Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82623.t1 | XP_003599946.1 | 97.3 | 401 | 8 | 1 | 1 | 398 | 1 | 401 | 9.50E-216 | 759.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82623.t1 | Q9M5A9 | 73.1 | 409 | 76 | 4 | 1 | 397 | 1 | 387 | 1.4e-159 | 563.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82623.t1 | G7J1A0 | 97.3 | 401 | 8 | 1 | 1 | 398 | 1 | 401 | 6.8e-216 | 759.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene82623 | -0.808422 | 3.12E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene82623 | -0.817655 | 2.95E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene82623 | -0.809194 | 2.13E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene82623 | -0.800615 | 1.33E-48 | -1.69E-46 |
| MS.gene051973 | MS.gene82623 | 0.802243 | 6.15E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene82623 | 0.810853 | 9.37E-51 | -1.69E-46 |
| MS.gene052501 | MS.gene82623 | -0.802579 | 5.25E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene82623 | -0.800691 | 1.28E-48 | -1.69E-46 |
| MS.gene052505 | MS.gene82623 | -0.809507 | 1.83E-50 | -1.69E-46 |
| MS.gene052606 | MS.gene82623 | 0.829627 | 4.63E-55 | -1.69E-46 |
| MS.gene052823 | MS.gene82623 | -0.810756 | 9.84E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene82623 | -0.810524 | 1.10E-50 | -1.69E-46 |
| MS.gene053097 | MS.gene82623 | 0.807089 | 5.99E-50 | -1.69E-46 |
| MS.gene053421 | MS.gene82623 | 0.806435 | 8.24E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene82623 | -0.821704 | 3.51E-53 | -1.69E-46 |
| MS.gene054742 | MS.gene82623 | 0.809177 | 2.15E-50 | -1.69E-46 |
| MS.gene054884 | MS.gene82623 | 0.803552 | 3.30E-49 | -1.69E-46 |
| MS.gene055158 | MS.gene82623 | 0.813128 | 2.99E-51 | -1.69E-46 |
| MS.gene055159 | MS.gene82623 | 0.820725 | 5.89E-53 | -1.69E-46 |
| MS.gene055729 | MS.gene82623 | 0.808888 | 2.48E-50 | -1.69E-46 |
| MS.gene055730 | MS.gene82623 | 0.807326 | 5.34E-50 | -1.69E-46 |
| MS.gene055731 | MS.gene82623 | 0.814248 | 1.70E-51 | -1.69E-46 |
| MS.gene056040 | MS.gene82623 | -0.817582 | 3.06E-52 | -1.69E-46 |
| MS.gene056076 | MS.gene82623 | 0.816642 | 4.98E-52 | -1.69E-46 |
| MS.gene056647 | MS.gene82623 | 0.803325 | 3.68E-49 | -1.69E-46 |
| MS.gene056748 | MS.gene82623 | 0.808681 | 2.75E-50 | -1.69E-46 |
| MS.gene056988 | MS.gene82623 | 0.809495 | 1.84E-50 | -1.69E-46 |
| MS.gene057081 | MS.gene82623 | 0.817168 | 3.79E-52 | -1.69E-46 |
| MS.gene057261 | MS.gene82623 | 0.825357 | 4.90E-54 | -1.69E-46 |
| MS.gene058418 | MS.gene82623 | 0.807554 | 4.78E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene82623 | -0.816286 | 5.98E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene82623 | -0.817224 | 3.68E-52 | -1.69E-46 |
| MS.gene059303 | MS.gene82623 | -0.834907 | 2.28E-56 | -1.69E-46 |
| MS.gene05960 | MS.gene82623 | 0.808085 | 3.68E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene82623 | -0.802887 | 4.53E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene82623 | 0.800778 | 1.23E-48 | -1.69E-46 |
| MS.gene061038 | MS.gene82623 | 0.804057 | 2.59E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82623.t1 | MTR_3g049400 | 97.257 | 401 | 8 | 1 | 1 | 398 | 1 | 401 | 0.0 | 790 |
| MS.gene82623.t1 | MTR_2g022700 | 76.408 | 373 | 75 | 3 | 31 | 398 | 31 | 395 | 0.0 | 558 |
| MS.gene82623.t1 | MTR_4g131800 | 72.237 | 389 | 70 | 4 | 37 | 397 | 36 | 414 | 7.25e-171 | 504 |
| MS.gene82623.t1 | MTR_2g029180 | 52.244 | 312 | 143 | 5 | 87 | 395 | 84 | 392 | 5.48e-98 | 298 |
| MS.gene82623.t1 | MTR_4g088350 | 44.898 | 294 | 153 | 4 | 108 | 397 | 100 | 388 | 4.34e-80 | 252 |
| MS.gene82623.t1 | MTR_5g044220 | 39.820 | 334 | 185 | 5 | 75 | 397 | 65 | 393 | 3.41e-78 | 247 |
| MS.gene82623.t1 | MTR_4g105630 | 41.611 | 298 | 171 | 2 | 103 | 398 | 81 | 377 | 3.94e-72 | 231 |
| MS.gene82623.t1 | MTR_6g005480 | 43.548 | 310 | 170 | 4 | 93 | 398 | 100 | 408 | 5.21e-70 | 226 |
| MS.gene82623.t1 | MTR_3g077640 | 40.741 | 324 | 187 | 4 | 78 | 398 | 81 | 402 | 2.58e-67 | 219 |
| MS.gene82623.t1 | MTR_4g105630 | 40.206 | 291 | 171 | 2 | 103 | 391 | 81 | 370 | 8.81e-67 | 216 |
| MS.gene82623.t1 | MTR_4g088350 | 43.284 | 268 | 143 | 4 | 134 | 397 | 15 | 277 | 6.55e-66 | 211 |
| MS.gene82623.t1 | MTR_4g105630 | 37.549 | 253 | 154 | 3 | 103 | 352 | 81 | 332 | 7.45e-46 | 161 |
| MS.gene82623.t1 | MTR_4g105630 | 39.189 | 222 | 129 | 2 | 103 | 318 | 81 | 302 | 2.43e-44 | 157 |
| MS.gene82623.t1 | MTR_1g030320 | 26.230 | 305 | 186 | 7 | 114 | 398 | 21 | 306 | 2.63e-23 | 100 |
| MS.gene82623.t1 | MTR_3g072380 | 25.902 | 305 | 187 | 7 | 114 | 398 | 22 | 307 | 1.37e-22 | 98.2 |
| MS.gene82623.t1 | MTR_3g070000 | 23.390 | 295 | 213 | 8 | 112 | 398 | 30 | 319 | 3.80e-18 | 85.1 |
| MS.gene82623.t1 | MTR_3g072380 | 29.762 | 168 | 108 | 3 | 114 | 274 | 22 | 186 | 4.42e-17 | 80.5 |
| MS.gene82623.t1 | MTR_3g462070 | 23.973 | 292 | 211 | 7 | 114 | 398 | 17 | 304 | 1.22e-16 | 80.5 |
| MS.gene82623.t1 | MTR_5g081710 | 23.453 | 307 | 221 | 9 | 100 | 398 | 3 | 303 | 1.39e-15 | 77.4 |
| MS.gene82623.t1 | MTR_4g018760 | 21.622 | 296 | 215 | 6 | 113 | 398 | 19 | 307 | 1.17e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82623.t1 | AT1G61800 | 80.447 | 358 | 51 | 3 | 44 | 398 | 47 | 388 | 0.0 | 568 |
| MS.gene82623.t1 | AT5G54800 | 73.105 | 409 | 76 | 4 | 1 | 397 | 1 | 387 | 0.0 | 568 |
| MS.gene82623.t1 | AT1G61800 | 79.609 | 358 | 54 | 3 | 44 | 398 | 47 | 388 | 0.0 | 563 |
| MS.gene82623.t1 | AT5G17630 | 49.008 | 353 | 170 | 5 | 52 | 396 | 52 | 402 | 2.70e-111 | 332 |
| MS.gene82623.t1 | AT4G03950 | 56.376 | 298 | 67 | 7 | 105 | 398 | 16 | 254 | 2.22e-93 | 281 |
| MS.gene82623.t1 | AT5G46110 | 41.818 | 330 | 180 | 6 | 75 | 397 | 73 | 397 | 2.33e-79 | 250 |
| MS.gene82623.t1 | AT5G46110 | 41.818 | 330 | 180 | 6 | 75 | 397 | 73 | 397 | 3.21e-79 | 250 |
| MS.gene82623.t1 | AT5G46110 | 44.444 | 288 | 151 | 4 | 114 | 397 | 2 | 284 | 2.12e-78 | 244 |
| MS.gene82623.t1 | AT5G46110 | 40.606 | 330 | 173 | 7 | 75 | 397 | 73 | 386 | 1.53e-74 | 238 |
| MS.gene82623.t1 | AT3G01550 | 40.064 | 312 | 183 | 3 | 91 | 398 | 62 | 373 | 2.14e-67 | 218 |
| MS.gene82623.t1 | AT3G01550 | 39.103 | 312 | 181 | 4 | 91 | 398 | 62 | 368 | 2.76e-63 | 207 |
| MS.gene82623.t1 | AT5G33320 | 39.688 | 320 | 187 | 5 | 81 | 397 | 83 | 399 | 3.71e-62 | 206 |
| MS.gene82623.t1 | AT1G77610 | 26.821 | 302 | 188 | 6 | 114 | 398 | 16 | 301 | 2.02e-23 | 100 |
| MS.gene82623.t1 | AT1G21870 | 25.424 | 295 | 201 | 6 | 114 | 398 | 22 | 307 | 5.88e-23 | 99.0 |
| MS.gene82623.t1 | AT5G05820 | 23.810 | 294 | 213 | 7 | 112 | 398 | 16 | 305 | 4.97e-18 | 84.3 |
| MS.gene82623.t1 | AT3G11320 | 23.810 | 294 | 213 | 7 | 112 | 398 | 16 | 305 | 3.04e-17 | 82.0 |
| MS.gene82623.t1 | AT1G12500 | 25.503 | 298 | 203 | 10 | 112 | 398 | 64 | 353 | 4.11e-16 | 79.7 |
Find 79 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAGACTGATCTTGAATTT+TGG | 0.179678 | 3.1:+36444583 | MS.gene82623:CDS |
| CCGCAACATCTTCTCGAAAA+AGG | 0.198188 | 3.1:+36445862 | MS.gene82623:CDS |
| TGTGTTGGTGTTGGAAATTT+TGG | 0.226645 | 3.1:+36444264 | MS.gene82623:CDS |
| ACTGGTTCTGATGCTGGTTT+AGG | 0.229388 | 3.1:+36444135 | MS.gene82623:CDS |
| CTCTTATGATGTTGATCTCT+TGG | 0.233486 | 3.1:+36444538 | MS.gene82623:CDS |
| AAAACAGCTCTCGCTGAAAT+TGG | 0.253490 | 3.1:+36446007 | MS.gene82623:CDS |
| GCTGCAAAGAAAGTGAAAAT+TGG | 0.271783 | 3.1:+36444399 | MS.gene82623:CDS |
| TCTGGTTTCGAGATTTATCT+TGG | 0.313532 | 3.1:+36445392 | MS.gene82623:CDS |
| CAAAATTCAAGATCAGTCTT+AGG | 0.324094 | 3.1:-36444582 | None:intergenic |
| CTGTCTTTAGTTCCAATCAT+TGG | 0.330191 | 3.1:+36445441 | MS.gene82623:CDS |
| AAATTGGACCTCAATTCTTA+TGG | 0.330887 | 3.1:+36446023 | MS.gene82623:CDS |
| GGAGCCGCAATTGCTGTCTT+CGG | 0.341789 | 3.1:+36446986 | MS.gene82623:CDS |
| TATGACAGATATACGTTTCA+TGG | 0.344750 | 3.1:-36446912 | None:intergenic |
| GTTTCCAATGCTAAATGTTA+AGG | 0.346594 | 3.1:-36446888 | None:intergenic |
| GAGCCGCAATTGCTGTCTTC+GGG | 0.355259 | 3.1:+36446987 | MS.gene82623:CDS |
| CTGGTTCTGATGCTGGTTTA+GGG | 0.374659 | 3.1:+36444136 | MS.gene82623:CDS |
| AGAGCATTGACGGGCTGAAT+TGG | 0.376700 | 3.1:-36446962 | None:intergenic |
| GTGATCACTGGTTCTGATGC+TGG | 0.379531 | 3.1:+36444129 | MS.gene82623:CDS |
| GAGCTCAATTTCAATATGAT+TGG | 0.383141 | 3.1:+36445489 | MS.gene82623:CDS |
| TATCCAGCAGCCCACATTGC+TGG | 0.395472 | 3.1:-36445983 | None:intergenic |
| GTTGCTGTTGCACACACAAT+TGG | 0.398110 | 3.1:+36445285 | MS.gene82623:CDS |
| TCTTATGATGTTGATCTCTT+GGG | 0.408536 | 3.1:+36444539 | MS.gene82623:CDS |
| CTGCAAAGAAAGTGAAAATT+GGG | 0.417900 | 3.1:+36444400 | MS.gene82623:CDS |
| AAAATGATTGTGGTTGAACT+AGG | 0.419003 | 3.1:-36444173 | None:intergenic |
| TTTAATTACCATAAGAATTG+AGG | 0.427313 | 3.1:-36446031 | None:intergenic |
| TTTCCAATGCTAAATGTTAA+GGG | 0.432602 | 3.1:-36446887 | None:intergenic |
| ACTTTCTTTGCAGCCTCTGA+AGG | 0.435598 | 3.1:-36444390 | None:intergenic |
| ATTCAGCCCGTCAATGCTCT+TGG | 0.442993 | 3.1:+36446965 | MS.gene82623:CDS |
| GGACCAGCAATGTGGGCTGC+TGG | 0.446642 | 3.1:+36445980 | MS.gene82623:CDS |
| TGCGGCTCCAAGAGCATTGA+CGG | 0.448915 | 3.1:-36446972 | None:intergenic |
| TCTTTAGTTCCAATCATTGG+TGG | 0.450678 | 3.1:+36445444 | MS.gene82623:CDS |
| TGTAAACGATACAGCAACTT+TGG | 0.463223 | 3.1:-36445334 | None:intergenic |
| ATTCTATCATCTATACAATC+AGG | 0.464239 | 3.1:+36446835 | MS.gene82623:CDS |
| AGTGCACATCCACCAATGAT+TGG | 0.466284 | 3.1:-36445453 | None:intergenic |
| CTGGTTTCGAGATTTATCTT+GGG | 0.470237 | 3.1:+36445393 | MS.gene82623:CDS |
| GTTGATGTAAGCCAAGGGTA+AGG | 0.477983 | 3.1:-36444495 | None:intergenic |
| AATTGGACATGTCGCGGCTA+CGG | 0.479497 | 3.1:+36445302 | MS.gene82623:CDS |
| TGAATGCTTACCCTTACCCT+TGG | 0.485194 | 3.1:+36444484 | MS.gene82623:CDS |
| TTGTCTCAACGATGAAATCA+TGG | 0.485709 | 3.1:-36444097 | None:intergenic |
| ATGAAGGGAAAGTCTGTTAG+TGG | 0.498113 | 3.1:+36445887 | MS.gene82623:CDS |
| GTTTAATATTTATAACAAGA+AGG | 0.502820 | 3.1:+36444458 | MS.gene82623:CDS |
| CGGGACCTTCTTATACTCTC+AGG | 0.506019 | 3.1:+36447006 | MS.gene82623:CDS |
| TCTCCCTTAACATTTAGCAT+TGG | 0.512173 | 3.1:+36446884 | MS.gene82623:CDS |
| AAAGACAGATAGACTGGCAC+AGG | 0.513511 | 3.1:-36445426 | None:intergenic |
| CATATTGCATGTGTTGGTGT+TGG | 0.517284 | 3.1:+36444255 | MS.gene82623:CDS |
| TGTTGATCTCTTGGGCCACT+AGG | 0.518207 | 3.1:+36444547 | MS.gene82623:CDS |
| CACACCCTTTGCAATTGCTG+TGG | 0.527121 | 3.1:+36445955 | MS.gene82623:CDS |
| TGACGGGCTGAATTGGTGTA+TGG | 0.536988 | 3.1:-36446955 | None:intergenic |
| CCCTTTGCAATTGCTGTGGA+AGG | 0.538634 | 3.1:+36445959 | MS.gene82623:CDS |
| AGATCAGAGATTGAAGGTGC+AGG | 0.549014 | 3.1:+36444363 | MS.gene82623:CDS |
| GCTGATAGATCAGAGATTGA+AGG | 0.555536 | 3.1:+36444357 | MS.gene82623:CDS |
| CAACCTGGTATTGTGATCAC+TGG | 0.556416 | 3.1:+36444117 | MS.gene82623:CDS |
| TCAGGTGTCTTACATGTCGT+TGG | 0.558309 | 3.1:+36446853 | MS.gene82623:CDS |
| AAATGATTGTGGTTGAACTA+GGG | 0.559575 | 3.1:-36444172 | None:intergenic |
| GGAACTAAAGACAGATAGAC+TGG | 0.559770 | 3.1:-36445432 | None:intergenic |
| CCTTCCACAGCAATTGCAAA+GGG | 0.561294 | 3.1:-36445959 | None:intergenic |
| GAGAGAGTTGATGTAAGCCA+AGG | 0.562039 | 3.1:-36444501 | None:intergenic |
| ATTTCATCGTTGAGACAACC+TGG | 0.572716 | 3.1:+36444102 | MS.gene82623:CDS |
| CCTCTTCATATTGCATGTGT+TGG | 0.574445 | 3.1:+36444249 | MS.gene82623:CDS |
| TCAACTCTCTCACTTGCTTG+TGG | 0.577730 | 3.1:+36444513 | MS.gene82623:CDS |
| CCAACACATGCAATATGAAG+AGG | 0.584768 | 3.1:-36444249 | None:intergenic |
| CAGATAGACTGGCACAGGGA+AGG | 0.585869 | 3.1:-36445421 | None:intergenic |
| TCCTTCCACAGCAATTGCAA+AGG | 0.590569 | 3.1:-36445960 | None:intergenic |
| GGTCCCGAAGACAGCAATTG+CGG | 0.591919 | 3.1:-36446990 | None:intergenic |
| AAGTACCTGAGAGTATAAGA+AGG | 0.598923 | 3.1:-36447011 | None:intergenic |
| CAAAGGGTGTGAGAATTGCA+AGG | 0.600027 | 3.1:-36445943 | None:intergenic |
| AGGTGCAGGAACACCTTCAG+AGG | 0.600972 | 3.1:+36444377 | MS.gene82623:CDS |
| GCGGCTCCAAGAGCATTGAC+GGG | 0.602591 | 3.1:-36446971 | None:intergenic |
| GAAACCAGAACACTAAAAGC+AGG | 0.604333 | 3.1:-36445378 | None:intergenic |
| TTGATGTAAGCCAAGGGTAA+GGG | 0.604430 | 3.1:-36444494 | None:intergenic |
| AGAGAGTTGATGTAAGCCAA+GGG | 0.622530 | 3.1:-36444500 | None:intergenic |
| TTTACACATATCATCAAGAG+TGG | 0.634575 | 3.1:+36445351 | MS.gene82623:CDS |
| TGTGGAAGGACCAGCAATGT+GGG | 0.639694 | 3.1:+36445973 | MS.gene82623:CDS |
| GAACCAGTGATCACAATACC+AGG | 0.646544 | 3.1:-36444120 | None:intergenic |
| ACACACAATTGGACATGTCG+CGG | 0.658566 | 3.1:+36445296 | MS.gene82623:CDS |
| AAAGGGTGTGAGAATTGCAA+GGG | 0.680969 | 3.1:-36445942 | None:intergenic |
| AGGAGCTTCAGCAATCCTAG+TGG | 0.698645 | 3.1:-36444562 | None:intergenic |
| CTGTGGAAGGACCAGCAATG+TGG | 0.703927 | 3.1:+36445972 | MS.gene82623:CDS |
| AAGACAGATAGACTGGCACA+GGG | 0.744929 | 3.1:-36445425 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTACAAATAACATTTTTAAT+CGG | + | chr3.1:36448017-36448036 | MS.gene82623:intron | 10.0% |
| !! | GTTTAATATTTATAACAAGA+AGG | + | chr3.1:36444458-36444477 | MS.gene82623:CDS | 15.0% |
| !!! | TTCTTATATGTTTTTTGTTT+TGG | + | chr3.1:36444702-36444721 | MS.gene82623:intron | 15.0% |
| !! | AAAAACAAATTCAAACTTAC+AGG | - | chr3.1:36444621-36444640 | None:intergenic | 20.0% |
| !! | AAAACAAATTCAAACTTACA+GGG | - | chr3.1:36444620-36444639 | None:intergenic | 20.0% |
| !! | AAGTCAATGAAATCAAAATT+AGG | - | chr3.1:36445782-36445801 | None:intergenic | 20.0% |
| !! | AATAATATGAAGCACAATTA+AGG | - | chr3.1:36447307-36447326 | None:intergenic | 20.0% |
| !! | AGTCAATGAAATCAAAATTA+GGG | - | chr3.1:36445781-36445800 | None:intergenic | 20.0% |
| !! | ATAATCTGTGTTTGATTAAT+TGG | + | chr3.1:36445627-36445646 | MS.gene82623:intron | 20.0% |
| !! | ATTCATTGTCTTTATGAAAA+GGG | + | chr3.1:36447513-36447532 | MS.gene82623:intron | 20.0% |
| !! | TAATCTGTGTTTGATTAATT+GGG | + | chr3.1:36445628-36445647 | MS.gene82623:intron | 20.0% |
| !! | TGAGTTAAGAAAAAAAACAA+AGG | + | chr3.1:36444788-36444807 | MS.gene82623:intron | 20.0% |
| !! | TGGAAAATATAGAAAAAGAA+GGG | + | chr3.1:36447843-36447862 | MS.gene82623:intron | 20.0% |
| !! | TTAATTGTGCTTCATATTAT+TGG | + | chr3.1:36447306-36447325 | MS.gene82623:intron | 20.0% |
| !! | TTGGAAAATATAGAAAAAGA+AGG | + | chr3.1:36447842-36447861 | MS.gene82623:intron | 20.0% |
| !! | TTTAATTACCATAAGAATTG+AGG | - | chr3.1:36446034-36446053 | None:intergenic | 20.0% |
| !!! | AAAATTCACGATCTTTTATT+AGG | + | chr3.1:36446152-36446171 | MS.gene82623:intron | 20.0% |
| !!! | AGTTAATGTTGTTTAAATGA+TGG | + | chr3.1:36446618-36446637 | MS.gene82623:intron | 20.0% |
| !!! | ATTTTAAATTCTTTAGTTGC+AGG | + | chr3.1:36446477-36446496 | MS.gene82623:intron | 20.0% |
| !!! | GATCGTGAATTTTTTTTTAA+AGG | - | chr3.1:36446145-36446164 | None:intergenic | 20.0% |
| !!! | GCAACTAAAGAATTTAAAAT+TGG | - | chr3.1:36446477-36446496 | None:intergenic | 20.0% |
| !!! | GCATTTTTTTTTTTTTTCTC+TGG | + | chr3.1:36447461-36447480 | MS.gene82623:intron | 20.0% |
| !!! | GTTTTTGTTTTTTTCTTTAG+AGG | + | chr3.1:36444635-36444654 | MS.gene82623:intron | 20.0% |
| !!! | TATTTTGTTTTTACGTTGTT+TGG | + | chr3.1:36445535-36445554 | MS.gene82623:intron | 20.0% |
| !!! | TTCTTTTTCTATATTTTCCA+AGG | - | chr3.1:36447843-36447862 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTGTTCTGATT+GGG | + | chr3.1:36446699-36446718 | MS.gene82623:intron | 20.0% |
| !!! | TTTTTTTTTCTTGTTCTGAT+TGG | + | chr3.1:36446698-36446717 | MS.gene82623:intron | 20.0% |
| ! | AAAAAAATTATTCATGCACG+AGG | - | chr3.1:36446655-36446674 | None:intergenic | 25.0% |
| ! | AAAGATGGTAAAAATGATTG+TGG | - | chr3.1:36444186-36444205 | None:intergenic | 25.0% |
| ! | AAGTCAACAAGAGTTTATTA+TGG | + | chr3.1:36447554-36447573 | MS.gene82623:intron | 25.0% |
| ! | AATTGATTGGAGAAATTGAT+AGG | + | chr3.1:36444668-36444687 | MS.gene82623:intron | 25.0% |
| ! | AGAGTTTATTATGGAAAAGA+TGG | + | chr3.1:36447563-36447582 | MS.gene82623:intron | 25.0% |
| ! | AGGAAAAGAGAAAAATTGAT+TGG | + | chr3.1:36444655-36444674 | MS.gene82623:intron | 25.0% |
| ! | ATGATGAATAATATGAGTAG+AGG | - | chr3.1:36447248-36447267 | None:intergenic | 25.0% |
| ! | ATTCTATCATCTATACAATC+AGG | + | chr3.1:36446835-36446854 | MS.gene82623:CDS | 25.0% |
| ! | CAGGAAGGAAAAAAAAAAAT+AGG | + | chr3.1:36447385-36447404 | MS.gene82623:intron | 25.0% |
| ! | CATAATATCAATATGGTGAA+AGG | + | chr3.1:36446278-36446297 | MS.gene82623:intron | 25.0% |
| ! | CATTCATTGTCTTTATGAAA+AGG | + | chr3.1:36447512-36447531 | MS.gene82623:intron | 25.0% |
| ! | CTACTCATATTATTCATCAT+CGG | + | chr3.1:36447248-36447267 | MS.gene82623:intron | 25.0% |
| ! | GAAATATTTCAATGTGTTTG+TGG | + | chr3.1:36444852-36444871 | MS.gene82623:intron | 25.0% |
| ! | GTCAATGAAATCAAAATTAG+GGG | - | chr3.1:36445780-36445799 | None:intergenic | 25.0% |
| ! | TAACTATTATATCAGTCTTC+TGG | + | chr3.1:36446181-36446200 | MS.gene82623:intron | 25.0% |
| ! | TCAAAGTGATAAATGAATGA+AGG | - | chr3.1:36445227-36445246 | None:intergenic | 25.0% |
| ! | TCCATATTATGACTAAAGTA+TGG | + | chr3.1:36446771-36446790 | MS.gene82623:intron | 25.0% |
| ! | TCTTACAACCAAACAATAAA+CGG | - | chr3.1:36446741-36446760 | None:intergenic | 25.0% |
| ! | TGATGAATAATATGAGTAGA+GGG | - | chr3.1:36447247-36447266 | None:intergenic | 25.0% |
| ! | TTTCCAATGCTAAATGTTAA+GGG | - | chr3.1:36446890-36446909 | None:intergenic | 25.0% |
| !! | ACTAGAATTTTGAATGTGAA+TGG | + | chr3.1:36445591-36445610 | MS.gene82623:intron | 25.0% |
| !! | CAAAAAATAGCAATTTGTTC+TGG | - | chr3.1:36445143-36445162 | None:intergenic | 25.0% |
| !! | TGCAATTTTGAACTCATATA+TGG | + | chr3.1:36444746-36444765 | MS.gene82623:intron | 25.0% |
| !!! | ACAATCATTTTTACCATCTT+TGG | + | chr3.1:36444185-36444204 | MS.gene82623:CDS | 25.0% |
| AAAATGATTGTGGTTGAACT+AGG | - | chr3.1:36444176-36444195 | None:intergenic | 30.0% | |
| AAATGATTGTGGTTGAACTA+GGG | - | chr3.1:36444175-36444194 | None:intergenic | 30.0% | |
| AAATTGGACCTCAATTCTTA+TGG | + | chr3.1:36446023-36446042 | MS.gene82623:CDS | 30.0% | |
| AAGAAGGGTTAGAAACAATT+TGG | + | chr3.1:36447858-36447877 | MS.gene82623:intron | 30.0% | |
| AAGTTCAAACCAATAGAGTT+AGG | - | chr3.1:36447641-36447660 | None:intergenic | 30.0% | |
| ACATTAACTCATAAAAACCC+AGG | - | chr3.1:36446607-36446626 | None:intergenic | 30.0% | |
| ACGATGACAACAAACATAAT+AGG | - | chr3.1:36446083-36446102 | None:intergenic | 30.0% | |
| ACTTTAGTCATAATATGGAG+AGG | - | chr3.1:36446770-36446789 | None:intergenic | 30.0% | |
| AGACACGCATAATATCAATA+TGG | + | chr3.1:36446271-36446290 | MS.gene82623:intron | 30.0% | |
| ATAGAGTACAAAGGATTGAA+TGG | - | chr3.1:36444998-36445017 | None:intergenic | 30.0% | |
| ATATTTCAATGTGTTTGTGG+AGG | + | chr3.1:36444855-36444874 | MS.gene82623:intron | 30.0% | |
| ATTACAAGAAACATGTTCGT+TGG | - | chr3.1:36445730-36445749 | None:intergenic | 30.0% | |
| ATTACTGTTACTACATGTCA+GGG | + | chr3.1:36447176-36447195 | MS.gene82623:intron | 30.0% | |
| ATTATGCACATAGAGTACAA+AGG | - | chr3.1:36445007-36445026 | None:intergenic | 30.0% | |
| ATTGATATTATGCGTGTCTT+TGG | - | chr3.1:36446270-36446289 | None:intergenic | 30.0% | |
| CAAAATTCAAGATCAGTCTT+AGG | - | chr3.1:36444585-36444604 | None:intergenic | 30.0% | |
| CGAACAATTGTGAAATGATA+TGG | + | chr3.1:36445194-36445213 | MS.gene82623:intron | 30.0% | |
| CGATGACAACAAACATAATA+GGG | - | chr3.1:36446082-36446101 | None:intergenic | 30.0% | |
| CTGCAAAAATCAGTAAAACA+AGG | - | chr3.1:36448056-36448075 | None:intergenic | 30.0% | |
| CTGCAAAGAAAGTGAAAATT+GGG | + | chr3.1:36444400-36444419 | MS.gene82623:CDS | 30.0% | |
| GAGCTCAATTTCAATATGAT+TGG | + | chr3.1:36445489-36445508 | MS.gene82623:CDS | 30.0% | |
| GCCATACTTTAGTCATAATA+TGG | - | chr3.1:36446775-36446794 | None:intergenic | 30.0% | |
| GTCGAATGAATCAATGATTT+AGG | - | chr3.1:36446245-36446264 | None:intergenic | 30.0% | |
| GTTTATTATGGAAAAGATGG+AGG | + | chr3.1:36447566-36447585 | MS.gene82623:intron | 30.0% | |
| GTTTCCAATGCTAAATGTTA+AGG | - | chr3.1:36446891-36446910 | None:intergenic | 30.0% | |
| TATAGCTGCCAATAAAACAT+TGG | - | chr3.1:36447605-36447624 | None:intergenic | 30.0% | |
| TATGACAGATATACGTTTCA+TGG | - | chr3.1:36446915-36446934 | None:intergenic | 30.0% | |
| TATTACTGTTACTACATGTC+AGG | + | chr3.1:36447175-36447194 | MS.gene82623:intron | 30.0% | |
| TATTATGACTAAAGTATGGC+TGG | + | chr3.1:36446775-36446794 | MS.gene82623:intron | 30.0% | |
| TCAAGTCCCAAATCAAAATA+AGG | - | chr3.1:36446538-36446557 | None:intergenic | 30.0% | |
| TCTTATGATGTTGATCTCTT+GGG | + | chr3.1:36444539-36444558 | MS.gene82623:CDS | 30.0% | |
| TTCTTTGATGTTTCAACTTC+AGG | + | chr3.1:36445263-36445282 | MS.gene82623:intron | 30.0% | |
| TTGTCTTTATGAAAAGGGTT+TGG | + | chr3.1:36447518-36447537 | MS.gene82623:intron | 30.0% | |
| TTTACACATATCATCAAGAG+TGG | + | chr3.1:36445351-36445370 | MS.gene82623:CDS | 30.0% | |
| TTTGACAACACTTAGCTAAA+TGG | - | chr3.1:36445073-36445092 | None:intergenic | 30.0% | |
| TTTGTACTCTATGTGCATAA+TGG | + | chr3.1:36445006-36445025 | MS.gene82623:intron | 30.0% | |
| ! | AGCTAAGTGTTGTCAAATAA+CGG | + | chr3.1:36445076-36445095 | MS.gene82623:intron | 30.0% |
| ! | CTAAGACTGATCTTGAATTT+TGG | + | chr3.1:36444583-36444602 | MS.gene82623:CDS | 30.0% |
| ! | GATATATTTTGCAACTTGGT+GGG | + | chr3.1:36444422-36444441 | MS.gene82623:CDS | 30.0% |
| ! | TAGGTGATCCAATGTTTTAT+TGG | + | chr3.1:36447594-36447613 | MS.gene82623:intron | 30.0% |
| ! | TGAATGAGTTTGAAATCCTA+TGG | - | chr3.1:36447498-36447517 | None:intergenic | 30.0% |
| ! | TTGGGATATATTTTGCAACT+TGG | + | chr3.1:36444418-36444437 | MS.gene82623:CDS | 30.0% |
| ! | TTTTATTGGCAGCTATACTT+GGG | + | chr3.1:36447608-36447627 | MS.gene82623:intron | 30.0% |
| !! | TCATTTTTACCATCTTTGGT+TGG | + | chr3.1:36444189-36444208 | MS.gene82623:CDS | 30.0% |
| !!! | ATCAGAGAAGAGTTTTGAAA+AGG | + | chr3.1:36444305-36444324 | MS.gene82623:CDS | 30.0% |
| !!! | CTTGTTTTACTGATTTTTGC+AGG | + | chr3.1:36448054-36448073 | MS.gene82623:intron | 30.0% |
| !!! | GTCCATCCTTATTTTGATTT+GGG | + | chr3.1:36446529-36446548 | MS.gene82623:intron | 30.0% |
| !!! | TCAGAGAAGAGTTTTGAAAA+GGG | + | chr3.1:36444306-36444325 | MS.gene82623:CDS | 30.0% |
| !!! | TGTCCATCCTTATTTTGATT+TGG | + | chr3.1:36446528-36446547 | MS.gene82623:intron | 30.0% |
| !!! | TTCCCTTTTTCAGGTTTTAT+GGG | + | chr3.1:36445809-36445828 | MS.gene82623:intron | 30.0% |
| !!! | TTTTTTTCCTTCCCTTTTTC+AGG | + | chr3.1:36445800-36445819 | MS.gene82623:intron | 30.0% |
| AACCAAACAATAAACGGAAG+TGG | - | chr3.1:36446735-36446754 | None:intergenic | 35.0% | |
| AAGTCAATGTCAACATGAGT+TGG | + | chr3.1:36447690-36447709 | MS.gene82623:intron | 35.0% | |
| AGTAAAAGCAGTTTCCATGT+AGG | + | chr3.1:36447816-36447835 | MS.gene82623:intron | 35.0% | |
| CAATATGGTGAAAGGTCAAA+TGG | + | chr3.1:36446286-36446305 | MS.gene82623:intron | 35.0% | |
| CATAAAACCTGAAAAAGGGA+AGG | - | chr3.1:36445810-36445829 | None:intergenic | 35.0% | |
| CTCTTATGATGTTGATCTCT+TGG | + | chr3.1:36444538-36444557 | MS.gene82623:CDS | 35.0% | |
| CTGGTTTCGAGATTTATCTT+GGG | + | chr3.1:36445393-36445412 | MS.gene82623:CDS | 35.0% | |
| CTTGGAAAAGGAATATGTGA+TGG | - | chr3.1:36447673-36447692 | None:intergenic | 35.0% | |
| GAAAAGGAATATGTGATGGT+AGG | - | chr3.1:36447669-36447688 | None:intergenic | 35.0% | |
| GCCAAAAAATGCAAAACTAC+TGG | - | chr3.1:36445656-36445675 | None:intergenic | 35.0% | |
| GCTGCAAAGAAAGTGAAAAT+TGG | + | chr3.1:36444399-36444418 | MS.gene82623:CDS | 35.0% | |
| GCTTCTAATAGGAGATTCAA+TGG | + | chr3.1:36447788-36447807 | MS.gene82623:intron | 35.0% | |
| GGATCAGTATTGTCAAATAG+TGG | + | chr3.1:36445027-36445046 | MS.gene82623:intron | 35.0% | |
| GTCCCAAATCAAAATAAGGA+TGG | - | chr3.1:36446534-36446553 | None:intergenic | 35.0% | |
| TATTAGAAGCCTCAATGTGA+AGG | - | chr3.1:36447778-36447797 | None:intergenic | 35.0% | |
| TCAAACCAATAGAGTTAGGT+AGG | - | chr3.1:36447637-36447656 | None:intergenic | 35.0% | |
| TCTCCCTTAACATTTAGCAT+TGG | + | chr3.1:36446884-36446903 | MS.gene82623:CDS | 35.0% | |
| TCTTTATGAAAAGGGTTTGG+TGG | + | chr3.1:36447521-36447540 | MS.gene82623:intron | 35.0% | |
| TGAAAGATCCATTACGAAGA+GGG | + | chr3.1:36447330-36447349 | MS.gene82623:intron | 35.0% | |
| TGTAAACGATACAGCAACTT+TGG | - | chr3.1:36445337-36445356 | None:intergenic | 35.0% | |
| TGTGATTGACAGCAATGTAA+CGG | + | chr3.1:36445168-36445187 | MS.gene82623:intron | 35.0% | |
| TTCACATTGAGGCTTCTAAT+AGG | + | chr3.1:36447777-36447796 | MS.gene82623:intron | 35.0% | |
| TTCCACTTCCGTTTATTGTT+TGG | + | chr3.1:36446730-36446749 | MS.gene82623:intron | 35.0% | |
| ! | AACTCATGTTGACATTGACT+TGG | - | chr3.1:36447691-36447710 | None:intergenic | 35.0% |
| ! | AAGTACCTGAGAGTATAAGA+AGG | - | chr3.1:36447014-36447033 | None:intergenic | 35.0% |
| ! | ATATTTTCCAAGGTCCTACA+TGG | - | chr3.1:36447833-36447852 | None:intergenic | 35.0% |
| ! | CTGTCTTTAGTTCCAATCAT+TGG | + | chr3.1:36445441-36445460 | MS.gene82623:CDS | 35.0% |
| ! | GGATATATTTTGCAACTTGG+TGG | + | chr3.1:36444421-36444440 | MS.gene82623:CDS | 35.0% |
| ! | TCTGGTTTCGAGATTTATCT+TGG | + | chr3.1:36445392-36445411 | MS.gene82623:CDS | 35.0% |
| ! | TCTTTAGTTCCAATCATTGG+TGG | + | chr3.1:36445444-36445463 | MS.gene82623:CDS | 35.0% |
| ! | TTTAGAATCCGAATAGCTCA+GGG | + | chr3.1:36444905-36444924 | MS.gene82623:intron | 35.0% |
| ! | TTTTTACCATCTTTGGTTGG+TGG | + | chr3.1:36444192-36444211 | MS.gene82623:CDS | 35.0% |
| !! | GCCAGTAGTTTTGCATTTTT+TGG | + | chr3.1:36445652-36445671 | MS.gene82623:intron | 35.0% |
| !! | GTTTTATTGGCAGCTATACT+TGG | + | chr3.1:36447607-36447626 | MS.gene82623:intron | 35.0% |
| !! | TACATGGAAACTGCTTTTAC+TGG | - | chr3.1:36447817-36447836 | None:intergenic | 35.0% |
| !! | TGTTGACATTGACTTGGAAA+AGG | - | chr3.1:36447685-36447704 | None:intergenic | 35.0% |
| !!! | CTTCCCTTTTTCAGGTTTTA+TGG | + | chr3.1:36445808-36445827 | MS.gene82623:intron | 35.0% |
| !!! | GAGTTTTGAAAAGGGTGATT+TGG | + | chr3.1:36444314-36444333 | MS.gene82623:CDS | 35.0% |
| !!! | GCATTTTTTGGCTAGTAATC+TGG | + | chr3.1:36445664-36445683 | MS.gene82623:intron | 35.0% |
| !!! | GTGTTGGTGTTGGAAATTTT+GGG | + | chr3.1:36444265-36444284 | MS.gene82623:CDS | 35.0% |
| !!! | TCCCTTTTTCAGGTTTTATG+GGG | + | chr3.1:36445810-36445829 | MS.gene82623:intron | 35.0% |
| !!! | TGTGTTGGTGTTGGAAATTT+TGG | + | chr3.1:36444264-36444283 | MS.gene82623:CDS | 35.0% |
| !!! | TTTTAGAATCCGAATAGCTC+AGG | + | chr3.1:36444904-36444923 | MS.gene82623:intron | 35.0% |
| AAAACAGCTCTCGCTGAAAT+TGG | + | chr3.1:36446007-36446026 | MS.gene82623:CDS | 40.0% | |
| AACACATTCCCTCTTCGTAA+TGG | - | chr3.1:36447341-36447360 | None:intergenic | 40.0% | |
| AAGGAATATGTGATGGTAGG+TGG | - | chr3.1:36447666-36447685 | None:intergenic | 40.0% | |
| AATGTGTTTGTGGAGGTTTG+TGG | + | chr3.1:36444862-36444881 | MS.gene82623:intron | 40.0% | |
| ACAAGAAACATGTTCGTTGG+TGG | - | chr3.1:36445727-36445746 | None:intergenic | 40.0% | |
| ACCAATGTGCTTTGCTAGAA+GGG | - | chr3.1:36447433-36447452 | None:intergenic | 40.0% | |
| ACCTACCAACTGTAGAAATC+TGG | + | chr3.1:36447915-36447934 | MS.gene82623:intron | 40.0% | |
| ACTTGAACCTAAGTCACAAC+GGG | + | chr3.1:36447938-36447957 | MS.gene82623:intron | 40.0% | |
| ATAGATTGAGTAGTCTCGAC+AGG | - | chr3.1:36446339-36446358 | None:intergenic | 40.0% | |
| ATAGGACTAGAACCTCAAAG+TGG | + | chr3.1:36447403-36447422 | MS.gene82623:intron | 40.0% | |
| ATATGTAGCTCCAACAAGTC+AGG | + | chr3.1:36447053-36447072 | MS.gene82623:intron | 40.0% | |
| ATGAAGGGAAAGTCTGTTAG+TGG | + | chr3.1:36445887-36445906 | MS.gene82623:CDS | 40.0% | |
| ATGTGTTTGTGGAGGTTTGT+GGG | + | chr3.1:36444863-36444882 | MS.gene82623:intron | 40.0% | |
| ATTACGAAGAGGGAATGTGT+TGG | + | chr3.1:36447340-36447359 | MS.gene82623:intron | 40.0% | |
| ATTTCATCGTTGAGACAACC+TGG | + | chr3.1:36444102-36444121 | MS.gene82623:CDS | 40.0% | |
| CAAGTCCAGATTTCTACAGT+TGG | - | chr3.1:36447923-36447942 | None:intergenic | 40.0% | |
| CCAACACATGCAATATGAAG+AGG | - | chr3.1:36444252-36444271 | None:intergenic | 40.0% | |
| CCCCCATAAAACCTGAAAAA+GGG | - | chr3.1:36445814-36445833 | None:intergenic | 40.0% | |
| CCTCTTCATATTGCATGTGT+TGG | + | chr3.1:36444249-36444268 | MS.gene82623:CDS | 40.0% | |
| CGCAACATCTTCTCGAAAAA+GGG | + | chr3.1:36445863-36445882 | MS.gene82623:CDS | 40.0% | |
| CTGAAAGATCCATTACGAAG+AGG | + | chr3.1:36447329-36447348 | MS.gene82623:intron | 40.0% | |
| GAAACCAGAACACTAAAAGC+AGG | - | chr3.1:36445381-36445400 | None:intergenic | 40.0% | |
| GACTTGAACCTAAGTCACAA+CGG | + | chr3.1:36447937-36447956 | MS.gene82623:intron | 40.0% | |
| GCAACATCTTCTCGAAAAAG+GGG | + | chr3.1:36445864-36445883 | MS.gene82623:CDS | 40.0% | |
| GCTGATAGATCAGAGATTGA+AGG | + | chr3.1:36444357-36444376 | MS.gene82623:CDS | 40.0% | |
| GGAACTAAAGACAGATAGAC+TGG | - | chr3.1:36445435-36445454 | None:intergenic | 40.0% | |
| GGATTCCTACCTAACTCTAT+TGG | + | chr3.1:36447629-36447648 | MS.gene82623:intron | 40.0% | |
| GTACAAAGGATTGAATGGAC+TGG | - | chr3.1:36444993-36445012 | None:intergenic | 40.0% | |
| TCCAGATTTCTACAGTTGGT+AGG | - | chr3.1:36447919-36447938 | None:intergenic | 40.0% | |
| TTACGAAGAGGGAATGTGTT+GGG | + | chr3.1:36447341-36447360 | MS.gene82623:intron | 40.0% | |
| TTCTCGAAAAAGGGGATGAA+GGG | + | chr3.1:36445872-36445891 | MS.gene82623:CDS | 40.0% | |
| TTGATGTAAGCCAAGGGTAA+GGG | - | chr3.1:36444497-36444516 | None:intergenic | 40.0% | |
| TTTGGCGCAATATAAGTTCG+AGG | + | chr3.1:36445553-36445572 | MS.gene82623:intron | 40.0% | |
| ! | AAAGGGTGTGAGAATTGCAA+GGG | - | chr3.1:36445945-36445964 | None:intergenic | 40.0% |
| ! | ACACCATTAACCTGACTTGT+TGG | - | chr3.1:36447066-36447085 | None:intergenic | 40.0% |
| ! | AGAGGGCACAGTAAAAAATG+AGG | - | chr3.1:36447230-36447249 | None:intergenic | 40.0% |
| ! | CATATTGCATGTGTTGGTGT+TGG | + | chr3.1:36444255-36444274 | MS.gene82623:CDS | 40.0% |
| ! | GAGGGCACAGTAAAAAATGA+GGG | - | chr3.1:36447229-36447248 | None:intergenic | 40.0% |
| ! | GATTTTCCACCAACCAAAGA+TGG | - | chr3.1:36444201-36444220 | None:intergenic | 40.0% |
| ! | TCTGGAGTAAAAACTGCCAT+AGG | + | chr3.1:36447479-36447498 | MS.gene82623:intron | 40.0% |
| ! | TGTGGGGTTTTTATGCAGTT+CGG | + | chr3.1:36444880-36444899 | MS.gene82623:intron | 40.0% |
| !! | AGAGAGTTGATGTAAGCCAA+GGG | - | chr3.1:36444503-36444522 | None:intergenic | 40.0% |
| !! | GTTTGTGGTTTGCTCATTAC+AGG | + | chr3.1:36447366-36447385 | MS.gene82623:intron | 40.0% |
| !!! | CCCTTTTTCAGGTTTTATGG+GGG | + | chr3.1:36445811-36445830 | MS.gene82623:intron | 40.0% |
| !!! | CCTTTTTCGAGAAGATGTTG+CGG | - | chr3.1:36445865-36445884 | None:intergenic | 40.0% |
| AAAGACAGATAGACTGGCAC+AGG | - | chr3.1:36445429-36445448 | None:intergenic | 45.0% | |
| AAATCATGTGCTCAGGTGTC+TGG | - | chr3.1:36447747-36447766 | None:intergenic | 45.0% | |
| AAGACAGATAGACTGGCACA+GGG | - | chr3.1:36445428-36445447 | None:intergenic | 45.0% | |
| ACACACAATTGGACATGTCG+CGG | + | chr3.1:36445296-36445315 | MS.gene82623:CDS | 45.0% | |
| ACCCTTCTAGCAAAGCACAT+TGG | + | chr3.1:36447429-36447448 | MS.gene82623:intron | 45.0% | |
| ACTTTCTTTGCAGCCTCTGA+AGG | - | chr3.1:36444393-36444412 | None:intergenic | 45.0% | |
| AGACACCTGAGCACATGATT+TGG | + | chr3.1:36447746-36447765 | MS.gene82623:intron | 45.0% | |
| AGTGCACATCCACCAATGAT+TGG | - | chr3.1:36445456-36445475 | None:intergenic | 45.0% | |
| CAACCTGGTATTGTGATCAC+TGG | + | chr3.1:36444117-36444136 | MS.gene82623:CDS | 45.0% | |
| CACCAATGTGCTTTGCTAGA+AGG | - | chr3.1:36447434-36447453 | None:intergenic | 45.0% | |
| CCAACTCCAGTTGACACAAA+TGG | - | chr3.1:36447980-36447999 | None:intergenic | 45.0% | |
| CCATTTGTGTCAACTGGAGT+TGG | + | chr3.1:36447977-36447996 | MS.gene82623:intron | 45.0% | |
| CCGCAACATCTTCTCGAAAA+AGG | + | chr3.1:36445862-36445881 | MS.gene82623:CDS | 45.0% | |
| CCTTCCACAGCAATTGCAAA+GGG | - | chr3.1:36445962-36445981 | None:intergenic | 45.0% | |
| CTCCAGTTGACACAAATGGT+TGG | - | chr3.1:36447976-36447995 | None:intergenic | 45.0% | |
| CTCTCGCGTATTCTCTACAT+AGG | - | chr3.1:36446431-36446450 | None:intergenic | 45.0% | |
| CTTCTAGCAAAGCACATTGG+TGG | + | chr3.1:36447432-36447451 | MS.gene82623:intron | 45.0% | |
| CTTCTCGAAAAAGGGGATGA+AGG | + | chr3.1:36445871-36445890 | MS.gene82623:CDS | 45.0% | |
| GAACCAGTGATCACAATACC+AGG | - | chr3.1:36444123-36444142 | None:intergenic | 45.0% | |
| GAAGCCTCAATGTGAAGGTT+TGG | - | chr3.1:36447773-36447792 | None:intergenic | 45.0% | |
| GCCCCCATAAAACCTGAAAA+AGG | - | chr3.1:36445815-36445834 | None:intergenic | 45.0% | |
| GCGCAATATAAGTTCGAGGT+AGG | + | chr3.1:36445557-36445576 | MS.gene82623:intron | 45.0% | |
| GCTCCAACAAGTCAGGTTAA+TGG | + | chr3.1:36447060-36447079 | MS.gene82623:intron | 45.0% | |
| GGAAAAGATGGAGGCTCTTT+AGG | + | chr3.1:36447575-36447594 | MS.gene82623:intron | 45.0% | |
| GGGGGCTATGATATCAAATC+TGG | + | chr3.1:36445829-36445848 | MS.gene82623:CDS | 45.0% | |
| GTCCAACCATTTGTGTCAAC+TGG | + | chr3.1:36447971-36447990 | MS.gene82623:intron | 45.0% | |
| GTCGACAAGGAAACTCAGAA+AGG | - | chr3.1:36447720-36447739 | None:intergenic | 45.0% | |
| GTCTTGTGTACGACACTTGT+TGG | + | chr3.1:36447086-36447105 | MS.gene82623:intron | 45.0% | |
| GTTGATGTAAGCCAAGGGTA+AGG | - | chr3.1:36444498-36444517 | None:intergenic | 45.0% | |
| TACGAAGAGGGAATGTGTTG+GGG | + | chr3.1:36447342-36447361 | MS.gene82623:intron | 45.0% | |
| TAGAAGGGTTCACCACTTTG+AGG | - | chr3.1:36447418-36447437 | None:intergenic | 45.0% | |
| TCAACTCTCTCACTTGCTTG+TGG | + | chr3.1:36444513-36444532 | MS.gene82623:CDS | 45.0% | |
| TCAGGTGTCTTACATGTCGT+TGG | + | chr3.1:36446853-36446872 | MS.gene82623:CDS | 45.0% | |
| TCCTTCCACAGCAATTGCAA+AGG | - | chr3.1:36445963-36445982 | None:intergenic | 45.0% | |
| TGAATGCTTACCCTTACCCT+TGG | + | chr3.1:36444484-36444503 | MS.gene82623:CDS | 45.0% | |
| TGGTCCAAACCTTCACATTG+AGG | + | chr3.1:36447766-36447785 | MS.gene82623:intron | 45.0% | |
| TGTGTTTGTGGAGGTTTGTG+GGG | + | chr3.1:36444864-36444883 | MS.gene82623:intron | 45.0% | |
| TTGGACCAAATCATGTGCTC+AGG | - | chr3.1:36447754-36447773 | None:intergenic | 45.0% | |
| ! | AGATCAGAGATTGAAGGTGC+AGG | + | chr3.1:36444363-36444382 | MS.gene82623:CDS | 45.0% |
| ! | CAAAGGGTGTGAGAATTGCA+AGG | - | chr3.1:36445946-36445965 | None:intergenic | 45.0% |
| ! | GTTGCTGTTGCACACACAAT+TGG | + | chr3.1:36445285-36445304 | MS.gene82623:CDS | 45.0% |
| !! | ACTGGTTCTGATGCTGGTTT+AGG | + | chr3.1:36444135-36444154 | MS.gene82623:CDS | 45.0% |
| !! | CTGGTTCTGATGCTGGTTTA+GGG | + | chr3.1:36444136-36444155 | MS.gene82623:CDS | 45.0% |
| !! | GAGAGAGTTGATGTAAGCCA+AGG | - | chr3.1:36444504-36444523 | None:intergenic | 45.0% |
| !! | GTGGTTTGCTCATTACAGGA+AGG | + | chr3.1:36447370-36447389 | MS.gene82623:intron | 45.0% |
| AATTGGACATGTCGCGGCTA+CGG | + | chr3.1:36445302-36445321 | MS.gene82623:CDS | 50.0% | |
| AGATTATCCATGACGCGCGA+TGG | + | chr3.1:36446566-36446585 | MS.gene82623:intron | 50.0% | |
| AGGAGCTTCAGCAATCCTAG+TGG | - | chr3.1:36444565-36444584 | None:intergenic | 50.0% | |
| ATTCAGCCCGTCAATGCTCT+TGG | + | chr3.1:36446965-36446984 | MS.gene82623:CDS | 50.0% | |
| CAAAGCACATTGGTGGAGGA+AGG | + | chr3.1:36447439-36447458 | MS.gene82623:intron | 50.0% | |
| CACACCCTTTGCAATTGCTG+TGG | + | chr3.1:36445955-36445974 | MS.gene82623:CDS | 50.0% | |
| CCCTTTGCAATTGCTGTGGA+AGG | + | chr3.1:36445959-36445978 | MS.gene82623:CDS | 50.0% | |
| CGGGACCTTCTTATACTCTC+AGG | + | chr3.1:36447006-36447025 | MS.gene82623:CDS | 50.0% | |
| CTAGCAAAGCACATTGGTGG+AGG | + | chr3.1:36447435-36447454 | MS.gene82623:intron | 50.0% | |
| GACAGGACAGGAGTTCAACT+TGG | - | chr3.1:36446322-36446341 | None:intergenic | 50.0% | |
| GCAGTTTCCATGTAGGACCT+TGG | + | chr3.1:36447823-36447842 | MS.gene82623:intron | 50.0% | |
| GCGCGAGAAACTCATATGGT+GGG | - | chr3.1:36444825-36444844 | None:intergenic | 50.0% | |
| GCGCGTCATGGATAATCTCT+TGG | - | chr3.1:36446564-36446583 | None:intergenic | 50.0% | |
| GGTAAATGTGCGCAACAGGT+GGG | + | chr3.1:36446796-36446815 | MS.gene82623:intron | 50.0% | |
| GTTACGACACTGTAGCGTAG+AGG | + | chr3.1:36445109-36445128 | MS.gene82623:intron | 50.0% | |
| TGGTAAATGTGCGCAACAGG+TGG | + | chr3.1:36446795-36446814 | MS.gene82623:intron | 50.0% | |
| TGTGGAAGGACCAGCAATGT+GGG | + | chr3.1:36445973-36445992 | MS.gene82623:CDS | 50.0% | |
| TGTTGATCTCTTGGGCCACT+AGG | + | chr3.1:36444547-36444566 | MS.gene82623:CDS | 50.0% | |
| TTGAGTAGTCTCGACAGGAC+AGG | - | chr3.1:36446334-36446353 | None:intergenic | 50.0% | |
| TTGCGCGCGAGAAACTCATA+TGG | - | chr3.1:36444829-36444848 | None:intergenic | 50.0% | |
| ! | AACCCAGGTACTTGATAGCC+AGG | - | chr3.1:36446592-36446611 | None:intergenic | 50.0% |
| ! | GGAATGTGTTGGGGTGTTTG+TGG | + | chr3.1:36447351-36447370 | MS.gene82623:intron | 50.0% |
| !! | AGAGCATTGACGGGCTGAAT+TGG | - | chr3.1:36446965-36446984 | None:intergenic | 50.0% |
| !! | CGAGCCTGCTTTTAGTGTTC+TGG | + | chr3.1:36445374-36445393 | MS.gene82623:CDS | 50.0% |
| !! | GTGATCACTGGTTCTGATGC+TGG | + | chr3.1:36444129-36444148 | MS.gene82623:CDS | 50.0% |
| !! | TGACGGGCTGAATTGGTGTA+TGG | - | chr3.1:36446958-36446977 | None:intergenic | 50.0% |
| AGGTGCAGGAACACCTTCAG+AGG | + | chr3.1:36444377-36444396 | MS.gene82623:CDS | 55.0% | |
| AGTCACAACGGGTGAGCAGA+AGG | + | chr3.1:36447949-36447968 | MS.gene82623:intron | 55.0% | |
| CAGATAGACTGGCACAGGGA+AGG | - | chr3.1:36445424-36445443 | None:intergenic | 55.0% | |
| CGCGCGAGAAACTCATATGG+TGG | - | chr3.1:36444826-36444845 | None:intergenic | 55.0% | |
| CTGCTCACCCGTTGTGACTT+AGG | - | chr3.1:36447948-36447967 | None:intergenic | 55.0% | |
| CTGTGGAAGGACCAGCAATG+TGG | + | chr3.1:36445972-36445991 | MS.gene82623:CDS | 55.0% | |
| GAGCCGCAATTGCTGTCTTC+GGG | + | chr3.1:36446987-36447006 | MS.gene82623:CDS | 55.0% | |
| GCGTGAGAAGCTCATAGGGT+GGG | + | chr3.1:36444929-36444948 | MS.gene82623:intron | 55.0% | |
| GGAGCCGCAATTGCTGTCTT+CGG | + | chr3.1:36446986-36447005 | MS.gene82623:CDS | 55.0% | |
| GGCCTGGCTATCAAGTACCT+GGG | + | chr3.1:36446587-36446606 | MS.gene82623:intron | 55.0% | |
| GGCTGGTAAATGTGCGCAAC+AGG | + | chr3.1:36446792-36446811 | MS.gene82623:intron | 55.0% | |
| GGTCCCGAAGACAGCAATTG+CGG | - | chr3.1:36446993-36447012 | None:intergenic | 55.0% | |
| TATCCAGCAGCCCACATTGC+TGG | - | chr3.1:36445986-36446005 | None:intergenic | 55.0% | |
| TGGCCTGGCTATCAAGTACC+TGG | + | chr3.1:36446586-36446605 | MS.gene82623:intron | 55.0% | |
| !! | TGCGGCTCCAAGAGCATTGA+CGG | - | chr3.1:36446975-36446994 | None:intergenic | 55.0% |
| AGGGCGCGTGAGAAGCTCAT+AGG | + | chr3.1:36444924-36444943 | MS.gene82623:intron | 60.0% | |
| CGCGTGAGAAGCTCATAGGG+TGG | + | chr3.1:36444928-36444947 | MS.gene82623:intron | 60.0% | |
| CTCACGCGCCCTGAGCTATT+CGG | - | chr3.1:36444916-36444935 | None:intergenic | 60.0% | |
| GGGCGCGTGAGAAGCTCATA+GGG | + | chr3.1:36444925-36444944 | MS.gene82623:intron | 60.0% | |
| GGTGTCTGGTGCAGTCGACA+AGG | - | chr3.1:36447733-36447752 | None:intergenic | 60.0% | |
| !! | GCGGCTCCAAGAGCATTGAC+GGG | - | chr3.1:36446974-36446993 | None:intergenic | 60.0% |
| ATCCATGACGCGCGATGGCC+TGG | + | chr3.1:36446571-36446590 | MS.gene82623:intron | 65.0% | |
| ! | GGACCAGCAATGTGGGCTGC+TGG | + | chr3.1:36445980-36445999 | MS.gene82623:CDS | 65.0% |
| AGCCAGGCCATCGCGCGTCA+TGG | - | chr3.1:36446576-36446595 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 36444099 | 36448087 | 36444099 | ID=MS.gene82623 |
| chr3.1 | mRNA | 36444099 | 36448087 | 36444099 | ID=MS.gene82623.t1;Parent=MS.gene82623 |
| chr3.1 | exon | 36444099 | 36444620 | 36444099 | ID=MS.gene82623.t1.exon1;Parent=MS.gene82623.t1 |
| chr3.1 | CDS | 36444099 | 36444620 | 36444099 | ID=cds.MS.gene82623.t1;Parent=MS.gene82623.t1 |
| chr3.1 | exon | 36445285 | 36445510 | 36445285 | ID=MS.gene82623.t1.exon2;Parent=MS.gene82623.t1 |
| chr3.1 | CDS | 36445285 | 36445510 | 36445285 | ID=cds.MS.gene82623.t1;Parent=MS.gene82623.t1 |
| chr3.1 | exon | 36445822 | 36446044 | 36445822 | ID=MS.gene82623.t1.exon3;Parent=MS.gene82623.t1 |
| chr3.1 | CDS | 36445822 | 36446044 | 36445822 | ID=cds.MS.gene82623.t1;Parent=MS.gene82623.t1 |
| chr3.1 | exon | 36446814 | 36447027 | 36446814 | ID=MS.gene82623.t1.exon4;Parent=MS.gene82623.t1 |
| chr3.1 | CDS | 36446814 | 36447027 | 36446814 | ID=cds.MS.gene82623.t1;Parent=MS.gene82623.t1 |
| chr3.1 | exon | 36448076 | 36448087 | 36448076 | ID=MS.gene82623.t1.exon5;Parent=MS.gene82623.t1 |
| chr3.1 | CDS | 36448076 | 36448087 | 36448076 | ID=cds.MS.gene82623.t1;Parent=MS.gene82623.t1 |
| Gene Sequence |
| Protein sequence |
