MS.gene94558:CDS | 60.0% |
!! | TTCTAGGGATGGCGGGAGCT+GGG | + | chr4.1:301882-301901 | MS.gene94558:CDS | 60.0% |
GCTGACCAGTGGCATGGCAC+TGG | - | chr4.1:301091-301110 | None:intergenic | 65.0% | |
GTGGCTTCAGGCAGTGCTGC+GGG | + | chr4.1:300999-301018 | MS.gene94558:CDS | 65.0% | |
!! | CTTCTAGGGATGGCGGGAGC+TGG | + | chr4.1:301881-301900 | MS.gene94558:CDS | 65.0% |
!! | TCTAGGGATGGCGGGAGCTG+GGG | + | chr4.1:301883-301902 | MS.gene94558:CDS | 65.0% |
! | CGGGAGCTGGGGTGCTTGCT+GGG | + | chr4.1:301894-301913 | MS.gene94558:CDS | 70.0% |
! | GCGGGAGCTGGGGTGCTTGC+TGG | + | chr4.1:301893-301912 | MS.gene94558:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 300198 | 301988 | 300198 | ID=MS.gene94558 |
chr4.1 | mRNA | 300198 | 301988 | 300198 | ID=MS.gene94558.t1;Parent=MS.gene94558 |
chr4.1 | exon | 300198 | 300458 | 300198 | ID=MS.gene94558.t1.exon1;Parent=MS.gene94558.t1 |
chr4.1 | CDS | 300198 | 300458 | 300198 | ID=cds.MS.gene94558.t1;Parent=MS.gene94558.t1 |
chr4.1 | exon | 300909 | 301280 | 300909 | ID=MS.gene94558.t1.exon2;Parent=MS.gene94558.t1 |
chr4.1 | CDS | 300909 | 301280 | 300909 | ID=cds.MS.gene94558.t1;Parent=MS.gene94558.t1 |
chr4.1 | exon | 301677 | 301988 | 301677 | ID=MS.gene94558.t1.exon3;Parent=MS.gene94558.t1 |
chr4.1 | CDS | 301677 | 301988 | 301677 | ID=cds.MS.gene94558.t1;Parent=MS.gene94558.t1 |
Gene Sequence |
Protein sequence |