Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86987.t1 | XP_024631881.1 | 91.4 | 162 | 14 | 0 | 40 | 201 | 19 | 180 | 6.10E-78 | 300.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86987.t1 | Q9M8N2 | 45.7 | 92 | 40 | 1 | 103 | 194 | 111 | 192 | 3.8e-20 | 99.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86987.t1 | A0A396JJW4 | 91.4 | 162 | 14 | 0 | 40 | 201 | 19 | 180 | 4.4e-78 | 300.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049382 | MS.gene86987 | 0.814562 | 1.45E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene86987 | 0.803978 | 2.69E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene86987 | 0.810889 | 9.21E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene86987 | 0.800574 | 1.35E-48 | -1.69E-46 |
| MS.gene050438 | MS.gene86987 | 0.811591 | 6.49E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene86987 | -0.802524 | 5.39E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene86987 | 0.810611 | 1.06E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene86987 | 0.811122 | 8.20E-51 | -1.69E-46 |
| MS.gene051626 | MS.gene86987 | 0.805296 | 1.43E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene86987 | 0.800616 | 1.33E-48 | -1.69E-46 |
| MS.gene051789 | MS.gene86987 | 0.829946 | 3.87E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene86987 | 0.80797 | 3.90E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene86987 | 0.801738 | 7.82E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene86987 | 0.822242 | 2.63E-53 | -1.69E-46 |
| MS.gene052858 | MS.gene86987 | 0.803733 | 3.03E-49 | -1.69E-46 |
| MS.gene052860 | MS.gene86987 | 0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene053074 | MS.gene86987 | 0.813635 | 2.32E-51 | -1.69E-46 |
| MS.gene054184 | MS.gene86987 | 0.803773 | 2.97E-49 | -1.69E-46 |
| MS.gene054185 | MS.gene86987 | 0.809609 | 1.74E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene86987 | 0.81044 | 1.15E-50 | -1.69E-46 |
| MS.gene054596 | MS.gene86987 | 0.814227 | 1.72E-51 | -1.69E-46 |
| MS.gene055133 | MS.gene86987 | 0.812228 | 4.71E-51 | -1.69E-46 |
| MS.gene056069 | MS.gene86987 | -0.81579 | 7.72E-52 | -1.69E-46 |
| MS.gene056589 | MS.gene86987 | 0.814518 | 1.48E-51 | -1.69E-46 |
| MS.gene056760 | MS.gene86987 | 0.801879 | 7.31E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene86987 | 0.819706 | 1.01E-52 | -1.69E-46 |
| MS.gene058168 | MS.gene86987 | 0.802211 | 6.25E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene86987 | 0.809617 | 1.73E-50 | -1.69E-46 |
| MS.gene060320 | MS.gene86987 | 0.824572 | 7.51E-54 | -1.69E-46 |
| MS.gene060476 | MS.gene86987 | 0.80027 | 1.56E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86987.t1 | MTR_2g104810 | 88.119 | 101 | 12 | 0 | 40 | 140 | 19 | 119 | 2.75e-62 | 190 |
| MS.gene86987.t1 | MTR_4g116860 | 49.451 | 91 | 35 | 1 | 107 | 197 | 1542 | 1621 | 4.64e-18 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86987.t1 | AT1G80650 | 45.652 | 92 | 40 | 1 | 103 | 194 | 111 | 192 | 2.99e-18 | 79.3 |
| MS.gene86987.t1 | AT4G00420 | 44.330 | 97 | 43 | 3 | 103 | 199 | 59 | 144 | 2.29e-16 | 73.6 |
| MS.gene86987.t1 | AT4G00420 | 44.330 | 97 | 43 | 3 | 103 | 199 | 80 | 165 | 3.64e-16 | 73.6 |
| MS.gene86987.t1 | AT4G00420 | 44.330 | 97 | 43 | 3 | 103 | 199 | 81 | 166 | 3.71e-16 | 73.6 |
| MS.gene86987.t1 | AT4G00420 | 44.330 | 97 | 43 | 3 | 103 | 199 | 81 | 166 | 3.71e-16 | 73.6 |
| MS.gene86987.t1 | AT4G00420 | 44.330 | 97 | 43 | 3 | 103 | 199 | 81 | 166 | 3.71e-16 | 73.6 |
| MS.gene86987.t1 | AT5G20320 | 39.823 | 113 | 57 | 1 | 85 | 197 | 1586 | 1687 | 6.84e-15 | 73.2 |
| MS.gene86987.t1 | AT5G20320 | 39.823 | 113 | 57 | 1 | 85 | 197 | 1375 | 1476 | 7.29e-15 | 72.8 |
| MS.gene86987.t1 | AT5G20320 | 39.823 | 113 | 57 | 1 | 85 | 197 | 1600 | 1701 | 7.32e-15 | 72.8 |
| MS.gene86987.t1 | AT1G80650 | 39.130 | 92 | 36 | 1 | 103 | 194 | 111 | 182 | 9.35e-12 | 61.6 |
Find 24 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTAAAATGACACTCTCTT+TGG | 0.292490 | 2.3:-205196 | None:intergenic |
| CTTGAATAATCAAATGAAAA+TGG | 0.300650 | 2.3:+205098 | MS.gene86987:CDS |
| ATTCAAGGTTATTGTTGAAA+TGG | 0.336999 | 2.3:+206356 | MS.gene86987:CDS |
| TTCATTTGATTATTCAAGTT+GGG | 0.380029 | 2.3:-205093 | None:intergenic |
| TTCTTCTCACTCCACCTTCA+AGG | 0.388623 | 2.3:+204922 | MS.gene86987:CDS |
| TGTTTGTTAGGTATGAAGAA+AGG | 0.445413 | 2.3:+205344 | MS.gene86987:intron |
| TTGTGGTACTTAAAGCATAT+AGG | 0.446945 | 2.3:+206498 | MS.gene86987:CDS |
| GTTTGTTAGGTATGAAGAAA+GGG | 0.447288 | 2.3:+205345 | MS.gene86987:intron |
| TTTCATTTGATTATTCAAGT+TGG | 0.449161 | 2.3:-205094 | None:intergenic |
| TGGAAGATGAAACTGAAGAT+TGG | 0.449737 | 2.3:-205176 | None:intergenic |
| GTTATTGTTGAAATGGAGAC+AGG | 0.475716 | 2.3:+206363 | MS.gene86987:CDS |
| AGACATGTGCTGTAAATCAT+TGG | 0.504933 | 2.3:+205390 | MS.gene86987:CDS |
| GGCAGCAGACAATGCAGCCG+AGG | 0.547846 | 2.3:+206470 | MS.gene86987:CDS |
| TAAGTACCACAATGCACCCT+CGG | 0.553491 | 2.3:-206487 | None:intergenic |
| AAGACAACAACTTCAGATGA+AGG | 0.557587 | 2.3:+205219 | MS.gene86987:CDS |
| TTAGGTATGAAGAAAGGGTG+TGG | 0.557962 | 2.3:+205350 | MS.gene86987:intron |
| TGTGTTTGAGTGTTGTAAAG+AGG | 0.558213 | 2.3:+205421 | MS.gene86987:CDS |
| GCAGCAGACAATGCAGCCGA+GGG | 0.565055 | 2.3:+206471 | MS.gene86987:CDS |
| TCTTTACAACACTCAAACAC+AGG | 0.578805 | 2.3:-205419 | None:intergenic |
| ATTATACACAATACAAAACA+TGG | 0.645969 | 2.3:+204886 | MS.gene86987:CDS |
| TTTGAGTGTTGTAAAGAGGA+AGG | 0.648639 | 2.3:+205425 | MS.gene86987:CDS |
| TTACAACACTCAAACACAGG+AGG | 0.658087 | 2.3:-205416 | None:intergenic |
| ACTTACATTATGCAATGACA+TGG | 0.673466 | 2.3:-205449 | None:intergenic |
| ATGCAGCCGAGGGTGCATTG+TGG | 0.682343 | 2.3:+206481 | MS.gene86987:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTAAAATAAATAATT+GGG | + | chr2.3:204969-204988 | MS.gene86987:intron | 0.0% |
| !!! | TTTTAATTAAAATAAATAAT+TGG | + | chr2.3:204968-204987 | MS.gene86987:intron | 0.0% |
| !!! | TTTTATTTATGAAAAATGAA+GGG | + | chr2.3:205474-205493 | MS.gene86987:intron | 10.0% |
| !!! | TTTTTATTTATGAAAAATGA+AGG | + | chr2.3:205473-205492 | MS.gene86987:intron | 10.0% |
| !! | AAAAAAAATTATTACCTTGA+AGG | - | chr2.3:204939-204958 | None:intergenic | 15.0% |
| !!! | ACAAAAAAAATGAACTTTTT+TGG | - | chr2.3:205274-205293 | None:intergenic | 15.0% |
| !! | ATATAAACAACTTACAACTT+AGG | + | chr2.3:205713-205732 | MS.gene86987:intron | 20.0% |
| !! | ATTATACACAATACAAAACA+TGG | + | chr2.3:204886-204905 | MS.gene86987:CDS | 20.0% |
| !! | CTTGAATAATCAAATGAAAA+TGG | + | chr2.3:205098-205117 | MS.gene86987:CDS | 20.0% |
| !! | TCATTATGAATTGTAGAAAA+GGG | - | chr2.3:206266-206285 | None:intergenic | 20.0% |
| !! | TTCATTATGAATTGTAGAAA+AGG | - | chr2.3:206267-206286 | None:intergenic | 20.0% |
| !! | TTTCATTTGATTATTCAAGT+TGG | - | chr2.3:205097-205116 | None:intergenic | 20.0% |
| !!! | AATGAGAAAAATGAGTATTT+TGG | + | chr2.3:205315-205334 | MS.gene86987:intron | 20.0% |
| !!! | GAAATGAAATTTTCTATAAG+TGG | + | chr2.3:205522-205541 | MS.gene86987:intron | 20.0% |
| !!! | TTCATTTGATTATTCAAGTT+GGG | - | chr2.3:205096-205115 | None:intergenic | 20.0% |
| !!! | TTTTGGTATTATTGTTTGTT+AGG | + | chr2.3:205332-205351 | MS.gene86987:intron | 20.0% |
| ! | AAAAACATTGTAGAGGTTTA+TGG | + | chr2.3:206423-206442 | MS.gene86987:CDS | 25.0% |
| ! | AAAAATTATTACCTTGAAGG+TGG | - | chr2.3:204936-204955 | None:intergenic | 25.0% |
| ! | AAAAGTTTATGCTGCAAAAA+TGG | + | chr2.3:205065-205084 | MS.gene86987:CDS | 25.0% |
| ! | AAAGGGAAGCAAAATATAAT+AGG | - | chr2.3:206249-206268 | None:intergenic | 25.0% |
| ! | AATATTGCAAAAGATTTAGC+TGG | - | chr2.3:206139-206158 | None:intergenic | 25.0% |
| ! | AATGAAGGGAAAAAAAACTA+TGG | + | chr2.3:205488-205507 | MS.gene86987:intron | 25.0% |
| ! | ATTCAAGGTTATTGTTGAAA+TGG | + | chr2.3:206356-206375 | MS.gene86987:CDS | 25.0% |
| ! | GGAAAACATGCAATAATTAA+TGG | - | chr2.3:205253-205272 | None:intergenic | 25.0% |
| ! | TCATGCAATAAGACAAATAT+TGG | - | chr2.3:206222-206241 | None:intergenic | 25.0% |
| ! | TCCTCATCAAAAAAAGAAAA+TGG | + | chr2.3:206449-206468 | MS.gene86987:CDS | 25.0% |
| ! | TCTACAATTCATAATGAAAC+TGG | + | chr2.3:206269-206288 | MS.gene86987:intron | 25.0% |
| ! | TCTCAAATTATTAACAGTGT+CGG | + | chr2.3:205902-205921 | MS.gene86987:intron | 25.0% |
| !! | ATAAACCTCTACAATGTTTT+TGG | - | chr2.3:206424-206443 | None:intergenic | 25.0% |
| AACCTGTGAAAAACATCAAT+TGG | - | chr2.3:206333-206352 | None:intergenic | 30.0% | |
| AAGATTATTCCATTGCATGT+TGG | + | chr2.3:206110-206129 | MS.gene86987:intron | 30.0% | |
| ACAATTCATAATGAAACTGG+AGG | + | chr2.3:206272-206291 | MS.gene86987:intron | 30.0% | |
| ACTTACATTATGCAATGACA+TGG | - | chr2.3:205452-205471 | None:intergenic | 30.0% | |
| AGTAACCAAAAACATTGTAG+AGG | + | chr2.3:206416-206435 | MS.gene86987:CDS | 30.0% | |
| TTAGAAGATGCATAGATTAG+TGG | + | chr2.3:205747-205766 | MS.gene86987:intron | 30.0% | |
| TTGTGGTACTTAAAGCATAT+AGG | + | chr2.3:206498-206517 | MS.gene86987:CDS | 30.0% | |
| ! | AAGTGGTATATTTTGTGTGT+TGG | + | chr2.3:205539-205558 | MS.gene86987:intron | 30.0% |
| ! | GACAAATATTGGTTGATATC+TGG | - | chr2.3:206211-206230 | None:intergenic | 30.0% |
| ! | GTTTGTTAGGTATGAAGAAA+GGG | + | chr2.3:205345-205364 | MS.gene86987:intron | 30.0% |
| ! | TGTTTGTTAGGTATGAAGAA+AGG | + | chr2.3:205344-205363 | MS.gene86987:intron | 30.0% |
| ! | TTGCAGCATAAACTTTTGTT+CGG | - | chr2.3:205062-205081 | None:intergenic | 30.0% |
| ! | TTTTCACAGGTTTACATTCA+AGG | + | chr2.3:206341-206360 | MS.gene86987:intron | 30.0% |
| !!! | GCCATTTTCTTTTTTTGATG+AGG | - | chr2.3:206453-206472 | None:intergenic | 30.0% |
| AAGACAACAACTTCAGATGA+AGG | + | chr2.3:205219-205238 | MS.gene86987:CDS | 35.0% | |
| AGACATGTGCTGTAAATCAT+TGG | + | chr2.3:205390-205409 | MS.gene86987:CDS | 35.0% | |
| GTTATTGTTGAAATGGAGAC+AGG | + | chr2.3:206363-206382 | MS.gene86987:CDS | 35.0% | |
| TCAGCTGTAGATTTCAAATC+AGG | + | chr2.3:205683-205702 | MS.gene86987:intron | 35.0% | |
| TCTTTACAACACTCAAACAC+AGG | - | chr2.3:205422-205441 | None:intergenic | 35.0% | |
| TGGAAGATGAAACTGAAGAT+TGG | - | chr2.3:205179-205198 | None:intergenic | 35.0% | |
| ! | GACCAATTGATGTTTTTCAC+AGG | + | chr2.3:206328-206347 | MS.gene86987:intron | 35.0% |
| ! | TGTGTTTGAGTGTTGTAAAG+AGG | + | chr2.3:205421-205440 | MS.gene86987:CDS | 35.0% |
| ! | TTTGAGTGTTGTAAAGAGGA+AGG | + | chr2.3:205425-205444 | MS.gene86987:CDS | 35.0% |
| ! | TTTTTCGCTGTGCGATTATA+GGG | + | chr2.3:205637-205656 | MS.gene86987:intron | 35.0% |
| !!! | CCAAAGAGAGTGTCATTTTA+GGG | + | chr2.3:205196-205215 | MS.gene86987:CDS | 35.0% |
| !!! | GCATCAATGTTTTTCAAGAC+TGG | - | chr2.3:205153-205172 | None:intergenic | 35.0% |
| !!! | TCCAAAGAGAGTGTCATTTT+AGG | + | chr2.3:205195-205214 | MS.gene86987:CDS | 35.0% |
| !!! | TTTTTTCGCTGTGCGATTAT+AGG | + | chr2.3:205636-205655 | MS.gene86987:intron | 35.0% |
| CCCTAAAATGACACTCTCTT+TGG | - | chr2.3:205199-205218 | None:intergenic | 40.0% | |
| GATGTTAGAGCCTAGTGTTT+CGG | - | chr2.3:206058-206077 | None:intergenic | 40.0% | |
| TATATGTGTCAGTGTCGTGT+CGG | - | chr2.3:205860-205879 | None:intergenic | 40.0% | |
| TATGTGCTTGAGTGCTTCAT+AGG | - | chr2.3:205788-205807 | None:intergenic | 40.0% | |
| TTACAACACTCAAACACAGG+AGG | - | chr2.3:205419-205438 | None:intergenic | 40.0% | |
| TTAGGTATGAAGAAAGGGTG+TGG | + | chr2.3:205350-205369 | MS.gene86987:intron | 40.0% | |
| ! | GACGTTTTATGCAGGTATCT+GGG | - | chr2.3:206029-206048 | None:intergenic | 40.0% |
| ACTCAAGCACATACACTCCT+CGG | + | chr2.3:205795-205814 | MS.gene86987:intron | 45.0% | |
| AGCTGGATACCAACATGCAA+TGG | - | chr2.3:206122-206141 | None:intergenic | 45.0% | |
| ATGAAGCACGGATATGGACA+CGG | - | chr2.3:205957-205976 | None:intergenic | 45.0% | |
| CTGTGCGATTATAGGGAAAC+TGG | + | chr2.3:205644-205663 | MS.gene86987:intron | 45.0% | |
| TAAGTACCACAATGCACCCT+CGG | - | chr2.3:206490-206509 | None:intergenic | 45.0% | |
| TGAGTGCTTCATAGGTGTGT+GGG | - | chr2.3:205780-205799 | None:intergenic | 45.0% | |
| TTCATAGCCACACACAGACA+CGG | + | chr2.3:205972-205991 | MS.gene86987:intron | 45.0% | |
| TTCTTCTCACTCCACCTTCA+AGG | + | chr2.3:204922-204941 | MS.gene86987:CDS | 45.0% | |
| TTGAGTGCTTCATAGGTGTG+TGG | - | chr2.3:205781-205800 | None:intergenic | 45.0% | |
| ! | GGACGTTTTATGCAGGTATC+TGG | - | chr2.3:206030-206049 | None:intergenic | 45.0% |
| !!! | TTGTTTTTTTTTTTTTAAAT+TGG | + | chr2.3:205003-205022 | MS.gene86987:intron | 5.0% |
| ACGGATATGGACACGGAAAC+CGG | - | chr2.3:205950-205969 | None:intergenic | 50.0% | |
| CTGTGTGTGGCTATGAAGCA+CGG | - | chr2.3:205969-205988 | None:intergenic | 50.0% | |
| GCACATACACTCCTCGGATT+AGG | + | chr2.3:205801-205820 | MS.gene86987:intron | 50.0% | |
| GTGGCTATGAAGCACGGATA+TGG | - | chr2.3:205963-205982 | None:intergenic | 50.0% | |
| TTCATAGGTGTGTGGGCACT+AGG | - | chr2.3:205773-205792 | None:intergenic | 50.0% | |
| ! | GGAGTGTGGACGTTTTATGC+AGG | - | chr2.3:206037-206056 | None:intergenic | 50.0% |
| AGGTATCTGGGCTTGATCCC+AGG | - | chr2.3:206017-206036 | None:intergenic | 55.0% | |
| CGTCCACACTCCGAAACACT+AGG | + | chr2.3:206045-206064 | MS.gene86987:intron | 55.0% | |
| GAGCCTAGTGTTTCGGAGTG+TGG | - | chr2.3:206051-206070 | None:intergenic | 55.0% | |
| GTCAGTATGCGTGTCGTGTC+CGG | + | chr2.3:205928-205947 | MS.gene86987:intron | 55.0% | |
| ! | TGTCAGTGTCGTGTCGGTGT+TGG | - | chr2.3:205854-205873 | None:intergenic | 55.0% |
| ACACGACACCTGTCCGACAC+CGG | - | chr2.3:205831-205850 | None:intergenic | 60.0% | |
| ACAGACACGGAGAGGGGGAA+GGG | + | chr2.3:205985-206004 | MS.gene86987:intron | 60.0% | |
| AGCCACACACAGACACGGAG+AGG | + | chr2.3:205977-205996 | MS.gene86987:intron | 60.0% | |
| AGGGGGAAGGGTGGAAACCT+GGG | + | chr2.3:205997-206016 | MS.gene86987:intron | 60.0% | |
| CACACACAGACACGGAGAGG+GGG | + | chr2.3:205980-205999 | MS.gene86987:intron | 60.0% | |
| CCACACACAGACACGGAGAG+GGG | + | chr2.3:205979-205998 | MS.gene86987:intron | 60.0% | |
| GCAGCAGACAATGCAGCCGA+GGG | + | chr2.3:206471-206490 | MS.gene86987:CDS | 60.0% | |
| GCCACACACAGACACGGAGA+GGG | + | chr2.3:205978-205997 | MS.gene86987:intron | 60.0% | |
| ! | ACTCCTCGGATTAGGCGTCC+CGG | + | chr2.3:205809-205828 | MS.gene86987:intron | 60.0% |
| ! | ATGCAGCCGAGGGTGCATTG+TGG | + | chr2.3:206481-206500 | MS.gene86987:CDS | 60.0% |
| ACACCGGGACGCCTAATCCG+AGG | - | chr2.3:205815-205834 | None:intergenic | 65.0% | |
| CACAGACACGGAGAGGGGGA+AGG | + | chr2.3:205984-206003 | MS.gene86987:intron | 65.0% | |
| CACGACACCTGTCCGACACC+GGG | - | chr2.3:205830-205849 | None:intergenic | 65.0% | |
| CCCCTCTCCGTGTCTGTGTG+TGG | - | chr2.3:205982-206001 | None:intergenic | 65.0% | |
| GAGGGGGAAGGGTGGAAACC+TGG | + | chr2.3:205996-206015 | MS.gene86987:intron | 65.0% | |
| GGCAGCAGACAATGCAGCCG+AGG | + | chr2.3:206470-206489 | MS.gene86987:CDS | 65.0% | |
| ! | CGGATTAGGCGTCCCGGTGT+CGG | + | chr2.3:205815-205834 | MS.gene86987:intron | 65.0% |
| GACACGGAGAGGGGGAAGGG+TGG | + | chr2.3:205988-206007 | MS.gene86987:intron | 70.0% | |
| ! | TAGGCGTCCCGGTGTCGGAC+AGG | + | chr2.3:205820-205839 | MS.gene86987:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 204831 | 206542 | 204831 | ID=MS.gene86987 |
| chr2.3 | mRNA | 204831 | 206542 | 204831 | ID=MS.gene86987.t1;Parent=MS.gene86987 |
| chr2.3 | exon | 204831 | 204943 | 204831 | ID=MS.gene86987.t1.exon1;Parent=MS.gene86987.t1 |
| chr2.3 | CDS | 204831 | 204943 | 204831 | ID=cds.MS.gene86987.t1;Parent=MS.gene86987.t1 |
| chr2.3 | exon | 205053 | 205240 | 205053 | ID=MS.gene86987.t1.exon2;Parent=MS.gene86987.t1 |
| chr2.3 | CDS | 205053 | 205240 | 205053 | ID=cds.MS.gene86987.t1;Parent=MS.gene86987.t1 |
| chr2.3 | exon | 205354 | 205465 | 205354 | ID=MS.gene86987.t1.exon3;Parent=MS.gene86987.t1 |
| chr2.3 | CDS | 205354 | 205465 | 205354 | ID=cds.MS.gene86987.t1;Parent=MS.gene86987.t1 |
| chr2.3 | exon | 206350 | 206542 | 206350 | ID=MS.gene86987.t1.exon4;Parent=MS.gene86987.t1 |
| chr2.3 | CDS | 206350 | 206542 | 206350 | ID=cds.MS.gene86987.t1;Parent=MS.gene86987.t1 |
| Gene Sequence |
| Protein sequence |
