Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32809.t1 | XP_003603158.1 | 98.5 | 328 | 1 | 3 | 1 | 326 | 1 | 326 | 7.10E-177 | 629.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32809.t1 | Q9FM86 | 75.9 | 328 | 73 | 3 | 1 | 324 | 3 | 328 | 8.3e-142 | 504.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32809.t1 | G7J7N8 | 98.5 | 328 | 1 | 3 | 1 | 326 | 1 | 326 | 5.1e-177 | 629.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050317 | MS.gene32809 | 0.801662 | 8.10E-49 | -1.69E-46 |
MS.gene051756 | MS.gene32809 | 0.804643 | 1.96E-49 | -1.69E-46 |
MS.gene051975 | MS.gene32809 | 0.806755 | 7.05E-50 | -1.69E-46 |
MS.gene053058 | MS.gene32809 | 0.80658 | 7.68E-50 | -1.69E-46 |
MS.gene056787 | MS.gene32809 | 0.813005 | 3.19E-51 | -1.69E-46 |
MS.gene056849 | MS.gene32809 | 0.813243 | 2.82E-51 | -1.69E-46 |
MS.gene056986 | MS.gene32809 | 0.841558 | 4.42E-58 | -1.69E-46 |
MS.gene057234 | MS.gene32809 | 0.80894 | 2.42E-50 | -1.69E-46 |
MS.gene057999 | MS.gene32809 | 0.833463 | 5.26E-56 | -1.69E-46 |
MS.gene058238 | MS.gene32809 | 0.814048 | 1.88E-51 | -1.69E-46 |
MS.gene06011 | MS.gene32809 | 0.833758 | 4.44E-56 | -1.69E-46 |
MS.gene060297 | MS.gene32809 | 0.823215 | 1.56E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene064047 | MS.gene32809 | PPI |
MS.gene32809 | MS.gene040118 | PPI |
MS.gene32809 | MS.gene072377 | PPI |
MS.gene32809 | MS.gene82276 | PPI |
MS.gene04593 | MS.gene32809 | PPI |
MS.gene064043 | MS.gene32809 | PPI |
MS.gene32809 | MS.gene031696 | PPI |
MS.gene074631 | MS.gene32809 | PPI |
MS.gene32809 | MS.gene074632 | PPI |
MS.gene32809 | MS.gene046998 | PPI |
MS.gene017957 | MS.gene32809 | PPI |
MS.gene32809 | MS.gene60471 | PPI |
MS.gene32809 | MS.gene016690 | PPI |
MS.gene065946 | MS.gene32809 | PPI |
MS.gene32809 | MS.gene94558 | PPI |
MS.gene66338 | MS.gene32809 | PPI |
MS.gene32809 | MS.gene006614 | PPI |
MS.gene32809 | MS.gene23588 | PPI |
MS.gene75068 | MS.gene32809 | PPI |
MS.gene32809 | MS.gene46786 | PPI |
MS.gene065947 | MS.gene32809 | PPI |
MS.gene79071 | MS.gene32809 | PPI |
MS.gene064041 | MS.gene32809 | PPI |
MS.gene93756 | MS.gene32809 | PPI |
MS.gene32809 | MS.gene045584 | PPI |
MS.gene030289 | MS.gene32809 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32809.t1 | MTR_3g104500 | 98.476 | 328 | 1 | 3 | 1 | 326 | 1 | 326 | 0.0 | 652 |
MS.gene32809.t1 | MTR_8g036880 | 39.667 | 300 | 168 | 6 | 28 | 321 | 97 | 389 | 3.04e-63 | 206 |
MS.gene32809.t1 | MTR_2g098070 | 40.328 | 305 | 170 | 6 | 22 | 321 | 55 | 352 | 7.65e-63 | 204 |
MS.gene32809.t1 | MTR_4g078545 | 40.000 | 295 | 165 | 6 | 29 | 318 | 71 | 358 | 5.77e-62 | 201 |
MS.gene32809.t1 | MTR_3g028590 | 39.731 | 297 | 167 | 6 | 27 | 318 | 91 | 380 | 6.03e-61 | 199 |
MS.gene32809.t1 | MTR_3g028590 | 39.731 | 297 | 167 | 6 | 27 | 318 | 87 | 376 | 9.09e-61 | 199 |
MS.gene32809.t1 | MTR_8g107270 | 36.332 | 289 | 172 | 6 | 38 | 319 | 19 | 302 | 7.60e-58 | 189 |
MS.gene32809.t1 | MTR_3g104600 | 30.838 | 334 | 189 | 9 | 12 | 321 | 14 | 329 | 4.89e-40 | 144 |
MS.gene32809.t1 | MTR_6g091800 | 29.355 | 310 | 184 | 9 | 29 | 321 | 15 | 306 | 1.67e-37 | 136 |
MS.gene32809.t1 | MTR_6g091800 | 24.038 | 208 | 145 | 4 | 32 | 233 | 114 | 314 | 5.93e-14 | 71.6 |
MS.gene32809.t1 | MTR_4g119770 | 26.994 | 326 | 207 | 6 | 24 | 322 | 5 | 326 | 5.78e-36 | 132 |
MS.gene32809.t1 | MTR_8g027975 | 30.312 | 320 | 189 | 9 | 26 | 321 | 44 | 353 | 2.67e-35 | 131 |
MS.gene32809.t1 | MTR_5g009500 | 27.954 | 347 | 208 | 9 | 2 | 321 | 7 | 338 | 1.73e-34 | 129 |
MS.gene32809.t1 | MTR_6g091800 | 26.347 | 334 | 187 | 8 | 29 | 321 | 15 | 330 | 4.18e-34 | 128 |
MS.gene32809.t1 | MTR_6g091800 | 24.138 | 232 | 139 | 7 | 32 | 233 | 114 | 338 | 8.60e-12 | 65.5 |
MS.gene32809.t1 | MTR_6g091800 | 30.072 | 276 | 159 | 8 | 29 | 288 | 15 | 272 | 7.55e-34 | 125 |
MS.gene32809.t1 | MTR_6g091800 | 31.076 | 251 | 141 | 7 | 29 | 265 | 15 | 247 | 8.42e-34 | 125 |
MS.gene32809.t1 | MTR_2g436930 | 26.710 | 307 | 197 | 5 | 35 | 317 | 17 | 319 | 2.00e-33 | 125 |
MS.gene32809.t1 | MTR_7g064980 | 29.431 | 299 | 196 | 7 | 32 | 322 | 24 | 315 | 4.29e-33 | 124 |
MS.gene32809.t1 | MTR_6g091800 | 26.032 | 315 | 175 | 7 | 29 | 303 | 15 | 311 | 3.89e-31 | 119 |
MS.gene32809.t1 | MTR_6g091800 | 26.667 | 300 | 162 | 7 | 29 | 288 | 15 | 296 | 1.75e-30 | 117 |
MS.gene32809.t1 | MTR_6g091800 | 27.273 | 275 | 144 | 6 | 29 | 265 | 15 | 271 | 2.24e-30 | 117 |
MS.gene32809.t1 | MTR_8g096050 | 27.273 | 308 | 193 | 8 | 24 | 322 | 218 | 503 | 1.30e-29 | 118 |
MS.gene32809.t1 | MTR_7g084400 | 28.808 | 302 | 179 | 9 | 31 | 322 | 211 | 486 | 3.59e-29 | 117 |
MS.gene32809.t1 | MTR_7g068340 | 29.643 | 280 | 172 | 7 | 45 | 321 | 99 | 356 | 3.06e-28 | 113 |
MS.gene32809.t1 | MTR_3g098460 | 25.723 | 311 | 194 | 8 | 24 | 322 | 196 | 481 | 6.74e-28 | 113 |
MS.gene32809.t1 | MTR_4g119770 | 28.352 | 261 | 164 | 5 | 24 | 266 | 5 | 260 | 8.24e-28 | 109 |
MS.gene32809.t1 | MTR_5g081150 | 30.068 | 296 | 193 | 7 | 32 | 321 | 33 | 320 | 3.99e-27 | 108 |
MS.gene32809.t1 | MTR_6g034145 | 28.626 | 262 | 160 | 8 | 77 | 321 | 1 | 252 | 1.61e-26 | 105 |
MS.gene32809.t1 | MTR_6g034145 | 24.038 | 208 | 145 | 5 | 32 | 233 | 60 | 260 | 2.69e-13 | 69.3 |
MS.gene32809.t1 | MTR_7g109135 | 29.210 | 291 | 194 | 5 | 35 | 321 | 24 | 306 | 3.73e-26 | 106 |
MS.gene32809.t1 | MTR_7g109135 | 29.000 | 200 | 132 | 5 | 127 | 321 | 12 | 206 | 3.29e-15 | 75.5 |
MS.gene32809.t1 | MTR_6g091800 | 31.868 | 182 | 102 | 5 | 29 | 200 | 15 | 184 | 1.59e-25 | 101 |
MS.gene32809.t1 | MTR_4g016730 | 30.035 | 283 | 164 | 9 | 45 | 321 | 101 | 355 | 2.02e-24 | 102 |
MS.gene32809.t1 | MTR_6g092210 | 27.734 | 256 | 164 | 8 | 77 | 321 | 1 | 246 | 4.13e-24 | 99.4 |
MS.gene32809.t1 | MTR_6g092210 | 23.153 | 203 | 147 | 4 | 32 | 233 | 60 | 254 | 6.91e-12 | 65.1 |
MS.gene32809.t1 | MTR_1g012030 | 26.962 | 293 | 193 | 7 | 31 | 321 | 137 | 410 | 3.15e-23 | 99.8 |
MS.gene32809.t1 | MTR_7g109135 | 30.043 | 233 | 154 | 4 | 93 | 321 | 1 | 228 | 4.21e-23 | 96.3 |
MS.gene32809.t1 | MTR_3g107510 | 26.531 | 294 | 193 | 8 | 31 | 321 | 120 | 393 | 2.55e-22 | 96.7 |
MS.gene32809.t1 | MTR_3g107510 | 26.699 | 206 | 124 | 5 | 33 | 232 | 216 | 400 | 6.17e-16 | 78.2 |
MS.gene32809.t1 | MTR_1g087840 | 27.758 | 281 | 191 | 5 | 45 | 321 | 31 | 303 | 2.55e-22 | 95.5 |
MS.gene32809.t1 | MTR_1g087840 | 29.648 | 199 | 131 | 6 | 127 | 318 | 4 | 200 | 2.46e-11 | 63.9 |
MS.gene32809.t1 | MTR_6g091800 | 26.699 | 206 | 105 | 4 | 29 | 200 | 15 | 208 | 6.51e-22 | 92.4 |
MS.gene32809.t1 | MTR_7g109135 | 28.179 | 291 | 190 | 6 | 35 | 321 | 24 | 299 | 8.71e-22 | 94.0 |
MS.gene32809.t1 | MTR_7g109135 | 28.283 | 198 | 129 | 5 | 127 | 321 | 12 | 199 | 6.92e-13 | 68.6 |
MS.gene32809.t1 | MTR_4g114320 | 27.157 | 313 | 205 | 10 | 12 | 321 | 102 | 394 | 1.94e-21 | 94.4 |
MS.gene32809.t1 | MTR_4g114320 | 29.798 | 198 | 115 | 5 | 34 | 227 | 219 | 396 | 2.01e-15 | 76.6 |
MS.gene32809.t1 | MTR_5g055410 | 27.875 | 287 | 183 | 8 | 45 | 321 | 33 | 305 | 3.38e-20 | 90.1 |
MS.gene32809.t1 | MTR_2g436930 | 25.217 | 230 | 150 | 4 | 106 | 317 | 4 | 229 | 3.58e-20 | 88.2 |
MS.gene32809.t1 | MTR_3g074490 | 25.723 | 346 | 209 | 8 | 1 | 321 | 80 | 402 | 1.49e-19 | 89.0 |
MS.gene32809.t1 | MTR_7g084400 | 29.592 | 196 | 120 | 4 | 31 | 224 | 205 | 384 | 3.52e-19 | 87.8 |
MS.gene32809.t1 | MTR_8g066975 | 25.083 | 303 | 206 | 11 | 27 | 319 | 2 | 293 | 3.92e-19 | 86.3 |
MS.gene32809.t1 | MTR_5g081150 | 35.976 | 164 | 93 | 5 | 32 | 191 | 33 | 188 | 4.67e-19 | 85.1 |
MS.gene32809.t1 | MTR_4g018750 | 25.818 | 275 | 192 | 4 | 49 | 320 | 31 | 296 | 5.82e-19 | 85.9 |
MS.gene32809.t1 | MTR_5g081150 | 35.976 | 164 | 93 | 5 | 32 | 191 | 33 | 188 | 6.21e-19 | 85.1 |
MS.gene32809.t1 | MTR_7g109135 | 30.435 | 207 | 135 | 4 | 119 | 321 | 6 | 207 | 8.19e-19 | 84.0 |
MS.gene32809.t1 | MTR_3g100570 | 24.281 | 313 | 204 | 8 | 37 | 322 | 5 | 311 | 2.41e-18 | 84.3 |
MS.gene32809.t1 | MTR_6g091910 | 24.880 | 209 | 146 | 4 | 29 | 233 | 15 | 216 | 8.93e-18 | 80.9 |
MS.gene32809.t1 | MTR_6g091910 | 25.628 | 199 | 127 | 5 | 138 | 321 | 16 | 208 | 3.77e-11 | 62.4 |
MS.gene32809.t1 | MTR_5g030530 | 23.102 | 303 | 214 | 9 | 26 | 319 | 1 | 293 | 2.44e-17 | 81.3 |
MS.gene32809.t1 | MTR_7g066690 | 23.466 | 277 | 198 | 5 | 49 | 321 | 33 | 299 | 6.56e-17 | 80.1 |
MS.gene32809.t1 | MTR_7g066690 | 28.641 | 206 | 134 | 6 | 124 | 319 | 3 | 205 | 6.88e-16 | 77.4 |
MS.gene32809.t1 | MTR_4g088545 | 27.363 | 201 | 130 | 6 | 133 | 322 | 4 | 199 | 7.91e-16 | 76.3 |
MS.gene32809.t1 | MTR_4g088545 | 27.363 | 201 | 130 | 6 | 133 | 322 | 4 | 199 | 1.90e-15 | 75.5 |
MS.gene32809.t1 | MTR_4g057850 | 24.211 | 285 | 187 | 8 | 36 | 311 | 28 | 292 | 2.16e-15 | 75.9 |
MS.gene32809.t1 | MTR_5g032420 | 23.922 | 255 | 179 | 7 | 76 | 322 | 73 | 320 | 2.28e-15 | 75.9 |
MS.gene32809.t1 | MTR_4g088545 | 27.363 | 201 | 130 | 6 | 133 | 322 | 4 | 199 | 2.31e-15 | 75.9 |
MS.gene32809.t1 | MTR_7g117030 | 23.964 | 338 | 219 | 9 | 16 | 320 | 1 | 333 | 3.99e-15 | 75.5 |
MS.gene32809.t1 | MTR_4g005330 | 25.723 | 311 | 185 | 12 | 31 | 319 | 64 | 350 | 1.44e-14 | 73.9 |
MS.gene32809.t1 | MTR_3g025800 | 27.136 | 199 | 124 | 4 | 141 | 319 | 28 | 225 | 1.79e-14 | 73.6 |
MS.gene32809.t1 | MTR_8g090210 | 25.714 | 315 | 190 | 9 | 28 | 321 | 105 | 396 | 1.89e-14 | 73.9 |
MS.gene32809.t1 | MTR_3g462140 | 22.648 | 287 | 210 | 4 | 20 | 303 | 2 | 279 | 4.02e-14 | 72.0 |
MS.gene32809.t1 | MTR_4g018750 | 24.793 | 242 | 171 | 3 | 49 | 288 | 31 | 263 | 7.53e-14 | 71.2 |
MS.gene32809.t1 | MTR_4g005330 | 25.649 | 308 | 183 | 12 | 34 | 319 | 1 | 284 | 8.70e-14 | 71.2 |
MS.gene32809.t1 | MTR_8g076760 | 26.347 | 167 | 121 | 2 | 155 | 319 | 28 | 194 | 1.49e-13 | 70.5 |
MS.gene32809.t1 | MTR_1g105410 | 21.543 | 311 | 199 | 11 | 35 | 323 | 13 | 300 | 3.76e-13 | 69.3 |
MS.gene32809.t1 | MTR_2g032610 | 25.899 | 278 | 173 | 11 | 36 | 296 | 32 | 293 | 1.21e-11 | 65.1 |
MS.gene32809.t1 | MTR_1g097890 | 24.092 | 303 | 178 | 10 | 2 | 296 | 20 | 278 | 2.37e-11 | 63.9 |
MS.gene32809.t1 | MTR_2g102010 | 27.673 | 159 | 107 | 4 | 46 | 204 | 123 | 273 | 9.48e-11 | 62.0 |
MS.gene32809.t1 | MTR_7g015870 | 27.083 | 192 | 122 | 5 | 141 | 321 | 25 | 209 | 9.76e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32809.t1 | AT5G56450 | 75.915 | 328 | 73 | 3 | 1 | 324 | 3 | 328 | 0.0 | 518 |
MS.gene32809.t1 | AT5G13490 | 39.799 | 299 | 167 | 6 | 26 | 318 | 81 | 372 | 2.63e-63 | 206 |
MS.gene32809.t1 | AT5G13490 | 39.799 | 299 | 167 | 6 | 26 | 318 | 81 | 372 | 2.63e-63 | 206 |
MS.gene32809.t1 | AT5G17400 | 36.964 | 303 | 175 | 8 | 29 | 323 | 10 | 304 | 1.15e-62 | 201 |
MS.gene32809.t1 | AT3G08580 | 39.465 | 299 | 168 | 6 | 26 | 318 | 77 | 368 | 2.44e-62 | 203 |
MS.gene32809.t1 | AT3G08580 | 39.465 | 299 | 168 | 6 | 26 | 318 | 77 | 368 | 2.44e-62 | 203 |
MS.gene32809.t1 | AT4G28390 | 38.983 | 295 | 168 | 6 | 29 | 318 | 79 | 366 | 1.27e-59 | 196 |
MS.gene32809.t1 | AT4G28390 | 38.983 | 295 | 168 | 6 | 29 | 318 | 79 | 366 | 1.27e-59 | 196 |
MS.gene32809.t1 | AT4G26180 | 31.922 | 307 | 175 | 10 | 29 | 318 | 17 | 306 | 2.76e-37 | 136 |
MS.gene32809.t1 | AT4G01100 | 29.859 | 355 | 204 | 9 | 1 | 321 | 1 | 344 | 8.04e-37 | 135 |
MS.gene32809.t1 | AT4G26180 | 31.959 | 291 | 165 | 9 | 29 | 303 | 17 | 290 | 3.34e-36 | 132 |
MS.gene32809.t1 | AT4G01100 | 28.689 | 366 | 208 | 9 | 1 | 321 | 1 | 358 | 1.11e-34 | 130 |
MS.gene32809.t1 | AT3G53940 | 29.970 | 337 | 197 | 13 | 2 | 322 | 48 | 361 | 6.23e-34 | 128 |
MS.gene32809.t1 | AT5G48970 | 28.431 | 306 | 188 | 6 | 32 | 310 | 21 | 322 | 8.49e-34 | 127 |
MS.gene32809.t1 | AT3G51870 | 32.028 | 281 | 166 | 8 | 44 | 321 | 102 | 360 | 3.85e-33 | 126 |
MS.gene32809.t1 | AT2G37890 | 29.936 | 314 | 188 | 14 | 24 | 322 | 37 | 333 | 1.18e-32 | 124 |
MS.gene32809.t1 | AT2G37890 | 24.286 | 210 | 145 | 3 | 19 | 227 | 138 | 334 | 6.42e-13 | 68.9 |
MS.gene32809.t1 | AT4G01100 | 30.464 | 302 | 174 | 8 | 45 | 321 | 4 | 294 | 5.98e-32 | 121 |
MS.gene32809.t1 | AT1G14560 | 30.897 | 301 | 165 | 11 | 45 | 321 | 39 | 320 | 1.46e-31 | 121 |
MS.gene32809.t1 | AT5G01500 | 31.206 | 282 | 167 | 8 | 44 | 321 | 130 | 388 | 1.89e-30 | 119 |
MS.gene32809.t1 | AT1G14560 | 31.206 | 282 | 152 | 10 | 45 | 303 | 39 | 301 | 6.81e-30 | 116 |
MS.gene32809.t1 | AT3G21390 | 25.962 | 312 | 201 | 5 | 32 | 317 | 18 | 325 | 6.81e-29 | 114 |
MS.gene32809.t1 | AT5G61810 | 28.912 | 294 | 174 | 9 | 33 | 319 | 65 | 330 | 9.34e-29 | 113 |
MS.gene32809.t1 | AT3G21390 | 26.230 | 305 | 195 | 5 | 32 | 310 | 40 | 340 | 1.50e-28 | 113 |
MS.gene32809.t1 | AT5G61810 | 28.912 | 294 | 174 | 9 | 33 | 319 | 208 | 473 | 2.53e-28 | 114 |
MS.gene32809.t1 | AT3G55640 | 29.022 | 317 | 199 | 11 | 22 | 322 | 20 | 326 | 6.63e-28 | 111 |
MS.gene32809.t1 | AT3G55640 | 29.022 | 317 | 199 | 11 | 22 | 322 | 20 | 326 | 6.63e-28 | 111 |
MS.gene32809.t1 | AT5G48970 | 28.862 | 246 | 150 | 4 | 86 | 310 | 10 | 251 | 3.56e-27 | 107 |
MS.gene32809.t1 | AT5G07320 | 27.972 | 286 | 167 | 10 | 45 | 321 | 221 | 476 | 7.93e-24 | 102 |
MS.gene32809.t1 | AT5G51050 | 26.756 | 299 | 185 | 9 | 33 | 322 | 223 | 496 | 2.06e-23 | 100 |
MS.gene32809.t1 | AT4G32400 | 26.871 | 294 | 192 | 7 | 31 | 321 | 112 | 385 | 6.94e-23 | 98.2 |
MS.gene32809.t1 | AT4G32400 | 29.268 | 205 | 118 | 6 | 32 | 230 | 207 | 390 | 2.38e-16 | 79.7 |
MS.gene32809.t1 | AT3G53940 | 31.004 | 229 | 132 | 7 | 2 | 222 | 48 | 258 | 8.16e-23 | 96.7 |
MS.gene32809.t1 | AT3G55640 | 30.806 | 211 | 131 | 5 | 22 | 223 | 20 | 224 | 9.24e-21 | 90.1 |
MS.gene32809.t1 | AT3G55640 | 30.806 | 211 | 131 | 5 | 22 | 223 | 20 | 224 | 9.24e-21 | 90.1 |
MS.gene32809.t1 | AT1G14560 | 30.952 | 210 | 116 | 6 | 135 | 321 | 19 | 222 | 1.48e-20 | 89.0 |
MS.gene32809.t1 | AT1G25380 | 27.660 | 282 | 189 | 8 | 45 | 320 | 33 | 305 | 3.04e-20 | 90.5 |
MS.gene32809.t1 | AT1G25380 | 27.660 | 282 | 189 | 8 | 45 | 320 | 33 | 305 | 3.04e-20 | 90.5 |
MS.gene32809.t1 | AT2G47490 | 27.046 | 281 | 192 | 6 | 45 | 321 | 29 | 300 | 2.14e-19 | 87.4 |
MS.gene32809.t1 | AT3G54110 | 26.014 | 296 | 181 | 9 | 41 | 321 | 25 | 297 | 2.51e-19 | 87.0 |
MS.gene32809.t1 | AT3G54110 | 25.926 | 189 | 131 | 4 | 140 | 319 | 14 | 202 | 4.61e-13 | 69.3 |
MS.gene32809.t1 | AT3G20240 | 24.430 | 307 | 194 | 9 | 31 | 319 | 50 | 336 | 4.85e-19 | 87.0 |
MS.gene32809.t1 | AT5G58970 | 24.662 | 296 | 209 | 5 | 28 | 319 | 11 | 296 | 3.55e-18 | 84.0 |
MS.gene32809.t1 | AT1G78180 | 26.183 | 317 | 186 | 7 | 28 | 321 | 123 | 414 | 5.12e-17 | 81.6 |
MS.gene32809.t1 | AT5G64970 | 27.124 | 306 | 175 | 7 | 28 | 310 | 130 | 410 | 5.76e-17 | 81.6 |
MS.gene32809.t1 | AT5G46800 | 25.497 | 302 | 201 | 10 | 31 | 319 | 6 | 296 | 6.20e-16 | 77.4 |
MS.gene32809.t1 | AT5G46800 | 25.497 | 302 | 201 | 10 | 31 | 319 | 6 | 296 | 6.20e-16 | 77.4 |
MS.gene32809.t1 | AT5G46800 | 25.497 | 302 | 201 | 10 | 31 | 319 | 6 | 296 | 6.20e-16 | 77.4 |
MS.gene32809.t1 | AT5G64970 | 26.756 | 299 | 171 | 7 | 28 | 303 | 130 | 403 | 7.23e-16 | 78.2 |
MS.gene32809.t1 | AT5G64970 | 26.625 | 323 | 183 | 8 | 20 | 319 | 4 | 295 | 7.55e-16 | 77.4 |
MS.gene32809.t1 | AT2G22500 | 26.122 | 245 | 167 | 6 | 83 | 320 | 70 | 307 | 3.15e-14 | 72.8 |
MS.gene32809.t1 | AT5G58970 | 27.895 | 190 | 127 | 5 | 140 | 319 | 15 | 204 | 3.77e-14 | 72.0 |
MS.gene32809.t1 | AT2G46320 | 21.972 | 355 | 229 | 6 | 10 | 320 | 3 | 353 | 4.27e-14 | 72.8 |
MS.gene32809.t1 | AT2G33820 | 26.842 | 190 | 123 | 6 | 140 | 318 | 17 | 201 | 9.03e-14 | 71.2 |
MS.gene32809.t1 | AT2G33820 | 26.804 | 194 | 126 | 6 | 136 | 318 | 13 | 201 | 1.03e-13 | 70.5 |
MS.gene32809.t1 | AT1G14140 | 24.231 | 260 | 178 | 10 | 44 | 296 | 27 | 274 | 1.08e-13 | 70.9 |
MS.gene32809.t1 | AT5G01340 | 24.832 | 298 | 181 | 11 | 39 | 317 | 22 | 295 | 3.37e-13 | 69.7 |
MS.gene32809.t1 | AT5G66380 | 27.225 | 191 | 124 | 5 | 140 | 321 | 9 | 193 | 5.40e-13 | 68.9 |
MS.gene32809.t1 | AT5G66380 | 22.742 | 299 | 211 | 7 | 35 | 322 | 12 | 301 | 1.34e-11 | 64.7 |
MS.gene32809.t1 | AT4G24570 | 24.180 | 244 | 172 | 5 | 82 | 321 | 76 | 310 | 1.04e-12 | 68.2 |
MS.gene32809.t1 | AT1G34065 | 28.821 | 229 | 127 | 8 | 7 | 230 | 136 | 333 | 1.43e-12 | 68.2 |
MS.gene32809.t1 | AT1G34065 | 28.821 | 229 | 127 | 8 | 7 | 230 | 143 | 340 | 1.55e-12 | 67.8 |
MS.gene32809.t1 | AT4G27940 | 23.132 | 281 | 189 | 5 | 61 | 321 | 133 | 406 | 1.67e-12 | 68.2 |
MS.gene32809.t1 | AT2G30160 | 24.510 | 306 | 200 | 11 | 28 | 322 | 37 | 322 | 4.85e-12 | 66.2 |
MS.gene32809.t1 | AT1G74240 | 23.858 | 197 | 129 | 3 | 140 | 316 | 35 | 230 | 5.93e-12 | 66.2 |
MS.gene32809.t1 | AT5G27520 | 22.186 | 311 | 197 | 11 | 35 | 323 | 15 | 302 | 2.98e-11 | 63.9 |
MS.gene32809.t1 | AT2G33820 | 25.743 | 202 | 126 | 7 | 136 | 318 | 13 | 209 | 3.68e-11 | 63.5 |
MS.gene32809.t1 | AT3G05290 | 22.508 | 311 | 196 | 11 | 35 | 323 | 13 | 300 | 7.09e-11 | 62.8 |
MS.gene32809.t1 | AT1G07030 | 21.523 | 302 | 211 | 6 | 28 | 322 | 35 | 317 | 9.30e-11 | 62.4 |
Find 87 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTTTACAAAAGCATATTA+AGG | 0.230398 | 3.1:+82404710 | MS.gene32809:CDS |
GCAGACACAAGAAAGTAATT+TGG | 0.276307 | 3.1:+82401602 | MS.gene32809:CDS |
TGCACTCAATTTCTCTCTTA+AGG | 0.286938 | 3.1:+82401755 | MS.gene32809:CDS |
ATTGTATTATTCGTACTGTT+AGG | 0.303928 | 3.1:+82401667 | MS.gene32809:CDS |
GAGCAGTTTCGAATGTGTTT+AGG | 0.310097 | 3.1:+82405250 | MS.gene32809:CDS |
TCTCTTTGTGGCGTGGTAAT+GGG | 0.341488 | 3.1:+82401703 | MS.gene32809:CDS |
ATCTCTTTGTGGCGTGGTAA+TGG | 0.347053 | 3.1:+82401702 | MS.gene32809:CDS |
AGGTCAAGAAATTTATGAAC+TGG | 0.380390 | 3.1:+82405310 | MS.gene32809:CDS |
TCTTATGGCTGGTGCGGTGA+TGG | 0.394510 | 3.1:+82401527 | MS.gene32809:CDS |
GCTCCAGAGAAAATATTATC+AGG | 0.395058 | 3.1:-82404751 | None:intergenic |
TCTTTACAAAAGCATATTAA+GGG | 0.444375 | 3.1:+82404711 | MS.gene32809:CDS |
TATTCCAGAAAGACGGGGTA+CGG | 0.444967 | 3.1:+82404923 | MS.gene32809:CDS |
TCGAATGTGTTTAGGAGCAC+TGG | 0.445834 | 3.1:+82405258 | MS.gene32809:CDS |
ATTCGTACTGTTAGGGAAGA+AGG | 0.446792 | 3.1:+82401675 | MS.gene32809:CDS |
CTTATGGCTGGTGCGGTGAT+GGG | 0.449033 | 3.1:+82401528 | MS.gene32809:CDS |
GGAATATAGTGGCTAAGAAA+TGG | 0.449880 | 3.1:-82404906 | None:intergenic |
TCCAATGTCAGCAGCAAGGC+GGG | 0.451091 | 3.1:-82404851 | None:intergenic |
ATTCCAGAAAGACGGGGTAC+GGG | 0.453968 | 3.1:+82404924 | MS.gene32809:CDS |
GGCGGGTGTGTGCAATATCA+AGG | 0.457851 | 3.1:-82404834 | None:intergenic |
CGGAGAATGATGATGCAGTC+TGG | 0.466596 | 3.1:+82405144 | MS.gene32809:CDS |
AGTTACAACCTCAGCCGGTC+TGG | 0.467544 | 3.1:+82405095 | MS.gene32809:CDS |
AATAACTTAGCCCTCTCAAT+TGG | 0.476467 | 3.1:-82401576 | None:intergenic |
TTGTATTATTCGTACTGTTA+GGG | 0.477702 | 3.1:+82401668 | MS.gene32809:CDS |
AAGAAGGTGTTATCTCTTTG+TGG | 0.477794 | 3.1:+82401691 | MS.gene32809:CDS |
ACCCGCCTTGCTGCTGACAT+TGG | 0.479408 | 3.1:+82404850 | MS.gene32809:CDS |
TTTGTTGCTGGAGCTGCAGC+AGG | 0.480970 | 3.1:+82404784 | MS.gene32809:CDS |
ACAATAGCACCCTCGACTGC+TGG | 0.481567 | 3.1:+82405184 | MS.gene32809:CDS |
CCACTATATTCCAGAAAGAC+GGG | 0.483157 | 3.1:+82404917 | MS.gene32809:CDS |
ACCATACCATGTAGTGATGC+AGG | 0.497343 | 3.1:-82404964 | None:intergenic |
GCAGTCTGGCATGGAACATC+CGG | 0.500996 | 3.1:+82405158 | MS.gene32809:CDS |
TTTCAACGCGATCTTATGGC+TGG | 0.502715 | 3.1:+82401516 | MS.gene32809:CDS |
TCCTGCATCACTACATGGTA+TGG | 0.515940 | 3.1:+82404963 | MS.gene32809:CDS |
CGCTTCCACAACGCCAACTC+AGG | 0.520701 | 3.1:-82405054 | None:intergenic |
GGTCTTCCTGCATCACTACA+TGG | 0.523489 | 3.1:+82404958 | MS.gene32809:CDS |
GCCTTGCTGCTGACATTGGA+AGG | 0.525002 | 3.1:+82404854 | MS.gene32809:CDS |
CACAGAGGTCTTTACTTCGG+AGG | 0.532931 | 3.1:+82404991 | MS.gene32809:CDS |
GAGAAATTGAGTGCAACAGA+AGG | 0.533707 | 3.1:-82401747 | None:intergenic |
GCCACTATATTCCAGAAAGA+CGG | 0.536387 | 3.1:+82404916 | MS.gene32809:CDS |
TTCCAGAAAGACGGGGTACG+GGG | 0.537972 | 3.1:+82404925 | MS.gene32809:CDS |
GCGGGTGTGTGCAATATCAA+GGG | 0.541293 | 3.1:-82404833 | None:intergenic |
GTGGTAGAAGAAAATTCAAA+GGG | 0.543264 | 3.1:+82401637 | MS.gene32809:CDS |
GGTCAAGAAATTTATGAACT+GGG | 0.543499 | 3.1:+82405311 | MS.gene32809:CDS |
TGAAGAATCTAAACCTGAGT+TGG | 0.544164 | 3.1:+82405041 | MS.gene32809:CDS |
ATGGCTGGTGCGGTGATGGG+TGG | 0.553337 | 3.1:+82401531 | MS.gene32809:CDS |
TGCTGCTGACATTGGAAGGA+CGG | 0.555913 | 3.1:+82404858 | MS.gene32809:CDS |
TGGTGCGGTGATGGGTGGTG+CGG | 0.558043 | 3.1:+82401536 | MS.gene32809:CDS |
AGTGGTAGAAGAAAATTCAA+AGG | 0.562791 | 3.1:+82401636 | MS.gene32809:CDS |
AAAAGCATATTAAGGGGTGG+AGG | 0.566280 | 3.1:+82404718 | MS.gene32809:CDS |
AGGTTGTACATCACTCATCT+TGG | 0.571908 | 3.1:+82404804 | MS.gene32809:CDS |
ATACGATACCAGACCGGCTG+AGG | 0.572285 | 3.1:-82405103 | None:intergenic |
CAAGCAGTTACAACCTCAGC+CGG | 0.572927 | 3.1:+82405090 | MS.gene32809:CDS |
AATGATGATGCAGTCTGGCA+TGG | 0.576929 | 3.1:+82405149 | MS.gene32809:CDS |
AGGAAAATCTATCGAACAGA+GGG | 0.577446 | 3.1:+82405207 | MS.gene32809:CDS |
CTAAGAAATGGTGAATGCCT+CGG | 0.578562 | 3.1:-82404894 | None:intergenic |
ACAGAGGTCTTTACTTCGGA+GGG | 0.582487 | 3.1:+82404992 | MS.gene32809:CDS |
CCCGTCTTTCTGGAATATAG+TGG | 0.589385 | 3.1:-82404917 | None:intergenic |
ATACACAGAGGTCTTTACTT+CGG | 0.599114 | 3.1:+82404988 | MS.gene32809:CDS |
AATTTGGCTATTGTTGCTAG+TGG | 0.601620 | 3.1:+82401618 | MS.gene32809:CDS |
TCCTTCCAATGTCAGCAGCA+AGG | 0.602029 | 3.1:-82404855 | None:intergenic |
TCCAGAAAGACGGGGTACGG+GGG | 0.606693 | 3.1:+82404926 | MS.gene32809:CDS |
CAATTGTGGCACCAATTGAG+AGG | 0.607857 | 3.1:+82401565 | MS.gene32809:CDS |
TACAAAAGCATATTAAGGGG+TGG | 0.608973 | 3.1:+82404715 | MS.gene32809:CDS |
GCGGCGAATTTAAGGATGAG+TGG | 0.609005 | 3.1:+82401417 | None:intergenic |
AGTTGGCGTTGTGGAAGCGA+TGG | 0.612266 | 3.1:+82405058 | MS.gene32809:CDS |
CTAAACCTGAGTTGGCGTTG+TGG | 0.612706 | 3.1:+82405049 | MS.gene32809:CDS |
GGCGTTGTGGAAGCGATGGA+TGG | 0.614379 | 3.1:+82405062 | MS.gene32809:CDS |
GGTGTTATCTCTTTGTGGCG+TGG | 0.614711 | 3.1:+82401696 | MS.gene32809:CDS |
TATCTTAGTCTTGTATGATG+AGG | 0.616581 | 3.1:+82405290 | MS.gene32809:CDS |
GTCAAGAAATTTATGAACTG+GGG | 0.624053 | 3.1:+82405312 | MS.gene32809:CDS |
ACGCGATCTTATGGCTGGTG+CGG | 0.629220 | 3.1:+82401521 | MS.gene32809:CDS |
ATAGCACCCTCGACTGCTGG+AGG | 0.632984 | 3.1:+82405187 | MS.gene32809:CDS |
CTTTACAAAAGCATATTAAG+GGG | 0.639364 | 3.1:+82404712 | MS.gene32809:CDS |
ACGGAAGTGCGTCAATTCCG+AGG | 0.643237 | 3.1:+82404877 | MS.gene32809:CDS |
AATTGTGGCACCAATTGAGA+GGG | 0.649550 | 3.1:+82401566 | MS.gene32809:CDS |
CGGGTGTGTGCAATATCAAG+GGG | 0.649657 | 3.1:-82404832 | None:intergenic |
CTCCGACGAACTGTGTCTAG+CGG | 0.655045 | 3.1:-82405126 | None:intergenic |
GAATTTAAGGATGAGTGGAG+AGG | 0.658027 | 3.1:+82401422 | None:intergenic |
TGGTGCGGTTCATACAATTG+TGG | 0.667762 | 3.1:+82401551 | MS.gene32809:CDS |
TCGAGGGTGCTATTGTACAC+CGG | 0.673149 | 3.1:-82405177 | None:intergenic |
TTCCAATGTCAGCAGCAAGG+CGG | 0.673559 | 3.1:-82404852 | None:intergenic |
ATCCGCTAGACACAGTTCGT+CGG | 0.677521 | 3.1:+82405124 | MS.gene32809:CDS |
CACTATATTCCAGAAAGACG+GGG | 0.686407 | 3.1:+82404918 | MS.gene32809:CDS |
GAGGAAAATCTATCGAACAG+AGG | 0.690051 | 3.1:+82405206 | MS.gene32809:CDS |
TAGCGGATACGATACCAGAC+CGG | 0.706446 | 3.1:-82405109 | None:intergenic |
ACACATTCGAAACTGCTCCG+CGG | 0.751998 | 3.1:-82405245 | None:intergenic |
CATGGTATGGTGATACACAG+AGG | 0.757473 | 3.1:+82404976 | MS.gene32809:CDS |
GGGTGTGTGCAATATCAAGG+GGG | 0.800764 | 3.1:-82404831 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATATATTATGAAAACATT+TGG | + | chr3.1:82401833-82401852 | MS.gene32809:intron | 10.0% |
!!! | TTTTATTTTATTTTACAAGA+TGG | + | chr3.1:82403182-82403201 | MS.gene32809:intron | 10.0% |
!! | CTTTAATCTTTATTATGAAA+TGG | + | chr3.1:82401786-82401805 | MS.gene32809:intron | 15.0% |
!!! | AATGCATTTTTAAATGAAAT+AGG | - | chr3.1:82403843-82403862 | None:intergenic | 15.0% |
!!! | ACTTTTATTGATGATATAAT+AGG | - | chr3.1:82403916-82403935 | None:intergenic | 15.0% |
!!! | ATTAATAACTTGCAATATTA+GGG | - | chr3.1:82401817-82401836 | None:intergenic | 15.0% |
!!! | ATTTGTATTAATTCCAATTT+TGG | + | chr3.1:82403941-82403960 | MS.gene32809:intron | 15.0% |
!!! | TAAAATTTCAGAATTTTTTC+TGG | + | chr3.1:82404225-82404244 | MS.gene32809:intron | 15.0% |
!!! | TATTAATAACTTGCAATATT+AGG | - | chr3.1:82401818-82401837 | None:intergenic | 15.0% |
!! | AAAAAAAACTATTAAGAGCT+CGG | - | chr3.1:82403025-82403044 | None:intergenic | 20.0% |
!! | AAAATAGAAAAATGACTTAC+AGG | - | chr3.1:82403317-82403336 | None:intergenic | 20.0% |
!! | AACAATAAACAAACACTAAA+TGG | - | chr3.1:82401980-82401999 | None:intergenic | 20.0% |
!! | AAGTATAGGAAAAGTAATAA+TGG | + | chr3.1:82403439-82403458 | MS.gene32809:intron | 20.0% |
!! | AGTTTCTATCACAAAATAAA+TGG | + | chr3.1:82403968-82403987 | MS.gene32809:intron | 20.0% |
!! | ATAAAAATGCTACTAAAATG+TGG | - | chr3.1:82404457-82404476 | None:intergenic | 20.0% |
!!! | AAATTTGACTTTTTTCTTCT+CGG | - | chr3.1:82403123-82403142 | None:intergenic | 20.0% |
!!! | ATCTTTACAAAAGCATATTA+AGG | + | chr3.1:82404710-82404729 | MS.gene32809:CDS | 20.0% |
!!! | ATTTATTTTGTGATAGAAAC+TGG | - | chr3.1:82403969-82403988 | None:intergenic | 20.0% |
!!! | TCTTTACAAAAGCATATTAA+GGG | + | chr3.1:82404711-82404730 | MS.gene32809:CDS | 20.0% |
! | AAAATAATCCGATCAAAACA+CGG | - | chr3.1:82402844-82402863 | None:intergenic | 25.0% |
! | AGGTTCATTTCATTATAACA+TGG | - | chr3.1:82404054-82404073 | None:intergenic | 25.0% |
! | ATGAACTCAAAGATGTAATA+AGG | + | chr3.1:82403655-82403674 | MS.gene32809:intron | 25.0% |
! | ATTAGTAATATTGTGACAGA+TGG | + | chr3.1:82404389-82404408 | MS.gene32809:intron | 25.0% |
! | ATTATCATAATAGATCCTCA+TGG | + | chr3.1:82402278-82402297 | MS.gene32809:intron | 25.0% |
! | ATTGTATTATTCGTACTGTT+AGG | + | chr3.1:82401667-82401686 | MS.gene32809:CDS | 25.0% |
! | CATACAAAACCATCATAAAA+GGG | - | chr3.1:82401890-82401909 | None:intergenic | 25.0% |
! | CTTCATTAAGAAAAGTCATT+AGG | + | chr3.1:82403728-82403747 | MS.gene32809:intron | 25.0% |
! | GATAATCAGGAATTATAATG+CGG | - | chr3.1:82402952-82402971 | None:intergenic | 25.0% |
! | TCAATTTGAGTGTTAAACTA+AGG | - | chr3.1:82404021-82404040 | None:intergenic | 25.0% |
! | TCATTTCATTATAACATGGA+TGG | - | chr3.1:82404050-82404069 | None:intergenic | 25.0% |
! | TGAACTCAAAGATGTAATAA+GGG | + | chr3.1:82403656-82403675 | MS.gene32809:intron | 25.0% |
! | TTACTACAAAAAGCAAGATA+TGG | + | chr3.1:82404337-82404356 | MS.gene32809:intron | 25.0% |
! | TTATAATGCGGACAAATAAA+AGG | - | chr3.1:82402940-82402959 | None:intergenic | 25.0% |
! | TTGTATTATTCGTACTGTTA+GGG | + | chr3.1:82401668-82401687 | MS.gene32809:CDS | 25.0% |
!! | AATATTCTAGAAGAACCTTA+TGG | + | chr3.1:82402740-82402759 | MS.gene32809:intron | 25.0% |
!! | AATCCTGATAATATTTTCTC+TGG | + | chr3.1:82404748-82404767 | MS.gene32809:CDS | 25.0% |
!! | ACTTAATCTACACCTTTTAA+TGG | + | chr3.1:82404104-82404123 | MS.gene32809:intron | 25.0% |
!! | ATATTCTAGAAGAACCTTAT+GGG | + | chr3.1:82402741-82402760 | MS.gene32809:intron | 25.0% |
!! | CTAATGACTTTTCTTAATGA+AGG | - | chr3.1:82403730-82403749 | None:intergenic | 25.0% |
!! | CTTAATCTACACCTTTTAAT+GGG | + | chr3.1:82404105-82404124 | MS.gene32809:intron | 25.0% |
!! | CTTTACAAAAGCATATTAAG+GGG | + | chr3.1:82404712-82404731 | MS.gene32809:CDS | 25.0% |
!! | TTAGTTTACCATACTGTTTT+TGG | + | chr3.1:82403884-82403903 | MS.gene32809:intron | 25.0% |
!! | TTGAAATTTGCTTACGTAAA+AGG | + | chr3.1:82404169-82404188 | MS.gene32809:intron | 25.0% |
!! | TTTAGGATTGACTATTGATT+GGG | + | chr3.1:82403758-82403777 | MS.gene32809:intron | 25.0% |
!!! | AGTCATTAGGCATTTATTTT+AGG | + | chr3.1:82403741-82403760 | MS.gene32809:intron | 25.0% |
!!! | CGCTCTTTTAATTTAAAAGA+AGG | - | chr3.1:82404074-82404093 | None:intergenic | 25.0% |
!!! | TCAAAGCTTTTTTTTCTTCT+GGG | - | chr3.1:82401455-82401474 | None:intergenic | 25.0% |
!!! | TTCAAAGCTTTTTTTTCTTC+TGG | - | chr3.1:82401456-82401475 | None:intergenic | 25.0% |
!!! | TTTTAGGATTGACTATTGAT+TGG | + | chr3.1:82403757-82403776 | MS.gene32809:intron | 25.0% |
AAAAAGCAAGATATGGATGT+TGG | + | chr3.1:82404344-82404363 | MS.gene32809:intron | 30.0% | |
AAAATAAAAAAACTGCAGCC+TGG | - | chr3.1:82403171-82403190 | None:intergenic | 30.0% | |
AAATAATCCGATCAAAACAC+GGG | - | chr3.1:82402843-82402862 | None:intergenic | 30.0% | |
AACCAAATGTCTCCAAATAA+TGG | - | chr3.1:82402079-82402098 | None:intergenic | 30.0% | |
AGGTCAAGAAATTTATGAAC+TGG | + | chr3.1:82405310-82405329 | MS.gene32809:CDS | 30.0% | |
AGTGGTAGAAGAAAATTCAA+AGG | + | chr3.1:82401636-82401655 | MS.gene32809:CDS | 30.0% | |
ATAGAAACTGGTACCAAAAT+TGG | - | chr3.1:82403957-82403976 | None:intergenic | 30.0% | |
ATCAACATAGGCTAAAACTT+TGG | + | chr3.1:82404496-82404515 | MS.gene32809:intron | 30.0% | |
ATGGAAAACAAATTTCTGCA+CGG | + | chr3.1:82404408-82404427 | MS.gene32809:intron | 30.0% | |
ATGTACATCAACTTCTTACT+AGG | + | chr3.1:82403620-82403639 | MS.gene32809:intron | 30.0% | |
CAAGAACATAACCAAAGAAA+AGG | - | chr3.1:82403291-82403310 | None:intergenic | 30.0% | |
CAATATATAATCGTACCATG+AGG | - | chr3.1:82402296-82402315 | None:intergenic | 30.0% | |
CCATACAAAACCATCATAAA+AGG | - | chr3.1:82401891-82401910 | None:intergenic | 30.0% | |
GAAAAAACATCATTGAACAC+AGG | - | chr3.1:82401861-82401880 | None:intergenic | 30.0% | |
GGTCAAGAAATTTATGAACT+GGG | + | chr3.1:82405311-82405330 | MS.gene32809:CDS | 30.0% | |
GTATTTGTAAGAAACTAGCA+TGG | + | chr3.1:82402003-82402022 | MS.gene32809:intron | 30.0% | |
GTCAAGAAATTTATGAACTG+GGG | + | chr3.1:82405312-82405331 | MS.gene32809:CDS | 30.0% | |
GTCACAATATTACTAATGCA+TGG | - | chr3.1:82404386-82404405 | None:intergenic | 30.0% | |
GTGGTAGAAGAAAATTCAAA+GGG | + | chr3.1:82401637-82401656 | MS.gene32809:CDS | 30.0% | |
TAGAGAGAGAAAAGATAATC+AGG | - | chr3.1:82402965-82402984 | None:intergenic | 30.0% | |
TCAACATAGGCTAAAACTTT+GGG | + | chr3.1:82404497-82404516 | MS.gene32809:intron | 30.0% | |
TGTACATCAACTTCTTACTA+GGG | + | chr3.1:82403621-82403640 | MS.gene32809:intron | 30.0% | |
TTTGTCATCTCATGAAAACT+GGG | + | chr3.1:82402098-82402117 | MS.gene32809:intron | 30.0% | |
! | AACAAGAGAGTAAGAAGTAT+AGG | + | chr3.1:82403425-82403444 | MS.gene32809:intron | 30.0% |
! | ATGCTACTAAAATGTGGTTT+TGG | - | chr3.1:82404451-82404470 | None:intergenic | 30.0% |
! | CAGCAAGTGAAATTTTGTAT+TGG | - | chr3.1:82402898-82402917 | None:intergenic | 30.0% |
! | GTAATTTGCAAGTATTATCC+AGG | + | chr3.1:82403150-82403169 | MS.gene32809:intron | 30.0% |
! | TATTCTAGAAGAACCTTATG+GGG | + | chr3.1:82402742-82402761 | MS.gene32809:intron | 30.0% |
! | TTACCCATCCATTTTCTTTA+GGG | + | chr3.1:82402343-82402362 | MS.gene32809:intron | 30.0% |
! | TTCAGACAACATCTCTTTTA+TGG | - | chr3.1:82405025-82405044 | None:intergenic | 30.0% |
! | TTCCTTTTTCTCCCATTAAA+AGG | - | chr3.1:82404119-82404138 | None:intergenic | 30.0% |
! | TTCTTACTCTCTTGTTTACA+GGG | - | chr3.1:82403421-82403440 | None:intergenic | 30.0% |
! | TTGCTGTTAAATTCACTCAA+GGG | + | chr3.1:82402912-82402931 | MS.gene32809:intron | 30.0% |
! | TTTACCCATCCATTTTCTTT+AGG | + | chr3.1:82402342-82402361 | MS.gene32809:intron | 30.0% |
! | TTTTCCTTTTTCTCATTCTC+TGG | + | chr3.1:82403861-82403880 | MS.gene32809:intron | 30.0% |
! | TTTTGTCATCTCATGAAAAC+TGG | + | chr3.1:82402097-82402116 | MS.gene32809:intron | 30.0% |
! | TTTTTATGTCCAGAAGATGA+TGG | + | chr3.1:82404470-82404489 | MS.gene32809:intron | 30.0% |
!! | AAGCTCTCTAATTTTTGGAA+GGG | + | chr3.1:82403788-82403807 | MS.gene32809:intron | 30.0% |
!! | AGATGATGGAATATCAACAT+AGG | + | chr3.1:82404484-82404503 | MS.gene32809:intron | 30.0% |
!! | ATAAGGGCATAACTCAATTT+TGG | + | chr3.1:82403672-82403691 | MS.gene32809:intron | 30.0% |
!! | TAAGGGCATAACTCAATTTT+GGG | + | chr3.1:82403673-82403692 | MS.gene32809:intron | 30.0% |
!! | TATCTTAGTCTTGTATGATG+AGG | + | chr3.1:82405290-82405309 | MS.gene32809:CDS | 30.0% |
!!! | CCTTTTATGATGGTTTTGTA+TGG | + | chr3.1:82401888-82401907 | MS.gene32809:intron | 30.0% |
!!! | GTGTTTTGATCGGATTATTT+TGG | + | chr3.1:82402843-82402862 | MS.gene32809:intron | 30.0% |
!!! | TCAGAATTTTTTCTGGCTAA+CGG | + | chr3.1:82404232-82404251 | MS.gene32809:intron | 30.0% |
AAACTATTAAGAGCTCGGAA+TGG | - | chr3.1:82403020-82403039 | None:intergenic | 35.0% | |
AAAGGTCAGATTTCGGTATA+GGG | - | chr3.1:82403397-82403416 | None:intergenic | 35.0% | |
AAGAAAATGGATGGGTAAAC+TGG | - | chr3.1:82402341-82402360 | None:intergenic | 35.0% | |
AAGAGGAACCCTAAAGAAAA+TGG | - | chr3.1:82402354-82402373 | None:intergenic | 35.0% | |
AAGGGCTTGATATATAAGGA+GGG | - | chr3.1:82402513-82402532 | None:intergenic | 35.0% | |
AATAACTTAGCCCTCTCAAT+TGG | - | chr3.1:82401579-82401598 | None:intergenic | 35.0% | |
AATCCAGAGGATTATAATGG+AGG | + | chr3.1:82402704-82402723 | MS.gene32809:intron | 35.0% | |
AATTTGGCTATTGTTGCTAG+TGG | + | chr3.1:82401618-82401637 | MS.gene32809:CDS | 35.0% | |
ACAAAACCATCATAAAAGGG+TGG | - | chr3.1:82401887-82401906 | None:intergenic | 35.0% | |
ACCCAAGACTCTAATTTCTT+GGG | + | chr3.1:82403815-82403834 | MS.gene32809:intron | 35.0% | |
AGGAAAATCTATCGAACAGA+GGG | + | chr3.1:82405207-82405226 | MS.gene32809:CDS | 35.0% | |
ATACACAGAGGTCTTTACTT+CGG | + | chr3.1:82404988-82405007 | MS.gene32809:CDS | 35.0% | |
ATGTTGGCATCATTCTCATA+AGG | + | chr3.1:82404360-82404379 | MS.gene32809:intron | 35.0% | |
CAAAACCATCATAAAAGGGT+GGG | - | chr3.1:82401886-82401905 | None:intergenic | 35.0% | |
CACCATTATTTGGAGACATT+TGG | + | chr3.1:82402074-82402093 | MS.gene32809:intron | 35.0% | |
CCTTATATATCAAGCCCTTA+GGG | + | chr3.1:82402514-82402533 | MS.gene32809:intron | 35.0% | |
CTAACCAGAGAATGAGAAAA+AGG | - | chr3.1:82403868-82403887 | None:intergenic | 35.0% | |
CTGAATCCAGAGGATTATAA+TGG | + | chr3.1:82402701-82402720 | MS.gene32809:intron | 35.0% | |
CTGTAACAAGCACCATTATT+TGG | + | chr3.1:82402064-82402083 | MS.gene32809:intron | 35.0% | |
CTTCCAAAAATTAGAGAGCT+TGG | - | chr3.1:82403789-82403808 | None:intergenic | 35.0% | |
CTTGTTCTTCATTACTCTTC+TGG | + | chr3.1:82402569-82402588 | MS.gene32809:intron | 35.0% | |
GAACCCTAAAGAAAATGGAT+GGG | - | chr3.1:82402349-82402368 | None:intergenic | 35.0% | |
GATATCAAGCCAGTCAAAAA+TGG | - | chr3.1:82401943-82401962 | None:intergenic | 35.0% | |
GCAGAACAACATCAAGAAAT+AGG | - | chr3.1:82404581-82404600 | None:intergenic | 35.0% | |
GCAGACACAAGAAAGTAATT+TGG | + | chr3.1:82401602-82401621 | MS.gene32809:CDS | 35.0% | |
GCTCCAGAGAAAATATTATC+AGG | - | chr3.1:82404754-82404773 | None:intergenic | 35.0% | |
GGAATATAGTGGCTAAGAAA+TGG | - | chr3.1:82404909-82404928 | None:intergenic | 35.0% | |
GGATTACACCAAAAACAGTA+TGG | - | chr3.1:82403895-82403914 | None:intergenic | 35.0% | |
GTTGATATTCCATCATCTTC+TGG | - | chr3.1:82404482-82404501 | None:intergenic | 35.0% | |
TAAGGGCTTGATATATAAGG+AGG | - | chr3.1:82402514-82402533 | None:intergenic | 35.0% | |
TATATTGTTTGCATACGCCA+CGG | + | chr3.1:82402309-82402328 | MS.gene32809:intron | 35.0% | |
TATCTTCTTGCCTTTATGTG+TGG | + | chr3.1:82402632-82402651 | MS.gene32809:intron | 35.0% | |
TCCCAAGAAATTAGAGTCTT+GGG | - | chr3.1:82403819-82403838 | None:intergenic | 35.0% | |
TCCTTATATATCAAGCCCTT+AGG | + | chr3.1:82402513-82402532 | MS.gene32809:intron | 35.0% | |
TGAAGAATCTAAACCTGAGT+TGG | + | chr3.1:82405041-82405060 | MS.gene32809:CDS | 35.0% | |
TGCACTCAATTTCTCTCTTA+AGG | + | chr3.1:82401755-82401774 | MS.gene32809:CDS | 35.0% | |
TTCCCAAGAAATTAGAGTCT+TGG | - | chr3.1:82403820-82403839 | None:intergenic | 35.0% | |
TTTGTGCAAATAATCCCACT+TGG | + | chr3.1:82403469-82403488 | MS.gene32809:intron | 35.0% | |
! | AGACCAAGCTCTCTAATTTT+TGG | + | chr3.1:82403783-82403802 | MS.gene32809:intron | 35.0% |
! | ATCCAGAGGATTATAATGGA+GGG | + | chr3.1:82402705-82402724 | MS.gene32809:intron | 35.0% |
! | CAATTTTCAACGCGATCTTA+TGG | + | chr3.1:82401512-82401531 | MS.gene32809:CDS | 35.0% |
! | CACCTTTTAATGGGAGAAAA+AGG | + | chr3.1:82404114-82404133 | MS.gene32809:intron | 35.0% |
! | CTTCTTACTCTCTTGTTTAC+AGG | - | chr3.1:82403422-82403441 | None:intergenic | 35.0% |
! | TACAAAAGCATATTAAGGGG+TGG | + | chr3.1:82404715-82404734 | MS.gene32809:CDS | 35.0% |
! | TCCTTTTAGCCTGAAACAAA+CGG | + | chr3.1:82403545-82403564 | MS.gene32809:intron | 35.0% |
!! | AAGAAGGTGTTATCTCTTTG+TGG | + | chr3.1:82401691-82401710 | MS.gene32809:CDS | 35.0% |
!! | ATTGCTGATCCATTTTTGAC+TGG | + | chr3.1:82401931-82401950 | MS.gene32809:intron | 35.0% |
!! | CAAGCTCTCTAATTTTTGGA+AGG | + | chr3.1:82403787-82403806 | MS.gene32809:intron | 35.0% |
!! | CTTGCTGTTAAATTCACTCA+AGG | + | chr3.1:82402911-82402930 | MS.gene32809:intron | 35.0% |
!! | GAAGTTGATGTACATTTGAG+AGG | - | chr3.1:82403615-82403634 | None:intergenic | 35.0% |
!!! | ACTTTTTTCTTCTCGGACAT+AGG | - | chr3.1:82403116-82403135 | None:intergenic | 35.0% |
!!! | CTATCTCGTGTTTTTTCAAC+AGG | + | chr3.1:82404687-82404706 | MS.gene32809:intron | 35.0% |
AAAAAGGAACTGATGCATCG+TGG | + | chr3.1:82404130-82404149 | MS.gene32809:intron | 40.0% | |
AAAAGGAACTGATGCATCGT+GGG | + | chr3.1:82404131-82404150 | MS.gene32809:intron | 40.0% | |
AAAGGACTTTGCATCATGGA+AGG | - | chr3.1:82403531-82403550 | None:intergenic | 40.0% | |
AATTGTGGCACCAATTGAGA+GGG | + | chr3.1:82401566-82401585 | MS.gene32809:CDS | 40.0% | |
ACTCAGAAAGAACCCTTCAA+CGG | + | chr3.1:82402239-82402258 | MS.gene32809:intron | 40.0% | |
ACTGAGGATGAATCGCTAAT+AGG | - | chr3.1:82402768-82402787 | None:intergenic | 40.0% | |
ACTTCATGGCATCACAAGTA+TGG | - | chr3.1:82402801-82402820 | None:intergenic | 40.0% | |
AGAAACAGTAGGTGGATACT+TGG | + | chr3.1:82402403-82402422 | MS.gene32809:intron | 40.0% | |
AGCATTGCAATTCTAACAGC+AGG | - | chr3.1:82403340-82403359 | None:intergenic | 40.0% | |
AGCTTATGCAATACTCCCTA+AGG | - | chr3.1:82402532-82402551 | None:intergenic | 40.0% | |
AGGTTGTACATCACTCATCT+TGG | + | chr3.1:82404804-82404823 | MS.gene32809:CDS | 40.0% | |
ATAAGGGATGGAACACTACT+AGG | - | chr3.1:82403078-82403097 | None:intergenic | 40.0% | |
ATAGGAAAATGCACCGTAGA+AGG | + | chr3.1:82402379-82402398 | MS.gene32809:intron | 40.0% | |
ATCCCTCCATTATAATCCTC+TGG | - | chr3.1:82402710-82402729 | None:intergenic | 40.0% | |
ATGCAGGCAATGTTGAAAAC+TGG | + | chr3.1:82402121-82402140 | MS.gene32809:intron | 40.0% | |
ATTCGTACTGTTAGGGAAGA+AGG | + | chr3.1:82401675-82401694 | MS.gene32809:CDS | 40.0% | |
CAAAGGTCAGATTTCGGTAT+AGG | - | chr3.1:82403398-82403417 | None:intergenic | 40.0% | |
CACTATATTCCAGAAAGACG+GGG | + | chr3.1:82404918-82404937 | MS.gene32809:CDS | 40.0% | |
CCACTATATTCCAGAAAGAC+GGG | + | chr3.1:82404917-82404936 | MS.gene32809:CDS | 40.0% | |
CCCTAAGGGCTTGATATATA+AGG | - | chr3.1:82402517-82402536 | None:intergenic | 40.0% | |
CTAAGAAATGGTGAATGCCT+CGG | - | chr3.1:82404897-82404916 | None:intergenic | 40.0% | |
CTTCATGGCATCACAAGTAT+GGG | - | chr3.1:82402800-82402819 | None:intergenic | 40.0% | |
CTTTAGCCCTTTCACTGATA+GGG | + | chr3.1:82403259-82403278 | MS.gene32809:intron | 40.0% | |
GAATCTAAAAGGGTTGTGGA+TGG | + | chr3.1:82402604-82402623 | MS.gene32809:intron | 40.0% | |
GACCCAAGACTCTAATTTCT+TGG | + | chr3.1:82403814-82403833 | MS.gene32809:intron | 40.0% | |
GAGAAATTGAGTGCAACAGA+AGG | - | chr3.1:82401750-82401769 | None:intergenic | 40.0% | |
GAGCAGTTTCGAATGTGTTT+AGG | + | chr3.1:82405250-82405269 | MS.gene32809:CDS | 40.0% | |
GAGGAAAATCTATCGAACAG+AGG | + | chr3.1:82405206-82405225 | MS.gene32809:CDS | 40.0% | |
GCCACTATATTCCAGAAAGA+CGG | + | chr3.1:82404916-82404935 | MS.gene32809:CDS | 40.0% | |
GCTAAAAGGACTTTGCATCA+TGG | - | chr3.1:82403535-82403554 | None:intergenic | 40.0% | |
GCTTATGCAATACTCCCTAA+GGG | - | chr3.1:82402531-82402550 | None:intergenic | 40.0% | |
GGAACCCTAAAGAAAATGGA+TGG | - | chr3.1:82402350-82402369 | None:intergenic | 40.0% | |
GTACCAGGGAGAAGTAATAA+GGG | - | chr3.1:82403094-82403113 | None:intergenic | 40.0% | |
TAGAAGGTAGAAACAGTAGG+TGG | + | chr3.1:82402395-82402414 | MS.gene32809:intron | 40.0% | |
TTTAGCCCTTTCACTGATAG+GGG | + | chr3.1:82403260-82403279 | MS.gene32809:intron | 40.0% | |
TTTCGGTATAGGGATGAAGA+AGG | - | chr3.1:82403387-82403406 | None:intergenic | 40.0% | |
! | AAAAGCATATTAAGGGGTGG+AGG | + | chr3.1:82404718-82404737 | MS.gene32809:CDS | 40.0% |
! | ACAACCCTTTTAGATTCTGG+GGG | - | chr3.1:82402601-82402620 | None:intergenic | 40.0% |
! | CACAACCCTTTTAGATTCTG+GGG | - | chr3.1:82402602-82402621 | None:intergenic | 40.0% |
! | CCACAACCCTTTTAGATTCT+GGG | - | chr3.1:82402603-82402622 | None:intergenic | 40.0% |
! | CCTTTTAGCCTGAAACAAAC+GGG | + | chr3.1:82403546-82403565 | MS.gene32809:intron | 40.0% |
! | GCATCAGCTAATTTTGTTGC+TGG | + | chr3.1:82404772-82404791 | MS.gene32809:CDS | 40.0% |
! | GCATTGACATAGATCAGTTG+CGG | - | chr3.1:82404559-82404578 | None:intergenic | 40.0% |
! | TCCACAACCCTTTTAGATTC+TGG | - | chr3.1:82402604-82402623 | None:intergenic | 40.0% |
! | TTCTTCCCACCCTTTTATGA+TGG | + | chr3.1:82401878-82401897 | MS.gene32809:intron | 40.0% |
!! | AAACAGAGCACTTTTCAGTC+AGG | + | chr3.1:82404192-82404211 | MS.gene32809:intron | 40.0% |
!! | CCTACTGTTTCTACCTTCTA+CGG | - | chr3.1:82402395-82402414 | None:intergenic | 40.0% |
!! | GGATTGATTTCGTTTTACCG+CGG | + | chr3.1:82405228-82405247 | MS.gene32809:CDS | 40.0% |
!! | TACTCTGAAACTGAATCCAG+AGG | + | chr3.1:82402691-82402710 | MS.gene32809:intron | 40.0% |
AAAGAACCCTTCAACGGATG+TGG | + | chr3.1:82402245-82402264 | MS.gene32809:intron | 45.0% | |
AACTAGCATGGCTTGAGAAG+AGG | + | chr3.1:82402015-82402034 | MS.gene32809:intron | 45.0% | |
AAGTCCCCCTATCAGTGAAA+GGG | - | chr3.1:82403268-82403287 | None:intergenic | 45.0% | |
AATCGCTAATAGGCCCCATA+AGG | - | chr3.1:82402758-82402777 | None:intergenic | 45.0% | |
ACAGAGGTCTTTACTTCGGA+GGG | + | chr3.1:82404992-82405011 | MS.gene32809:CDS | 45.0% | |
ACAGGGCAAAGGTCAGATTT+CGG | - | chr3.1:82403404-82403423 | None:intergenic | 45.0% | |
ACATCTTCCACATCCGTTGA+AGG | - | chr3.1:82402255-82402274 | None:intergenic | 45.0% | |
ACCATACCATGTAGTGATGC+AGG | - | chr3.1:82404967-82404986 | None:intergenic | 45.0% | |
ACTAGCATGGCTTGAGAAGA+GGG | + | chr3.1:82402016-82402035 | MS.gene32809:intron | 45.0% | |
ACTTGTGATGCCATGAAGTG+AGG | + | chr3.1:82402802-82402821 | MS.gene32809:intron | 45.0% | |
AGCCTTGAAATCACTCCAAG+TGG | - | chr3.1:82403487-82403506 | None:intergenic | 45.0% | |
ATCTCTTTGTGGCGTGGTAA+TGG | + | chr3.1:82401702-82401721 | MS.gene32809:CDS | 45.0% | |
ATGGCATCACAAGTATGGGA+TGG | - | chr3.1:82402796-82402815 | None:intergenic | 45.0% | |
CAATTGTGGCACCAATTGAG+AGG | + | chr3.1:82401565-82401584 | MS.gene32809:CDS | 45.0% | |
CAGGGAGAAGTAATAAGGGA+TGG | - | chr3.1:82403090-82403109 | None:intergenic | 45.0% | |
CAGTAGGTGGATACTTGGAA+AGG | + | chr3.1:82402408-82402427 | MS.gene32809:intron | 45.0% | |
CATCCCTTATTACTTCTCCC+TGG | + | chr3.1:82403088-82403107 | MS.gene32809:intron | 45.0% | |
CATCTTCCACATCCGTTGAA+GGG | - | chr3.1:82402254-82402273 | None:intergenic | 45.0% | |
CATGGTATGGTGATACACAG+AGG | + | chr3.1:82404976-82404995 | MS.gene32809:CDS | 45.0% | |
CCCAGAATCTAAAAGGGTTG+TGG | + | chr3.1:82402600-82402619 | MS.gene32809:intron | 45.0% | |
CCCGTTTGTTTCAGGCTAAA+AGG | - | chr3.1:82403549-82403568 | None:intergenic | 45.0% | |
CCGTAGAAGGTAGAAACAGT+AGG | + | chr3.1:82402392-82402411 | MS.gene32809:intron | 45.0% | |
CCTATCAGTGAAAGGGCTAA+AGG | - | chr3.1:82403261-82403280 | None:intergenic | 45.0% | |
CCTTTAGCCCTTTCACTGAT+AGG | + | chr3.1:82403258-82403277 | MS.gene32809:intron | 45.0% | |
CGGTGATTGTCACACAATCA+CGG | - | chr3.1:82402664-82402683 | None:intergenic | 45.0% | |
CGTGATTGTGTGACAATCAC+CGG | + | chr3.1:82402662-82402681 | MS.gene32809:intron | 45.0% | |
CTTGTGATGCCATGAAGTGA+GGG | + | chr3.1:82402803-82402822 | MS.gene32809:intron | 45.0% | |
GCACGGAAGTTTGTGAAATG+TGG | + | chr3.1:82404425-82404444 | MS.gene32809:intron | 45.0% | |
GCATCCCCCAGAATCTAAAA+GGG | + | chr3.1:82402594-82402613 | MS.gene32809:intron | 45.0% | |
GCCTTGAAATCACTCCAAGT+GGG | - | chr3.1:82403486-82403505 | None:intergenic | 45.0% | |
GGGCAATTTGAATTGTGTGC+TGG | + | chr3.1:82403588-82403607 | MS.gene32809:intron | 45.0% | |
GGTACCAGGGAGAAGTAATA+AGG | - | chr3.1:82403095-82403114 | None:intergenic | 45.0% | |
GGTTGTGTATGCTGTCAACT+AGG | + | chr3.1:82402142-82402161 | MS.gene32809:intron | 45.0% | |
GTGATTGTGTGACAATCACC+GGG | + | chr3.1:82402663-82402682 | MS.gene32809:intron | 45.0% | |
TATTCCAGAAAGACGGGGTA+CGG | + | chr3.1:82404923-82404942 | MS.gene32809:CDS | 45.0% | |
TCCCACTTGGAGTGATTTCA+AGG | + | chr3.1:82403482-82403501 | MS.gene32809:intron | 45.0% | |
TCCGACGCTCAAGTCAATTA+GGG | + | chr3.1:82402434-82402453 | MS.gene32809:intron | 45.0% | |
TCCTGCATCACTACATGGTA+TGG | + | chr3.1:82404963-82404982 | MS.gene32809:CDS | 45.0% | |
TCTAAAAGGGTTGTGGATGG+TGG | + | chr3.1:82402607-82402626 | MS.gene32809:intron | 45.0% | |
TCTCATGAAAACTGGGATGC+AGG | + | chr3.1:82402105-82402124 | MS.gene32809:intron | 45.0% | |
TCTCTTTGTGGCGTGGTAAT+GGG | + | chr3.1:82401703-82401722 | MS.gene32809:CDS | 45.0% | |
TGATTGTGTGACAATCACCG+GGG | + | chr3.1:82402664-82402683 | MS.gene32809:intron | 45.0% | |
TGCATCCCCCAGAATCTAAA+AGG | + | chr3.1:82402593-82402612 | MS.gene32809:intron | 45.0% | |
TGGCATCACAAGTATGGGAT+GGG | - | chr3.1:82402795-82402814 | None:intergenic | 45.0% | |
TGGTGCGGTTCATACAATTG+TGG | + | chr3.1:82401551-82401570 | MS.gene32809:CDS | 45.0% | |
TTAGCCCTTTCACTGATAGG+GGG | + | chr3.1:82403261-82403280 | MS.gene32809:intron | 45.0% | |
TTTCAACGCGATCTTATGGC+TGG | + | chr3.1:82401516-82401535 | MS.gene32809:CDS | 45.0% | |
! | AATGATGATGCAGTCTGGCA+TGG | + | chr3.1:82405149-82405168 | MS.gene32809:CDS | 45.0% |
! | CAGTTTCAGAGTATCTTCCC+CGG | - | chr3.1:82402684-82402703 | None:intergenic | 45.0% |
! | CTCTCTTGTTTACAGGGCAA+AGG | - | chr3.1:82403415-82403434 | None:intergenic | 45.0% |
! | GCATTTTCCTATCGAGGAAG+AGG | - | chr3.1:82402371-82402390 | None:intergenic | 45.0% |
! | GCTTTAGTTCCCTCACTTCA+TGG | - | chr3.1:82402815-82402834 | None:intergenic | 45.0% |
! | TACGGTGCATTTTCCTATCG+AGG | - | chr3.1:82402377-82402396 | None:intergenic | 45.0% |
! | TAGGGGGACTTCCTTTTCTT+TGG | + | chr3.1:82403277-82403296 | MS.gene32809:intron | 45.0% |
! | TCGAATGTGTTTAGGAGCAC+TGG | + | chr3.1:82405258-82405277 | MS.gene32809:CDS | 45.0% |
!! | ACCCTAATTGACTTGAGCGT+CGG | - | chr3.1:82402438-82402457 | None:intergenic | 45.0% |
!! | AGAGCACTTTTCAGTCAGGT+GGG | + | chr3.1:82404196-82404215 | MS.gene32809:intron | 45.0% |
!! | CCCGTCTTTCTGGAATATAG+TGG | - | chr3.1:82404920-82404939 | None:intergenic | 45.0% |
ACACATTCGAAACTGCTCCG+CGG | - | chr3.1:82405248-82405267 | None:intergenic | 50.0% | |
ACCAGTCGTCGCAACTATCA+TGG | + | chr3.1:82403697-82403716 | MS.gene32809:intron | 50.0% | |
AGAAGAGGGATGACGAGAGT+TGG | + | chr3.1:82402030-82402049 | MS.gene32809:intron | 50.0% | |
ATCCGATCAAAACACGGGTC+AGG | - | chr3.1:82402838-82402857 | None:intergenic | 50.0% | |
ATCCGCTAGACACAGTTCGT+CGG | + | chr3.1:82405124-82405143 | MS.gene32809:CDS | 50.0% | |
ATTCCAGAAAGACGGGGTAC+GGG | + | chr3.1:82404924-82404943 | MS.gene32809:CDS | 50.0% | |
CAAGCAGTTACAACCTCAGC+CGG | + | chr3.1:82405090-82405109 | MS.gene32809:CDS | 50.0% | |
CACAGAGGTCTTTACTTCGG+AGG | + | chr3.1:82404991-82405010 | MS.gene32809:CDS | 50.0% | |
CGGGTGTGTGCAATATCAAG+GGG | - | chr3.1:82404835-82404854 | None:intergenic | 50.0% | |
CTCCGACGCTCAAGTCAATT+AGG | + | chr3.1:82402433-82402452 | MS.gene32809:intron | 50.0% | |
CTTCTCGGACATAGGTACCA+GGG | - | chr3.1:82403108-82403127 | None:intergenic | 50.0% | |
GAAGTCCCCCTATCAGTGAA+AGG | - | chr3.1:82403269-82403288 | None:intergenic | 50.0% | |
GCGGGTGTGTGCAATATCAA+GGG | - | chr3.1:82404836-82404855 | None:intergenic | 50.0% | |
GCTCGGAATGGTGAACTTGA+TGG | - | chr3.1:82403008-82403027 | None:intergenic | 50.0% | |
GGATGGAACACTACTAGGCA+AGG | - | chr3.1:82403073-82403092 | None:intergenic | 50.0% | |
GGGTGTGTGCAATATCAAGG+GGG | - | chr3.1:82404834-82404853 | None:intergenic | 50.0% | |
GGTCTTCCTGCATCACTACA+TGG | + | chr3.1:82404958-82404977 | MS.gene32809:CDS | 50.0% | |
TAGCCTGAAACAAACGGGCA+GGG | + | chr3.1:82403551-82403570 | MS.gene32809:intron | 50.0% | |
TAGGGTTCCTCTTCCTCGAT+AGG | + | chr3.1:82402361-82402380 | MS.gene32809:intron | 50.0% | |
TCCATGATAGTTGCGACGAC+TGG | - | chr3.1:82403701-82403720 | None:intergenic | 50.0% | |
TCCGATCAAAACACGGGTCA+GGG | - | chr3.1:82402837-82402856 | None:intergenic | 50.0% | |
TCCTTCCAATGTCAGCAGCA+AGG | - | chr3.1:82404858-82404877 | None:intergenic | 50.0% | |
TCTTCTCGGACATAGGTACC+AGG | - | chr3.1:82403109-82403128 | None:intergenic | 50.0% | |
TGCTGCTGACATTGGAAGGA+CGG | + | chr3.1:82404858-82404877 | MS.gene32809:CDS | 50.0% | |
TTAGCCTGAAACAAACGGGC+AGG | + | chr3.1:82403550-82403569 | MS.gene32809:intron | 50.0% | |
TTCCAATGTCAGCAGCAAGG+CGG | - | chr3.1:82404855-82404874 | None:intergenic | 50.0% | |
TTGTCACACAATCACGGCCA+CGG | - | chr3.1:82402658-82402677 | None:intergenic | 50.0% | |
! | AGATTTTCCTCCAGCAGTCG+AGG | - | chr3.1:82405197-82405216 | None:intergenic | 50.0% |
! | CGGAGAATGATGATGCAGTC+TGG | + | chr3.1:82405144-82405163 | MS.gene32809:CDS | 50.0% |
! | CTAAACCTGAGTTGGCGTTG+TGG | + | chr3.1:82405049-82405068 | MS.gene32809:CDS | 50.0% |
! | GATTTTCCTCCAGCAGTCGA+GGG | - | chr3.1:82405196-82405215 | None:intergenic | 50.0% |
! | GGTGTTATCTCTTTGTGGCG+TGG | + | chr3.1:82401696-82401715 | MS.gene32809:CDS | 50.0% |
! | TAGCGGATACGATACCAGAC+CGG | - | chr3.1:82405112-82405131 | None:intergenic | 50.0% |
!! | CAGAGCACTTTTCAGTCAGG+TGG | + | chr3.1:82404195-82404214 | MS.gene32809:intron | 50.0% |
!! | TCGAGGGTGCTATTGTACAC+CGG | - | chr3.1:82405180-82405199 | None:intergenic | 50.0% |
ACAATAGCACCCTCGACTGC+TGG | + | chr3.1:82405184-82405203 | MS.gene32809:CDS | 55.0% | |
ACGCGATCTTATGGCTGGTG+CGG | + | chr3.1:82401521-82401540 | MS.gene32809:CDS | 55.0% | |
AGTTACAACCTCAGCCGGTC+TGG | + | chr3.1:82405095-82405114 | MS.gene32809:CDS | 55.0% | |
AGTTGGCGTTGTGGAAGCGA+TGG | + | chr3.1:82405058-82405077 | MS.gene32809:CDS | 55.0% | |
ATACGATACCAGACCGGCTG+AGG | - | chr3.1:82405106-82405125 | None:intergenic | 55.0% | |
CTCCGACGAACTGTGTCTAG+CGG | - | chr3.1:82405129-82405148 | None:intergenic | 55.0% | |
CTTATGGCTGGTGCGGTGAT+GGG | + | chr3.1:82401528-82401547 | MS.gene32809:CDS | 55.0% | |
CTTGCCTTTATGTGTGGCCG+TGG | + | chr3.1:82402638-82402657 | MS.gene32809:intron | 55.0% | |
GAACTGATGCATCGTGGGCT+AGG | + | chr3.1:82404136-82404155 | MS.gene32809:intron | 55.0% | |
GCAGGGAGGAAGAATACTGG+GGG | + | chr3.1:82403568-82403587 | MS.gene32809:intron | 55.0% | |
GCAGTCTGGCATGGAACATC+CGG | + | chr3.1:82405158-82405177 | MS.gene32809:CDS | 55.0% | |
GCCTTGCTGCTGACATTGGA+AGG | + | chr3.1:82404854-82404873 | MS.gene32809:CDS | 55.0% | |
GGCAGGGAGGAAGAATACTG+GGG | + | chr3.1:82403567-82403586 | MS.gene32809:intron | 55.0% | |
GGCGGGTGTGTGCAATATCA+AGG | - | chr3.1:82404837-82404856 | None:intergenic | 55.0% | |
GGGCAGGGAGGAAGAATACT+GGG | + | chr3.1:82403566-82403585 | MS.gene32809:intron | 55.0% | |
TCCAATGTCAGCAGCAAGGC+GGG | - | chr3.1:82404854-82404873 | None:intergenic | 55.0% | |
TCTTATGGCTGGTGCGGTGA+TGG | + | chr3.1:82401527-82401546 | MS.gene32809:CDS | 55.0% | |
TTCCAGAAAGACGGGGTACG+GGG | + | chr3.1:82404925-82404944 | MS.gene32809:CDS | 55.0% | |
TTTGTTGCTGGAGCTGCAGC+AGG | + | chr3.1:82404784-82404803 | MS.gene32809:CDS | 55.0% | |
! | ACGGAAGTGCGTCAATTCCG+AGG | + | chr3.1:82404877-82404896 | MS.gene32809:CDS | 55.0% |
! | AGGGCTAAAGGTGTGCATGC+TGG | - | chr3.1:82403249-82403268 | None:intergenic | 55.0% |
!! | GTATGGGATGGGCTAGACTG+AGG | - | chr3.1:82402784-82402803 | None:intergenic | 55.0% |
!!! | GCCCTGACCCGTGTTTTGAT+CGG | + | chr3.1:82402833-82402852 | MS.gene32809:intron | 55.0% |
ACCCGCCTTGCTGCTGACAT+TGG | + | chr3.1:82404850-82404869 | MS.gene32809:CDS | 60.0% | |
ACGGCCACGGCCACACATAA+AGG | - | chr3.1:82402645-82402664 | None:intergenic | 60.0% | |
ACGGGGTACGGGGGATTTAC+AGG | + | chr3.1:82404935-82404954 | MS.gene32809:CDS | 60.0% | |
ATAGCACCCTCGACTGCTGG+AGG | + | chr3.1:82405187-82405206 | MS.gene32809:CDS | 60.0% | |
CCTCCCTGCCCGTTTGTTTC+AGG | - | chr3.1:82403557-82403576 | None:intergenic | 60.0% | |
CCTGAAACAAACGGGCAGGG+AGG | + | chr3.1:82403554-82403573 | MS.gene32809:intron | 60.0% | |
CGCTTCCACAACGCCAACTC+AGG | - | chr3.1:82405057-82405076 | None:intergenic | 60.0% | |
CGGGCAGGGAGGAAGAATAC+TGG | + | chr3.1:82403565-82403584 | MS.gene32809:intron | 60.0% | |
CGGGGTACGGGGGATTTACA+GGG | + | chr3.1:82404936-82404955 | MS.gene32809:CDS | 60.0% | |
GGCGTTGTGGAAGCGATGGA+TGG | + | chr3.1:82405062-82405081 | MS.gene32809:CDS | 60.0% | |
GGGGTACGGGGGATTTACAG+GGG | + | chr3.1:82404937-82404956 | MS.gene32809:CDS | 60.0% | |
TCCAGAAAGACGGGGTACGG+GGG | + | chr3.1:82404926-82404945 | MS.gene32809:CDS | 60.0% | |
!! | GCATCGTGGGCTAGGCATCT+TGG | + | chr3.1:82404144-82404163 | MS.gene32809:intron | 60.0% |
!! | GGGTAAACTGGTGCTGACCG+TGG | - | chr3.1:82402329-82402348 | None:intergenic | 60.0% |
TCCCCCGTACCCCGTCTTTC+TGG | - | chr3.1:82404930-82404949 | None:intergenic | 65.0% | |
!! | ATGGCTGGTGCGGTGATGGG+TGG | + | chr3.1:82401531-82401550 | MS.gene32809:CDS | 65.0% |
!! | TGGTGCGGTGATGGGTGGTG+CGG | + | chr3.1:82401536-82401555 | MS.gene32809:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 82401432 | 82405344 | 82401432 | ID=MS.gene32809 |
chr3.1 | mRNA | 82401432 | 82405344 | 82401432 | ID=MS.gene32809.t1;Parent=MS.gene32809 |
chr3.1 | exon | 82401432 | 82401776 | 82401432 | ID=MS.gene32809.t1.exon1;Parent=MS.gene32809.t1 |
chr3.1 | CDS | 82401432 | 82401776 | 82401432 | ID=cds.MS.gene32809.t1;Parent=MS.gene32809.t1 |
chr3.1 | exon | 82404709 | 82405344 | 82404709 | ID=MS.gene32809.t1.exon2;Parent=MS.gene32809.t1 |
chr3.1 | CDS | 82404709 | 82405344 | 82404709 | ID=cds.MS.gene32809.t1;Parent=MS.gene32809.t1 |
Gene Sequence |
Protein sequence |