Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89508.t1 | XP_003615008.2 | 96.9 | 782 | 21 | 1 | 1 | 779 | 1 | 782 | 0.00E+00 | 1548.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89508.t1 | Q9SGZ5 | 63.7 | 753 | 262 | 6 | 31 | 779 | 22 | 767 | 2.6e-290 | 999.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89508.t1 | G7KA64 | 96.9 | 782 | 21 | 1 | 1 | 779 | 1 | 782 | 0.0e+00 | 1548.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060587 | MS.gene89508 | 0.808225 | 3.44E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene025671 | MS.gene89508 | PPI |
| MS.gene068643 | MS.gene89508 | PPI |
| MS.gene89508 | MS.gene005527 | PPI |
| MS.gene002171 | MS.gene89508 | PPI |
| MS.gene036268 | MS.gene89508 | PPI |
| MS.gene89508 | MS.gene20796 | PPI |
| MS.gene71615 | MS.gene89508 | PPI |
| MS.gene00195 | MS.gene89508 | PPI |
| MS.gene70386 | MS.gene89508 | PPI |
| MS.gene058203 | MS.gene89508 | PPI |
| MS.gene28801 | MS.gene89508 | PPI |
| MS.gene069177 | MS.gene89508 | PPI |
| MS.gene07274 | MS.gene89508 | PPI |
| MS.gene027856 | MS.gene89508 | PPI |
| MS.gene20846 | MS.gene89508 | PPI |
| MS.gene96691 | MS.gene89508 | PPI |
| MS.gene051339 | MS.gene89508 | PPI |
| MS.gene91308 | MS.gene89508 | PPI |
| MS.gene86920 | MS.gene89508 | PPI |
| MS.gene071952 | MS.gene89508 | PPI |
| MS.gene028420 | MS.gene89508 | PPI |
| MS.gene047087 | MS.gene89508 | PPI |
| MS.gene35037 | MS.gene89508 | PPI |
| MS.gene072706 | MS.gene89508 | PPI |
| MS.gene07041 | MS.gene89508 | PPI |
| MS.gene56021 | MS.gene89508 | PPI |
| MS.gene01140 | MS.gene89508 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89508.t1 | MTR_5g062430 | 96.931 | 782 | 21 | 1 | 1 | 779 | 1 | 782 | 0.0 | 1575 |
| MS.gene89508.t1 | MTR_5g062320 | 91.026 | 780 | 69 | 1 | 1 | 779 | 1 | 780 | 0.0 | 1465 |
| MS.gene89508.t1 | MTR_5g062370 | 89.770 | 782 | 77 | 1 | 1 | 779 | 1 | 782 | 0.0 | 1438 |
| MS.gene89508.t1 | MTR_5g062650 | 86.242 | 785 | 102 | 3 | 1 | 779 | 1 | 785 | 0.0 | 1384 |
| MS.gene89508.t1 | MTR_3g074060 | 69.858 | 773 | 226 | 3 | 8 | 779 | 10 | 776 | 0.0 | 1159 |
| MS.gene89508.t1 | MTR_5g062370 | 88.075 | 587 | 67 | 1 | 1 | 584 | 1 | 587 | 0.0 | 1077 |
| MS.gene89508.t1 | MTR_5g030860 | 48.232 | 792 | 376 | 12 | 5 | 779 | 8 | 782 | 0.0 | 758 |
| MS.gene89508.t1 | MTR_1g106860 | 49.221 | 770 | 368 | 14 | 8 | 769 | 5 | 759 | 0.0 | 743 |
| MS.gene89508.t1 | MTR_2g034720 | 47.503 | 781 | 379 | 12 | 1 | 777 | 1 | 754 | 0.0 | 733 |
| MS.gene89508.t1 | MTR_2g008240 | 47.449 | 784 | 382 | 13 | 5 | 779 | 13 | 775 | 0.0 | 731 |
| MS.gene89508.t1 | MTR_4g094285 | 46.429 | 784 | 390 | 13 | 5 | 779 | 12 | 774 | 0.0 | 721 |
| MS.gene89508.t1 | MTR_7g109390 | 47.200 | 750 | 375 | 10 | 33 | 777 | 28 | 761 | 0.0 | 720 |
| MS.gene89508.t1 | MTR_1g087240 | 46.530 | 778 | 386 | 12 | 5 | 777 | 3 | 755 | 0.0 | 719 |
| MS.gene89508.t1 | MTR_6g028090 | 27.607 | 652 | 337 | 27 | 54 | 635 | 35 | 621 | 2.76e-41 | 160 |
| MS.gene89508.t1 | MTR_6g028120 | 27.581 | 649 | 341 | 30 | 54 | 635 | 16 | 602 | 9.93e-41 | 159 |
| MS.gene89508.t1 | MTR_3g462820 | 27.483 | 604 | 346 | 23 | 46 | 592 | 21 | 589 | 2.57e-40 | 157 |
| MS.gene89508.t1 | MTR_2g030000 | 27.417 | 631 | 331 | 27 | 54 | 610 | 37 | 614 | 1.29e-39 | 156 |
| MS.gene89508.t1 | MTR_3g079750 | 26.372 | 656 | 352 | 28 | 54 | 641 | 35 | 627 | 3.68e-39 | 154 |
| MS.gene89508.t1 | MTR_6g028100 | 27.259 | 664 | 346 | 30 | 43 | 635 | 24 | 621 | 4.36e-39 | 154 |
| MS.gene89508.t1 | MTR_7g086030 | 27.246 | 668 | 337 | 29 | 45 | 635 | 2 | 597 | 1.28e-38 | 152 |
| MS.gene89508.t1 | MTR_7g086030 | 27.477 | 666 | 334 | 29 | 47 | 635 | 29 | 622 | 1.85e-38 | 152 |
| MS.gene89508.t1 | MTR_6g028110 | 26.510 | 679 | 360 | 32 | 33 | 639 | 15 | 626 | 5.94e-38 | 151 |
| MS.gene89508.t1 | MTR_6g028110 | 26.596 | 658 | 344 | 31 | 54 | 639 | 36 | 626 | 1.22e-37 | 150 |
| MS.gene89508.t1 | MTR_5g069800 | 25.493 | 608 | 354 | 23 | 46 | 592 | 4 | 573 | 1.27e-34 | 140 |
| MS.gene89508.t1 | MTR_5g069740 | 25.083 | 602 | 352 | 21 | 46 | 592 | 4 | 561 | 4.41e-30 | 126 |
| MS.gene89508.t1 | MTR_7g086010 | 26.339 | 448 | 245 | 18 | 47 | 433 | 29 | 452 | 9.32e-24 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89508.t1 | AT1G78060 | 63.878 | 753 | 261 | 7 | 31 | 779 | 22 | 767 | 0.0 | 1007 |
| MS.gene89508.t1 | AT5G10560 | 48.920 | 787 | 375 | 8 | 12 | 777 | 10 | 790 | 0.0 | 779 |
| MS.gene89508.t1 | AT5G09730 | 49.045 | 785 | 371 | 14 | 4 | 779 | 9 | 773 | 0.0 | 745 |
| MS.gene89508.t1 | AT3G19620 | 50.067 | 747 | 348 | 14 | 33 | 769 | 27 | 758 | 0.0 | 745 |
| MS.gene89508.t1 | AT1G02640 | 47.674 | 774 | 377 | 12 | 8 | 777 | 9 | 758 | 0.0 | 731 |
| MS.gene89508.t1 | AT5G64570 | 48.724 | 784 | 374 | 14 | 5 | 779 | 20 | 784 | 0.0 | 730 |
| MS.gene89508.t1 | AT5G49360 | 47.382 | 783 | 375 | 17 | 6 | 777 | 14 | 770 | 0.0 | 717 |
| MS.gene89508.t1 | AT5G64570 | 52.249 | 578 | 266 | 8 | 12 | 587 | 23 | 592 | 0.0 | 607 |
| MS.gene89508.t1 | AT5G64570 | 48.830 | 641 | 305 | 11 | 147 | 779 | 1 | 626 | 0.0 | 605 |
| MS.gene89508.t1 | AT5G09700 | 45.194 | 489 | 255 | 7 | 297 | 779 | 45 | 526 | 1.41e-135 | 412 |
| MS.gene89508.t1 | AT3G47040 | 26.852 | 648 | 376 | 26 | 43 | 638 | 6 | 607 | 5.70e-44 | 168 |
| MS.gene89508.t1 | AT3G47040 | 26.165 | 665 | 384 | 27 | 43 | 638 | 6 | 632 | 2.42e-41 | 161 |
| MS.gene89508.t1 | AT3G47010 | 25.848 | 619 | 377 | 25 | 44 | 610 | 8 | 596 | 2.54e-41 | 160 |
| MS.gene89508.t1 | AT3G47000 | 26.512 | 645 | 374 | 25 | 44 | 635 | 7 | 604 | 8.78e-41 | 159 |
| MS.gene89508.t1 | AT3G47010 | 25.687 | 619 | 377 | 26 | 44 | 610 | 8 | 595 | 1.22e-39 | 155 |
| MS.gene89508.t1 | AT3G47050 | 26.721 | 610 | 352 | 23 | 43 | 594 | 6 | 578 | 1.94e-37 | 149 |
| MS.gene89508.t1 | AT5G04885 | 25.118 | 633 | 368 | 24 | 45 | 614 | 45 | 634 | 6.53e-37 | 148 |
| MS.gene89508.t1 | AT5G04885 | 25.118 | 633 | 368 | 24 | 45 | 614 | 28 | 617 | 7.53e-37 | 148 |
| MS.gene89508.t1 | AT5G04885 | 25.118 | 633 | 368 | 24 | 45 | 614 | 28 | 617 | 7.53e-37 | 148 |
| MS.gene89508.t1 | AT3G47040 | 29.613 | 439 | 242 | 17 | 43 | 433 | 6 | 425 | 1.47e-34 | 138 |
| MS.gene89508.t1 | AT5G20950 | 25.229 | 654 | 357 | 25 | 54 | 639 | 33 | 622 | 1.13e-33 | 138 |
| MS.gene89508.t1 | AT5G20950 | 25.229 | 654 | 357 | 25 | 54 | 639 | 33 | 622 | 1.13e-33 | 138 |
| MS.gene89508.t1 | AT3G47000 | 29.108 | 426 | 234 | 16 | 44 | 421 | 7 | 412 | 1.51e-32 | 132 |
| MS.gene89508.t1 | AT3G47040 | 25.148 | 676 | 385 | 29 | 43 | 638 | 6 | 640 | 3.04e-32 | 134 |
| MS.gene89508.t1 | AT5G20950 | 27.818 | 417 | 230 | 16 | 54 | 421 | 111 | 505 | 6.03e-32 | 133 |
| MS.gene89508.t1 | AT3G47010 | 27.938 | 451 | 251 | 19 | 44 | 445 | 8 | 433 | 1.96e-31 | 129 |
| MS.gene89508.t1 | AT5G20940 | 26.897 | 580 | 326 | 24 | 83 | 634 | 112 | 621 | 8.43e-31 | 129 |
| MS.gene89508.t1 | AT3G62710 | 25.896 | 614 | 347 | 28 | 59 | 634 | 105 | 648 | 4.30e-30 | 127 |
| MS.gene89508.t1 | AT3G47010 | 25.459 | 436 | 284 | 19 | 193 | 610 | 5 | 417 | 2.97e-26 | 112 |
| MS.gene89508.t1 | AT3G47000 | 25.758 | 462 | 289 | 19 | 191 | 635 | 3 | 427 | 9.84e-25 | 108 |
| MS.gene89508.t1 | AT3G47050 | 27.467 | 375 | 214 | 12 | 43 | 374 | 6 | 365 | 1.62e-24 | 107 |
Find 190 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAATTGGAGGGATTATT+TGG | 0.068417 | 5.4:-48847510 | MS.gene89508:CDS |
| GGTCCAAAAGTTTATGAATT+TGG | 0.135968 | 5.4:-48846464 | MS.gene89508:CDS |
| AACAACCTTCGATGATTTAT+TGG | 0.140120 | 5.4:+48847876 | None:intergenic |
| AATAAGTGATTATGTAATTT+TGG | 0.149333 | 5.4:-48847704 | MS.gene89508:CDS |
| TTCTAAGAAGCCGGTTATTT+TGG | 0.173735 | 5.4:-48847581 | MS.gene89508:CDS |
| CACCAAACATAAATATATTT+AGG | 0.186343 | 5.4:-48851129 | MS.gene89508:CDS |
| GCTAAGAATAATGACAAAAT+TGG | 0.212120 | 5.4:-48847523 | MS.gene89508:CDS |
| TTTCCATTTCTACCTTTCTT+TGG | 0.223144 | 5.4:+48846206 | None:intergenic |
| TTTGAAGGTGGGAAACTAAT+TGG | 0.232375 | 5.4:-48851007 | MS.gene89508:CDS |
| AAATTGTAATCTGCACAATT+TGG | 0.238972 | 5.4:+48850032 | None:intergenic |
| TAGCCAAATTCATAAACTTT+TGG | 0.248557 | 5.4:+48846461 | None:intergenic |
| AAGCTCAAGGGATGACGTTT+TGG | 0.256760 | 5.4:-48851153 | MS.gene89508:CDS |
| TCTTGTCCTCTTCCCCATCT+TGG | 0.274411 | 5.4:+48851103 | None:intergenic |
| GTAAATACCCTTGGAGTTAT+AGG | 0.279725 | 5.4:-48847907 | MS.gene89508:CDS |
| TCAGGTTACTTTGCAAGATT+TGG | 0.289491 | 5.4:-48850144 | MS.gene89508:intron |
| CTGATTCGGTACCAAAGTTT+AGG | 0.291395 | 5.4:+48851530 | None:intergenic |
| TCGATGATTTATTGGCATTA+GGG | 0.313442 | 5.4:+48847884 | None:intergenic |
| AGATTAGTACCAATATTAAA+AGG | 0.321384 | 5.4:-48847826 | MS.gene89508:CDS |
| AACCGGCTTCTTAGAAGCTT+TGG | 0.321699 | 5.4:+48847588 | None:intergenic |
| CGAGTTGGTGGTAGCGAGTT+AGG | 0.322220 | 5.4:+48851876 | None:intergenic |
| TCTTTAGAGCATACTTGGTT+TGG | 0.324036 | 5.4:+48848012 | None:intergenic |
| GGAGGTGGAAAGGGCGAAGT+TGG | 0.334594 | 5.4:-48846140 | MS.gene89508:CDS |
| TTCGATGATTTATTGGCATT+AGG | 0.340003 | 5.4:+48847883 | None:intergenic |
| CTTGTCCTCTTCCCCATCTT+GGG | 0.341529 | 5.4:+48851104 | None:intergenic |
| TTAAATTGTATGTAGGTGAT+TGG | 0.341926 | 5.4:-48851208 | MS.gene89508:intron |
| TACAAGCTTGTTTCAGAGTT+AGG | 0.344321 | 5.4:-48846326 | MS.gene89508:CDS |
| CTGCCTATGATTTGGATCAT+TGG | 0.352319 | 5.4:-48850946 | MS.gene89508:CDS |
| TATCGTTCTGGATGTCTTGA+TGG | 0.362209 | 5.4:-48847775 | MS.gene89508:CDS |
| TCCCTAAATATATTTATGTT+TGG | 0.363155 | 5.4:+48851127 | None:intergenic |
| TGTACTATGCAACTATGAAA+TGG | 0.363228 | 5.4:+48850104 | None:intergenic |
| TTTGGATCATTGGAAGGGTT+TGG | 0.364911 | 5.4:-48850936 | MS.gene89508:CDS |
| TTTGACGGAAATGAAATTGT+AGG | 0.365409 | 5.4:+48846415 | None:intergenic |
| GTACTATGCAACTATGAAAT+GGG | 0.369757 | 5.4:+48850105 | None:intergenic |
| ACATTGGGAATTACAAATAC+TGG | 0.371416 | 5.4:-48846269 | MS.gene89508:CDS |
| TGGTGGAAGGGCTCTTGCTC+AGG | 0.371596 | 5.4:-48847467 | MS.gene89508:CDS |
| AGCCAAACACATTATCGTTC+TGG | 0.371977 | 5.4:-48847787 | MS.gene89508:CDS |
| GCTCTTGCTCAGGTTGTGTT+TGG | 0.377174 | 5.4:-48847457 | MS.gene89508:CDS |
| TTGGACCAATTGTGCCATAT+TGG | 0.378543 | 5.4:+48848031 | None:intergenic |
| CAAAATTGGAGGGATTATTT+GGG | 0.380232 | 5.4:-48847509 | MS.gene89508:CDS |
| CACAAAATTACCAAAATAAC+CGG | 0.381669 | 5.4:+48847571 | None:intergenic |
| AGATTGAATGGCAGTGTTGC+AGG | 0.383130 | 5.4:-48851599 | MS.gene89508:CDS |
| CTTCAAGGAGATTCCTTTGA+AGG | 0.385860 | 5.4:-48851022 | MS.gene89508:CDS |
| ATTATTTGGGCTGGTTATCC+TGG | 0.393707 | 5.4:-48847496 | MS.gene89508:CDS |
| GTTGAGATTGCAGAAGAGTA+AGG | 0.394117 | 5.4:+48851787 | None:intergenic |
| ACCAAACATAAATATATTTA+GGG | 0.398770 | 5.4:-48851128 | MS.gene89508:CDS |
| AGGAATAATTTGAGTAGCTT+AGG | 0.401616 | 5.4:+48846435 | None:intergenic |
| CAAACCTAGTCTTATTCTAA+TGG | 0.402033 | 5.4:+48848077 | None:intergenic |
| TTGGTGGTGTCACAGGAGTA+TGG | 0.402961 | 5.4:+48851824 | None:intergenic |
| AACCCCACCAATTGTTTCAC+TGG | 0.404723 | 5.4:+48846182 | None:intergenic |
| ATAAGACTAGGTTTGTTTGA+TGG | 0.411429 | 5.4:-48848069 | MS.gene89508:CDS |
| AATTGTGCCATATTGGAGTT+TGG | 0.412583 | 5.4:+48848038 | None:intergenic |
| GCTGGTTATCCTGGTGAACT+TGG | 0.414067 | 5.4:-48847487 | MS.gene89508:CDS |
| ACTCCAAGGGTATTTACTCT+TGG | 0.414446 | 5.4:+48847913 | None:intergenic |
| AATCCAACCAAACTCCAATA+TGG | 0.420174 | 5.4:-48848045 | MS.gene89508:CDS |
| AGGTGGTTATTTGTTGGTTG+TGG | 0.420306 | 5.4:-48846051 | MS.gene89508:CDS |
| AAACTCCAATATGGCACAAT+TGG | 0.421759 | 5.4:-48848036 | MS.gene89508:CDS |
| GTGTTTGGTGACTATAACCC+AGG | 0.425278 | 5.4:-48847442 | MS.gene89508:intron |
| TAAGACTAGGTTTGTTTGAT+GGG | 0.430129 | 5.4:-48848068 | MS.gene89508:CDS |
| ATCCAGAACGATAATGTGTT+TGG | 0.439275 | 5.4:+48847785 | None:intergenic |
| AAGCCAAAGAAAGGTAGAAA+TGG | 0.439382 | 5.4:-48846209 | MS.gene89508:CDS |
| TCCTATGTGAGAGGACTTCA+AGG | 0.440841 | 5.4:-48851037 | MS.gene89508:CDS |
| ACAAATACTGGAAGCATGGC+TGG | 0.442763 | 5.4:-48846257 | MS.gene89508:CDS |
| CTCATTCTCATGTCTGTCAT+TGG | 0.443342 | 5.4:+48846536 | None:intergenic |
| TGGCTCTTTGAGAGATGGTA+AGG | 0.444214 | 5.4:+48851765 | None:intergenic |
| TTTGAGAGTGTGACGGTGGA+AGG | 0.451870 | 5.4:-48846161 | MS.gene89508:CDS |
| TGAAGAAGGTGGTTATTTGT+TGG | 0.451987 | 5.4:-48846057 | MS.gene89508:CDS |
| ATGTCAATTTCTGTCACATT+GGG | 0.454625 | 5.4:-48846284 | MS.gene89508:CDS |
| ATAAGTTCTTGCTGCTTACC+AGG | 0.458334 | 5.4:+48847622 | None:intergenic |
| CTTCCAATGATCCAAATCAT+AGG | 0.458620 | 5.4:+48850943 | None:intergenic |
| AATTAGTTTCCCACCTTCAA+AGG | 0.461085 | 5.4:+48851009 | None:intergenic |
| AGTTACTGACCTTACTGATT+CGG | 0.462510 | 5.4:+48851516 | None:intergenic |
| AAAGTTTATGAATTTGGCTA+TGG | 0.465270 | 5.4:-48846458 | MS.gene89508:CDS |
| ACGGTGGAAGGAGGTGGAAA+GGG | 0.465934 | 5.4:-48846149 | MS.gene89508:CDS |
| TTAGCAAAAGTAATATCAAC+AGG | 0.467973 | 5.4:+48847541 | None:intergenic |
| TTATTTGTTGGTTGTGGGAG+AGG | 0.471909 | 5.4:-48846045 | MS.gene89508:CDS |
| CATGTCAATTTCTGTCACAT+TGG | 0.476854 | 5.4:-48846285 | MS.gene89508:CDS |
| GCACGGTCGATTTGAGATAT+CGG | 0.478301 | 5.4:+48848117 | None:intergenic |
| GAGCCGTGACACAATGTCTT+TGG | 0.481669 | 5.4:+48851745 | None:intergenic |
| TGGAAATCCAGTGAAACAAT+TGG | 0.484795 | 5.4:-48846189 | MS.gene89508:CDS |
| TATATTTAGGGACCCAAGAT+GGG | 0.488625 | 5.4:-48851116 | MS.gene89508:CDS |
| GACAGCTGGAGAAGATCCTT+TGG | 0.489521 | 5.4:-48851080 | MS.gene89508:CDS |
| GTCTTTGGCTCTTTGAGAGA+TGG | 0.490844 | 5.4:+48851760 | None:intergenic |
| GGTGGTTATTTGTTGGTTGT+GGG | 0.491601 | 5.4:-48846050 | MS.gene89508:CDS |
| CTATGATTTGGATCATTGGA+AGG | 0.493202 | 5.4:-48850942 | MS.gene89508:CDS |
| AGGGTATTTACTCTTGGAAG+TGG | 0.494590 | 5.4:+48847919 | None:intergenic |
| CAAGGAGATTCCTTTGAAGG+TGG | 0.495290 | 5.4:-48851019 | MS.gene89508:CDS |
| ACTCTGAAACAAGCTTGTAA+TGG | 0.495354 | 5.4:+48846330 | None:intergenic |
| GGTTATCCTGGTGAACTTGG+TGG | 0.497246 | 5.4:-48847484 | MS.gene89508:CDS |
| GGTGTTGCTAATGCTGGTAA+AGG | 0.497484 | 5.4:-48851626 | MS.gene89508:CDS |
| GTGTTGCTAATGCTGGTAAA+GGG | 0.502533 | 5.4:-48851625 | MS.gene89508:CDS |
| GGTTACTTTGCAAGATTTGG+CGG | 0.503836 | 5.4:-48850141 | MS.gene89508:CDS |
| GTATCGAATGAGTGGTTGAT+TGG | 0.504227 | 5.4:+48846372 | None:intergenic |
| CTGTTTGTGAAGCCAAAGAA+AGG | 0.504938 | 5.4:-48846218 | MS.gene89508:CDS |
| ATCCTGGTGAACTTGGTGGA+AGG | 0.508629 | 5.4:-48847480 | MS.gene89508:CDS |
| AAGAATAATGACAAAATTGG+AGG | 0.510297 | 5.4:-48847520 | MS.gene89508:CDS |
| ATGAGAGCTGATCCATCATC+AGG | 0.511303 | 5.4:-48846518 | MS.gene89508:CDS |
| GTAGAAACGGTAGGTTCTAC+CGG | 0.511605 | 5.4:+48846490 | None:intergenic |
| CGGTATACCGAGTCGAGGAA+TGG | 0.513844 | 5.4:+48851679 | None:intergenic |
| GACGGTGGAAGGAGGTGGAA+AGG | 0.517159 | 5.4:-48846150 | MS.gene89508:CDS |
| CTACCGGGATAGCCTGATGA+TGG | 0.517596 | 5.4:+48846506 | None:intergenic |
| AGAGATGATTTAGAGTTGCC+TGG | 0.517802 | 5.4:-48847640 | MS.gene89508:CDS |
| CTTTGGCATCAAAATCAAAA+CGG | 0.518275 | 5.4:+48850912 | None:intergenic |
| TGGTTGATTGGTTGATGTGA+AGG | 0.520554 | 5.4:+48846384 | None:intergenic |
| ACATCAGCTACAGCATCCTC+TGG | 0.521946 | 5.4:+48849447 | None:intergenic |
| TGCCAAAGCTTCTAAGAAGC+CGG | 0.524198 | 5.4:-48847590 | MS.gene89508:CDS |
| CAGCTTCAAGAGCAACGTCT+AGG | 0.524868 | 5.4:+48847986 | None:intergenic |
| AAGTGGGTTGGTGGTGTCAC+AGG | 0.526196 | 5.4:+48851817 | None:intergenic |
| ATATATTTAGGGACCCAAGA+TGG | 0.528065 | 5.4:-48851117 | MS.gene89508:CDS |
| TGTGCTTACAACCGTGTCAA+TGG | 0.530376 | 5.4:-48850059 | MS.gene89508:CDS |
| ATACCGAGTCGAGGAATGGC+AGG | 0.534851 | 5.4:+48851683 | None:intergenic |
| TCCTGGTGAACTTGGTGGAA+GGG | 0.537602 | 5.4:-48847479 | MS.gene89508:CDS |
| TCTTGGAAGTGGGAGAATTG+AGG | 0.537861 | 5.4:+48847930 | None:intergenic |
| CAGCAGTAAGAATAACTTGA+GGG | 0.540873 | 5.4:+48851564 | None:intergenic |
| GGTAAAGGGATAAGATTGAA+TGG | 0.541496 | 5.4:-48851611 | MS.gene89508:CDS |
| GATCCATCATCAGGCTATCC+CGG | 0.542828 | 5.4:-48846509 | MS.gene89508:CDS |
| GGCTTCACAAACAGCAACAC+AGG | 0.545539 | 5.4:+48846227 | None:intergenic |
| AGAATCATATATGATAATCA+AGG | 0.545803 | 5.4:-48849483 | MS.gene89508:CDS |
| GTGCCATATTGGAGTTTGGT+TGG | 0.546323 | 5.4:+48848042 | None:intergenic |
| GGTGTCAAGGTGGTTGAAGA+AGG | 0.548262 | 5.4:-48846071 | MS.gene89508:CDS |
| ATTGGAGGGATTATTTGGGC+TGG | 0.549271 | 5.4:-48847505 | MS.gene89508:CDS |
| CTTCCAAGAGTAAATACCCT+TGG | 0.550798 | 5.4:-48847916 | MS.gene89508:CDS |
| TACAATGCTGGACAAGCTCA+AGG | 0.550917 | 5.4:-48851166 | MS.gene89508:CDS |
| CAATGTGACAGAAATTGACA+TGG | 0.551118 | 5.4:+48846286 | None:intergenic |
| AAGGAGATTCCTTTGAAGGT+GGG | 0.551664 | 5.4:-48851018 | MS.gene89508:CDS |
| GGAAGAGGACAAGAGACAGC+TGG | 0.554566 | 5.4:-48851094 | MS.gene89508:CDS |
| GCCCTTCCACCAAGTTCACC+AGG | 0.555057 | 5.4:+48847478 | None:intergenic |
| AATGGTGAATAGATTGTGTA+GGG | 0.557476 | 5.4:+48848095 | None:intergenic |
| TTTCATAGTTGCATAGTACA+AGG | 0.561138 | 5.4:-48850101 | MS.gene89508:CDS |
| GCAAGAGGAGTATACAATGC+TGG | 0.561312 | 5.4:-48851178 | MS.gene89508:CDS |
| AATATTGGTACTAATCTACA+AGG | 0.562148 | 5.4:+48847832 | None:intergenic |
| AGGGACCCAAGATGGGGAAG+AGG | 0.563005 | 5.4:-48851109 | MS.gene89508:CDS |
| AATCCAGTGAAACAATTGGT+GGG | 0.563340 | 5.4:-48846185 | MS.gene89508:CDS |
| TCGGTATACCGAGTTATCAA+TGG | 0.563582 | 5.4:-48851667 | MS.gene89508:CDS |
| GCTCTTGAAGCTGCAAGAAG+TGG | 0.571675 | 5.4:-48847976 | MS.gene89508:CDS |
| ATCCAGTGAAACAATTGGTG+GGG | 0.572580 | 5.4:-48846184 | MS.gene89508:CDS |
| TCATCCCACCATTGATAACT+CGG | 0.573649 | 5.4:+48851659 | None:intergenic |
| GAGAGTGTGACGGTGGAAGG+AGG | 0.575492 | 5.4:-48846158 | MS.gene89508:CDS |
| TAATGGTGAATAGATTGTGT+AGG | 0.575658 | 5.4:+48848094 | None:intergenic |
| TGGACCTGTGTAGAAACGGT+AGG | 0.576368 | 5.4:+48846481 | None:intergenic |
| AGTGTGACGGTGGAAGGAGG+TGG | 0.578214 | 5.4:-48846155 | MS.gene89508:CDS |
| AGCAAATGAGAGTGGTGTCA+AGG | 0.581128 | 5.4:-48846084 | MS.gene89508:CDS |
| CATTGTGTCACGGCTCACAT+TGG | 0.582035 | 5.4:-48851738 | MS.gene89508:CDS |
| AATTACAAATACTGGAAGCA+TGG | 0.582605 | 5.4:-48846261 | MS.gene89508:CDS |
| ACTTTGGTACCGAATCAGTA+AGG | 0.582767 | 5.4:-48851525 | MS.gene89508:intron |
| GGGGTTTGAGAGTGTGACGG+TGG | 0.585244 | 5.4:-48846165 | MS.gene89508:CDS |
| AGGTACATGAGTTTGTGAAT+CGG | 0.586824 | 5.4:+48851847 | None:intergenic |
| TTGCACGGTGTTGCTAATGC+TGG | 0.589612 | 5.4:-48851632 | MS.gene89508:CDS |
| TATGATTTGGATCATTGGAA+GGG | 0.590213 | 5.4:-48850941 | MS.gene89508:CDS |
| GGTGGGGTTTGAGAGTGTGA+CGG | 0.592126 | 5.4:-48846168 | MS.gene89508:CDS |
| GTAGCTGATGTACTTCAAGC+TGG | 0.594292 | 5.4:-48849435 | MS.gene89508:intron |
| CATTAGGGCCTATAACTCCA+AGG | 0.594911 | 5.4:+48847899 | None:intergenic |
| TACTATGCAACTATGAAATG+GGG | 0.595239 | 5.4:+48850106 | None:intergenic |
| AAATCCAGTGAAACAATTGG+TGG | 0.605193 | 5.4:-48846186 | MS.gene89508:CDS |
| GGGTATTTACTCTTGGAAGT+GGG | 0.605290 | 5.4:+48847920 | None:intergenic |
| AGAATAATGACAAAATTGGA+GGG | 0.611667 | 5.4:-48847519 | MS.gene89508:CDS |
| AGAACCTACCGTTTCTACAC+AGG | 0.612051 | 5.4:-48846485 | MS.gene89508:CDS |
| GTCAAGGTGGTTGAAGAAGG+TGG | 0.614362 | 5.4:-48846068 | MS.gene89508:CDS |
| GTGAATCGGCATGAACGAGT+TGG | 0.622493 | 5.4:+48851861 | None:intergenic |
| GTATACCGAGTTATCAATGG+TGG | 0.623082 | 5.4:-48851664 | MS.gene89508:CDS |
| TAATGCCAATAAATCATCGA+AGG | 0.625014 | 5.4:-48847881 | MS.gene89508:CDS |
| GCTCCTGCCATTCCTCGACT+CGG | 0.625159 | 5.4:-48851686 | MS.gene89508:CDS |
| GCAGCAGTAAGAATAACTTG+AGG | 0.626019 | 5.4:+48851563 | None:intergenic |
| TGAATAGATTGTGTAGGGCA+CGG | 0.634890 | 5.4:+48848100 | None:intergenic |
| TATGCTGTTTCCTATGTGAG+AGG | 0.634909 | 5.4:-48851046 | MS.gene89508:CDS |
| ATTGGATCAAAGTCAAGAGA+GGG | 0.636383 | 5.4:-48847674 | MS.gene89508:CDS |
| AATTTGGAACTCCATTGACA+CGG | 0.638503 | 5.4:+48850048 | None:intergenic |
| ATAGTACAAGGACGGTCTAG+TGG | 0.639813 | 5.4:-48850089 | MS.gene89508:CDS |
| TAAAATCAGGTATATTACGT+CGG | 0.641041 | 5.4:-48849520 | MS.gene89508:intron |
| GTGATTGGAACTGAGGCAAG+AGG | 0.644411 | 5.4:-48851193 | MS.gene89508:CDS |
| AATCGGCATGAACGAGTTGG+TGG | 0.645435 | 5.4:+48851864 | None:intergenic |
| ATAGTTGCATAGTACAAGGA+CGG | 0.645766 | 5.4:-48850097 | MS.gene89508:CDS |
| TAGAAACGGTAGGTTCTACC+GGG | 0.648311 | 5.4:+48846491 | None:intergenic |
| CTTAGTAGAGCAAATGAGAG+TGG | 0.648348 | 5.4:-48846092 | MS.gene89508:CDS |
| TTCACCATTAGAATAAGACT+AGG | 0.657936 | 5.4:-48848081 | MS.gene89508:CDS |
| GATTGGATCAAAGTCAAGAG+AGG | 0.658616 | 5.4:-48847675 | MS.gene89508:CDS |
| ATTAGGGCCTATAACTCCAA+GGG | 0.662705 | 5.4:+48847900 | None:intergenic |
| ACAATGCTGGACAAGCTCAA+GGG | 0.664494 | 5.4:-48851165 | MS.gene89508:CDS |
| GAGCCAAAGACATTGTGTCA+CGG | 0.665561 | 5.4:-48851748 | MS.gene89508:CDS |
| TTGGTACTAATCTACAAGGA+CGG | 0.668059 | 5.4:+48847836 | None:intergenic |
| TTACTTGACAAAGCATGCAA+AGG | 0.671287 | 5.4:-48848163 | MS.gene89508:CDS |
| TATACCGAGTTATCAATGGT+GGG | 0.671346 | 5.4:-48851663 | MS.gene89508:CDS |
| TGGTGGGATGAAGCGTTGCA+CGG | 0.676038 | 5.4:-48851647 | MS.gene89508:CDS |
| TATGTAGGTGATTGGAACTG+AGG | 0.676313 | 5.4:-48851200 | MS.gene89508:intron |
| ATATTTAGGGACCCAAGATG+GGG | 0.681751 | 5.4:-48851115 | MS.gene89508:CDS |
| TCCTTGAAGTCCTCTCACAT+AGG | 0.685463 | 5.4:+48851036 | None:intergenic |
| TCAGGGATGGATGTAGAGTG+TGG | 0.708529 | 5.4:-48848189 | MS.gene89508:intron |
| TAACTCGGTATACCGAGTCG+AGG | 0.711678 | 5.4:+48851674 | None:intergenic |
| GTGGTGTCACAGGAGTATGG+AGG | 0.712071 | 5.4:+48851827 | None:intergenic |
| AAATGAGAGTGGTGTCAAGG+TGG | 0.736902 | 5.4:-48846081 | MS.gene89508:CDS |
| ACTATGCAACTATGAAATGG+GGG | 0.744455 | 5.4:+48850107 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTATTTATTTTATAT+TGG | - | chr5.4:48850858-48850877 | MS.gene89508:intron | 0.0% |
| !!! | ATTTTTATTTATTTTATATT+GGG | - | chr5.4:48850859-48850878 | MS.gene89508:intron | 0.0% |
| !! | ACAAAATTGAAATAATTATA+AGG | + | chr5.4:48848002-48848021 | None:intergenic | 10.0% |
| !! | ATATTGTTTAATTCTTATAA+GGG | + | chr5.4:48848154-48848173 | None:intergenic | 10.0% |
| !! | CAAAATTGAAATAATTATAA+GGG | + | chr5.4:48848001-48848020 | None:intergenic | 10.0% |
| !! | TATATTGTTTAATTCTTATA+AGG | + | chr5.4:48848155-48848174 | None:intergenic | 10.0% |
| !!! | AAAATGTAAATTTTATAAGA+AGG | - | chr5.4:48848125-48848144 | MS.gene89508:CDS | 10.0% |
| !! | AACTAAAATACAAAATGATA+AGG | + | chr5.4:48849325-48849344 | None:intergenic | 15.0% |
| !! | AATATTTAGTTAAGCAAAAA+GGG | - | chr5.4:48850827-48850846 | MS.gene89508:intron | 15.0% |
| !! | AATGTGATTTATTAATCAAA+TGG | - | chr5.4:48847178-48847197 | MS.gene89508:intron | 15.0% |
| !! | ACCAAACATAAATATATTTA+GGG | - | chr5.4:48846805-48846824 | MS.gene89508:intron | 15.0% |
| !! | ATCTTAATTAAATTGTATGT+AGG | - | chr5.4:48846718-48846737 | MS.gene89508:intron | 15.0% |
| !! | CACATAATATGTTAAAAAAA+TGG | - | chr5.4:48850553-48850572 | MS.gene89508:intron | 15.0% |
| !! | GAAATTAAAAAATGACAAAT+AGG | - | chr5.4:48847461-48847480 | MS.gene89508:CDS | 15.0% |
| !! | TAAAAGAGATCTTAAAAAAA+GGG | - | chr5.4:48849195-48849214 | MS.gene89508:intron | 15.0% |
| !! | TAATATTTAGTTAAGCAAAA+AGG | - | chr5.4:48850826-48850845 | MS.gene89508:intron | 15.0% |
| !! | TATTGTTTAATTCTTATAAG+GGG | + | chr5.4:48848153-48848172 | None:intergenic | 15.0% |
| !! | TTAAAAGAGATCTTAAAAAA+AGG | - | chr5.4:48849194-48849213 | MS.gene89508:intron | 15.0% |
| !!! | AATAAGTGATTATGTAATTT+TGG | - | chr5.4:48850229-48850248 | MS.gene89508:intron | 15.0% |
| !!! | GATTAATAAGAATGATTTTT+TGG | - | chr5.4:48848387-48848406 | MS.gene89508:intron | 15.0% |
| !!! | GTATTTTAATGAAATCTTTT+GGG | + | chr5.4:48851378-48851397 | None:intergenic | 15.0% |
| !!! | TAGTTTAAAGATTTAGTTTT+TGG | - | chr5.4:48846512-48846531 | MS.gene89508:CDS | 15.0% |
| !!! | TATTAAATCAACTATTCTTT+TGG | + | chr5.4:48847439-48847458 | None:intergenic | 15.0% |
| !! | AATTCAAAATGTGAAACAAA+AGG | + | chr5.4:48847591-48847610 | None:intergenic | 20.0% |
| !! | AGAATCATATATGATAATCA+AGG | - | chr5.4:48848450-48848469 | MS.gene89508:intron | 20.0% |
| !! | AGATTAGTACCAATATTAAA+AGG | - | chr5.4:48850107-48850126 | MS.gene89508:CDS | 20.0% |
| !! | ATATACTTGAAAGAGTTATT+TGG | + | chr5.4:48851268-48851287 | None:intergenic | 20.0% |
| !! | CACCAAACATAAATATATTT+AGG | - | chr5.4:48846804-48846823 | MS.gene89508:intron | 20.0% |
| !! | TAATATAACTAGATCTACAT+TGG | - | chr5.4:48849152-48849171 | MS.gene89508:intron | 20.0% |
| !! | TATACTTGAAAGAGTTATTT+GGG | + | chr5.4:48851267-48851286 | None:intergenic | 20.0% |
| !! | TCCCTAAATATATTTATGTT+TGG | + | chr5.4:48846809-48846828 | None:intergenic | 20.0% |
| !! | TCTAATAAGCACAAATAAAA+TGG | + | chr5.4:48847233-48847252 | None:intergenic | 20.0% |
| !! | TGAAAAACATTGTTTCATAA+AGG | + | chr5.4:48848191-48848210 | None:intergenic | 20.0% |
| !! | TTTAGAAATAATGCATGTTT+AGG | - | chr5.4:48849604-48849623 | MS.gene89508:intron | 20.0% |
| !! | TTTGACCTAAATTAAAACTA+AGG | + | chr5.4:48849519-48849538 | None:intergenic | 20.0% |
| !!! | AGAAAATAGTCTTCATTTTA+TGG | + | chr5.4:48851095-48851114 | None:intergenic | 20.0% |
| !!! | ATAAGCAATGTTTTAAATTG+TGG | + | chr5.4:48851199-48851218 | None:intergenic | 20.0% |
| !!! | ATTTGCCTTAGTTTTAATTT+AGG | - | chr5.4:48849511-48849530 | MS.gene89508:CDS | 20.0% |
| !!! | GATTATGTAATTTTGGTTAT+GGG | - | chr5.4:48850236-48850255 | MS.gene89508:intron | 20.0% |
| !!! | GGTATTTTAATGAAATCTTT+TGG | + | chr5.4:48851379-48851398 | None:intergenic | 20.0% |
| !!! | GTGTAAAATCCTTTTAATAT+TGG | + | chr5.4:48850119-48850138 | None:intergenic | 20.0% |
| !!! | GTTTTATATGTTTACCTTTT+AGG | - | chr5.4:48849071-48849090 | MS.gene89508:intron | 20.0% |
| !!! | TCTACTTGAAAGAAATTTTT+AGG | + | chr5.4:48848916-48848935 | None:intergenic | 20.0% |
| !!! | TGATTATGTAATTTTGGTTA+TGG | - | chr5.4:48850235-48850254 | MS.gene89508:intron | 20.0% |
| ! | AAAAATGTAGCTTCAAAAAG+AGG | + | chr5.4:48848290-48848309 | None:intergenic | 25.0% |
| ! | AAACTAAACAAACAAGAACT+TGG | + | chr5.4:48847542-48847561 | None:intergenic | 25.0% |
| ! | AAAGTTTATGAATTTGGCTA+TGG | - | chr5.4:48851475-48851494 | MS.gene89508:intron | 25.0% |
| ! | AAATTGTAATCTGCACAATT+TGG | + | chr5.4:48847904-48847923 | None:intergenic | 25.0% |
| ! | AACTCTTATTACTCAACTAA+TGG | - | chr5.4:48851296-48851315 | MS.gene89508:intron | 25.0% |
| ! | AACTTATTCTCTATCCTAAA+AGG | + | chr5.4:48849088-48849107 | None:intergenic | 25.0% |
| ! | AAGAATAATGACAAAATTGG+AGG | - | chr5.4:48850413-48850432 | MS.gene89508:intron | 25.0% |
| ! | AATATTGGTACTAATCTACA+AGG | + | chr5.4:48850104-48850123 | None:intergenic | 25.0% |
| ! | ACGGATTTGGATTATTTAAA+TGG | + | chr5.4:48847760-48847779 | None:intergenic | 25.0% |
| ! | ACTCTTATTACTCAACTAAT+GGG | - | chr5.4:48851297-48851316 | MS.gene89508:intron | 25.0% |
| ! | AGAATAATGACAAAATTGGA+GGG | - | chr5.4:48850414-48850433 | MS.gene89508:intron | 25.0% |
| ! | AGACAAAAATGGAATTTCAA+TGG | - | chr5.4:48847940-48847959 | MS.gene89508:CDS | 25.0% |
| ! | AGAGAAAAGAAAACTTACTT+TGG | + | chr5.4:48847041-48847060 | None:intergenic | 25.0% |
| ! | AGTAACCTGAATTATTAGAA+CGG | + | chr5.4:48847779-48847798 | None:intergenic | 25.0% |
| ! | ATATAGCTATTACGTGTTTA+CGG | - | chr5.4:48848565-48848584 | MS.gene89508:intron | 25.0% |
| ! | ATATTACTAGCAAAATCACA+TGG | - | chr5.4:48848745-48848764 | MS.gene89508:intron | 25.0% |
| ! | ATCACGAGAATTAAAAAAGT+TGG | - | chr5.4:48849017-48849036 | MS.gene89508:intron | 25.0% |
| ! | ATGTATAAACTTCGTAGATT+TGG | - | chr5.4:48850779-48850798 | MS.gene89508:intron | 25.0% |
| ! | CAATTATCTTTAGTCATGTT+AGG | - | chr5.4:48847405-48847424 | MS.gene89508:intron | 25.0% |
| ! | CACAAAATTACCAAAATAAC+CGG | + | chr5.4:48850365-48850384 | None:intergenic | 25.0% |
| ! | CACAAGTACTATTATAATCA+AGG | - | chr5.4:48849693-48849712 | MS.gene89508:intron | 25.0% |
| ! | CTCTCAAAAAAATAAGTATG+AGG | + | chr5.4:48848959-48848978 | None:intergenic | 25.0% |
| ! | GAAAATAGTCTTTATGTTCA+TGG | - | chr5.4:48851037-48851056 | MS.gene89508:CDS | 25.0% |
| ! | GACAAAAATGGAATTTCAAT+GGG | - | chr5.4:48847941-48847960 | MS.gene89508:CDS | 25.0% |
| ! | GACAATGTGACATTTAATTA+TGG | - | chr5.4:48848645-48848664 | MS.gene89508:intron | 25.0% |
| ! | GATTTATCTTACTTATTCAC+CGG | + | chr5.4:48847090-48847109 | None:intergenic | 25.0% |
| ! | GCTAAGAATAATGACAAAAT+TGG | - | chr5.4:48850410-48850429 | MS.gene89508:intron | 25.0% |
| ! | GCTCTTACAAATTACAAAAT+TGG | - | chr5.4:48848049-48848068 | MS.gene89508:CDS | 25.0% |
| ! | TAAAATCAGGTATATTACGT+CGG | - | chr5.4:48848413-48848432 | MS.gene89508:intron | 25.0% |
| ! | TAATAGTACTTGTGTATGTT+TGG | + | chr5.4:48849687-48849706 | None:intergenic | 25.0% |
| ! | TGGATCAATCTTAATTATCT+TGG | + | chr5.4:48849403-48849422 | None:intergenic | 25.0% |
| ! | TGGTTATCTTACTTTATCAA+TGG | - | chr5.4:48848665-48848684 | MS.gene89508:intron | 25.0% |
| ! | TGTTTACTAAATGATTGCAT+GGG | + | chr5.4:48850920-48850939 | None:intergenic | 25.0% |
| ! | TTAAATTGTATGTAGGTGAT+TGG | - | chr5.4:48846725-48846744 | MS.gene89508:intron | 25.0% |
| ! | TTAGCAAAAGTAATATCAAC+AGG | + | chr5.4:48850395-48850414 | None:intergenic | 25.0% |
| !! | AAAAGTTCACTATCACATTT+TGG | + | chr5.4:48848353-48848372 | None:intergenic | 25.0% |
| !! | AAGACTATTTTCTTTGAATC+TGG | + | chr5.4:48851029-48851048 | None:intergenic | 25.0% |
| !! | AATGTTTTTCACTCTATTGA+AGG | - | chr5.4:48848200-48848219 | MS.gene89508:intron | 25.0% |
| !! | ACTTTTCTCACTTTGTATTT+TGG | - | chr5.4:48848702-48848721 | MS.gene89508:intron | 25.0% |
| !! | AGTTGAGTAATAAGAGTTTT+AGG | + | chr5.4:48851294-48851313 | None:intergenic | 25.0% |
| !! | ATTGTGTAATCAAACTTTTC+AGG | - | chr5.4:48849726-48849745 | MS.gene89508:intron | 25.0% |
| !! | CGAAGTTTATACATGTTTTA+AGG | + | chr5.4:48850773-48850792 | None:intergenic | 25.0% |
| !! | TAGCCAAATTCATAAACTTT+TGG | + | chr5.4:48851475-48851494 | None:intergenic | 25.0% |
| !! | TATTTTATATTGGGAGACAA+GGG | - | chr5.4:48850868-48850887 | MS.gene89508:intron | 25.0% |
| !! | TTGTGTAATCAAACTTTTCA+GGG | - | chr5.4:48849727-48849746 | MS.gene89508:intron | 25.0% |
| !!! | AGTATGCTATTTAATTTGCT+TGG | + | chr5.4:48848814-48848833 | None:intergenic | 25.0% |
| !!! | CATTTTAGTTGTTTAAGTTC+TGG | - | chr5.4:48849279-48849298 | MS.gene89508:intron | 25.0% |
| !!! | CTCATACTTATTTTTTTGAG+AGG | - | chr5.4:48848957-48848976 | MS.gene89508:intron | 25.0% |
| !!! | CTTGTTTTAATGTCTATCAT+TGG | - | chr5.4:48848878-48848897 | MS.gene89508:intron | 25.0% |
| !!! | GATTTTTTGGTGTTAAAATC+AGG | - | chr5.4:48848400-48848419 | MS.gene89508:intron | 25.0% |
| !!! | GCATATTTTGAATTTACCAA+AGG | + | chr5.4:48846872-48846891 | None:intergenic | 25.0% |
| !!! | GTCTTAATTTTTTCACATTG+TGG | - | chr5.4:48849453-48849472 | MS.gene89508:CDS | 25.0% |
| !!! | GTTATTTTGGTAATTTTGTG+CGG | - | chr5.4:48850365-48850384 | MS.gene89508:intron | 25.0% |
| !!! | TATACATGTTTTAAGGATCT+TGG | + | chr5.4:48850766-48850785 | None:intergenic | 25.0% |
| !!! | TATGTGTTTTTATCTGTCAA+TGG | + | chr5.4:48850539-48850558 | None:intergenic | 25.0% |
| !!! | TTATTTTATATTGGGAGACA+AGG | - | chr5.4:48850867-48850886 | MS.gene89508:intron | 25.0% |
| AAAAATGAAAGCAATGGTGA+TGG | + | chr5.4:48846032-48846051 | None:intergenic | 30.0% | |
| AACAACCTTCGATGATTTAT+TGG | + | chr5.4:48850060-48850079 | None:intergenic | 30.0% | |
| AATGGTGAATAGATTGTGTA+GGG | + | chr5.4:48849841-48849860 | None:intergenic | 30.0% | |
| AATTACAAATACTGGAAGCA+TGG | - | chr5.4:48851672-48851691 | MS.gene89508:CDS | 30.0% | |
| ACAAAATTGGAGGGATTATT+TGG | - | chr5.4:48850423-48850442 | MS.gene89508:intron | 30.0% | |
| ACATTGGGAATTACAAATAC+TGG | - | chr5.4:48851664-48851683 | MS.gene89508:CDS | 30.0% | |
| ACCATAAAAATTAGAGTGCA+TGG | + | chr5.4:48849423-48849442 | None:intergenic | 30.0% | |
| ACGAAACTAAAAGACAAATC+AGG | + | chr5.4:48847267-48847286 | None:intergenic | 30.0% | |
| AGAGTCTAAAAATTCAGCTT+CGG | - | chr5.4:48850893-48850912 | MS.gene89508:intron | 30.0% | |
| AGGAATAATTTGAGTAGCTT+AGG | + | chr5.4:48851501-48851520 | None:intergenic | 30.0% | |
| ATGTCAATTTCTGTCACATT+GGG | - | chr5.4:48851649-48851668 | MS.gene89508:CDS | 30.0% | |
| CAAAATTGGAGGGATTATTT+GGG | - | chr5.4:48850424-48850443 | MS.gene89508:intron | 30.0% | |
| CAAATCCGTTCTAATAATTC+AGG | - | chr5.4:48847771-48847790 | MS.gene89508:CDS | 30.0% | |
| CACAACTAAATCTCAATTAC+TGG | - | chr5.4:48850938-48850957 | MS.gene89508:CDS | 30.0% | |
| CTTTGGCATCAAAATCAAAA+CGG | + | chr5.4:48847024-48847043 | None:intergenic | 30.0% | |
| GAAGAGAAAAATGAAAGCAA+TGG | + | chr5.4:48846038-48846057 | None:intergenic | 30.0% | |
| GGTCCAAAAGTTTATGAATT+TGG | - | chr5.4:48851469-48851488 | MS.gene89508:intron | 30.0% | |
| GTACTATGCAACTATGAAAT+GGG | + | chr5.4:48847831-48847850 | None:intergenic | 30.0% | |
| GTGTTTACTAAATGATTGCA+TGG | + | chr5.4:48850921-48850940 | None:intergenic | 30.0% | |
| TAAATCTCAATTACTGGATG+CGG | - | chr5.4:48850944-48850963 | MS.gene89508:CDS | 30.0% | |
| TAAGAGATTATAGAGCTTAG+AGG | + | chr5.4:48849550-48849569 | None:intergenic | 30.0% | |
| TAATGCCAATAAATCATCGA+AGG | - | chr5.4:48850052-48850071 | MS.gene89508:CDS | 30.0% | |
| TAATGGTGAATAGATTGTGT+AGG | + | chr5.4:48849842-48849861 | None:intergenic | 30.0% | |
| TACTATGCAACTATGAAATG+GGG | + | chr5.4:48847830-48847849 | None:intergenic | 30.0% | |
| TATTTAATGACTGCAATGCA+GGG | - | chr5.4:48851329-48851348 | MS.gene89508:intron | 30.0% | |
| TCGATGATTTATTGGCATTA+GGG | + | chr5.4:48850052-48850071 | None:intergenic | 30.0% | |
| TGATTTAGTCGATTAGATCT+TGG | + | chr5.4:48849001-48849020 | None:intergenic | 30.0% | |
| TGTACTATGCAACTATGAAA+TGG | + | chr5.4:48847832-48847851 | None:intergenic | 30.0% | |
| TTATTTAATGACTGCAATGC+AGG | - | chr5.4:48851328-48851347 | MS.gene89508:intron | 30.0% | |
| TTCACCATTAGAATAAGACT+AGG | - | chr5.4:48849852-48849871 | MS.gene89508:intron | 30.0% | |
| TTCATCAACGACATAAAACA+AGG | + | chr5.4:48847347-48847366 | None:intergenic | 30.0% | |
| TTCGATGATTTATTGGCATT+AGG | + | chr5.4:48850053-48850072 | None:intergenic | 30.0% | |
| TTTCATAGTTGCATAGTACA+AGG | - | chr5.4:48847832-48847851 | MS.gene89508:CDS | 30.0% | |
| TTTCCATTTCTACCTTTCTT+TGG | + | chr5.4:48851730-48851749 | None:intergenic | 30.0% | |
| TTTCTCTATGATATAGACCT+TGG | - | chr5.4:48847054-48847073 | MS.gene89508:intron | 30.0% | |
| TTTGACGGAAATGAAATTGT+AGG | + | chr5.4:48851521-48851540 | None:intergenic | 30.0% | |
| ! | AAGAGTAAGGATTTTGTAAG+TGG | + | chr5.4:48846136-48846155 | None:intergenic | 30.0% |
| ! | ACATTTTACTGCCTATGATT+TGG | - | chr5.4:48846979-48846998 | MS.gene89508:intron | 30.0% |
| ! | AGAGTAAGGATTTTGTAAGT+GGG | + | chr5.4:48846135-48846154 | None:intergenic | 30.0% |
| ! | ATAAGACTAGGTTTGTTTGA+TGG | - | chr5.4:48849864-48849883 | MS.gene89508:intron | 30.0% |
| ! | CTGAATTATTAGAACGGATT+TGG | + | chr5.4:48847773-48847792 | None:intergenic | 30.0% |
| ! | CTTCTTTTGATCCTAAACTT+TGG | - | chr5.4:48846392-48846411 | MS.gene89508:CDS | 30.0% |
| ! | GGGCATGTATAGAATAATTT+TGG | + | chr5.4:48851247-48851266 | None:intergenic | 30.0% |
| ! | TAAGACTAGGTTTGTTTGAT+GGG | - | chr5.4:48849865-48849884 | MS.gene89508:intron | 30.0% |
| ! | TATGATTTGGATCATTGGAA+GGG | - | chr5.4:48846992-48847011 | MS.gene89508:intron | 30.0% |
| ! | TCCATGCACTCTAATTTTTA+TGG | - | chr5.4:48849419-48849438 | MS.gene89508:intron | 30.0% |
| ! | TTATGTCGTTGATGAATACT+TGG | - | chr5.4:48847351-48847370 | MS.gene89508:intron | 30.0% |
| !! | AAATCATCGAAGGTTGTTTT+AGG | - | chr5.4:48850062-48850081 | MS.gene89508:CDS | 30.0% |
| !! | CAAACCTAGTCTTATTCTAA+TGG | + | chr5.4:48849859-48849878 | None:intergenic | 30.0% |
| !!! | ACTTTTAAGTTGCATTGACA+TGG | + | chr5.4:48851174-48851193 | None:intergenic | 30.0% |
| !!! | GAAATTTTTAGGTTGTACTC+AGG | + | chr5.4:48848905-48848924 | None:intergenic | 30.0% |
| !!! | GTTGTTTTAGGAAACTACTT+TGG | - | chr5.4:48850074-48850093 | MS.gene89508:CDS | 30.0% |
| !!! | TGTAATTTTGGTTATGGGAT+TGG | - | chr5.4:48850241-48850260 | MS.gene89508:intron | 30.0% |
| AAACTCCAATATGGCACAAT+TGG | - | chr5.4:48849897-48849916 | MS.gene89508:intron | 35.0% | |
| AAATCCAGTGAAACAATTGG+TGG | - | chr5.4:48851747-48851766 | MS.gene89508:CDS | 35.0% | |
| AACAATGTCTTACATAGCTC+TGG | - | chr5.4:48847648-48847667 | MS.gene89508:CDS | 35.0% | |
| AAGCCAAAGAAAGGTAGAAA+TGG | - | chr5.4:48851724-48851743 | MS.gene89508:CDS | 35.0% | |
| AATCCAACCAAACTCCAATA+TGG | - | chr5.4:48849888-48849907 | MS.gene89508:intron | 35.0% | |
| AATCCAGTGAAACAATTGGT+GGG | - | chr5.4:48851748-48851767 | MS.gene89508:CDS | 35.0% | |
| AATTGTGCCATATTGGAGTT+TGG | + | chr5.4:48849898-48849917 | None:intergenic | 35.0% | |
| ACTATGCAACTATGAAATGG+GGG | + | chr5.4:48847829-48847848 | None:intergenic | 35.0% | |
| AGCATAGAAGAAAACTAACC+TGG | + | chr5.4:48850512-48850531 | None:intergenic | 35.0% | |
| AGGTACATGAGTTTGTGAAT+CGG | + | chr5.4:48846089-48846108 | None:intergenic | 35.0% | |
| ATACTCCAAAAATTCACAGC+TGG | - | chr5.4:48848829-48848848 | MS.gene89508:intron | 35.0% | |
| ATAGTTGCATAGTACAAGGA+CGG | - | chr5.4:48847836-48847855 | MS.gene89508:CDS | 35.0% | |
| ATATATTTAGGGACCCAAGA+TGG | - | chr5.4:48846816-48846835 | MS.gene89508:intron | 35.0% | |
| ATCCAGAACGATAATGTGTT+TGG | + | chr5.4:48850151-48850170 | None:intergenic | 35.0% | |
| ATTGGATCAAAGTCAAGAGA+GGG | - | chr5.4:48850259-48850278 | MS.gene89508:intron | 35.0% | |
| ATTTAATGACTGCAATGCAG+GGG | - | chr5.4:48851330-48851349 | MS.gene89508:intron | 35.0% | |
| CAATGTGACAGAAATTGACA+TGG | + | chr5.4:48851650-48851669 | None:intergenic | 35.0% | |
| CAGCAGTAAGAATAACTTGA+GGG | + | chr5.4:48846372-48846391 | None:intergenic | 35.0% | |
| CATGTCAATTTCTGTCACAT+TGG | - | chr5.4:48851648-48851667 | MS.gene89508:CDS | 35.0% | |
| CCAAAACTGCTAGACAAAAA+TGG | - | chr5.4:48847929-48847948 | MS.gene89508:CDS | 35.0% | |
| CTAAGTTTCACCAACTAAGT+AGG | + | chr5.4:48848238-48848257 | None:intergenic | 35.0% | |
| CTCACTATAAGACACAAATG+AGG | + | chr5.4:48849364-48849383 | None:intergenic | 35.0% | |
| CTCATTTGTGTCTTATAGTG+AGG | - | chr5.4:48849362-48849381 | MS.gene89508:intron | 35.0% | |
| CTTCCAATGATCCAAATCAT+AGG | + | chr5.4:48846993-48847012 | None:intergenic | 35.0% | |
| CTTCGAGTATACTCTTCTAA+TGG | - | chr5.4:48846646-48846665 | MS.gene89508:intron | 35.0% | |
| GCATAGAAGAAAACTAACCT+GGG | + | chr5.4:48850511-48850530 | None:intergenic | 35.0% | |
| GGTAAAGGGATAAGATTGAA+TGG | - | chr5.4:48846322-48846341 | MS.gene89508:CDS | 35.0% | |
| GTAAATACCCTTGGAGTTAT+AGG | - | chr5.4:48850026-48850045 | MS.gene89508:CDS | 35.0% | |
| TACTTTATCAATGGTCCCAA+TGG | - | chr5.4:48848674-48848693 | MS.gene89508:intron | 35.0% | |
| TATACCGAGTTATCAATGGT+GGG | - | chr5.4:48846270-48846289 | MS.gene89508:CDS | 35.0% | |
| TATACTCTTCTAATGGTCTC+CGG | - | chr5.4:48846653-48846672 | MS.gene89508:intron | 35.0% | |
| TATATTTAGGGACCCAAGAT+GGG | - | chr5.4:48846817-48846836 | MS.gene89508:intron | 35.0% | |
| TCAATCAACGTATCTATTCC+AGG | - | chr5.4:48849114-48849133 | MS.gene89508:intron | 35.0% | |
| TGAAGAAGGTGGTTATTTGT+TGG | - | chr5.4:48851876-48851895 | MS.gene89508:CDS | 35.0% | |
| TGGAAATCCAGTGAAACAAT+TGG | - | chr5.4:48851744-48851763 | MS.gene89508:CDS | 35.0% | |
| TTACTTGACAAAGCATGCAA+AGG | - | chr5.4:48849770-48849789 | MS.gene89508:intron | 35.0% | |
| TTGAACCAACGAAAGAGATT+TGG | - | chr5.4:48850975-48850994 | MS.gene89508:CDS | 35.0% | |
| TTGATCAACGGCATAAAACA+AGG | + | chr5.4:48847615-48847634 | None:intergenic | 35.0% | |
| TTGGTACTAATCTACAAGGA+CGG | + | chr5.4:48850100-48850119 | None:intergenic | 35.0% | |
| TTTGAAGGTGGGAAACTAAT+TGG | - | chr5.4:48846926-48846945 | MS.gene89508:intron | 35.0% | |
| ! | AATTAGTTTCCCACCTTCAA+AGG | + | chr5.4:48846927-48846946 | None:intergenic | 35.0% |
| ! | AATTTGGAACTCCATTGACA+CGG | + | chr5.4:48847888-48847907 | None:intergenic | 35.0% |
| ! | AGTTACTGACCTTACTGATT+CGG | + | chr5.4:48846420-48846439 | None:intergenic | 35.0% |
| ! | CATTAGAAGAGTATACTCGA+AGG | + | chr5.4:48846648-48846667 | None:intergenic | 35.0% |
| ! | CTATGATTTGGATCATTGGA+AGG | - | chr5.4:48846991-48847010 | MS.gene89508:intron | 35.0% |
| ! | TAAGGATTTTGTAAGTGGGT+TGG | + | chr5.4:48846131-48846150 | None:intergenic | 35.0% |
| ! | TAAGTCCAGCTGTGAATTTT+TGG | + | chr5.4:48848837-48848856 | None:intergenic | 35.0% |
| ! | TACAAGCTTGTTTCAGAGTT+AGG | - | chr5.4:48851607-48851626 | MS.gene89508:CDS | 35.0% |
| ! | TCAGGTTACTTTGCAAGATT+TGG | - | chr5.4:48847789-48847808 | MS.gene89508:CDS | 35.0% |
| ! | TTTTAGCAACTTCAACTGCT+CGG | + | chr5.4:48850211-48850230 | None:intergenic | 35.0% |
| !! | AAATCTCTTTCGTTGGTTCA+AGG | + | chr5.4:48850976-48850995 | None:intergenic | 35.0% |
| !! | AAGTTCCAAGCATTGATCAA+CGG | + | chr5.4:48847627-48847646 | None:intergenic | 35.0% |
| !! | ACTCTGAAACAAGCTTGTAA+TGG | + | chr5.4:48851606-48851625 | None:intergenic | 35.0% |
| !! | ATTTTGGTAATTTTGTGCGG+TGG | - | chr5.4:48850368-48850387 | MS.gene89508:intron | 35.0% |
| !! | CCATTTTTGTCTAGCAGTTT+TGG | + | chr5.4:48847932-48847951 | None:intergenic | 35.0% |
| !! | CTATTTAATTTGCTTGGCGT+GGG | + | chr5.4:48848808-48848827 | None:intergenic | 35.0% |
| !! | GTAATCAAACTTTTCAGGGA+TGG | - | chr5.4:48849731-48849750 | MS.gene89508:intron | 35.0% |
| !! | TATTTAATTTGCTTGGCGTG+GGG | + | chr5.4:48848807-48848826 | None:intergenic | 35.0% |
| !! | TCTTTAGAGCATACTTGGTT+TGG | + | chr5.4:48849924-48849943 | None:intergenic | 35.0% |
| !! | TGAGAAAAGTACCTTCCATT+GGG | + | chr5.4:48848692-48848711 | None:intergenic | 35.0% |
| !! | TTACATCATTTTTCGCAACC+TGG | + | chr5.4:48849135-48849154 | None:intergenic | 35.0% |
| !! | TTCTAAGAAGCCGGTTATTT+TGG | - | chr5.4:48850352-48850371 | MS.gene89508:intron | 35.0% |
| !!! | GGTTTTCTTTAGAGCATACT+TGG | + | chr5.4:48849929-48849948 | None:intergenic | 35.0% |
| !!! | GTGAAGGTTGTTGTTTTTGA+CGG | + | chr5.4:48851536-48851555 | None:intergenic | 35.0% |
| AACTGCATGCAATGTAGTTG+TGG | - | chr5.4:48850730-48850749 | MS.gene89508:intron | 40.0% | |
| AGACCTTGGATGATTAACTC+CGG | - | chr5.4:48847068-48847087 | MS.gene89508:intron | 40.0% | |
| AGCCAAACACATTATCGTTC+TGG | - | chr5.4:48850146-48850165 | MS.gene89508:intron | 40.0% | |
| AGGTTATGCAAAAACACCAG+AGG | - | chr5.4:48848470-48848489 | MS.gene89508:intron | 40.0% | |
| ATATTTAGGGACCCAAGATG+GGG | - | chr5.4:48846818-48846837 | MS.gene89508:intron | 40.0% | |
| ATCCAGTGAAACAATTGGTG+GGG | - | chr5.4:48851749-48851768 | MS.gene89508:CDS | 40.0% | |
| ATTAGGGCCTATAACTCCAA+GGG | + | chr5.4:48850036-48850055 | None:intergenic | 40.0% | |
| ATTTGGCTGAACTGACTAGA+TGG | - | chr5.4:48850992-48851011 | MS.gene89508:CDS | 40.0% | |
| CTAAAAGACAAATCAGGCGA+CGG | + | chr5.4:48847261-48847280 | None:intergenic | 40.0% | |
| CTCATTCTCATGTCTGTCAT+TGG | + | chr5.4:48851400-48851419 | None:intergenic | 40.0% | |
| CTGCTCAATCTTTGATCAGA+TGG | - | chr5.4:48850694-48850713 | MS.gene89508:intron | 40.0% | |
| CTGTTTGTGAAGCCAAAGAA+AGG | - | chr5.4:48851715-48851734 | MS.gene89508:CDS | 40.0% | |
| CTTAGTAGAGCAAATGAGAG+TGG | - | chr5.4:48851841-48851860 | MS.gene89508:CDS | 40.0% | |
| CTTCAAGGAGATTCCTTTGA+AGG | - | chr5.4:48846911-48846930 | MS.gene89508:intron | 40.0% | |
| CTTCCAAGAGTAAATACCCT+TGG | - | chr5.4:48850017-48850036 | MS.gene89508:CDS | 40.0% | |
| GACACCGAAATGATTCAAAC+CGG | + | chr5.4:48846675-48846694 | None:intergenic | 40.0% | |
| GATTGGATCAAAGTCAAGAG+AGG | - | chr5.4:48850258-48850277 | MS.gene89508:intron | 40.0% | |
| GCAGCAGTAAGAATAACTTG+AGG | + | chr5.4:48846373-48846392 | None:intergenic | 40.0% | |
| GGGGACTCTAATGAAAATGT+GGG | + | chr5.4:48848775-48848794 | None:intergenic | 40.0% | |
| GGGTATTTACTCTTGGAAGT+GGG | + | chr5.4:48850016-48850035 | None:intergenic | 40.0% | |
| GTATACCGAGTTATCAATGG+TGG | - | chr5.4:48846269-48846288 | MS.gene89508:CDS | 40.0% | |
| GTATCGAATGAGTGGTTGAT+TGG | + | chr5.4:48851564-48851583 | None:intergenic | 40.0% | |
| GTCAGGTAACATCTGAAGAT+TGG | - | chr5.4:48850607-48850626 | MS.gene89508:intron | 40.0% | |
| GTCGATTAGATCTTGGTATG+AGG | + | chr5.4:48848994-48849013 | None:intergenic | 40.0% | |
| GTTGAGATTGCAGAAGAGTA+AGG | + | chr5.4:48846149-48846168 | None:intergenic | 40.0% | |
| TATGTAGGTGATTGGAACTG+AGG | - | chr5.4:48846733-48846752 | MS.gene89508:intron | 40.0% | |
| TCGGTATACCGAGTTATCAA+TGG | - | chr5.4:48846266-48846285 | MS.gene89508:CDS | 40.0% | |
| TGAATAGATTGTGTAGGGCA+CGG | + | chr5.4:48849836-48849855 | None:intergenic | 40.0% | |
| TGGGGACTCTAATGAAAATG+TGG | + | chr5.4:48848776-48848795 | None:intergenic | 40.0% | |
| TTATCAATGGTCCCAATGGA+AGG | - | chr5.4:48848678-48848697 | MS.gene89508:intron | 40.0% | |
| TTATGCCGTTGATCAATGCT+TGG | - | chr5.4:48847619-48847638 | MS.gene89508:CDS | 40.0% | |
| TTCAGCCAAATCTCTTTCGT+TGG | + | chr5.4:48850983-48851002 | None:intergenic | 40.0% | |
| TTGGACCAATTGTGCCATAT+TGG | + | chr5.4:48849905-48849924 | None:intergenic | 40.0% | |
| TTTAATGACTGCAATGCAGG+GGG | - | chr5.4:48851331-48851350 | MS.gene89508:intron | 40.0% | |
| TTTAGTTATGCCTTTGCCAG+TGG | - | chr5.4:48849338-48849357 | MS.gene89508:intron | 40.0% | |
| TTTGGATCATTGGAAGGGTT+TGG | - | chr5.4:48846997-48847016 | MS.gene89508:intron | 40.0% | |
| ! | AAGGAGATTCCTTTGAAGGT+GGG | - | chr5.4:48846915-48846934 | MS.gene89508:intron | 40.0% |
| ! | ACTTTGGTACCGAATCAGTA+AGG | - | chr5.4:48846408-48846427 | MS.gene89508:CDS | 40.0% |
| ! | AGGGTATTTACTCTTGGAAG+TGG | + | chr5.4:48850017-48850036 | None:intergenic | 40.0% |
| ! | AGGTGGTTATTTGTTGGTTG+TGG | - | chr5.4:48851882-48851901 | MS.gene89508:CDS | 40.0% |
| ! | CTGCCTATGATTTGGATCAT+TGG | - | chr5.4:48846987-48847006 | MS.gene89508:intron | 40.0% |
| ! | CTTTTGGACCTGTGTAGAAA+CGG | + | chr5.4:48851459-48851478 | None:intergenic | 40.0% |
| ! | GGTGGTTATTTGTTGGTTGT+GGG | - | chr5.4:48851883-48851902 | MS.gene89508:CDS | 40.0% |
| ! | GGTTACTTTGCAAGATTTGG+CGG | - | chr5.4:48847792-48847811 | MS.gene89508:CDS | 40.0% |
| ! | GTCTCCGGTTTGAATCATTT+CGG | - | chr5.4:48846668-48846687 | MS.gene89508:intron | 40.0% |
| ! | GTGTTGCTAATGCTGGTAAA+GGG | - | chr5.4:48846308-48846327 | MS.gene89508:CDS | 40.0% |
| ! | TATCGTTCTGGATGTCTTGA+TGG | - | chr5.4:48850158-48850177 | MS.gene89508:intron | 40.0% |
| ! | TCATCCCACCATTGATAACT+CGG | + | chr5.4:48846277-48846296 | None:intergenic | 40.0% |
| ! | TCTATTGAAGGTGTGAGCAA+TGG | - | chr5.4:48848212-48848231 | MS.gene89508:intron | 40.0% |
| ! | TGGTTGATTGGTTGATGTGA+AGG | + | chr5.4:48851552-48851571 | None:intergenic | 40.0% |
| ! | TTATTTGTTGGTTGTGGGAG+AGG | - | chr5.4:48851888-48851907 | MS.gene89508:CDS | 40.0% |
| ! | TTTGGATCATGAGGTGGTTT+TGG | - | chr5.4:48847672-48847691 | MS.gene89508:CDS | 40.0% |
| !! | ACTCCAAGGGTATTTACTCT+TGG | + | chr5.4:48850023-48850042 | None:intergenic | 40.0% |
| !! | ATTATTTGGGCTGGTTATCC+TGG | - | chr5.4:48850437-48850456 | MS.gene89508:intron | 40.0% |
| !! | CTGATTCGGTACCAAAGTTT+AGG | + | chr5.4:48846406-48846425 | None:intergenic | 40.0% |
| !! | GCTATTTAATTTGCTTGGCG+TGG | + | chr5.4:48848809-48848828 | None:intergenic | 40.0% |
| !! | GTGAGAAAAGTACCTTCCAT+TGG | + | chr5.4:48848693-48848712 | None:intergenic | 40.0% |
| !! | TATGCTGTTTCCTATGTGAG+AGG | - | chr5.4:48846887-48846906 | MS.gene89508:intron | 40.0% |
| !! | TCTTTTGGGTACCATGTCAT+TGG | + | chr5.4:48851364-48851383 | None:intergenic | 40.0% |
| !!! | GAGGTGGTTTTGGATACATT+TGG | - | chr5.4:48847682-48847701 | MS.gene89508:CDS | 40.0% |
| !!! | GTCTTACATAGCTCTGGTTT+TGG | - | chr5.4:48847654-48847673 | MS.gene89508:CDS | 40.0% |
| !!! | GTTTTCGAGTATCGAATGAG+TGG | + | chr5.4:48851572-48851591 | None:intergenic | 40.0% |
| AACCCCACCAATTGTTTCAC+TGG | + | chr5.4:48851754-48851773 | None:intergenic | 45.0% | |
| AACTGACTAGATGGTAGCAG+AGG | - | chr5.4:48851001-48851020 | MS.gene89508:CDS | 45.0% | |
| ACAATGCTGGACAAGCTCAA+GGG | - | chr5.4:48846768-48846787 | MS.gene89508:intron | 45.0% | |
| ACTGACTAGATGGTAGCAGA+GGG | - | chr5.4:48851002-48851021 | MS.gene89508:CDS | 45.0% | |
| AGAACCTACCGTTTCTACAC+AGG | - | chr5.4:48851448-48851467 | MS.gene89508:intron | 45.0% | |
| AGATTGAATGGCAGTGTTGC+AGG | - | chr5.4:48846334-48846353 | MS.gene89508:CDS | 45.0% | |
| ATAGTACAAGGACGGTCTAG+TGG | - | chr5.4:48847844-48847863 | MS.gene89508:CDS | 45.0% | |
| ATGAGAGCTGATCCATCATC+AGG | - | chr5.4:48851415-48851434 | MS.gene89508:intron | 45.0% | |
| ATTGGAGGGATTATTTGGGC+TGG | - | chr5.4:48850428-48850447 | MS.gene89508:intron | 45.0% | |
| CATTAGGGCCTATAACTCCA+AGG | + | chr5.4:48850037-48850056 | None:intergenic | 45.0% | |
| GAGCCAAAGACATTGTGTCA+CGG | - | chr5.4:48846185-48846204 | MS.gene89508:CDS | 45.0% | |
| GTAGAAACGGTAGGTTCTAC+CGG | + | chr5.4:48851446-48851465 | None:intergenic | 45.0% | |
| GTAGCTGATGTACTTCAAGC+TGG | - | chr5.4:48848498-48848517 | MS.gene89508:intron | 45.0% | |
| GTGCCATATTGGAGTTTGGT+TGG | + | chr5.4:48849894-48849913 | None:intergenic | 45.0% | |
| TAAGACACAAATGAGGCCAC+TGG | + | chr5.4:48849357-48849376 | None:intergenic | 45.0% | |
| TACAATGCTGGACAAGCTCA+AGG | - | chr5.4:48846767-48846786 | MS.gene89508:intron | 45.0% | |
| TAGAAACGGTAGGTTCTACC+GGG | + | chr5.4:48851445-48851464 | None:intergenic | 45.0% | |
| TCACCGGAGTTAATCATCCA+AGG | + | chr5.4:48847074-48847093 | None:intergenic | 45.0% | |
| TCCTATGTGAGAGGACTTCA+AGG | - | chr5.4:48846896-48846915 | MS.gene89508:intron | 45.0% | |
| TCCTTGAAGTCCTCTCACAT+AGG | + | chr5.4:48846900-48846919 | None:intergenic | 45.0% | |
| TCTTGGAAGTGGGAGAATTG+AGG | + | chr5.4:48850006-48850025 | None:intergenic | 45.0% | |
| TGAGCAATGGCCTACTTAGT+TGG | - | chr5.4:48848225-48848244 | MS.gene89508:intron | 45.0% | |
| TGTGCTTACAACCGTGTCAA+TGG | - | chr5.4:48847874-48847893 | MS.gene89508:CDS | 45.0% | |
| TTAATGACTGCAATGCAGGG+GGG | - | chr5.4:48851332-48851351 | MS.gene89508:intron | 45.0% | |
| TTGGCGTGGGGAATATATGT+GGG | + | chr5.4:48848795-48848814 | None:intergenic | 45.0% | |
| ! | AAATGAGAGTGGTGTCAAGG+TGG | - | chr5.4:48851852-48851871 | MS.gene89508:CDS | 45.0% |
| ! | AACCGGCTTCTTAGAAGCTT+TGG | + | chr5.4:48850348-48850367 | None:intergenic | 45.0% |
| ! | AAGCTCAAGGGATGACGTTT+TGG | - | chr5.4:48846780-48846799 | MS.gene89508:intron | 45.0% |
| ! | ACAAATACTGGAAGCATGGC+TGG | - | chr5.4:48851676-48851695 | MS.gene89508:CDS | 45.0% |
| ! | AGCAAATGAGAGTGGTGTCA+AGG | - | chr5.4:48851849-48851868 | MS.gene89508:CDS | 45.0% |
| ! | AGCTCAAGGGATGACGTTTT+GGG | - | chr5.4:48846781-48846800 | MS.gene89508:intron | 45.0% |
| ! | CAAGGAGATTCCTTTGAAGG+TGG | - | chr5.4:48846914-48846933 | MS.gene89508:intron | 45.0% |
| ! | GCAAGAGGAGTATACAATGC+TGG | - | chr5.4:48846755-48846774 | MS.gene89508:intron | 45.0% |
| ! | GTGTTTGGTGACTATAACCC+AGG | - | chr5.4:48850491-48850510 | MS.gene89508:intron | 45.0% |
| ! | TGCCAAAGCTTCTAAGAAGC+CGG | - | chr5.4:48850343-48850362 | MS.gene89508:intron | 45.0% |
| ! | TGGCTCTTTGAGAGATGGTA+AGG | + | chr5.4:48846171-48846190 | None:intergenic | 45.0% |
| !! | GCACGGTCGATTTGAGATAT+CGG | + | chr5.4:48849819-48849838 | None:intergenic | 45.0% |
| !! | GGTGTTGCTAATGCTGGTAA+AGG | - | chr5.4:48846307-48846326 | MS.gene89508:CDS | 45.0% |
| !! | GTCTTTGGCTCTTTGAGAGA+TGG | + | chr5.4:48846176-48846195 | None:intergenic | 45.0% |
| !!! | AGCTCTGGTTTTGGATCATG+AGG | - | chr5.4:48847663-48847682 | MS.gene89508:CDS | 45.0% |
| !!! | GGATTTTGTAAGTGGGTTGG+TGG | + | chr5.4:48846128-48846147 | None:intergenic | 45.0% |
| !!! | TCTGGTTTTGGATCATGAGG+TGG | - | chr5.4:48847666-48847685 | MS.gene89508:CDS | 45.0% |
| ACAAATGAGGCCACTGGCAA+AGG | + | chr5.4:48849351-48849370 | None:intergenic | 50.0% | |
| ACATCAGCTACAGCATCCTC+TGG | + | chr5.4:48848489-48848508 | None:intergenic | 50.0% | |
| CAGCTTCAAGAGCAACGTCT+AGG | + | chr5.4:48849950-48849969 | None:intergenic | 50.0% | |
| CATTGTGTCACGGCTCACAT+TGG | - | chr5.4:48846195-48846214 | MS.gene89508:CDS | 50.0% | |
| CTTGGCGTGGGGAATATATG+TGG | + | chr5.4:48848796-48848815 | None:intergenic | 50.0% | |
| CTTGTCCTCTTCCCCATCTT+GGG | + | chr5.4:48846832-48846851 | None:intergenic | 50.0% | |
| GACAGCTGGAGAAGATCCTT+TGG | - | chr5.4:48846853-48846872 | MS.gene89508:intron | 50.0% | |
| GAGCCGTGACACAATGTCTT+TGG | + | chr5.4:48846191-48846210 | None:intergenic | 50.0% | |
| GATCCATCATCAGGCTATCC+CGG | - | chr5.4:48851424-48851443 | MS.gene89508:intron | 50.0% | |
| GCTCTTGAAGCTGCAAGAAG+TGG | - | chr5.4:48849957-48849976 | MS.gene89508:intron | 50.0% | |
| GCTGGTTATCCTGGTGAACT+TGG | - | chr5.4:48850446-48850465 | MS.gene89508:intron | 50.0% | |
| GGCTTCACAAACAGCAACAC+AGG | + | chr5.4:48851709-48851728 | None:intergenic | 50.0% | |
| GGTGTCAAGGTGGTTGAAGA+AGG | - | chr5.4:48851862-48851881 | MS.gene89508:CDS | 50.0% | |
| GGTTATCCTGGTGAACTTGG+TGG | - | chr5.4:48850449-48850468 | MS.gene89508:intron | 50.0% | |
| GTCAAGGTGGTTGAAGAAGG+TGG | - | chr5.4:48851865-48851884 | MS.gene89508:CDS | 50.0% | |
| GTGAATCGGCATGAACGAGT+TGG | + | chr5.4:48846075-48846094 | None:intergenic | 50.0% | |
| GTGATTGGAACTGAGGCAAG+AGG | - | chr5.4:48846740-48846759 | MS.gene89508:intron | 50.0% | |
| TAACTCGGTATACCGAGTCG+AGG | + | chr5.4:48846262-48846281 | None:intergenic | 50.0% | |
| TCAGGGATGGATGTAGAGTG+TGG | - | chr5.4:48849744-48849763 | MS.gene89508:intron | 50.0% | |
| TCTTGTCCTCTTCCCCATCT+TGG | + | chr5.4:48846833-48846852 | None:intergenic | 50.0% | |
| TGGACCTGTGTAGAAACGGT+AGG | + | chr5.4:48851455-48851474 | None:intergenic | 50.0% | |
| TGGCGTGGGGAATATATGTG+GGG | + | chr5.4:48848794-48848813 | None:intergenic | 50.0% | |
| ! | AATCGGCATGAACGAGTTGG+TGG | + | chr5.4:48846072-48846091 | None:intergenic | 50.0% |
| ! | ATCCTGGTGAACTTGGTGGA+AGG | - | chr5.4:48850453-48850472 | MS.gene89508:intron | 50.0% |
| ! | GCTCTTGCTCAGGTTGTGTT+TGG | - | chr5.4:48850476-48850495 | MS.gene89508:intron | 50.0% |
| ! | TCCTGGTGAACTTGGTGGAA+GGG | - | chr5.4:48850454-48850473 | MS.gene89508:intron | 50.0% |
| ! | TTTGAGAGTGTGACGGTGGA+AGG | - | chr5.4:48851772-48851791 | MS.gene89508:CDS | 50.0% |
| !! | TTGCACGGTGTTGCTAATGC+TGG | - | chr5.4:48846301-48846320 | MS.gene89508:CDS | 50.0% |
| !! | TTGGTGGTGTCACAGGAGTA+TGG | + | chr5.4:48846112-48846131 | None:intergenic | 50.0% |
| ACGGTGGAAGGAGGTGGAAA+GGG | - | chr5.4:48851784-48851803 | MS.gene89508:CDS | 55.0% | |
| ATACCGAGTCGAGGAATGGC+AGG | + | chr5.4:48846253-48846272 | None:intergenic | 55.0% | |
| CGGTATACCGAGTCGAGGAA+TGG | + | chr5.4:48846257-48846276 | None:intergenic | 55.0% | |
| CTACCGGGATAGCCTGATGA+TGG | + | chr5.4:48851430-48851449 | None:intergenic | 55.0% | |
| GGAAGAGGACAAGAGACAGC+TGG | - | chr5.4:48846839-48846858 | MS.gene89508:intron | 55.0% | |
| GGGGGAGACTACCAATGACA+TGG | - | chr5.4:48851350-48851369 | MS.gene89508:intron | 55.0% | |
| ! | CAGTGTTACTGCACGCAGTC+AGG | - | chr5.4:48850590-48850609 | MS.gene89508:intron | 55.0% |
| ! | GGTGGGGTTTGAGAGTGTGA+CGG | - | chr5.4:48851765-48851784 | MS.gene89508:CDS | 55.0% |
| !! | AAGTGGGTTGGTGGTGTCAC+AGG | + | chr5.4:48846119-48846138 | None:intergenic | 55.0% |
| !! | CGAGTTGGTGGTAGCGAGTT+AGG | + | chr5.4:48846060-48846079 | None:intergenic | 55.0% |
| !! | GTGGTGTCACAGGAGTATGG+AGG | + | chr5.4:48846109-48846128 | None:intergenic | 55.0% |
| !! | TGGTGGGATGAAGCGTTGCA+CGG | - | chr5.4:48846286-48846305 | MS.gene89508:CDS | 55.0% |
| AGGGACCCAAGATGGGGAAG+AGG | - | chr5.4:48846824-48846843 | MS.gene89508:intron | 60.0% | |
| AGTGTGACGGTGGAAGGAGG+TGG | - | chr5.4:48851778-48851797 | MS.gene89508:CDS | 60.0% | |
| GACGGTGGAAGGAGGTGGAA+AGG | - | chr5.4:48851783-48851802 | MS.gene89508:CDS | 60.0% | |
| GCCCTTCCACCAAGTTCACC+AGG | + | chr5.4:48850458-48850477 | None:intergenic | 60.0% | |
| GCTCCTGCCATTCCTCGACT+CGG | - | chr5.4:48846247-48846266 | MS.gene89508:CDS | 60.0% | |
| GGAGGTGGAAAGGGCGAAGT+TGG | - | chr5.4:48851793-48851812 | MS.gene89508:CDS | 60.0% | |
| TGGTGGAAGGGCTCTTGCTC+AGG | - | chr5.4:48850466-48850485 | MS.gene89508:intron | 60.0% | |
| ! | GAGAGTGTGACGGTGGAAGG+AGG | - | chr5.4:48851775-48851794 | MS.gene89508:CDS | 60.0% |
| ! | GGGGTTTGAGAGTGTGACGG+TGG | - | chr5.4:48851768-48851787 | MS.gene89508:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 48846016 | 48851939 | 48846016 | ID=MS.gene89508 |
| chr5.4 | mRNA | 48846016 | 48851939 | 48846016 | ID=MS.gene89508.t1;Parent=MS.gene89508 |
| chr5.4 | exon | 48851526 | 48851939 | 48851526 | ID=MS.gene89508.t1.exon1;Parent=MS.gene89508.t1 |
| chr5.4 | CDS | 48851526 | 48851939 | 48851526 | ID=cds.MS.gene89508.t1;Parent=MS.gene89508.t1 |
| chr5.4 | exon | 48850913 | 48851215 | 48850913 | ID=MS.gene89508.t1.exon2;Parent=MS.gene89508.t1 |
| chr5.4 | CDS | 48850913 | 48851215 | 48850913 | ID=cds.MS.gene89508.t1;Parent=MS.gene89508.t1 |
| chr5.4 | exon | 48849993 | 48850162 | 48849993 | ID=MS.gene89508.t1.exon3;Parent=MS.gene89508.t1 |
| chr5.4 | CDS | 48849993 | 48850162 | 48849993 | ID=cds.MS.gene89508.t1;Parent=MS.gene89508.t1 |
| chr5.4 | exon | 48849436 | 48849533 | 48849436 | ID=MS.gene89508.t1.exon4;Parent=MS.gene89508.t1 |
| chr5.4 | CDS | 48849436 | 48849533 | 48849436 | ID=cds.MS.gene89508.t1;Parent=MS.gene89508.t1 |
| chr5.4 | exon | 48847443 | 48848207 | 48847443 | ID=MS.gene89508.t1.exon5;Parent=MS.gene89508.t1 |
| chr5.4 | CDS | 48847443 | 48848207 | 48847443 | ID=cds.MS.gene89508.t1;Parent=MS.gene89508.t1 |
| chr5.4 | exon | 48846016 | 48846605 | 48846016 | ID=MS.gene89508.t1.exon6;Parent=MS.gene89508.t1 |
| chr5.4 | CDS | 48846016 | 48846605 | 48846016 | ID=cds.MS.gene89508.t1;Parent=MS.gene89508.t1 |
| Gene Sequence |
| Protein sequence |
