Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89505.t1 | AES97977.1 | 89.8 | 786 | 61 | 4 | 1 | 768 | 1 | 785 | 0.00E+00 | 1419.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89505.t1 | Q9SGZ5 | 61.2 | 756 | 264 | 10 | 32 | 768 | 22 | 767 | 1.0e-270 | 934.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89505.t1 | G7KA75 | 89.8 | 786 | 61 | 4 | 1 | 768 | 1 | 785 | 0.0e+00 | 1419.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene071952 | MS.gene89505 | PPI |
| MS.gene89505 | MS.gene072706 | PPI |
| MS.gene89505 | MS.gene20846 | PPI |
| MS.gene047087 | MS.gene89505 | PPI |
| MS.gene35037 | MS.gene89505 | PPI |
| MS.gene051339 | MS.gene89505 | PPI |
| MS.gene89505 | MS.gene036268 | PPI |
| MS.gene07041 | MS.gene89505 | PPI |
| MS.gene56021 | MS.gene89505 | PPI |
| MS.gene01140 | MS.gene89505 | PPI |
| MS.gene89505 | MS.gene025671 | PPI |
| MS.gene028420 | MS.gene89505 | PPI |
| MS.gene068643 | MS.gene89505 | PPI |
| MS.gene89505 | MS.gene069177 | PPI |
| MS.gene89505 | MS.gene71615 | PPI |
| MS.gene00195 | MS.gene89505 | PPI |
| MS.gene70386 | MS.gene89505 | PPI |
| MS.gene058203 | MS.gene89505 | PPI |
| MS.gene28801 | MS.gene89505 | PPI |
| MS.gene07274 | MS.gene89505 | PPI |
| MS.gene027856 | MS.gene89505 | PPI |
| MS.gene96691 | MS.gene89505 | PPI |
| MS.gene89505 | MS.gene005527 | PPI |
| MS.gene89505 | MS.gene91308 | PPI |
| MS.gene89505 | MS.gene002171 | PPI |
| MS.gene86920 | MS.gene89505 | PPI |
| MS.gene89505 | MS.gene20796 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89505.t1 | MTR_5g062650 | 89.822 | 786 | 61 | 4 | 1 | 768 | 1 | 785 | 0.0 | 1441 |
| MS.gene89505.t1 | MTR_5g062430 | 84.478 | 786 | 100 | 6 | 1 | 768 | 1 | 782 | 0.0 | 1351 |
| MS.gene89505.t1 | MTR_5g062320 | 81.401 | 785 | 124 | 7 | 1 | 768 | 1 | 780 | 0.0 | 1303 |
| MS.gene89505.t1 | MTR_5g062370 | 81.505 | 784 | 123 | 6 | 1 | 766 | 1 | 780 | 0.0 | 1292 |
| MS.gene89505.t1 | MTR_3g074060 | 69.604 | 783 | 211 | 7 | 4 | 768 | 3 | 776 | 0.0 | 1143 |
| MS.gene89505.t1 | MTR_5g062370 | 79.492 | 590 | 100 | 5 | 1 | 572 | 1 | 587 | 0.0 | 955 |
| MS.gene89505.t1 | MTR_5g030860 | 47.870 | 798 | 370 | 15 | 1 | 768 | 1 | 782 | 0.0 | 727 |
| MS.gene89505.t1 | MTR_1g106860 | 47.125 | 800 | 358 | 18 | 3 | 768 | 4 | 772 | 0.0 | 696 |
| MS.gene89505.t1 | MTR_7g109390 | 46.348 | 753 | 365 | 14 | 34 | 766 | 28 | 761 | 0.0 | 686 |
| MS.gene89505.t1 | MTR_1g087240 | 46.552 | 754 | 363 | 13 | 33 | 766 | 22 | 755 | 0.0 | 685 |
| MS.gene89505.t1 | MTR_2g034720 | 46.871 | 751 | 356 | 14 | 33 | 764 | 26 | 752 | 0.0 | 676 |
| MS.gene89505.t1 | MTR_2g008240 | 46.640 | 759 | 358 | 16 | 34 | 768 | 40 | 775 | 0.0 | 675 |
| MS.gene89505.t1 | MTR_4g094285 | 45.288 | 764 | 361 | 17 | 34 | 768 | 39 | 774 | 0.0 | 662 |
| MS.gene89505.t1 | MTR_3g462820 | 28.286 | 601 | 331 | 26 | 48 | 581 | 22 | 589 | 8.23e-39 | 153 |
| MS.gene89505.t1 | MTR_7g086030 | 26.900 | 658 | 336 | 29 | 48 | 624 | 4 | 597 | 9.69e-38 | 150 |
| MS.gene89505.t1 | MTR_5g069800 | 26.555 | 595 | 350 | 21 | 50 | 583 | 7 | 575 | 1.45e-37 | 149 |
| MS.gene89505.t1 | MTR_7g086030 | 26.900 | 658 | 336 | 29 | 48 | 624 | 29 | 622 | 2.03e-37 | 149 |
| MS.gene89505.t1 | MTR_6g028120 | 27.987 | 636 | 337 | 31 | 58 | 624 | 19 | 602 | 7.70e-37 | 147 |
| MS.gene89505.t1 | MTR_6g028090 | 27.987 | 636 | 337 | 29 | 58 | 624 | 38 | 621 | 3.97e-36 | 145 |
| MS.gene89505.t1 | MTR_6g028100 | 26.783 | 631 | 351 | 30 | 58 | 624 | 38 | 621 | 1.19e-33 | 137 |
| MS.gene89505.t1 | MTR_6g028110 | 25.960 | 651 | 369 | 28 | 58 | 642 | 39 | 642 | 1.52e-33 | 138 |
| MS.gene89505.t1 | MTR_2g030000 | 26.979 | 619 | 331 | 28 | 58 | 599 | 40 | 614 | 2.23e-33 | 137 |
| MS.gene89505.t1 | MTR_6g028110 | 26.142 | 635 | 358 | 27 | 58 | 628 | 39 | 626 | 3.33e-33 | 136 |
| MS.gene89505.t1 | MTR_3g079750 | 25.271 | 645 | 357 | 28 | 57 | 630 | 37 | 627 | 3.02e-32 | 133 |
| MS.gene89505.t1 | MTR_5g069740 | 26.990 | 578 | 341 | 23 | 58 | 583 | 15 | 563 | 3.34e-32 | 133 |
| MS.gene89505.t1 | MTR_7g086010 | 25.556 | 450 | 235 | 18 | 48 | 422 | 29 | 453 | 2.40e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89505.t1 | AT1G78060 | 61.243 | 756 | 264 | 10 | 32 | 768 | 22 | 767 | 0.0 | 945 |
| MS.gene89505.t1 | AT5G10560 | 47.184 | 799 | 377 | 12 | 4 | 766 | 1 | 790 | 0.0 | 741 |
| MS.gene89505.t1 | AT3G19620 | 49.333 | 750 | 337 | 18 | 34 | 758 | 27 | 758 | 0.0 | 713 |
| MS.gene89505.t1 | AT5G09730 | 47.765 | 783 | 364 | 17 | 11 | 768 | 11 | 773 | 0.0 | 701 |
| MS.gene89505.t1 | AT1G02640 | 46.401 | 778 | 370 | 16 | 8 | 766 | 9 | 758 | 0.0 | 696 |
| MS.gene89505.t1 | AT5G64570 | 46.819 | 786 | 376 | 15 | 7 | 768 | 17 | 784 | 0.0 | 689 |
| MS.gene89505.t1 | AT5G49360 | 46.745 | 768 | 361 | 19 | 22 | 764 | 24 | 768 | 0.0 | 668 |
| MS.gene89505.t1 | AT5G64570 | 47.352 | 642 | 299 | 13 | 150 | 768 | 1 | 626 | 0.0 | 569 |
| MS.gene89505.t1 | AT5G64570 | 49.658 | 584 | 267 | 10 | 7 | 573 | 17 | 590 | 0.0 | 563 |
| MS.gene89505.t1 | AT5G09700 | 44.351 | 478 | 252 | 9 | 297 | 768 | 57 | 526 | 1.32e-125 | 385 |
| MS.gene89505.t1 | AT3G47000 | 26.357 | 645 | 363 | 28 | 45 | 624 | 7 | 604 | 5.51e-39 | 154 |
| MS.gene89505.t1 | AT3G47040 | 26.439 | 643 | 365 | 28 | 48 | 627 | 10 | 607 | 2.55e-38 | 152 |
| MS.gene89505.t1 | AT3G47050 | 26.821 | 604 | 347 | 26 | 44 | 583 | 6 | 578 | 1.14e-36 | 147 |
| MS.gene89505.t1 | AT3G47010 | 26.052 | 618 | 365 | 27 | 45 | 599 | 8 | 596 | 1.18e-36 | 147 |
| MS.gene89505.t1 | AT3G47010 | 26.052 | 618 | 364 | 28 | 45 | 599 | 8 | 595 | 1.68e-35 | 143 |
| MS.gene89505.t1 | AT3G47040 | 25.225 | 666 | 377 | 29 | 44 | 627 | 6 | 632 | 3.05e-34 | 139 |
| MS.gene89505.t1 | AT5G04885 | 26.142 | 635 | 331 | 31 | 54 | 603 | 36 | 617 | 4.10e-34 | 139 |
| MS.gene89505.t1 | AT5G04885 | 26.142 | 635 | 331 | 31 | 54 | 603 | 36 | 617 | 4.10e-34 | 139 |
| MS.gene89505.t1 | AT5G04885 | 26.142 | 635 | 331 | 31 | 54 | 603 | 53 | 634 | 4.74e-34 | 139 |
| MS.gene89505.t1 | AT3G62710 | 26.471 | 612 | 334 | 29 | 60 | 623 | 105 | 648 | 2.21e-31 | 131 |
| MS.gene89505.t1 | AT5G20950 | 25.424 | 649 | 344 | 28 | 58 | 628 | 114 | 700 | 5.66e-31 | 130 |
| MS.gene89505.t1 | AT5G20950 | 25.424 | 649 | 344 | 28 | 58 | 628 | 36 | 622 | 5.96e-31 | 129 |
| MS.gene89505.t1 | AT5G20950 | 25.424 | 649 | 344 | 28 | 58 | 628 | 36 | 622 | 5.96e-31 | 129 |
| MS.gene89505.t1 | AT3G47000 | 27.460 | 437 | 239 | 17 | 45 | 421 | 7 | 425 | 1.49e-29 | 123 |
| MS.gene89505.t1 | AT3G47040 | 27.523 | 436 | 242 | 16 | 44 | 421 | 6 | 425 | 3.98e-29 | 122 |
| MS.gene89505.t1 | AT5G20940 | 25.234 | 642 | 342 | 26 | 58 | 623 | 42 | 621 | 7.54e-29 | 123 |
| MS.gene89505.t1 | AT3G47010 | 27.455 | 448 | 244 | 19 | 45 | 433 | 8 | 433 | 2.61e-27 | 116 |
| MS.gene89505.t1 | AT3G47040 | 24.372 | 677 | 377 | 30 | 44 | 627 | 6 | 640 | 8.04e-26 | 114 |
| MS.gene89505.t1 | AT3G47000 | 26.190 | 462 | 273 | 22 | 194 | 624 | 3 | 427 | 5.63e-24 | 106 |
| MS.gene89505.t1 | AT3G47010 | 25.459 | 436 | 270 | 21 | 196 | 599 | 5 | 417 | 2.07e-22 | 101 |
| MS.gene89505.t1 | AT3G47050 | 27.493 | 371 | 205 | 14 | 44 | 361 | 6 | 365 | 1.03e-21 | 98.6 |
Find 178 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATGGAATTTGTCGATTT+TGG | 0.113456 | 5.4:-48959220 | None:intergenic |
| CTGCCTATGATTTGGATAAT+TGG | 0.143713 | 5.4:+48956047 | MS.gene89505:CDS |
| CACCAAACATAAACATATTT+AGG | 0.158019 | 5.4:+48955864 | MS.gene89505:CDS |
| ACAAATTCCATTGTAGTTAT+AGG | 0.209782 | 5.4:+48959229 | MS.gene89505:CDS |
| GTCTAAAAGACCGGTTATTT+TGG | 0.211602 | 5.4:+48959555 | MS.gene89505:CDS |
| TCTTCATCACAAGTTGTTCT+AGG | 0.218090 | 5.4:+48959265 | MS.gene89505:CDS |
| TTTCCATTTCTACCTTTCTT+TGG | 0.223144 | 5.4:-48960551 | None:intergenic |
| GCTAAGGTTGATGACAAAAT+TGG | 0.235556 | 5.4:+48959613 | MS.gene89505:CDS |
| AAGCAGAAGGGATGACGTTT+TGG | 0.256760 | 5.4:+48955840 | MS.gene89505:CDS |
| TCTTGCCCTCTTCCCCATCT+TGG | 0.264739 | 5.4:-48955890 | None:intergenic |
| TTAGGTCACTTTGCAAGATT+TGG | 0.269798 | 5.4:+48956459 | MS.gene89505:intron |
| TGATTATGTTGTGTTGGTTA+TGG | 0.286519 | 5.4:+48959438 | MS.gene89505:CDS |
| ACACTTTACTGCCTATGATT+TGG | 0.287027 | 5.4:+48956039 | MS.gene89505:CDS |
| AACCCCACCAACTGTTTCAT+TGG | 0.298039 | 5.4:-48960575 | None:intergenic |
| TTGCACGGCGTTGCAGATTA+TGG | 0.298346 | 5.4:+48955034 | MS.gene89505:CDS |
| AAACTGAAATATGGTAAAAT+TGG | 0.329503 | 5.4:+48959097 | MS.gene89505:CDS |
| AATCCAACCAAACTGAAATA+TGG | 0.335707 | 5.4:+48959088 | MS.gene89505:CDS |
| GATTATGTTGTGTTGGTTAT+GGG | 0.346642 | 5.4:+48959439 | MS.gene89505:CDS |
| TGAAGAAGGTGATTATTTAT+TGG | 0.349946 | 5.4:+48960700 | MS.gene89505:CDS |
| TACAAACTCGTTTCAGAGTT+AGG | 0.351900 | 5.4:+48960431 | MS.gene89505:CDS |
| CAGCTTCTAGAGCCATGTTT+AGG | 0.352441 | 5.4:-48959147 | None:intergenic |
| CTTGCCCTCTTCCCCATCTT+GGG | 0.360373 | 5.4:-48955889 | None:intergenic |
| AACAACTTGTGATGAAGAAT+TGG | 0.362230 | 5.4:-48959260 | None:intergenic |
| GTTGTTCTAGGAAATTATTT+TGG | 0.364383 | 5.4:+48959277 | MS.gene89505:CDS |
| TCCCTAAATATGTTTATGTT+TGG | 0.371836 | 5.4:-48955866 | None:intergenic |
| GCTCTTGCTCAGGTTGTGTT+TGG | 0.373522 | 5.4:+48959679 | MS.gene89505:CDS |
| AAATTGTAATCTGCACAGTT+TGG | 0.378145 | 5.4:-48956571 | None:intergenic |
| TTTCCAATTATCCAAATCAT+AGG | 0.378532 | 5.4:-48956050 | None:intergenic |
| TAAGCCTAGTCTTATTCTAA+TGG | 0.381057 | 5.4:-48959056 | None:intergenic |
| TGTGATGAAGAATTGGCATT+TGG | 0.381189 | 5.4:-48959253 | None:intergenic |
| ACATTGGGAGTTACAAATAA+TGG | 0.382608 | 5.4:+48960488 | MS.gene89505:CDS |
| CTTCAAGGAGATTCCTTTGA+AGG | 0.385860 | 5.4:+48955971 | MS.gene89505:CDS |
| GTCTTTAGCTCTTTGAATGA+TGG | 0.387737 | 5.4:-48954906 | None:intergenic |
| GGTCCAAAGGTCTACGAATT+CGG | 0.387773 | 5.4:+48960293 | MS.gene89505:CDS |
| TGTTGTGTTGGTTATGGGAT+TGG | 0.391466 | 5.4:+48959444 | MS.gene89505:CDS |
| TTTGACGGAAAAGAAGTTGT+AGG | 0.396027 | 5.4:-48960342 | None:intergenic |
| ACCAAACATAAACATATTTA+GGG | 0.398770 | 5.4:+48955865 | MS.gene89505:CDS |
| TTAGCAAAAGTAATATCAAC+AGG | 0.400965 | 5.4:-48959595 | None:intergenic |
| AGGAATAATTTGAGTAGCTT+AGG | 0.401616 | 5.4:-48960322 | None:intergenic |
| TAGCCGAATTCGTAGACCTT+TGG | 0.407677 | 5.4:-48960296 | None:intergenic |
| TGGTGGAATGGCTCTTGCTC+AGG | 0.412349 | 5.4:+48959669 | MS.gene89505:CDS |
| ACAAATAATGGAAGCATGGC+TGG | 0.415569 | 5.4:+48960500 | MS.gene89505:CDS |
| GCTGGTTATCCTGGTGAACT+TGG | 0.417730 | 5.4:+48959649 | MS.gene89505:CDS |
| ATAAGACTAGGCTTATTTGA+TGG | 0.417837 | 5.4:+48959064 | MS.gene89505:CDS |
| AGCAAATGAGAGTGGTGTTA+AGG | 0.424783 | 5.4:+48960673 | MS.gene89505:CDS |
| ATTGTACACTGCTCTTGCTT+CGG | 0.426048 | 5.4:-48955810 | None:intergenic |
| AGGTGATTATTTATTGGCTG+TGG | 0.428847 | 5.4:+48960706 | MS.gene89505:CDS |
| GTGATGAAGAATTGGCATTT+GGG | 0.435816 | 5.4:-48959252 | None:intergenic |
| GTTGAGATTACAGAAAGTAT+AGG | 0.437497 | 5.4:-48954879 | None:intergenic |
| GGTAAAGGGATAAGATTGAA+TGG | 0.438016 | 5.4:+48955055 | MS.gene89505:CDS |
| AAGCCAAAGAAAGGTAGAAA+TGG | 0.439382 | 5.4:+48960548 | MS.gene89505:CDS |
| GTTGTATGCAACTATGAAAT+GGG | 0.444200 | 5.4:-48956498 | None:intergenic |
| CACAAAAGTACCAAAATAAC+CGG | 0.444513 | 5.4:-48959565 | None:intergenic |
| GCAGGTGAAACGCGCGAAGT+TGG | 0.453444 | 5.4:+48960617 | MS.gene89505:CDS |
| TGTTGTATGCAACTATGAAA+TGG | 0.455401 | 5.4:-48956499 | None:intergenic |
| ATAAGTTCCTGTTGTTTCCC+TGG | 0.456028 | 5.4:-48959514 | None:intergenic |
| CTCACTCTCATGTCTGTCAT+TGG | 0.457244 | 5.4:-48960221 | None:intergenic |
| TTGGTGGTGTCACAGGAGTA+AGG | 0.458091 | 5.4:-48954842 | None:intergenic |
| TCACTCCACCATTGGTAACT+AGG | 0.459816 | 5.4:-48955007 | None:intergenic |
| AGAGATGACTTAGAGTTGCC+AGG | 0.461498 | 5.4:+48959496 | MS.gene89505:CDS |
| GACAGCTGGTGAAGACCCTT+TGG | 0.462155 | 5.4:+48955913 | MS.gene89505:CDS |
| GAGAGTGTGAAGGTGGAAGC+AGG | 0.462428 | 5.4:+48960599 | MS.gene89505:CDS |
| GGTATACCGAGTCGAGGAAT+AGG | 0.464133 | 5.4:-48954986 | None:intergenic |
| TGGTGGTGTCACAGGAGTAA+GGG | 0.464811 | 5.4:-48954841 | None:intergenic |
| ACATATTTAGGGACCCAAGA+TGG | 0.464899 | 5.4:+48955876 | MS.gene89505:CDS |
| TAGCTCTTTGAATGATGGTA+AGG | 0.468770 | 5.4:-48954901 | None:intergenic |
| CACTCTCATTTGCTATACTA+AGG | 0.471952 | 5.4:-48960664 | None:intergenic |
| TCTTATGTGAGAGGACTTCA+AGG | 0.474991 | 5.4:+48955956 | MS.gene89505:CDS |
| TTACCATATTTCAGTTTGGT+TGG | 0.475211 | 5.4:-48959091 | None:intergenic |
| GCACGGTCGATTTGAGATAT+CGG | 0.478301 | 5.4:-48959016 | None:intergenic |
| GGCGTTGCAGATTATGGTAA+AGG | 0.479648 | 5.4:+48955040 | MS.gene89505:CDS |
| CATATTTAGGGACCCAAGAT+GGG | 0.480274 | 5.4:+48955877 | MS.gene89505:CDS |
| TTATTTATTGGCTGTGGGAG+AGG | 0.483161 | 5.4:+48960712 | MS.gene89505:CDS |
| ATTAAGTTTCCCACCTTCAA+AGG | 0.485850 | 5.4:-48955984 | None:intergenic |
| TCCTGGTGAACTTGGTGGAA+TGG | 0.490265 | 5.4:+48959657 | MS.gene89505:CDS |
| CTTTAGCAACTTCGACTGCT+TGG | 0.490338 | 5.4:-48959411 | None:intergenic |
| AAGAACATTGTGTGTCATCC+TGG | 0.490958 | 5.4:+48959349 | MS.gene89505:CDS |
| AGCGTAGATGAAAACTTACC+AGG | 0.492540 | 5.4:-48959712 | None:intergenic |
| GCGTTGCAGATTATGGTAAA+GGG | 0.492956 | 5.4:+48955041 | MS.gene89505:CDS |
| GGTTATCCTGGTGAACTTGG+TGG | 0.494580 | 5.4:+48959652 | MS.gene89505:CDS |
| CAAGGAGATTCCTTTGAAGG+TGG | 0.495290 | 5.4:+48955974 | MS.gene89505:CDS |
| GGTCACTTTGCAAGATTTGG+AGG | 0.497161 | 5.4:+48956462 | MS.gene89505:intron |
| CTGTTTGTGAAGCCAAAGAA+AGG | 0.504938 | 5.4:+48960539 | MS.gene89505:CDS |
| AAGAGGGTTGGTGGTGTCAC+AGG | 0.505365 | 5.4:-48954849 | None:intergenic |
| GTATTGAATGAGTGGTTGAT+TGG | 0.506227 | 5.4:-48960385 | None:intergenic |
| GTGTTTGGTGACTATAACCC+TGG | 0.507043 | 5.4:+48959694 | MS.gene89505:CDS |
| GTAAAGGGATAAGATTGAAT+GGG | 0.508832 | 5.4:+48955056 | MS.gene89505:CDS |
| TTGATTCCAAGCTTTGGTAC+CGG | 0.509335 | 5.4:+48955137 | MS.gene89505:CDS |
| CATGTCGATTACTGTCACAT+TGG | 0.510641 | 5.4:+48960472 | MS.gene89505:CDS |
| GTGAGAGCTGATCCATCATC+AGG | 0.511713 | 5.4:+48960239 | MS.gene89505:CDS |
| ACTGATCCGGTACCAAAGCT+TGG | 0.513027 | 5.4:-48955143 | None:intergenic |
| ATGTCGATTACTGTCACATT+GGG | 0.513345 | 5.4:+48960473 | MS.gene89505:CDS |
| CTACCGGGATAGCCTGATGA+TGG | 0.517596 | 5.4:-48960251 | None:intergenic |
| TAAGACTAGGCTTATTTGAT+GGG | 0.517913 | 5.4:+48959065 | MS.gene89505:CDS |
| GGGTACATGAGTTGGTGAAT+CGG | 0.520809 | 5.4:-48954819 | None:intergenic |
| GGGACCCAAGATGGGGAAGA+GGG | 0.522405 | 5.4:+48955885 | MS.gene89505:CDS |
| GGTGATTATTTATTGGCTGT+GGG | 0.523886 | 5.4:+48960707 | MS.gene89505:CDS |
| CATCGTGTCACGGCTTACAT+TGG | 0.524116 | 5.4:+48954928 | MS.gene89505:CDS |
| GGGGTTTGAGAGTGTGAAGG+TGG | 0.524489 | 5.4:+48960592 | MS.gene89505:CDS |
| ACATCTGCTACAGCATCCTC+AGG | 0.525229 | 5.4:-48957047 | None:intergenic |
| GCAAGAGCAGTGTACAATGC+TGG | 0.525450 | 5.4:+48955815 | MS.gene89505:CDS |
| GCAACGCTTCACTCCACCAT+TGG | 0.528569 | 5.4:-48955015 | None:intergenic |
| TGTGCTTACAACCGTGTCAA+TGG | 0.530376 | 5.4:+48956544 | MS.gene89505:CDS |
| AGGGACCCAAGATGGGGAAG+AGG | 0.531909 | 5.4:+48955884 | MS.gene89505:CDS |
| AGAGTTGCCAGGGAAACAAC+AGG | 0.533456 | 5.4:+48959507 | MS.gene89505:CDS |
| AATATCGTTACCATATTACA+AGG | 0.534804 | 5.4:-48959304 | None:intergenic |
| AGTAGTTGATTATGTTGTGT+TGG | 0.538595 | 5.4:+48959432 | MS.gene89505:CDS |
| AAGGTCTACGAATTCGGCTA+TGG | 0.539382 | 5.4:+48960299 | MS.gene89505:CDS |
| GATCCATCATCAGGCTATCC+CGG | 0.542828 | 5.4:+48960248 | MS.gene89505:CDS |
| AGTGACCAACCCTACTGATC+CGG | 0.543515 | 5.4:-48955156 | None:intergenic |
| GGTGGGGTTTGAGAGTGTGA+AGG | 0.543551 | 5.4:+48960589 | MS.gene89505:CDS |
| GGCTTCACAAACAGCAACAC+AGG | 0.545539 | 5.4:-48960530 | None:intergenic |
| ATCCAATGAAACAGTTGGTG+GGG | 0.547941 | 5.4:+48960573 | MS.gene89505:CDS |
| AGCTTTGGTACCGGATCAGT+AGG | 0.548295 | 5.4:+48955146 | MS.gene89505:CDS |
| AAGGAGATTCCTTTGAAGGT+GGG | 0.551664 | 5.4:+48955975 | MS.gene89505:CDS |
| GTAGAAACGATAGGTTCTAC+CGG | 0.553560 | 5.4:-48960267 | None:intergenic |
| CAGCAGTGAGAATAACTTGA+GGG | 0.555055 | 5.4:-48955108 | None:intergenic |
| GCCATTCCACCAAGTTCACC+AGG | 0.555057 | 5.4:-48959658 | None:intergenic |
| AATGGAGAATAGATTGTGTA+GGG | 0.557476 | 5.4:-48959038 | None:intergenic |
| TACAATGCTGGACAAGCAGA+AGG | 0.560273 | 5.4:+48955827 | MS.gene89505:CDS |
| TGCTAAAGCGTCTAAAAGAC+CGG | 0.560460 | 5.4:+48959546 | MS.gene89505:CDS |
| GAGATGACTTAGAGTTGCCA+GGG | 0.561709 | 5.4:+48959497 | MS.gene89505:CDS |
| TATGATGTTTCTTATGTGAG+AGG | 0.562068 | 5.4:+48955947 | MS.gene89505:CDS |
| AATCCAATGAAACAGTTGGT+GGG | 0.563340 | 5.4:+48960572 | MS.gene89505:CDS |
| AATATGGTAACGATATTACA+AGG | 0.568327 | 5.4:+48959310 | MS.gene89505:CDS |
| GGAAGAGGGCAAGAGACAGC+TGG | 0.570323 | 5.4:+48955899 | MS.gene89505:CDS |
| AAGGTTGATGACAAAATTGG+AGG | 0.573773 | 5.4:+48959616 | MS.gene89505:CDS |
| TGGAAATCCAATGAAACAGT+TGG | 0.575592 | 5.4:+48960568 | MS.gene89505:CDS |
| TAATGGAGAATAGATTGTGT+AGG | 0.575658 | 5.4:-48959039 | None:intergenic |
| AATGAAAGAGATGAAAGTAA+TGG | 0.575922 | 5.4:-48954765 | None:intergenic |
| GTAGCAGATGTACTTCAAGC+TGG | 0.587190 | 5.4:+48957059 | MS.gene89505:CDS |
| GGTGGTGTCACAGGAGTAAG+GGG | 0.588214 | 5.4:-48954840 | None:intergenic |
| TTTGTTCCATCACTACATCC+AGG | 0.593486 | 5.4:-48959367 | None:intergenic |
| ATTTATTAACCAAGACGGCA+AGG | 0.596608 | 5.4:+48956590 | MS.gene89505:CDS |
| ACTCTGAAACGAGTTTGTAA+CGG | 0.597673 | 5.4:-48960427 | None:intergenic |
| GCGTAGATGAAAACTTACCA+GGG | 0.599174 | 5.4:-48959711 | None:intergenic |
| AAATCCAATGAAACAGTTGG+TGG | 0.602087 | 5.4:+48960571 | MS.gene89505:CDS |
| CTCAAAACAAAACCTAAACA+TGG | 0.602904 | 5.4:+48959135 | MS.gene89505:CDS |
| TGGACCTGTGTAGAAACGAT+AGG | 0.603378 | 5.4:-48960276 | None:intergenic |
| TTACAATTTATTAACCAAGA+CGG | 0.603499 | 5.4:+48956585 | MS.gene89505:CDS |
| GGTGTTAAGGTGATTGAAGA+AGG | 0.603997 | 5.4:+48960686 | MS.gene89505:CDS |
| AGGTTGATGACAAAATTGGA+GGG | 0.605166 | 5.4:+48959617 | MS.gene89505:CDS |
| TCGTTTCTACACAGGTCCAA+AGG | 0.612861 | 5.4:+48960280 | MS.gene89505:CDS |
| TGGTGGAGTGAAGCGTTGCA+CGG | 0.613746 | 5.4:+48955019 | MS.gene89505:CDS |
| AGTTACAAATAATGGAAGCA+TGG | 0.615223 | 5.4:+48960496 | MS.gene89505:CDS |
| ATACCGAGTCGAGGAATAGG+TGG | 0.618401 | 5.4:-48954983 | None:intergenic |
| GTGAATCGGCATGAACGAGT+TGG | 0.622493 | 5.4:-48954805 | None:intergenic |
| TTTGGATAATTGGAAAGGTG+TGG | 0.625588 | 5.4:+48956057 | MS.gene89505:CDS |
| ATTTGGGCCTATAACTACAA+TGG | 0.627611 | 5.4:-48959236 | None:intergenic |
| GATCAAAGTCAAGAAAGTGA+AGG | 0.629521 | 5.4:+48959466 | MS.gene89505:CDS |
| TGTCATCCTGGATGTAGTGA+TGG | 0.632769 | 5.4:+48959361 | MS.gene89505:CDS |
| AGAATAGATTGTGTAGGGCA+CGG | 0.634890 | 5.4:-48959033 | None:intergenic |
| AGAACCTATCGTTTCTACAC+AGG | 0.635542 | 5.4:+48960272 | MS.gene89505:CDS |
| TCGTTACCATATTACAAGGA+CGG | 0.635985 | 5.4:-48959300 | None:intergenic |
| TATGATTTGGATAATTGGAA+AGG | 0.637158 | 5.4:+48956052 | MS.gene89505:CDS |
| TCGGTATACCTAGTTACCAA+TGG | 0.640951 | 5.4:+48954999 | MS.gene89505:CDS |
| CAATGTGACAGTAATCGACA+TGG | 0.643083 | 5.4:-48960471 | None:intergenic |
| GCAGCAGTGAGAATAACTTG+AGG | 0.643208 | 5.4:-48955109 | None:intergenic |
| GAGCTAAAGACATCGTGTCA+CGG | 0.644314 | 5.4:+48954918 | MS.gene89505:CDS |
| GCTTTGGTACCGGATCAGTA+GGG | 0.645524 | 5.4:+48955147 | MS.gene89505:CDS |
| ATACAACAAGGACGGTCTAG+TGG | 0.647044 | 5.4:+48956514 | MS.gene89505:CDS |
| CTTAGTATAGCAAATGAGAG+TGG | 0.647197 | 5.4:+48960665 | MS.gene89505:CDS |
| TAGAAACGATAGGTTCTACC+GGG | 0.655184 | 5.4:-48960266 | None:intergenic |
| GCTCTAGAAGCTGCAAGAAG+CGG | 0.656439 | 5.4:+48959157 | MS.gene89505:CDS |
| ATAGTTGCATACAACAAGGA+CGG | 0.656710 | 5.4:+48956506 | MS.gene89505:CDS |
| GTATACCTAGTTACCAATGG+TGG | 0.657300 | 5.4:+48955002 | MS.gene89505:CDS |
| AGGTTATGCAAAAGCACCTG+AGG | 0.657674 | 5.4:+48957031 | MS.gene89505:CDS |
| TTGTATGCAACTATGAAATG+GGG | 0.657868 | 5.4:-48956497 | None:intergenic |
| AGTTTGGAACTCCATTGACA+CGG | 0.658172 | 5.4:-48956555 | None:intergenic |
| GCTCCACCTATTCCTCGACT+CGG | 0.663101 | 5.4:+48954980 | MS.gene89505:CDS |
| TTCTCCATTAGAATAAGACT+AGG | 0.667229 | 5.4:+48959052 | MS.gene89505:CDS |
| ATATTTAGGGACCCAAGATG+GGG | 0.678025 | 5.4:+48955878 | MS.gene89505:CDS |
| ACAATGCTGGACAAGCAGAA+GGG | 0.678523 | 5.4:+48955828 | MS.gene89505:CDS |
| TAACTAGGTATACCGAGTCG+AGG | 0.691940 | 5.4:-48954992 | None:intergenic |
| GTGGTGTCACAGGAGTAAGG+GGG | 0.708710 | 5.4:-48954839 | None:intergenic |
| TTTCATAGTTGCATACAACA+AGG | 0.712280 | 5.4:+48956502 | MS.gene89505:CDS |
| TGTATGCAACTATGAAATGG+GGG | 0.725926 | 5.4:-48956496 | None:intergenic |
| TAGCAAAAGTAATATCAACA+GGG | 0.732749 | 5.4:-48959594 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTTAAAAAATAAATT+TGG | + | chr5.4:48955261-48955280 | MS.gene89505:intron | 0.0% |
| !! | AAATTGATCTTATTAATTAT+TGG | + | chr5.4:48956240-48956259 | MS.gene89505:intron | 10.0% |
| !! | ATAACTAATAAGATTAAAAA+TGG | - | chr5.4:48956371-48956390 | None:intergenic | 10.0% |
| !! | TATTATAATTTATACATGAT+AGG | + | chr5.4:48957006-48957025 | MS.gene89505:intron | 10.0% |
| !! | TGAAAAACATATATTTATAA+AGG | - | chr5.4:48957099-48957118 | None:intergenic | 10.0% |
| !!! | AAAATACACTTATTTTAAAA+CGG | - | chr5.4:48956134-48956153 | None:intergenic | 10.0% |
| !!! | AACTCATTTTTTTTAAAAAA+TGG | - | chr5.4:48958585-48958604 | None:intergenic | 10.0% |
| !!! | ATTTTACAATCATTATAATA+CGG | - | chr5.4:48955331-48955350 | None:intergenic | 10.0% |
| !!! | TATTTTAGTTGTTTTAATTT+TGG | + | chr5.4:48957884-48957903 | MS.gene89505:intron | 10.0% |
| !!! | TTAAAATACTTTGTATTTTA+GGG | + | chr5.4:48956193-48956212 | MS.gene89505:intron | 10.0% |
| !!! | TTCTTATATTATTAAACTTT+TGG | + | chr5.4:48956399-48956418 | MS.gene89505:intron | 10.0% |
| !!! | TTTTAAAAAATGGATTTTTA+TGG | - | chr5.4:48958575-48958594 | None:intergenic | 10.0% |
| !!! | TTTTTAAAAATATCAAACAT+AGG | - | chr5.4:48955254-48955273 | None:intergenic | 10.0% |
| !!! | TTTTTAATCTTATTAGTTAT+TGG | + | chr5.4:48956371-48956390 | MS.gene89505:intron | 10.0% |
| !! | AATATGAATGAAAAATACAA+GGG | - | chr5.4:48957601-48957620 | None:intergenic | 15.0% |
| !! | AATCTAATTCTATTCAAATT+AGG | + | chr5.4:48956441-48956460 | MS.gene89505:intron | 15.0% |
| !! | AGAATTAGATTATTCTTAAA+TGG | - | chr5.4:48956432-48956451 | None:intergenic | 15.0% |
| !! | ATAATCAAAGTTTCAAATTA+TGG | - | chr5.4:48960057-48960076 | None:intergenic | 15.0% |
| !! | ATCAAGATTTCAAATTTAAA+CGG | - | chr5.4:48959837-48959856 | None:intergenic | 15.0% |
| !! | GTATTATAATGATTGTAAAA+TGG | + | chr5.4:48955330-48955349 | MS.gene89505:intron | 15.0% |
| !! | TAATATGAATGAAAAATACA+AGG | - | chr5.4:48957602-48957621 | None:intergenic | 15.0% |
| !!! | AAAAAGTATGATCATAAATT+TGG | - | chr5.4:48960104-48960123 | None:intergenic | 15.0% |
| !!! | AAATTAGTTTACAAAATATG+TGG | - | chr5.4:48956895-48956914 | None:intergenic | 15.0% |
| !!! | AACGTTTATAGTTTTATTAA+AGG | - | chr5.4:48957471-48957490 | None:intergenic | 15.0% |
| !!! | AATAAAACTATAAACGTTTT+TGG | + | chr5.4:48957473-48957492 | MS.gene89505:intron | 15.0% |
| !!! | AATTAGTTTACAAAATATGT+GGG | - | chr5.4:48956894-48956913 | None:intergenic | 15.0% |
| !!! | ACTTTATTTGTTATAGTTTT+AGG | + | chr5.4:48958441-48958460 | MS.gene89505:intron | 15.0% |
| !!! | AGTTTTATTAAAGGAAAATA+TGG | - | chr5.4:48957462-48957481 | None:intergenic | 15.0% |
| !!! | ATACTAGTTCATATTTTATA+CGG | + | chr5.4:48957168-48957187 | MS.gene89505:intron | 15.0% |
| !!! | ATTTTATCTTTTTGAAACAA+TGG | + | chr5.4:48956798-48956817 | MS.gene89505:intron | 15.0% |
| !!! | ATTTTTTTTACTGTCAAAAA+AGG | + | chr5.4:48956954-48956973 | MS.gene89505:intron | 15.0% |
| !!! | CTTTATTTGTTATAGTTTTA+GGG | + | chr5.4:48958442-48958461 | MS.gene89505:intron | 15.0% |
| !!! | GAAAAAAGTGATTTTTTTAA+GGG | + | chr5.4:48958748-48958767 | MS.gene89505:intron | 15.0% |
| !!! | GTATTTTAAGTTTTTATGAA+TGG | + | chr5.4:48956147-48956166 | MS.gene89505:intron | 15.0% |
| !!! | GTTAAAATACTTTGTATTTT+AGG | + | chr5.4:48956192-48956211 | MS.gene89505:intron | 15.0% |
| !!! | TATTTGCTATTATGTATTTT+AGG | + | chr5.4:48955705-48955724 | MS.gene89505:intron | 15.0% |
| !!! | TGAAAAAAGTGATTTTTTTA+AGG | + | chr5.4:48958747-48958766 | MS.gene89505:intron | 15.0% |
| !!! | TTCTTATATTGTTAAACTTT+TGG | + | chr5.4:48956268-48956287 | MS.gene89505:intron | 15.0% |
| !!! | TTTGTTTCAATTGTTATTAT+GGG | + | chr5.4:48955759-48955778 | MS.gene89505:intron | 15.0% |
| !!! | TTTTGTTTCAATTGTTATTA+TGG | + | chr5.4:48955758-48955777 | MS.gene89505:intron | 15.0% |
| !! | AAACTGAAATATGGTAAAAT+TGG | + | chr5.4:48959097-48959116 | MS.gene89505:CDS | 20.0% |
| !! | ACCAAACATAAACATATTTA+GGG | + | chr5.4:48955865-48955884 | MS.gene89505:CDS | 20.0% |
| !! | ACTAATAAGATTAAAAATGG+AGG | - | chr5.4:48956368-48956387 | None:intergenic | 20.0% |
| !! | AGATTTGGATTATTCTTAAT+TGG | - | chr5.4:48956301-48956320 | None:intergenic | 20.0% |
| !! | ATACAAAATACAAAAGAAGA+AGG | - | chr5.4:48957930-48957949 | None:intergenic | 20.0% |
| !! | ATTGTTAAAAAAGACTATGA+TGG | - | chr5.4:48957687-48957706 | None:intergenic | 20.0% |
| !! | GTTGTTAAATATATTTGACA+TGG | - | chr5.4:48959991-48960010 | None:intergenic | 20.0% |
| !! | TAAAGTGATTGCAAATTTAA+AGG | - | chr5.4:48958427-48958446 | None:intergenic | 20.0% |
| !! | TGAACTAAATTGAATAGATT+TGG | - | chr5.4:48956316-48956335 | None:intergenic | 20.0% |
| !! | TTACAATTTATTAACCAAGA+CGG | + | chr5.4:48956585-48956604 | MS.gene89505:CDS | 20.0% |
| !! | TTCAAACATGAATTTAAAGA+GGG | - | chr5.4:48955182-48955201 | None:intergenic | 20.0% |
| !! | TTTCAAACATGAATTTAAAG+AGG | - | chr5.4:48955183-48955202 | None:intergenic | 20.0% |
| !!! | AATTTTACCATATTTCAGTT+TGG | - | chr5.4:48959098-48959117 | None:intergenic | 20.0% |
| !!! | ATCAATTTTTTTCAACAACA+AGG | - | chr5.4:48958628-48958647 | None:intergenic | 20.0% |
| !!! | ATTTTTTTACCACATTATGT+GGG | - | chr5.4:48959757-48959776 | None:intergenic | 20.0% |
| !!! | CATATTTTGAATTTACCAAA+GGG | - | chr5.4:48955931-48955950 | None:intergenic | 20.0% |
| !!! | GCTTTTCTAACTTATAATTT+TGG | + | chr5.4:48957398-48957417 | MS.gene89505:intron | 20.0% |
| !!! | GTATTTTGATGTAATCTTTT+GGG | - | chr5.4:48960202-48960221 | None:intergenic | 20.0% |
| !!! | TATATTTAACAACAGTTTTC+TGG | + | chr5.4:48959998-48960017 | MS.gene89505:intron | 20.0% |
| !!! | TCATATTTTGAATTTACCAA+AGG | - | chr5.4:48955932-48955951 | None:intergenic | 20.0% |
| !!! | TCATTTTTAAGTGTTTGTTT+AGG | - | chr5.4:48958730-48958749 | None:intergenic | 20.0% |
| !!! | TGAAAAAAATCTGAAACAAA+CGG | + | chr5.4:48958788-48958807 | MS.gene89505:intron | 20.0% |
| !!! | TTAATTTGACACATAAAAGT+CGG | - | chr5.4:48957213-48957232 | None:intergenic | 20.0% |
| !!! | TTGTTTCAATTGTTATTATG+GGG | + | chr5.4:48955760-48955779 | MS.gene89505:intron | 20.0% |
| !!! | TTTGTTTTCACTTTTGAATT+AGG | - | chr5.4:48956726-48956745 | None:intergenic | 20.0% |
| ! | AAAAATAAACCCACATAATG+TGG | + | chr5.4:48959745-48959764 | MS.gene89505:intron | 25.0% |
| ! | AATATCGTTACCATATTACA+AGG | - | chr5.4:48959307-48959326 | None:intergenic | 25.0% |
| ! | AATGAAAGAGATGAAAGTAA+TGG | - | chr5.4:48954768-48954787 | None:intergenic | 25.0% |
| ! | ACAAATTCCATTGTAGTTAT+AGG | + | chr5.4:48959229-48959248 | MS.gene89505:CDS | 25.0% |
| ! | AGGAAAAAATGGAATTTCAA+TGG | + | chr5.4:48956610-48956629 | MS.gene89505:CDS | 25.0% |
| ! | CACATAATGTGGTAAAAAAA+TGG | + | chr5.4:48959756-48959775 | MS.gene89505:intron | 25.0% |
| ! | CACCAAACATAAACATATTT+AGG | + | chr5.4:48955864-48955883 | MS.gene89505:CDS | 25.0% |
| ! | GCAAATTTAAAGGTAGTAAA+TGG | - | chr5.4:48958417-48958436 | None:intergenic | 25.0% |
| ! | GGAAAAAATGGAATTTCAAT+GGG | + | chr5.4:48956611-48956630 | MS.gene89505:CDS | 25.0% |
| ! | TAATTTATACATGATAGGCA+AGG | + | chr5.4:48957011-48957030 | MS.gene89505:intron | 25.0% |
| ! | TAGCAAAAGTAATATCAACA+GGG | - | chr5.4:48959597-48959616 | None:intergenic | 25.0% |
| ! | TATGTGGGCAAATTAAAAAA+AGG | - | chr5.4:48956879-48956898 | None:intergenic | 25.0% |
| ! | TCATTCATATTACTAGCATA+TGG | + | chr5.4:48957610-48957629 | MS.gene89505:intron | 25.0% |
| ! | TCCCTAAATATGTTTATGTT+TGG | - | chr5.4:48955869-48955888 | None:intergenic | 25.0% |
| ! | TGAAGAAGGTGATTATTTAT+TGG | + | chr5.4:48960700-48960719 | MS.gene89505:CDS | 25.0% |
| ! | TGTGATTATGATATAGACAA+AGG | - | chr5.4:48957250-48957269 | None:intergenic | 25.0% |
| ! | TTAAAGGAAAATATGGAGTA+TGG | - | chr5.4:48957455-48957474 | None:intergenic | 25.0% |
| ! | TTAGCAAAAGTAATATCAAC+AGG | - | chr5.4:48959598-48959617 | None:intergenic | 25.0% |
| ! | TTTCCAATTATCCAAATCAT+AGG | - | chr5.4:48956053-48956072 | None:intergenic | 25.0% |
| !! | AAAGTATAGGATTTTGTAAG+AGG | - | chr5.4:48954869-48954888 | None:intergenic | 25.0% |
| !! | AAGTATAGGATTTTGTAAGA+GGG | - | chr5.4:48954868-48954887 | None:intergenic | 25.0% |
| !! | AATATGGTAACGATATTACA+AGG | + | chr5.4:48959310-48959329 | MS.gene89505:CDS | 25.0% |
| !! | AGATTTTGTCTTTGGTTAAA+AGG | - | chr5.4:48958022-48958041 | None:intergenic | 25.0% |
| !! | CAAAGTAAGTTTTCTTTCTT+CGG | + | chr5.4:48956099-48956118 | MS.gene89505:intron | 25.0% |
| !! | CCTAATAGCTTTTCATTTTA+GGG | + | chr5.4:48958664-48958683 | MS.gene89505:intron | 25.0% |
| !! | GAAAAAAATCTGAAACAAAC+GGG | + | chr5.4:48958789-48958808 | MS.gene89505:intron | 25.0% |
| !! | TATGATTTGGATAATTGGAA+AGG | + | chr5.4:48956052-48956071 | MS.gene89505:CDS | 25.0% |
| !! | TCAAAAAAGGTATATTACGT+CGG | + | chr5.4:48956967-48956986 | MS.gene89505:intron | 25.0% |
| !! | TCCTAATAGCTTTTCATTTT+AGG | + | chr5.4:48958663-48958682 | MS.gene89505:intron | 25.0% |
| !! | TTTTGGTCAGTTTACATTTT+AGG | + | chr5.4:48957415-48957434 | MS.gene89505:intron | 25.0% |
| !!! | AATGGATTTTTATGGATAGT+AGG | - | chr5.4:48958567-48958586 | None:intergenic | 25.0% |
| !!! | ACTGATCATCTATTTTGTTT+AGG | + | chr5.4:48957496-48957515 | MS.gene89505:intron | 25.0% |
| !!! | CATTTTTTTACCACATTATG+TGG | - | chr5.4:48959758-48959777 | None:intergenic | 25.0% |
| !!! | GGTATTTTGATGTAATCTTT+TGG | - | chr5.4:48960203-48960222 | None:intergenic | 25.0% |
| !!! | GTTGTTCTAGGAAATTATTT+TGG | + | chr5.4:48959277-48959296 | MS.gene89505:CDS | 25.0% |
| !!! | TACACTTATTTTAAAACGGA+TGG | - | chr5.4:48956130-48956149 | None:intergenic | 25.0% |
| !!! | TATGTGGGTTTATTTTTTCA+TGG | - | chr5.4:48959742-48959761 | None:intergenic | 25.0% |
| !!! | TGTTGATATTACTTTTGCTA+AGG | + | chr5.4:48959597-48959616 | MS.gene89505:CDS | 25.0% |
| AAATGGCTAAACTGAGAAAT+GGG | - | chr5.4:48958400-48958419 | None:intergenic | 30.0% | |
| AAATTGTAATCTGCACAGTT+TGG | - | chr5.4:48956574-48956593 | None:intergenic | 30.0% | |
| AACAACTTGTGATGAAGAAT+TGG | - | chr5.4:48959263-48959282 | None:intergenic | 30.0% | |
| AACCAAAGACAAAATCTTGA+AGG | + | chr5.4:48958025-48958044 | MS.gene89505:intron | 30.0% | |
| AACTACTATTACTCGACTAA+TGG | + | chr5.4:48960141-48960160 | MS.gene89505:intron | 30.0% | |
| AAGAAGTTTGACATAGACTA+AGG | - | chr5.4:48958816-48958835 | None:intergenic | 30.0% | |
| AATCCAACCAAACTGAAATA+TGG | + | chr5.4:48959088-48959107 | MS.gene89505:CDS | 30.0% | |
| ACAATGACATGAAGATATGT+GGG | - | chr5.4:48957661-48957680 | None:intergenic | 30.0% | |
| ACACTAGAAGTAAATTGTCA+CGG | - | chr5.4:48958916-48958935 | None:intergenic | 30.0% | |
| ACATATCTTCATGTCATTGT+AGG | + | chr5.4:48957661-48957680 | MS.gene89505:intron | 30.0% | |
| ACATTGGGAGTTACAAATAA+TGG | + | chr5.4:48960488-48960507 | MS.gene89505:CDS | 30.0% | |
| ACTACTATTACTCGACTAAT+GGG | + | chr5.4:48960142-48960161 | MS.gene89505:intron | 30.0% | |
| AGAAGTTTGACATAGACTAA+GGG | - | chr5.4:48958815-48958834 | None:intergenic | 30.0% | |
| AGGAATAATTTGAGTAGCTT+AGG | - | chr5.4:48960325-48960344 | None:intergenic | 30.0% | |
| AGTAGTTGATTATGTTGTGT+TGG | + | chr5.4:48959432-48959451 | MS.gene89505:CDS | 30.0% | |
| ATAAGACTAGGCTTATTTGA+TGG | + | chr5.4:48959064-48959083 | MS.gene89505:CDS | 30.0% | |
| CAAAAATTTACTGTTGGACT+TGG | + | chr5.4:48957727-48957746 | MS.gene89505:intron | 30.0% | |
| CATATTACTAGCATATGGTT+TGG | + | chr5.4:48957615-48957634 | MS.gene89505:intron | 30.0% | |
| CATTGTTTGCAATCATAACT+CGG | - | chr5.4:48959909-48959928 | None:intergenic | 30.0% | |
| CCCTAAAATGAAAAGCTATT+AGG | - | chr5.4:48958667-48958686 | None:intergenic | 30.0% | |
| CGAAGAAAGAAAACTTACTT+TGG | - | chr5.4:48956101-48956120 | None:intergenic | 30.0% | |
| CTCAAAACAAAACCTAAACA+TGG | + | chr5.4:48959135-48959154 | MS.gene89505:CDS | 30.0% | |
| GTAAAGGGATAAGATTGAAT+GGG | + | chr5.4:48955056-48955075 | MS.gene89505:CDS | 30.0% | |
| GTTGTATGCAACTATGAAAT+GGG | - | chr5.4:48956501-48956520 | None:intergenic | 30.0% | |
| TAAATGGCTAAACTGAGAAA+TGG | - | chr5.4:48958401-48958420 | None:intergenic | 30.0% | |
| TAAGACTAGGCTTATTTGAT+GGG | + | chr5.4:48959065-48959084 | MS.gene89505:CDS | 30.0% | |
| TAATTCTCCTAAACTCATTG+AGG | + | chr5.4:48958219-48958238 | MS.gene89505:intron | 30.0% | |
| TACAATGACATGAAGATATG+TGG | - | chr5.4:48957662-48957681 | None:intergenic | 30.0% | |
| TACGGTATGAGATTCAATAT+CGG | + | chr5.4:48957186-48957205 | MS.gene89505:intron | 30.0% | |
| TATGATGTTTCTTATGTGAG+AGG | + | chr5.4:48955947-48955966 | MS.gene89505:CDS | 30.0% | |
| TCAATTTCTAAGCAATGTCA+TGG | - | chr5.4:48957974-48957993 | None:intergenic | 30.0% | |
| TCAGTCCAAAAATTTACTGT+TGG | + | chr5.4:48957721-48957740 | MS.gene89505:intron | 30.0% | |
| TGTTGTATGCAACTATGAAA+TGG | - | chr5.4:48956502-48956521 | None:intergenic | 30.0% | |
| TTACCATATTTCAGTTTGGT+TGG | - | chr5.4:48959094-48959113 | None:intergenic | 30.0% | |
| TTAGAAAAGCAACTTTCCAT+TGG | - | chr5.4:48957388-48957407 | None:intergenic | 30.0% | |
| TTAGTTCACTTTGCAAGATT+TGG | + | chr5.4:48956328-48956347 | MS.gene89505:intron | 30.0% | |
| TTCTCCATTAGAATAAGACT+AGG | + | chr5.4:48959052-48959071 | MS.gene89505:CDS | 30.0% | |
| TTGTATGCAACTATGAAATG+GGG | - | chr5.4:48956500-48956519 | None:intergenic | 30.0% | |
| TTTCATAGTTGCATACAACA+AGG | + | chr5.4:48956502-48956521 | MS.gene89505:CDS | 30.0% | |
| TTTCCATTTCTACCTTTCTT+TGG | - | chr5.4:48960554-48960573 | None:intergenic | 30.0% | |
| TTTGTGAATGAATCTTGTTC+CGG | - | chr5.4:48958313-48958332 | None:intergenic | 30.0% | |
| ! | AGTCGAGTAATAGTAGTTTT+AGG | - | chr5.4:48960139-48960158 | None:intergenic | 30.0% |
| ! | AGTTACAAATAATGGAAGCA+TGG | + | chr5.4:48960496-48960515 | MS.gene89505:CDS | 30.0% |
| ! | CAAGTCCAACAGTAAATTTT+TGG | - | chr5.4:48957729-48957748 | None:intergenic | 30.0% |
| ! | CTAGTGTAATCACAATTTTC+AGG | + | chr5.4:48958929-48958948 | MS.gene89505:intron | 30.0% |
| ! | GAAATGTCACATTCACATTT+TGG | - | chr5.4:48956934-48956953 | None:intergenic | 30.0% |
| ! | GTTGAGATTACAGAAAGTAT+AGG | - | chr5.4:48954882-48954901 | None:intergenic | 30.0% |
| !! | ATTGAGGCATTTTCTAACTA+CGG | + | chr5.4:48958235-48958254 | MS.gene89505:intron | 30.0% |
| !! | CACAAAAGTACCAAAATAAC+CGG | - | chr5.4:48959568-48959587 | None:intergenic | 30.0% |
| !! | GATTATGTTGTGTTGGTTAT+GGG | + | chr5.4:48959439-48959458 | MS.gene89505:CDS | 30.0% |
| !! | GTAATCACAATTTTCAGGAA+TGG | + | chr5.4:48958934-48958953 | MS.gene89505:intron | 30.0% |
| !! | TAAGCCTAGTCTTATTCTAA+TGG | - | chr5.4:48959059-48959078 | None:intergenic | 30.0% |
| !! | TGATTATGTTGTGTTGGTTA+TGG | + | chr5.4:48959438-48959457 | MS.gene89505:CDS | 30.0% |
| !! | TTTTTGTAACACTGCTGATT+TGG | - | chr5.4:48958990-48959009 | None:intergenic | 30.0% |
| !!! | AATTTGTCGATTTTGGAAGT+GGG | - | chr5.4:48959216-48959235 | None:intergenic | 30.0% |
| !!! | ACAATGGAATTTGTCGATTT+TGG | - | chr5.4:48959223-48959242 | None:intergenic | 30.0% |
| !!! | ACGATTGCAGACTATTTTTA+TGG | - | chr5.4:48959937-48959956 | None:intergenic | 30.0% |
| !!! | GTGAAAGTTGTTGTTTTTGA+CGG | - | chr5.4:48960360-48960379 | None:intergenic | 30.0% |
| !!! | GTTATTTTGGTACTTTTGTG+TGG | + | chr5.4:48959568-48959587 | MS.gene89505:CDS | 30.0% |
| AAATCCAATGAAACAGTTGG+TGG | + | chr5.4:48960571-48960590 | MS.gene89505:CDS | 35.0% | |
| AAGCCAAAGAAAGGTAGAAA+TGG | + | chr5.4:48960548-48960567 | MS.gene89505:CDS | 35.0% | |
| AATACCTTAGAAAAGCGATG+AGG | + | chr5.4:48958076-48958095 | MS.gene89505:intron | 35.0% | |
| AATCCAATGAAACAGTTGGT+GGG | + | chr5.4:48960572-48960591 | MS.gene89505:CDS | 35.0% | |
| ACACTTTACTGCCTATGATT+TGG | + | chr5.4:48956039-48956058 | MS.gene89505:CDS | 35.0% | |
| ATAGTTGCATACAACAAGGA+CGG | + | chr5.4:48956506-48956525 | MS.gene89505:CDS | 35.0% | |
| ATTAAGTTTCCCACCTTCAA+AGG | - | chr5.4:48955987-48956006 | None:intergenic | 35.0% | |
| ATTTATTAACCAAGACGGCA+AGG | + | chr5.4:48956590-48956609 | MS.gene89505:CDS | 35.0% | |
| ATTTGGGCCTATAACTACAA+TGG | - | chr5.4:48959239-48959258 | None:intergenic | 35.0% | |
| CAATGACATGAAGATATGTG+GGG | - | chr5.4:48957660-48957679 | None:intergenic | 35.0% | |
| CTTAGTATAGCAAATGAGAG+TGG | + | chr5.4:48960665-48960684 | MS.gene89505:CDS | 35.0% | |
| CTTCAAAATGACAACGTGAA+TGG | + | chr5.4:48957348-48957367 | MS.gene89505:intron | 35.0% | |
| CTTGATCACTCAATCTTGAT+CGG | + | chr5.4:48959851-48959870 | MS.gene89505:intron | 35.0% | |
| GAAAATGCCTCAATGAGTTT+AGG | - | chr5.4:48958229-48958248 | None:intergenic | 35.0% | |
| GATCAAAGTCAAGAAAGTGA+AGG | + | chr5.4:48959466-48959485 | MS.gene89505:CDS | 35.0% | |
| GGGGACTCAAATAAAAATGT+GGG | - | chr5.4:48957641-48957660 | None:intergenic | 35.0% | |
| GGTAAAGGGATAAGATTGAA+TGG | + | chr5.4:48955055-48955074 | MS.gene89505:CDS | 35.0% | |
| GTATTGAATGAGTGGTTGAT+TGG | - | chr5.4:48960388-48960407 | None:intergenic | 35.0% | |
| GTGATGAAGAATTGGCATTT+GGG | - | chr5.4:48959255-48959274 | None:intergenic | 35.0% | |
| TACAAACTCGTTTCAGAGTT+AGG | + | chr5.4:48960431-48960450 | MS.gene89505:CDS | 35.0% | |
| TAGCTCTTTGAATGATGGTA+AGG | - | chr5.4:48954904-48954923 | None:intergenic | 35.0% | |
| TCGTTACCATATTACAAGGA+CGG | - | chr5.4:48959303-48959322 | None:intergenic | 35.0% | |
| TCTTCATCACAAGTTGTTCT+AGG | + | chr5.4:48959265-48959284 | MS.gene89505:CDS | 35.0% | |
| TGGAAATCCAATGAAACAGT+TGG | + | chr5.4:48960568-48960587 | MS.gene89505:CDS | 35.0% | |
| TGGGGACTCAAATAAAAATG+TGG | - | chr5.4:48957642-48957661 | None:intergenic | 35.0% | |
| TGTATGCAACTATGAAATGG+GGG | - | chr5.4:48956499-48956518 | None:intergenic | 35.0% | |
| TGTGATGAAGAATTGGCATT+TGG | - | chr5.4:48959256-48959275 | None:intergenic | 35.0% | |
| TTTGACGGAAAAGAAGTTGT+AGG | - | chr5.4:48960345-48960364 | None:intergenic | 35.0% | |
| TTTGGATAATTGGAAAGGTG+TGG | + | chr5.4:48956057-48956076 | MS.gene89505:CDS | 35.0% | |
| ! | ACAAAATTGGAGGGATTTTG+TGG | + | chr5.4:48959626-48959645 | MS.gene89505:CDS | 35.0% |
| ! | AGGTGATTATTTATTGGCTG+TGG | + | chr5.4:48960706-48960725 | MS.gene89505:CDS | 35.0% |
| ! | ATAGGATTTTGTAAGAGGGT+TGG | - | chr5.4:48954864-48954883 | None:intergenic | 35.0% |
| ! | ATGTCGATTACTGTCACATT+GGG | + | chr5.4:48960473-48960492 | MS.gene89505:CDS | 35.0% |
| ! | CAAAATTGGAGGGATTTTGT+GGG | + | chr5.4:48959627-48959646 | MS.gene89505:CDS | 35.0% |
| ! | CTGCCTATGATTTGGATAAT+TGG | + | chr5.4:48956047-48956066 | MS.gene89505:CDS | 35.0% |
| ! | GACCTTCAAGATTTTGTCTT+TGG | - | chr5.4:48958030-48958049 | None:intergenic | 35.0% |
| ! | GGTGATTATTTATTGGCTGT+GGG | + | chr5.4:48960707-48960726 | MS.gene89505:CDS | 35.0% |
| ! | GTCTAAAAGACCGGTTATTT+TGG | + | chr5.4:48959555-48959574 | MS.gene89505:CDS | 35.0% |
| ! | TTAGGTCACTTTGCAAGATT+TGG | + | chr5.4:48956459-48956478 | MS.gene89505:intron | 35.0% |
| !! | AAGGTTGATGACAAAATTGG+AGG | + | chr5.4:48959616-48959635 | MS.gene89505:CDS | 35.0% |
| !! | ACTCTGAAACGAGTTTGTAA+CGG | - | chr5.4:48960430-48960449 | None:intergenic | 35.0% |
| !! | AGGTTGATGACAAAATTGGA+GGG | + | chr5.4:48959617-48959636 | MS.gene89505:CDS | 35.0% |
| !! | ATTTTGGTACTTTTGTGTGG+TGG | + | chr5.4:48959571-48959590 | MS.gene89505:CDS | 35.0% |
| !! | CACATTCACATTTTGGTGAA+TGG | - | chr5.4:48956927-48956946 | None:intergenic | 35.0% |
| !! | CACTCTCATTTGCTATACTA+AGG | - | chr5.4:48960667-48960686 | None:intergenic | 35.0% |
| !! | CTTCTTTTGATTCCAAGCTT+TGG | + | chr5.4:48955131-48955150 | MS.gene89505:CDS | 35.0% |
| !! | GCTAAGGTTGATGACAAAAT+TGG | + | chr5.4:48959613-48959632 | MS.gene89505:CDS | 35.0% |
| !! | GTCTTTAGCTCTTTGAATGA+TGG | - | chr5.4:48954909-48954928 | None:intergenic | 35.0% |
| !! | TGTTTTGAGCATACTCTATC+TGG | - | chr5.4:48959124-48959143 | None:intergenic | 35.0% |
| !!! | GAATTTGTCGATTTTGGAAG+TGG | - | chr5.4:48959217-48959236 | None:intergenic | 35.0% |
| !!! | GTTTTCGAGTATTGAATGAG+TGG | - | chr5.4:48960396-48960415 | None:intergenic | 35.0% |
| !!! | TCGCTTTTCTAAGGTATTGT+CGG | - | chr5.4:48958074-48958093 | None:intergenic | 35.0% |
| AAGAACATTGTGTGTCATCC+TGG | + | chr5.4:48959349-48959368 | MS.gene89505:CDS | 40.0% | |
| ACATATTTAGGGACCCAAGA+TGG | + | chr5.4:48955876-48955895 | MS.gene89505:CDS | 40.0% | |
| AGAACCTATCGTTTCTACAC+AGG | + | chr5.4:48960272-48960291 | MS.gene89505:CDS | 40.0% | |
| AGCGTAGATGAAAACTTACC+AGG | - | chr5.4:48959715-48959734 | None:intergenic | 40.0% | |
| AGGTTGTACTGCACAAATTG+TGG | - | chr5.4:48957783-48957802 | None:intergenic | 40.0% | |
| ATATTTAGGGACCCAAGATG+GGG | + | chr5.4:48955878-48955897 | MS.gene89505:CDS | 40.0% | |
| ATCGACACTAATGAGCTAAG+TGG | - | chr5.4:48958155-48958174 | None:intergenic | 40.0% | |
| ATTGTACACTGCTCTTGCTT+CGG | - | chr5.4:48955813-48955832 | None:intergenic | 40.0% | |
| CAATGTGACAGTAATCGACA+TGG | - | chr5.4:48960474-48960493 | None:intergenic | 40.0% | |
| CAGCAGTGAGAATAACTTGA+GGG | - | chr5.4:48955111-48955130 | None:intergenic | 40.0% | |
| CATATTTAGGGACCCAAGAT+GGG | + | chr5.4:48955877-48955896 | MS.gene89505:CDS | 40.0% | |
| CTGTTTGTGAAGCCAAAGAA+AGG | + | chr5.4:48960539-48960558 | MS.gene89505:CDS | 40.0% | |
| CTTCAAGGAGATTCCTTTGA+AGG | + | chr5.4:48955971-48955990 | MS.gene89505:CDS | 40.0% | |
| GATCGCAGTGTGACTAAAAA+GGG | + | chr5.4:48960030-48960049 | MS.gene89505:intron | 40.0% | |
| GCGTAGATGAAAACTTACCA+GGG | - | chr5.4:48959714-48959733 | None:intergenic | 40.0% | |
| GCGTTGCAGATTATGGTAAA+GGG | + | chr5.4:48955041-48955060 | MS.gene89505:CDS | 40.0% | |
| GGCTGTCAATATACTTCCAA+TGG | + | chr5.4:48957369-48957388 | MS.gene89505:intron | 40.0% | |
| GGTGTTAAGGTGATTGAAGA+AGG | + | chr5.4:48960686-48960705 | MS.gene89505:CDS | 40.0% | |
| GTAGAAACGATAGGTTCTAC+CGG | - | chr5.4:48960270-48960289 | None:intergenic | 40.0% | |
| GTATACCTAGTTACCAATGG+TGG | + | chr5.4:48955002-48955021 | MS.gene89505:CDS | 40.0% | |
| TAGAAACGATAGGTTCTACC+GGG | - | chr5.4:48960269-48960288 | None:intergenic | 40.0% | |
| TCCAATTTGTGCGTGATGTT+GGG | + | chr5.4:48955391-48955410 | MS.gene89505:intron | 40.0% | |
| TCGGTATACCTAGTTACCAA+TGG | + | chr5.4:48954999-48955018 | MS.gene89505:CDS | 40.0% | |
| TCTTATGTGAGAGGACTTCA+AGG | + | chr5.4:48955956-48955975 | MS.gene89505:CDS | 40.0% | |
| TGATCGCAGTGTGACTAAAA+AGG | + | chr5.4:48960029-48960048 | MS.gene89505:intron | 40.0% | |
| TTTGTTCCATCACTACATCC+AGG | - | chr5.4:48959370-48959389 | None:intergenic | 40.0% | |
| ! | AAAGGCATGTCCATGAGTTA+AGG | - | chr5.4:48958004-48958023 | None:intergenic | 40.0% |
| ! | AAGGAGATTCCTTTGAAGGT+GGG | + | chr5.4:48955975-48955994 | MS.gene89505:CDS | 40.0% |
| ! | ACAAATAATGGAAGCATGGC+TGG | + | chr5.4:48960500-48960519 | MS.gene89505:CDS | 40.0% |
| ! | AGCAAATGAGAGTGGTGTTA+AGG | + | chr5.4:48960673-48960692 | MS.gene89505:CDS | 40.0% |
| ! | AGTTTGGAACTCCATTGACA+CGG | - | chr5.4:48956558-48956577 | None:intergenic | 40.0% |
| ! | ATCCAATGAAACAGTTGGTG+GGG | + | chr5.4:48960573-48960592 | MS.gene89505:CDS | 40.0% |
| ! | CATGTCGATTACTGTCACAT+TGG | + | chr5.4:48960472-48960491 | MS.gene89505:CDS | 40.0% |
| ! | TCAAGTTTGTTTGCGTGCTT+TGG | - | chr5.4:48958288-48958307 | None:intergenic | 40.0% |
| ! | TGCTAAAGCGTCTAAAAGAC+CGG | + | chr5.4:48959546-48959565 | MS.gene89505:CDS | 40.0% |
| ! | TTATTTATTGGCTGTGGGAG+AGG | + | chr5.4:48960712-48960731 | MS.gene89505:CDS | 40.0% |
| ! | TTGATTCCAAGCTTTGGTAC+CGG | + | chr5.4:48955137-48955156 | MS.gene89505:CDS | 40.0% |
| ! | TTTTGGCCGTCCTTGTAATA+TGG | + | chr5.4:48959294-48959313 | MS.gene89505:CDS | 40.0% |
| !! | ATAAGTTCCTGTTGTTTCCC+TGG | - | chr5.4:48959517-48959536 | None:intergenic | 40.0% |
| !! | TACTGTTGGACTTGGTGTAA+AGG | + | chr5.4:48957735-48957754 | MS.gene89505:intron | 40.0% |
| !! | TCTTTTGGGTACCATGTCAT+TGG | - | chr5.4:48960188-48960207 | None:intergenic | 40.0% |
| !! | TGTTGTGTTGGTTATGGGAT+TGG | + | chr5.4:48959444-48959463 | MS.gene89505:CDS | 40.0% |
| !! | TTCTAAGGTATTGTCGGCTT+TGG | - | chr5.4:48958068-48958087 | None:intergenic | 40.0% |
| !! | TTTTGGAAGTGGGAGAATTG+AGG | - | chr5.4:48959206-48959225 | None:intergenic | 40.0% |
| AACCCCACCAACTGTTTCAT+TGG | - | chr5.4:48960578-48960597 | None:intergenic | 45.0% | |
| AAGGTCTACGAATTCGGCTA+TGG | + | chr5.4:48960299-48960318 | MS.gene89505:CDS | 45.0% | |
| ACAATGCTGGACAAGCAGAA+GGG | + | chr5.4:48955828-48955847 | MS.gene89505:CDS | 45.0% | |
| AGAGATGACTTAGAGTTGCC+AGG | + | chr5.4:48959496-48959515 | MS.gene89505:CDS | 45.0% | |
| ATACAACAAGGACGGTCTAG+TGG | + | chr5.4:48956514-48956533 | MS.gene89505:CDS | 45.0% | |
| ATTTGACATGGCTGCAATCG+TGG | - | chr5.4:48959979-48959998 | None:intergenic | 45.0% | |
| CACGCAAACAAACTTGAGTC+CGG | + | chr5.4:48958291-48958310 | MS.gene89505:intron | 45.0% | |
| CCAAGACGGCAAGGAAAAAA+TGG | + | chr5.4:48956599-48956618 | MS.gene89505:CDS | 45.0% | |
| CCTTAGAAAAGCGATGAGGA+CGG | + | chr5.4:48958080-48958099 | MS.gene89505:intron | 45.0% | |
| CTCACTCTCATGTCTGTCAT+TGG | - | chr5.4:48960224-48960243 | None:intergenic | 45.0% | |
| CTCCAATTTGTGCGTGATGT+TGG | + | chr5.4:48955390-48955409 | MS.gene89505:intron | 45.0% | |
| CTTTAGCAACTTCGACTGCT+TGG | - | chr5.4:48959414-48959433 | None:intergenic | 45.0% | |
| GAGATGACTTAGAGTTGCCA+GGG | + | chr5.4:48959497-48959516 | MS.gene89505:CDS | 45.0% | |
| GAGCTAAAGACATCGTGTCA+CGG | + | chr5.4:48954918-48954937 | MS.gene89505:CDS | 45.0% | |
| GCAGCAGTGAGAATAACTTG+AGG | - | chr5.4:48955112-48955131 | None:intergenic | 45.0% | |
| GGCGTTGCAGATTATGGTAA+AGG | + | chr5.4:48955040-48955059 | MS.gene89505:CDS | 45.0% | |
| GGTCCAAAGGTCTACGAATT+CGG | + | chr5.4:48960293-48960312 | MS.gene89505:CDS | 45.0% | |
| GTAGCAGATGTACTTCAAGC+TGG | + | chr5.4:48957059-48957078 | MS.gene89505:CDS | 45.0% | |
| TAACTAGGTATACCGAGTCG+AGG | - | chr5.4:48954995-48955014 | None:intergenic | 45.0% | |
| TACAATGCTGGACAAGCAGA+AGG | + | chr5.4:48955827-48955846 | MS.gene89505:CDS | 45.0% | |
| TAGCCGAATTCGTAGACCTT+TGG | - | chr5.4:48960299-48960318 | None:intergenic | 45.0% | |
| TCCATATCTCAAGATGCGAC+TGG | - | chr5.4:48959814-48959833 | None:intergenic | 45.0% | |
| TCCCAACATCACGCACAAAT+TGG | - | chr5.4:48955395-48955414 | None:intergenic | 45.0% | |
| TCGTTTCTACACAGGTCCAA+AGG | + | chr5.4:48960280-48960299 | MS.gene89505:CDS | 45.0% | |
| TGAGCACTCTCCTTAACTCA+TGG | + | chr5.4:48957991-48958010 | MS.gene89505:intron | 45.0% | |
| TGGACCTGTGTAGAAACGAT+AGG | - | chr5.4:48960279-48960298 | None:intergenic | 45.0% | |
| TGTCATCCTGGATGTAGTGA+TGG | + | chr5.4:48959361-48959380 | MS.gene89505:CDS | 45.0% | |
| TGTGCTTACAACCGTGTCAA+TGG | + | chr5.4:48956544-48956563 | MS.gene89505:CDS | 45.0% | |
| TGTGTGTGTGTGAAGGTGAT+TGG | + | chr5.4:48955785-48955804 | MS.gene89505:intron | 45.0% | |
| ! | AAGCAGAAGGGATGACGTTT+TGG | + | chr5.4:48955840-48955859 | MS.gene89505:CDS | 45.0% |
| ! | AGCAGAAGGGATGACGTTTT+GGG | + | chr5.4:48955841-48955860 | MS.gene89505:CDS | 45.0% |
| ! | CAAGGAGATTCCTTTGAAGG+TGG | + | chr5.4:48955974-48955993 | MS.gene89505:CDS | 45.0% |
| ! | GGATTTTGTAAGAGGGTTGG+TGG | - | chr5.4:48954861-48954880 | None:intergenic | 45.0% |
| ! | GGTCACTTTGCAAGATTTGG+AGG | + | chr5.4:48956462-48956481 | MS.gene89505:intron | 45.0% |
| ! | GTGTTTGGTGACTATAACCC+TGG | + | chr5.4:48959694-48959713 | MS.gene89505:CDS | 45.0% |
| ! | TCACTCCACCATTGGTAACT+AGG | - | chr5.4:48955010-48955029 | None:intergenic | 45.0% |
| !! | AGGTTATGCAAAAGCACCTG+AGG | + | chr5.4:48957031-48957050 | MS.gene89505:CDS | 45.0% |
| !! | CAGCTTCTAGAGCCATGTTT+AGG | - | chr5.4:48959150-48959169 | None:intergenic | 45.0% |
| !! | GCACGGTCGATTTGAGATAT+CGG | - | chr5.4:48959019-48959038 | None:intergenic | 45.0% |
| !! | GGGTACATGAGTTGGTGAAT+CGG | - | chr5.4:48954822-48954841 | None:intergenic | 45.0% |
| !!! | ATTTTGTGGGCTGGTTATCC+TGG | + | chr5.4:48959640-48959659 | MS.gene89505:CDS | 45.0% |
| !!! | CCATTTTTTCCTTGCCGTCT+TGG | - | chr5.4:48956602-48956621 | None:intergenic | 45.0% |
| !!! | TAATTAAAATCAATTTTTTT+AGG | - | chr5.4:48957803-48957822 | None:intergenic | 5.0% |
| ACATCTGCTACAGCATCCTC+AGG | - | chr5.4:48957050-48957069 | None:intergenic | 50.0% | |
| ACTAATGGGATGCTTGCAGG+GGG | + | chr5.4:48960156-48960175 | MS.gene89505:intron | 50.0% | |
| ACTGATCCGGTACCAAAGCT+TGG | - | chr5.4:48955146-48955165 | None:intergenic | 50.0% | |
| AGAGTTGCCAGGGAAACAAC+AGG | + | chr5.4:48959507-48959526 | MS.gene89505:CDS | 50.0% | |
| AGTGACCAACCCTACTGATC+CGG | - | chr5.4:48955159-48955178 | None:intergenic | 50.0% | |
| ATACCGAGTCGAGGAATAGG+TGG | - | chr5.4:48954986-48955005 | None:intergenic | 50.0% | |
| CATCGTGTCACGGCTTACAT+TGG | + | chr5.4:48954928-48954947 | MS.gene89505:CDS | 50.0% | |
| CGACTAATGGGATGCTTGCA+GGG | + | chr5.4:48960154-48960173 | MS.gene89505:intron | 50.0% | |
| GACTAATGGGATGCTTGCAG+GGG | + | chr5.4:48960155-48960174 | MS.gene89505:intron | 50.0% | |
| GATCCATCATCAGGCTATCC+CGG | + | chr5.4:48960248-48960267 | MS.gene89505:CDS | 50.0% | |
| GCAAGAGCAGTGTACAATGC+TGG | + | chr5.4:48955815-48955834 | MS.gene89505:CDS | 50.0% | |
| GCCAGTCGCATCTTGAGATA+TGG | + | chr5.4:48959810-48959829 | MS.gene89505:intron | 50.0% | |
| GCTGGTTATCCTGGTGAACT+TGG | + | chr5.4:48959649-48959668 | MS.gene89505:CDS | 50.0% | |
| GGAACGTTGACGCTAGAATG+AGG | + | chr5.4:48958101-48958120 | MS.gene89505:intron | 50.0% | |
| GGCTTCACAAACAGCAACAC+AGG | - | chr5.4:48960533-48960552 | None:intergenic | 50.0% | |
| GGTATACCGAGTCGAGGAAT+AGG | - | chr5.4:48954989-48955008 | None:intergenic | 50.0% | |
| GGTTATCCTGGTGAACTTGG+TGG | + | chr5.4:48959652-48959671 | MS.gene89505:CDS | 50.0% | |
| GTGAATCGGCATGAACGAGT+TGG | - | chr5.4:48954808-48954827 | None:intergenic | 50.0% | |
| GTGAGAGCTGATCCATCATC+AGG | + | chr5.4:48960239-48960258 | MS.gene89505:CDS | 50.0% | |
| TCAACACTCGTGTGTGGCTT+AGG | - | chr5.4:48958128-48958147 | None:intergenic | 50.0% | |
| TCGACTAATGGGATGCTTGC+AGG | + | chr5.4:48960153-48960172 | MS.gene89505:intron | 50.0% | |
| TTGCACGGCGTTGCAGATTA+TGG | + | chr5.4:48955034-48955053 | MS.gene89505:CDS | 50.0% | |
| ! | AGCTTTGGTACCGGATCAGT+AGG | + | chr5.4:48955146-48955165 | MS.gene89505:CDS | 50.0% |
| ! | ATTGGAGGGATTTTGTGGGC+TGG | + | chr5.4:48959631-48959650 | MS.gene89505:CDS | 50.0% |
| ! | GAGTAAGGGGGTACATGAGT+TGG | - | chr5.4:48954830-48954849 | None:intergenic | 50.0% |
| ! | GCTCTTGCTCAGGTTGTGTT+TGG | + | chr5.4:48959679-48959698 | MS.gene89505:CDS | 50.0% |
| ! | GCTTTGGTACCGGATCAGTA+GGG | + | chr5.4:48955147-48955166 | MS.gene89505:CDS | 50.0% |
| ! | TCCTGGTGAACTTGGTGGAA+TGG | + | chr5.4:48959657-48959676 | MS.gene89505:CDS | 50.0% |
| !! | CCGTCCTCATCGCTTTTCTA+AGG | - | chr5.4:48958083-48958102 | None:intergenic | 50.0% |
| !! | GCTCTAGAAGCTGCAAGAAG+CGG | + | chr5.4:48959157-48959176 | MS.gene89505:CDS | 50.0% |
| !! | TGGTGGTGTCACAGGAGTAA+GGG | - | chr5.4:48954844-48954863 | None:intergenic | 50.0% |
| !! | TTGGTGGTGTCACAGGAGTA+AGG | - | chr5.4:48954845-48954864 | None:intergenic | 50.0% |
| CTACCGGGATAGCCTGATGA+TGG | - | chr5.4:48960254-48960273 | None:intergenic | 55.0% | |
| CTTGCCCTCTTCCCCATCTT+GGG | - | chr5.4:48955892-48955911 | None:intergenic | 55.0% | |
| GACAGCTGGTGAAGACCCTT+TGG | + | chr5.4:48955913-48955932 | MS.gene89505:CDS | 55.0% | |
| GCAACGCTTCACTCCACCAT+TGG | - | chr5.4:48955018-48955037 | None:intergenic | 55.0% | |
| GCCATTCCACCAAGTTCACC+AGG | - | chr5.4:48959661-48959680 | None:intergenic | 55.0% | |
| GCTCCACCTATTCCTCGACT+CGG | + | chr5.4:48954980-48954999 | MS.gene89505:CDS | 55.0% | |
| GGCTTGTCAACACTCGTGTG+TGG | - | chr5.4:48958134-48958153 | None:intergenic | 55.0% | |
| GGGGGAGACTACCAATGACA+TGG | + | chr5.4:48960174-48960193 | MS.gene89505:intron | 55.0% | |
| TCTTGCCCTCTTCCCCATCT+TGG | - | chr5.4:48955893-48955912 | None:intergenic | 55.0% | |
| TGGGGTGTGTGTGTGTGTGA+AGG | + | chr5.4:48955778-48955797 | MS.gene89505:intron | 55.0% | |
| TGGTGGAATGGCTCTTGCTC+AGG | + | chr5.4:48959669-48959688 | MS.gene89505:CDS | 55.0% | |
| ! | GAGAGTGTGAAGGTGGAAGC+AGG | + | chr5.4:48960599-48960618 | MS.gene89505:CDS | 55.0% |
| ! | GGGGTTTGAGAGTGTGAAGG+TGG | + | chr5.4:48960592-48960611 | MS.gene89505:CDS | 55.0% |
| ! | GGTGGGGTTTGAGAGTGTGA+AGG | + | chr5.4:48960589-48960608 | MS.gene89505:CDS | 55.0% |
| ! | TGGTACCGGATCAGTAGGGT+TGG | + | chr5.4:48955151-48955170 | MS.gene89505:intron | 55.0% |
| !! | AAGAGGGTTGGTGGTGTCAC+AGG | - | chr5.4:48954852-48954871 | None:intergenic | 55.0% |
| !! | GGTGGTGTCACAGGAGTAAG+GGG | - | chr5.4:48954843-48954862 | None:intergenic | 55.0% |
| !! | GTGGTGTCACAGGAGTAAGG+GGG | - | chr5.4:48954842-48954861 | None:intergenic | 55.0% |
| !! | TGGTGGAGTGAAGCGTTGCA+CGG | + | chr5.4:48955019-48955038 | MS.gene89505:CDS | 55.0% |
| AGGGACCCAAGATGGGGAAG+AGG | + | chr5.4:48955884-48955903 | MS.gene89505:CDS | 60.0% | |
| GCAGGTGAAACGCGCGAAGT+TGG | + | chr5.4:48960617-48960636 | MS.gene89505:CDS | 60.0% | |
| GGAAGAGGGCAAGAGACAGC+TGG | + | chr5.4:48955899-48955918 | MS.gene89505:CDS | 60.0% | |
| GGGACCCAAGATGGGGAAGA+GGG | + | chr5.4:48955885-48955904 | MS.gene89505:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 48954746 | 48960763 | 48954746 | ID=MS.gene89505 |
| chr5.4 | mRNA | 48954746 | 48960763 | 48954746 | ID=MS.gene89505.t1;Parent=MS.gene89505 |
| chr5.4 | exon | 48954746 | 48955168 | 48954746 | ID=MS.gene89505.t1.exon1;Parent=MS.gene89505.t1 |
| chr5.4 | CDS | 48954746 | 48955168 | 48954746 | ID=cds.MS.gene89505.t1;Parent=MS.gene89505.t1 |
| chr5.4 | exon | 48955800 | 48956102 | 48955800 | ID=MS.gene89505.t1.exon2;Parent=MS.gene89505.t1 |
| chr5.4 | CDS | 48955800 | 48956102 | 48955800 | ID=cds.MS.gene89505.t1;Parent=MS.gene89505.t1 |
| chr5.4 | exon | 48956463 | 48956632 | 48956463 | ID=MS.gene89505.t1.exon3;Parent=MS.gene89505.t1 |
| chr5.4 | CDS | 48956463 | 48956632 | 48956463 | ID=cds.MS.gene89505.t1;Parent=MS.gene89505.t1 |
| chr5.4 | exon | 48957028 | 48957080 | 48957028 | ID=MS.gene89505.t1.exon4;Parent=MS.gene89505.t1 |
| chr5.4 | CDS | 48957028 | 48957080 | 48957028 | ID=cds.MS.gene89505.t1;Parent=MS.gene89505.t1 |
| chr5.4 | exon | 48958951 | 48959719 | 48958951 | ID=MS.gene89505.t1.exon5;Parent=MS.gene89505.t1 |
| chr5.4 | CDS | 48958951 | 48959719 | 48958951 | ID=cds.MS.gene89505.t1;Parent=MS.gene89505.t1 |
| chr5.4 | exon | 48960175 | 48960763 | 48960175 | ID=MS.gene89505.t1.exon6;Parent=MS.gene89505.t1 |
| chr5.4 | CDS | 48960175 | 48960763 | 48960175 | ID=cds.MS.gene89505.t1;Parent=MS.gene89505.t1 |
| Gene Sequence |
| Protein sequence |
