AlfalfaGEDB | MS.gene90362

M. sativa cultivar XinJiangDaYe / MS.gene90362

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90362.t1	XP_013465603.1	95.3	320	8	4	1	317	1	316	1.50E-139	505.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90362.t1	Q9SAH7	48.5	324	129	7	3	317	4	298	1.4e-64	248.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90362.t1	A0A072VC75	95.3	320	8	4	1	317	1	316	1.1e-139	505.8

TFs/TRs:

Gene ID	Type	Classification
MS.gene90362.t1	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050961	MS.gene90362	0.804435	2.16E-49	-1.69E-46
MS.gene051226	MS.gene90362	0.841231	5.39E-58	-1.69E-46
MS.gene051837	MS.gene90362	0.848447	6.09E-60	-1.69E-46
MS.gene051854	MS.gene90362	0.808951	2.41E-50	-1.69E-46
MS.gene051959	MS.gene90362	0.821224	4.52E-53	-1.69E-46
MS.gene051960	MS.gene90362	0.815558	8.69E-52	-1.69E-46
MS.gene052091	MS.gene90362	0.803788	2.95E-49	-1.69E-46
MS.gene053932	MS.gene90362	0.83515	1.98E-56	-1.69E-46
MS.gene054617	MS.gene90362	0.804061	2.59E-49	-1.69E-46
MS.gene055549	MS.gene90362	0.845881	3.08E-59	-1.69E-46
MS.gene055550	MS.gene90362	0.848689	5.22E-60	-1.69E-46
MS.gene055551	MS.gene90362	0.836839	7.39E-57	-1.69E-46
MS.gene056365	MS.gene90362	0.814704	1.35E-51	-1.69E-46
MS.gene057093	MS.gene90362	0.851049	1.14E-60	-1.69E-46
MS.gene057167	MS.gene90362	0.823777	1.15E-53	-1.69E-46
MS.gene057422	MS.gene90362	0.814037	1.89E-51	-1.69E-46
MS.gene057622	MS.gene90362	0.802527	5.38E-49	-1.69E-46
MS.gene06023	MS.gene90362	0.823956	1.05E-53	-1.69E-46
MS.gene060446	MS.gene90362	0.815984	6.98E-52	-1.69E-46
MS.gene06061	MS.gene90362	0.807294	5.42E-50	-1.69E-46
MS.gene060964	MS.gene90362	0.84316	1.66E-58	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90362.t1	MTR_2g105060	95.327	321	6	5	1	317	1	316	0.0	614
MS.gene90362.t1	MTR_2g105060	96.341	246	2	3	74	317	1	241	1.01e-174	483
MS.gene90362.t1	MTR_4g007060	59.202	326	108	8	5	317	4	317	1.95e-105	311
MS.gene90362.t1	MTR_4g007060	57.491	287	102	6	44	317	4	283	5.14e-88	265
MS.gene90362.t1	MTR_1g013760	46.996	283	126	7	41	314	9	276	1.28e-71	223
MS.gene90362.t1	MTR_3g106060	45.818	275	116	7	56	314	29	286	1.26e-68	216
MS.gene90362.t1	MTR_4g007060	62.559	211	70	5	1	211	1	202	3.71e-68	213
MS.gene90362.t1	MTR_1g013790	36.940	268	133	7	51	316	6	239	8.55e-40	140
MS.gene90362.t1	MTR_7g110720	27.900	319	145	8	57	310	100	398	4.77e-30	118
MS.gene90362.t1	MTR_7g110720	28.571	308	130	9	57	310	100	371	7.06e-29	115
MS.gene90362.t1	MTR_4g132430	30.804	224	112	5	49	236	110	326	7.62e-28	113
MS.gene90362.t1	MTR_2g023930	33.333	237	94	8	49	231	139	365	2.52e-26	109
MS.gene90362.t1	MTR_3g053330	30.435	230	111	6	47	231	86	311	6.32e-24	101
MS.gene90362.t1	MTR_4g094412	54.321	81	32	2	151	231	228	303	8.98e-24	101
MS.gene90362.t1	MTR_4g094412	54.321	81	32	2	151	231	219	294	9.33e-24	101
MS.gene90362.t1	MTR_2g045360	31.203	266	124	8	55	275	70	321	2.12e-23	100
MS.gene90362.t1	MTR_4g107970	52.500	80	36	1	152	231	161	238	7.21e-23	99.0
MS.gene90362.t1	MTR_7g009730	48.810	84	41	1	146	229	196	277	1.01e-22	99.0
MS.gene90362.t1	MTR_4g107970	52.500	80	36	1	152	231	238	315	1.06e-22	99.0
MS.gene90362.t1	MTR_7g109800	51.852	81	36	2	151	231	127	204	2.10e-22	95.1
MS.gene90362.t1	MTR_1g086790	55.844	77	31	2	156	232	145	218	2.29e-22	95.9
MS.gene90362.t1	MTR_3g104750	40.000	120	60	4	112	229	52	161	4.52e-22	91.3
MS.gene90362.t1	MTR_4g132430	48.315	89	41	2	148	236	109	192	5.16e-22	95.1
MS.gene90362.t1	MTR_2g033820	54.321	81	34	2	156	236	190	267	7.11e-22	95.1
MS.gene90362.t1	MTR_4g094588	51.948	77	34	2	156	232	165	238	2.54e-21	93.2
MS.gene90362.t1	MTR_7g079010	53.846	78	33	2	152	229	124	198	4.37e-21	90.1
MS.gene90362.t1	MTR_4g049760	48.718	78	38	1	155	232	276	351	5.03e-21	94.0
MS.gene90362.t1	MTR_2g088000	31.452	248	88	9	56	231	172	409	1.23e-20	92.8
MS.gene90362.t1	MTR_4g007060	50.794	126	59	2	44	169	4	126	3.98e-20	86.3
MS.gene90362.t1	MTR_5g094430	57.812	64	26	1	169	232	228	290	6.45e-20	89.7
MS.gene90362.t1	MTR_5g094430	47.761	67	30	3	172	238	67	128	8.63e-12	65.9
MS.gene90362.t1	MTR_5g094430	57.812	64	26	1	169	232	250	312	7.15e-20	89.7
MS.gene90362.t1	MTR_5g094430	47.761	67	30	3	172	238	89	150	8.29e-12	65.9
MS.gene90362.t1	MTR_5g094430	57.812	64	26	1	169	232	362	424	7.40e-20	90.5
MS.gene90362.t1	MTR_5g094430	47.761	67	30	3	172	238	201	262	9.01e-12	66.2
MS.gene90362.t1	MTR_4g049790	34.286	140	59	3	155	263	298	435	9.03e-20	90.1
MS.gene90362.t1	MTR_5g091390	51.948	77	34	2	156	232	144	217	9.17e-20	88.2
MS.gene90362.t1	MTR_4g013260	40.909	110	49	2	122	231	302	395	9.70e-20	89.7
MS.gene90362.t1	MTR_4g013260	50.769	65	31	1	171	235	184	247	2.72e-16	79.7
MS.gene90362.t1	MTR_7g100510	52.857	70	32	1	162	231	352	420	1.10e-19	89.4
MS.gene90362.t1	MTR_7g100510	55.000	60	25	2	172	231	190	247	7.26e-15	75.1
MS.gene90362.t1	MTR_3g056100	57.812	64	26	1	169	232	256	318	1.21e-19	89.4
MS.gene90362.t1	MTR_3g056100	50.000	60	28	2	172	231	100	157	1.03e-11	65.9
MS.gene90362.t1	MTR_3g056100	57.812	64	26	1	169	232	269	331	1.37e-19	89.4
MS.gene90362.t1	MTR_3g056100	50.000	60	28	2	172	231	100	157	1.07e-11	65.9
MS.gene90362.t1	MTR_5g042920	54.688	64	28	1	169	232	318	380	1.49e-19	89.0
MS.gene90362.t1	MTR_5g042920	46.753	77	31	4	172	246	152	220	4.70e-13	69.7
MS.gene90362.t1	MTR_3g056100	57.812	64	26	1	169	232	400	462	1.51e-19	89.4
MS.gene90362.t1	MTR_3g056100	50.000	60	28	2	172	231	244	301	1.13e-11	65.9
MS.gene90362.t1	MTR_3g056100	57.812	64	26	1	169	232	413	475	1.52e-19	89.4
MS.gene90362.t1	MTR_3g056100	50.000	60	28	2	172	231	244	301	1.10e-11	65.9
MS.gene90362.t1	MTR_4g082580	42.056	107	46	3	137	243	259	349	1.55e-19	88.6
MS.gene90362.t1	MTR_4g082580	47.059	68	35	1	172	239	146	212	5.95e-13	69.3
MS.gene90362.t1	MTR_7g080000	42.478	113	61	3	121	232	383	492	3.23e-19	88.6
MS.gene90362.t1	MTR_7g080000	48.387	62	30	2	170	231	233	292	5.92e-11	63.5
MS.gene90362.t1	MTR_1g015140	50.667	75	34	2	156	230	89	160	4.07e-19	83.2
MS.gene90362.t1	MTR_5g043880	52.055	73	32	2	156	228	111	180	7.51e-19	85.1
MS.gene90362.t1	MTR_3g009470	41.667	96	40	2	137	232	476	555	7.60e-19	87.4
MS.gene90362.t1	MTR_3g009470	50.820	61	28	2	171	231	280	338	1.76e-12	68.6
MS.gene90362.t1	MTR_5g016610	40.385	104	55	2	125	228	160	256	9.02e-19	84.7
MS.gene90362.t1	MTR_7g011820	56.667	60	25	1	169	228	408	466	1.07e-18	86.7
MS.gene90362.t1	MTR_7g011820	44.578	83	42	3	172	252	229	309	3.90e-12	67.0
MS.gene90362.t1	MTR_8g092140	49.315	73	35	2	156	228	146	216	1.08e-18	84.0
MS.gene90362.t1	MTR_5g074400	40.741	108	48	3	125	232	389	480	1.13e-18	87.0
MS.gene90362.t1	MTR_5g074400	49.206	63	30	2	172	234	244	304	6.92e-14	72.4
MS.gene90362.t1	MTR_7g071120	35.075	134	64	4	126	252	294	411	1.19e-18	86.7
MS.gene90362.t1	MTR_7g071120	47.143	70	35	2	171	240	166	233	1.61e-14	74.3
MS.gene90362.t1	MTR_7g080020	44.545	110	54	4	126	232	448	553	1.67e-18	86.7
MS.gene90362.t1	MTR_7g080020	50.769	65	28	3	171	233	280	342	7.54e-12	66.6
MS.gene90362.t1	MTR_7g028415	37.302	126	65	3	115	229	28	150	2.61e-18	81.3
MS.gene90362.t1	MTR_7g028710	37.302	126	65	3	115	229	28	150	2.61e-18	81.3
MS.gene90362.t1	MTR_4g122530	50.649	77	35	2	155	231	194	267	3.51e-18	84.7
MS.gene90362.t1	MTR_1g009613	44.048	84	43	1	149	228	236	319	4.13e-18	84.0
MS.gene90362.t1	MTR_8g096730	43.590	78	43	1	169	246	68	144	5.10e-18	79.7
MS.gene90362.t1	MTR_1g077780	50.000	64	31	1	169	232	60	122	5.48e-18	79.7
MS.gene90362.t1	MTR_3g095040	30.570	193	110	6	88	273	30	205	5.81e-18	81.3
MS.gene90362.t1	MTR_3g031220	39.091	110	51	3	123	232	332	425	8.49e-18	84.0
MS.gene90362.t1	MTR_3g031220	51.667	60	27	2	172	231	199	256	3.69e-14	73.2
MS.gene90362.t1	MTR_4g094908	56.140	57	25	0	172	228	267	323	1.12e-17	82.8
MS.gene90362.t1	MTR_5g097490	50.000	78	36	2	155	232	238	312	1.55e-17	82.8
MS.gene90362.t1	MTR_3g095080	47.945	73	35	2	156	228	131	200	2.09e-17	80.1
MS.gene90362.t1	MTR_3g095080	47.945	73	35	2	156	228	155	224	2.31e-17	80.5
MS.gene90362.t1	MTR_8g007270	39.130	115	60	4	115	228	105	210	7.70e-17	78.6
MS.gene90362.t1	MTR_8g092010	47.368	76	37	2	156	231	95	167	8.92e-17	77.4
MS.gene90362.t1	MTR_2g032030	43.038	79	45	0	168	246	264	342	1.02e-16	80.9
MS.gene90362.t1	MTR_2g032030	42.857	77	44	0	168	244	264	340	1.04e-16	80.5
MS.gene90362.t1	MTR_1g070455	51.667	60	29	0	169	228	291	350	1.33e-16	79.7
MS.gene90362.t1	MTR_7g109600	35.238	105	65	1	135	239	20	121	1.46e-16	78.6
MS.gene90362.t1	MTR_4g127040	45.570	79	42	1	151	228	224	302	5.62e-16	77.4
MS.gene90362.t1	MTR_7g062220	45.333	75	30	2	172	236	125	198	7.29e-16	77.4
MS.gene90362.t1	MTR_8g087000	34.821	112	72	1	140	250	45	156	7.97e-16	75.9
MS.gene90362.t1	MTR_8g028565	37.895	95	53	2	172	266	156	244	1.48e-15	76.6
MS.gene90362.t1	MTR_8g087000	42.500	80	45	1	172	250	78	157	1.92e-15	75.1
MS.gene90362.t1	MTR_8g098945	45.161	62	34	0	172	233	130	191	2.18e-15	75.1
MS.gene90362.t1	MTR_3g108960	32.727	110	57	2	124	228	274	371	4.70e-15	75.5
MS.gene90362.t1	MTR_0117s0040	45.455	66	36	0	163	228	66	131	8.72e-15	73.2
MS.gene90362.t1	MTR_7g079040	43.077	65	37	0	169	233	152	216	1.00e-14	73.9
MS.gene90362.t1	MTR_4g130900	43.836	73	40	1	159	231	347	418	1.18e-14	74.7
MS.gene90362.t1	MTR_3g031220	51.667	60	27	2	172	231	199	256	2.04e-14	73.6
MS.gene90362.t1	MTR_4g047580	37.179	78	47	1	155	232	267	342	3.15e-14	73.6
MS.gene90362.t1	MTR_2g016770	43.333	60	34	0	172	231	36	95	6.98e-14	70.1
MS.gene90362.t1	MTR_2g016770	43.333	60	34	0	172	231	28	87	9.15e-14	69.7
MS.gene90362.t1	MTR_2g024350	45.161	62	34	0	171	232	8	69	9.59e-14	69.7
MS.gene90362.t1	MTR_1g078260	44.595	74	37	3	156	228	234	304	1.23e-13	71.6
MS.gene90362.t1	MTR_2g083870	36.364	110	66	2	125	231	32	140	1.60e-13	69.7
MS.gene90362.t1	MTR_6g086555	39.506	81	45	3	156	235	193	270	2.11e-13	70.9
MS.gene90362.t1	MTR_2g024380	46.774	62	33	0	171	232	251	312	2.24e-13	70.9
MS.gene90362.t1	MTR_1g099600	43.548	62	35	0	172	233	186	247	6.04e-13	68.6
MS.gene90362.t1	MTR_5g074200	41.791	67	37	2	172	238	221	285	9.67e-13	68.2
MS.gene90362.t1	MTR_3g009470	35.652	115	46	4	171	285	280	366	1.48e-12	68.6
MS.gene90362.t1	MTR_5g097500	38.667	75	45	1	158	232	217	290	2.86e-12	66.6
MS.gene90362.t1	MTR_2g075610	42.029	69	38	1	161	227	19	87	3.23e-12	64.7
MS.gene90362.t1	MTR_8g099350	48.529	68	31	2	163	226	122	189	6.27e-12	65.9
MS.gene90362.t1	MTR_2g075750	41.176	68	38	1	161	226	18	85	9.58e-12	63.2
MS.gene90362.t1	MTR_8g067650	44.444	72	35	1	169	240	337	403	1.17e-11	65.9
MS.gene90362.t1	MTR_8g067635	44.444	72	35	1	169	240	347	413	1.30e-11	65.5
MS.gene90362.t1	MTR_5g067680	33.333	117	68	4	120	226	143	259	3.01e-11	63.9
MS.gene90362.t1	MTR_8g069935	42.623	61	35	0	171	231	331	391	7.39e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene90362.t1	AT1G80840	53.474	331	107	12	1	317	1	298	2.79e-99	295
MS.gene90362.t1	AT4G31800	45.238	336	135	10	1	316	1	307	1.31e-79	244
MS.gene90362.t1	AT4G31800	47.328	262	99	7	74	316	1	242	1.73e-68	214
MS.gene90362.t1	AT2G25000	45.283	265	95	7	57	314	2	223	1.25e-63	201
MS.gene90362.t1	AT2G25000	45.283	265	95	7	57	314	2	223	1.25e-63	201
MS.gene90362.t1	AT2G25000	44.364	275	103	7	49	316	37	268	1.45e-63	202
MS.gene90362.t1	AT2G25000	43.599	289	110	8	33	314	3	245	4.01e-63	200
MS.gene90362.t1	AT4G31800	46.053	228	88	8	1	208	1	213	1.41e-49	165
MS.gene90362.t1	AT5G41570	47.872	94	45	3	136	229	66	155	3.92e-23	94.4
MS.gene90362.t1	AT4G01720	25.143	350	152	8	60	310	105	443	4.06e-23	99.8
MS.gene90362.t1	AT4G04450	40.187	107	55	1	125	231	161	258	5.09e-23	99.0
MS.gene90362.t1	AT1G68150	53.086	81	33	2	151	231	220	295	6.84e-23	97.8
MS.gene90362.t1	AT4G18170	46.535	101	50	3	133	232	135	232	8.90e-23	96.7
MS.gene90362.t1	AT4G22070	51.190	84	36	2	148	231	279	357	1.00e-22	99.0
MS.gene90362.t1	AT4G22070	51.190	84	36	2	148	231	279	357	1.00e-22	99.0
MS.gene90362.t1	AT4G22070	51.190	84	36	2	148	231	279	357	1.00e-22	99.0
MS.gene90362.t1	AT4G22070	51.190	84	36	2	148	231	279	357	1.00e-22	99.0
MS.gene90362.t1	AT1G64000	51.316	76	34	2	154	229	99	171	1.17e-22	93.6
MS.gene90362.t1	AT1G29860	53.659	82	35	2	156	237	123	201	1.53e-22	95.5
MS.gene90362.t1	AT4G04450	40.187	107	55	1	125	231	255	352	1.65e-22	98.2
MS.gene90362.t1	AT1G62300	51.190	84	36	2	148	231	294	372	2.42e-22	97.8
MS.gene90362.t1	AT5G15130	39.655	116	54	3	121	231	141	245	6.57e-22	96.3
MS.gene90362.t1	AT5G15130	39.655	116	54	3	121	231	183	287	6.95e-22	96.3
MS.gene90362.t1	AT4G26640	31.527	203	121	5	113	310	144	333	1.07e-21	94.7
MS.gene90362.t1	AT4G26640	45.070	71	37	2	161	231	25	93	1.98e-12	67.8
MS.gene90362.t1	AT4G26640	31.527	203	121	5	113	310	144	333	1.07e-21	94.7
MS.gene90362.t1	AT4G26640	45.070	71	37	2	161	231	25	93	1.98e-12	67.8
MS.gene90362.t1	AT4G26640	31.527	203	121	5	113	310	144	333	1.07e-21	94.7
MS.gene90362.t1	AT4G26640	45.070	71	37	2	161	231	25	93	1.98e-12	67.8
MS.gene90362.t1	AT4G26640	31.527	203	121	5	113	310	144	333	1.07e-21	94.7
MS.gene90362.t1	AT4G26640	45.070	71	37	2	161	231	25	93	1.98e-12	67.8
MS.gene90362.t1	AT1G18860	59.677	62	25	0	170	231	238	299	1.14e-21	95.5
MS.gene90362.t1	AT4G26640	31.527	203	121	5	113	310	248	437	2.48e-21	94.4
MS.gene90362.t1	AT4G26640	45.070	71	37	2	161	231	129	197	2.17e-12	67.8
MS.gene90362.t1	AT4G26640	31.527	203	121	5	113	310	280	469	3.38e-21	94.4
MS.gene90362.t1	AT4G26640	45.070	71	37	2	161	231	161	229	2.29e-12	67.8
MS.gene90362.t1	AT5G49520	53.247	77	33	2	155	231	207	280	3.53e-21	93.6
MS.gene90362.t1	AT5G07100	33.987	153	80	4	85	232	65	201	3.54e-21	90.1
MS.gene90362.t1	AT5G07100	45.455	77	41	1	159	235	12	87	2.79e-16	76.6
MS.gene90362.t1	AT5G07100	33.987	153	80	4	85	232	65	201	3.54e-21	90.1
MS.gene90362.t1	AT5G07100	45.455	77	41	1	159	235	12	87	2.79e-16	76.6
MS.gene90362.t1	AT5G07100	33.987	153	80	4	85	232	65	201	3.54e-21	90.1
MS.gene90362.t1	AT5G07100	45.455	77	41	1	159	235	12	87	2.79e-16	76.6
MS.gene90362.t1	AT5G07100	33.987	153	80	4	85	232	65	201	3.54e-21	90.1
MS.gene90362.t1	AT5G07100	45.455	77	41	1	159	235	12	87	2.79e-16	76.6
MS.gene90362.t1	AT4G26640	31.527	203	121	5	113	310	320	509	3.86e-21	94.4
MS.gene90362.t1	AT4G26640	45.070	71	37	2	161	231	201	269	2.31e-12	67.8
MS.gene90362.t1	AT2G47260	50.000	86	40	2	151	236	156	238	6.03e-21	92.0
MS.gene90362.t1	AT5G07100	33.987	153	80	4	85	232	158	294	8.84e-21	91.3
MS.gene90362.t1	AT5G07100	45.455	77	41	1	159	235	105	180	9.61e-16	77.0
MS.gene90362.t1	AT3G62340	51.163	86	39	2	151	236	100	182	1.11e-20	90.1
MS.gene90362.t1	AT5G26170	53.425	73	31	2	156	228	100	169	1.26e-20	87.8
MS.gene90362.t1	AT2G21900	45.000	100	47	3	134	232	77	169	1.41e-20	88.2
MS.gene90362.t1	AT1G13960	34.694	147	68	3	101	247	366	484	2.65e-20	91.7
MS.gene90362.t1	AT1G13960	49.254	67	32	2	172	238	230	294	3.02e-13	70.5
MS.gene90362.t1	AT1G69310	51.282	78	35	2	151	228	129	203	2.90e-20	89.4
MS.gene90362.t1	AT1G69310	51.282	78	35	2	151	228	129	203	2.90e-20	89.4
MS.gene90362.t1	AT1G69310	51.282	78	35	2	151	228	129	203	2.90e-20	89.4
MS.gene90362.t1	AT1G13960	34.694	147	68	3	101	247	213	331	4.73e-20	89.7
MS.gene90362.t1	AT1G13960	49.254	67	32	2	172	238	77	141	3.40e-13	69.7
MS.gene90362.t1	AT5G46350	39.683	126	55	6	156	280	170	275	6.06e-20	89.0
MS.gene90362.t1	AT5G56270	44.000	100	40	3	133	232	464	547	8.92e-20	90.5
MS.gene90362.t1	AT5G56270	46.053	76	35	3	170	245	272	341	8.96e-13	69.3
MS.gene90362.t1	AT2G03340	56.250	64	27	1	169	232	413	475	1.19e-19	89.7
MS.gene90362.t1	AT2G03340	45.833	72	37	2	172	243	251	320	5.78e-14	72.8
MS.gene90362.t1	AT1G55600	50.000	80	37	2	152	231	290	366	1.80e-19	89.0
MS.gene90362.t1	AT5G13080	48.750	80	38	2	156	235	54	130	2.38e-19	83.2
MS.gene90362.t1	AT3G01080	55.556	63	27	1	169	231	342	403	1.55e-18	86.3
MS.gene90362.t1	AT3G01080	41.333	75	42	2	172	246	206	278	6.67e-11	63.2
MS.gene90362.t1	AT1G69810	29.365	252	113	8	43	231	15	264	1.64e-18	85.5
MS.gene90362.t1	AT3G01080	55.556	63	27	1	169	231	304	365	1.75e-18	85.9
MS.gene90362.t1	AT3G01080	50.000	60	28	2	172	231	168	225	8.24e-11	62.8
MS.gene90362.t1	AT5G52830	43.182	88	50	0	172	259	166	253	2.30e-18	84.7
MS.gene90362.t1	AT5G64810	37.931	116	67	3	113	228	56	166	4.48e-18	81.3
MS.gene90362.t1	AT2G30250	48.276	87	42	2	146	232	305	388	4.48e-18	84.3
MS.gene90362.t1	AT2G30250	36.538	104	51	4	172	262	167	268	6.96e-13	68.9
MS.gene90362.t1	AT3G01970	50.000	74	34	2	155	228	51	121	8.41e-18	79.3
MS.gene90362.t1	AT2G46130	49.367	79	37	2	151	229	12	87	9.23e-18	77.8
MS.gene90362.t1	AT2G23320	39.683	126	62	4	103	228	186	297	9.77e-18	82.8
MS.gene90362.t1	AT1G69810	48.750	80	38	2	153	231	129	206	1.16e-17	82.4
MS.gene90362.t1	AT4G39410	45.783	83	42	2	146	228	200	279	1.19e-17	82.4
MS.gene90362.t1	AT2G04880	50.704	71	34	1	169	239	305	374	1.27e-17	83.6
MS.gene90362.t1	AT2G04880	39.744	78	44	3	169	245	109	184	2.02e-12	68.2
MS.gene90362.t1	AT2G04880	50.704	71	34	1	169	239	281	350	1.37e-17	83.6
MS.gene90362.t1	AT2G04880	39.744	78	44	3	169	245	109	184	2.02e-12	67.8
MS.gene90362.t1	AT2G38470	53.125	64	29	1	169	232	360	422	3.67e-17	82.4
MS.gene90362.t1	AT2G38470	52.459	61	27	2	171	231	184	242	1.93e-14	74.3
MS.gene90362.t1	AT2G30590	51.515	66	31	1	169	233	311	376	3.67e-17	81.6
MS.gene90362.t1	AT2G44745	38.655	119	68	4	120	236	95	210	4.17e-17	79.0
MS.gene90362.t1	AT4G31550	51.667	60	29	0	169	228	243	302	4.22e-17	80.9
MS.gene90362.t1	AT4G31550	51.667	60	29	0	169	228	244	303	4.39e-17	80.9
MS.gene90362.t1	AT4G26440	54.688	64	28	1	169	232	370	432	4.96e-17	82.0
MS.gene90362.t1	AT4G26440	35.185	108	59	4	172	279	179	275	1.02e-11	65.9
MS.gene90362.t1	AT1G29280	50.000	60	30	0	172	231	75	134	5.54e-17	79.7
MS.gene90362.t1	AT2G34830	35.043	117	70	1	123	233	161	277	6.63e-17	81.3
MS.gene90362.t1	AT2G34830	35.043	117	70	1	123	233	170	286	7.98e-17	80.9
MS.gene90362.t1	AT5G43290	42.857	84	46	2	145	228	89	170	8.77e-17	79.3
MS.gene90362.t1	AT3G04670	51.667	60	29	0	169	228	260	319	2.54e-16	79.0
MS.gene90362.t1	AT4G01250	35.714	98	63	0	172	269	129	226	2.58e-16	78.2
MS.gene90362.t1	AT1G69310	50.000	78	32	3	151	228	129	199	2.67e-16	78.2
MS.gene90362.t1	AT4G24240	44.304	79	43	1	151	228	260	338	3.33e-16	78.6
MS.gene90362.t1	AT2G37260	37.500	120	64	3	113	228	213	325	6.61e-16	77.8
MS.gene90362.t1	AT2G37260	46.667	75	38	2	158	232	72	144	4.91e-14	72.4
MS.gene90362.t1	AT2G37260	37.500	120	64	3	113	228	211	323	6.77e-16	77.8
MS.gene90362.t1	AT2G37260	46.667	75	38	2	158	232	70	142	5.03e-14	72.4
MS.gene90362.t1	AT5G28650	51.667	60	29	0	169	228	260	319	6.82e-16	77.4
MS.gene90362.t1	AT1G30650	45.714	70	38	0	164	233	210	279	7.52e-16	78.2
MS.gene90362.t1	AT2G37260	37.037	135	69	4	113	238	293	420	9.92e-16	77.8
MS.gene90362.t1	AT2G37260	46.667	75	38	2	158	232	152	224	5.43e-14	72.4
MS.gene90362.t1	AT2G24570	50.000	60	30	0	169	228	241	300	1.14e-15	76.6
MS.gene90362.t1	AT3G58710	40.323	124	64	3	129	245	24	144	2.21e-15	75.5
MS.gene90362.t1	AT4G23550	31.507	146	88	4	169	314	138	271	2.33e-15	75.9
MS.gene90362.t1	AT3G58710	40.000	125	64	3	129	245	24	145	3.17e-15	74.7
MS.gene90362.t1	AT4G30935	42.466	73	41	1	159	231	319	390	5.84e-15	75.5
MS.gene90362.t1	AT5G45050	35.833	120	68	2	172	282	1153	1272	1.36e-14	75.1
MS.gene90362.t1	AT5G45050	35.833	120	68	2	172	282	1181	1300	1.38e-14	75.1
MS.gene90362.t1	AT5G45050	47.541	61	32	0	172	232	1042	1102	1.48e-14	75.1
MS.gene90362.t1	AT2G46130	48.101	79	34	3	151	229	12	83	6.93e-14	67.4
MS.gene90362.t1	AT2G46400	41.096	73	39	2	156	226	91	161	7.06e-12	65.5
MS.gene90362.t1	AT5G45260	37.975	79	47	1	172	248	1209	1287	1.39e-11	65.9
MS.gene90362.t1	AT3G01080	41.333	75	42	2	172	246	206	278	4.36e-11	63.5

Find 0 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAACAATTTTTTCTCATTA+GGG	+	15084:31307-31326	MS.gene90362:CDS	15.0%
!!	TTATGAATACTAGATATATG+AGG	+	15084:31400-31419	MS.gene90362:intron	20.0%
!!	TTTATCATCATATTCTTAGA+AGG	-	15084:32232-32251	None:intergenic	20.0%
!!!	GAAAACAATTTTTTCTCATT+AGG	+	15084:31306-31325	MS.gene90362:CDS	20.0%
!	AATAGTAGAAACTTGCATTA+AGG	+	15084:31749-31768	MS.gene90362:CDS	25.0%
!	GAAGAAAAATGAATCTTACA+AGG	-	15084:31821-31840	None:intergenic	25.0%
!	GATGATAAATAATCCCAAAA+TGG	+	15084:32243-32262	MS.gene90362:CDS	25.0%
!!	TACTAGATATATGAGGTTTT+TGG	+	15084:31407-31426	MS.gene90362:intron	25.0%
!!	TATTTTCAGATTGTGAAAGA+TGG	+	15084:31917-31936	MS.gene90362:intron	25.0%
	AAAGAAGAGGTAAGTTAGTT+TGG	+	15084:31348-31367	MS.gene90362:intron	30.0%
	AGTCATACAACCTAATGAAA+TGG	-	15084:31861-31880	None:intergenic	30.0%
	ATTTGCAAAGCCATTTCATT+AGG	+	15084:31848-31867	MS.gene90362:intron	30.0%
	TATATCTTCTGCAAAAGAAG+AGG	+	15084:31335-31354	MS.gene90362:CDS	30.0%
!	GATTGATATTTTCAGTCAAG+TGG	+	15084:31459-31478	MS.gene90362:intron	30.0%
!	GTAAGTTAGTTTGGTTACTT+TGG	+	15084:31357-31376	MS.gene90362:intron	30.0%
!	GTGTAACATTTTTCCTGATA+TGG	-	15084:32347-32366	None:intergenic	30.0%
	AAGCAGCAGTAACAATCTAA+TGG	+	15084:31656-31675	MS.gene90362:CDS	35.0%
	AAGGTTCTACTGGACTAATT+TGG	-	15084:32153-32172	None:intergenic	35.0%
	AATATGGACAAAAGGTGACA+AGG	+	15084:31954-31973	MS.gene90362:CDS	35.0%
	AGCAGCAGTAACAATCTAAT+GGG	+	15084:31657-31676	MS.gene90362:CDS	35.0%
	ATATGGACAAAAGGTGACAA+GGG	+	15084:31955-31974	MS.gene90362:CDS	35.0%
	ATCAATCATGCAAGAAACCA+AGG	+	15084:31724-31743	MS.gene90362:CDS	35.0%
	ATTGTGGTTGCAACATATGA+AGG	+	15084:32070-32089	MS.gene90362:CDS	35.0%
	CAAGTACAGTTACACTTGAT+TGG	+	15084:32182-32201	MS.gene90362:CDS	35.0%
	CAAGTTTCTACTATTTGCCT+TGG	-	15084:31744-31763	None:intergenic	35.0%
	CAATCAAGTGTAACTGTACT+TGG	-	15084:32184-32203	None:intergenic	35.0%
	CACATTGAGAAACAATCTGA+TGG	+	15084:31566-31585	MS.gene90362:CDS	35.0%
	CATCATATTCTTAGAAGGTG+CGG	-	15084:32227-32246	None:intergenic	35.0%
	GAGAAAGAATCCTGATCATA+AGG	+	15084:31596-31615	MS.gene90362:CDS	35.0%
	GGATATCAGTGGAGAAAATA+TGG	+	15084:31938-31957	MS.gene90362:CDS	35.0%
	GTGGAGAAAATATGGACAAA+AGG	+	15084:31946-31965	MS.gene90362:CDS	35.0%
	TATGTTGCAACCACAATTGA+TGG	-	15084:32067-32086	None:intergenic	35.0%
	TCATACTTCTTGAAGCTTAC+AGG	-	15084:31282-31301	None:intergenic	35.0%
	TGGATTAATGTTGAGATCCA+AGG	-	15084:31235-31254	None:intergenic	35.0%
	TTCCTACAACGATTGTTTGT+CGG	-	15084:32130-32149	None:intergenic	35.0%
	TTGTGAAAGATGGATATCAG+TGG	+	15084:31927-31946	MS.gene90362:CDS	35.0%
!	AATCTGTGGTACTTCCATTT+TGG	-	15084:32260-32279	None:intergenic	35.0%
!	ATCATGGATTAACACTTCCT+TGG	+	15084:31215-31234	MS.gene90362:CDS	35.0%
!	ATCTGTGGTACTTCCATTTT+GGG	-	15084:32259-32278	None:intergenic	35.0%
!	TGTAAGCTTCAAGAAGTATG+AGG	+	15084:31281-31300	MS.gene90362:CDS	35.0%
!!	TCAGATTTCCTTTTCTGAGA+TGG	-	15084:31630-31649	None:intergenic	35.0%
!!!	AATGGAAGTACCACAGATTT+TGG	+	15084:32261-32280	MS.gene90362:CDS	35.0%
!!!	CAGATTTCCTTTTCTGAGAT+GGG	-	15084:31629-31648	None:intergenic	35.0%
	AATCTAATGGGAGGAGTAAC+TGG	+	15084:31669-31688	MS.gene90362:CDS	40.0%
	AGCAGTAACAATCTAATGGG+AGG	+	15084:31660-31679	MS.gene90362:CDS	40.0%
	ATCTGTTCCACCAAAATCTG+TGG	-	15084:32274-32293	None:intergenic	40.0%
	CAACATTAATCCACGCAGTA+GGG	+	15084:31242-31261	MS.gene90362:CDS	40.0%
	GCAGAAAACAAGAAGTTGAC+AGG	+	15084:31513-31532	MS.gene90362:CDS	40.0%
	TACTTCTTGAAGCTTACAGG+AGG	-	15084:31279-31298	None:intergenic	40.0%
	TCAACATTAATCCACGCAGT+AGG	+	15084:31241-31260	MS.gene90362:CDS	40.0%
	TCATCCTCATCCTTCTCAAA+CGG	+	15084:32102-32121	MS.gene90362:CDS	40.0%
	TGTGGATGATCCATCAATTG+TGG	+	15084:32054-32073	MS.gene90362:CDS	40.0%
	TTGAAGTATGCTCTTGGAGA+TGG	-	15084:31986-32005	None:intergenic	40.0%
!	AAGCTTCAAGAAGTATGAGG+TGG	+	15084:31284-31303	MS.gene90362:CDS	40.0%
!	GAGCATTTGAAGTATGCTCT+TGG	-	15084:31992-32011	None:intergenic	40.0%
!!	ACAGATTTTGGTGGAACAGA+TGG	+	15084:32273-32292	MS.gene90362:CDS	40.0%
!!	TGCTCTGAAGTTAAGATCCT+TGG	-	15084:32311-32330	None:intergenic	40.0%
	AAGCTGCACAGTGAAGAAGA+AGG	+	15084:32021-32040	MS.gene90362:CDS	45.0%
	AGCAAAGCCCATCTCAGAAA+AGG	+	15084:31619-31638	MS.gene90362:CDS	45.0%
	AGCCGACAAACAATCGTTGT+AGG	+	15084:32125-32144	MS.gene90362:CDS	45.0%
	GATGGCTACTTCATTGACCA+AGG	+	15084:32291-32310	MS.gene90362:CDS	45.0%
	TTCTTCTTCACTGTGCAGCT+TGG	-	15084:32022-32041	None:intergenic	45.0%
!	GAAGAAGGTGCAAAGAAGTG+TGG	+	15084:32036-32055	MS.gene90362:CDS	45.0%
!	TTCTTAGAAGGTGCGGAAGA+AGG	-	15084:32220-32239	None:intergenic	45.0%
!	TTTTCAGTCAAGTGGTGCCT+TGG	+	15084:31467-31486	MS.gene90362:intron	45.0%
!!	ACTGTACTTGGTGCAGAAGA+AGG	-	15084:32172-32191	None:intergenic	45.0%
!!!	GGAAGTACCACAGATTTTGG+TGG	+	15084:32264-32283	MS.gene90362:CDS	45.0%
	GGGCTTTGCTCCTTATGATC+AGG	-	15084:31609-31628	None:intergenic	50.0%
	GGTGCAGAAGAAGGTTCTAC+TGG	-	15084:32163-32182	None:intergenic	50.0%
	TGTTCATGAACCCTACTGCG+TGG	-	15084:31255-31274	None:intergenic	50.0%
!!	TTTGTCGGCTCCGTTTGAGA+AGG	-	15084:32115-32134	None:intergenic	50.0%
	GGCTCCGTTTGAGAAGGATG+AGG	-	15084:32109-32128	None:intergenic	55.0%
	TCAGTCAAGTGGTGCCTTGG+TGG	+	15084:31470-31489	MS.gene90362:intron	55.0%
	TCGTTTCAGCTCCTCCACCA+AGG	-	15084:31487-31506	None:intergenic	55.0%
!	GCACTTGCTGCTGCCATATC+AGG	+	15084:32331-32350	MS.gene90362:CDS	55.0%
	GTCAAGTGGTGCCTTGGTGG+AGG	+	15084:31473-31492	MS.gene90362:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
15084	gene	31201	32375	31201	ID=MS.gene90362
15084	mRNA	31201	32375	31201	ID=MS.gene90362.t1;Parent=MS.gene90362
15084	exon	31201	31356	31201	ID=MS.gene90362.t1.exon1;Parent=MS.gene90362.t1
15084	CDS	31201	31356	31201	ID=cds.MS.gene90362.t1;Parent=MS.gene90362.t1
15084	exon	31474	31821	31474	ID=MS.gene90362.t1.exon2;Parent=MS.gene90362.t1
15084	CDS	31474	31821	31474	ID=cds.MS.gene90362.t1;Parent=MS.gene90362.t1
15084	exon	31926	32375	31926	ID=MS.gene90362.t1.exon3;Parent=MS.gene90362.t1
15084	CDS	31926	32375	31926	ID=cds.MS.gene90362.t1;Parent=MS.gene90362.t1

Gene Sequence

>MS.gene90362

ATGGATTTTTCATCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCCACGCAGTAGGGTTCATGAACAACCTCCTGTAAGCTTCAAGAAGTATGAGGTGGAAAACAATTTTTTCTCATTAGGGATGAGTATATCTTCTGCAAAAGAAGAGGTAAGTTAGTTTGGTTACTTTGGTTTTCTTATTAGTCAGTACATTATGAATACTAGATATATGAGGTTTTTGGTTTTTACTAATTAAAGTTGCATGAATATTGATTGATATTTTCAGTCAAGTGGTGCCTTGGTGGAGGAGCTGAAACGAGTGAGTGCAGAAAACAAGAAGTTGACAGGAATGTTGACTGAGATGTGTGAGAATTACAACACATTGAGAAACAATCTGATGGAATATATGAGAAAGAATCCTGATCATAAGGAGCAAAGCCCATCTCAGAAAAGGAAATCTGATGAAATAAGCAGCAGTAACAATCTAATGGGAGGAGTAACTGGAAACAACTCTGAGAGCAGTTCAAGTGATGAAGATCAATCATGCAAGAAACCAAGGCAAATAGTAGAAACTTGCATTAAGGCTAAAGTTTCAAGAGTTTATTTCAAGACAGAATCATCTGATTCAAGCCTTGTAAGATTCATTTTTCTTCATTATTAATTTGCAAAGCCATTTCATTAGGTTGTATGACTTGTAAGTGATTTTGTTTGACATTTTTTGTGTTAATTTATTTTCAGATTGTGAAAGATGGATATCAGTGGAGAAAATATGGACAAAAGGTGACAAGGGATAATCCATCTCCAAGAGCATACTTCAAATGCTCATTTGCTCCAAGCTGCACAGTGAAGAAGAAGGTGCAAAGAAGTGTGGATGATCCATCAATTGTGGTTGCAACATATGAAGGAGAGCATAATCATCCTCATCCTTCTCAAACGGAGCCGACAAACAATCGTTGTAGGAACCAAATTAGTCCAGTAGAACCTTCTTCTGCACCAAGTACAGTTACACTTGATTGGACAAAGAAAGCACCTTCTTCCGCACCTTCTAAGAATATGATGATAAATAATCCCAAAATGGAAGTACCACAGATTTTGGTGGAACAGATGGCTACTTCATTGACCAAGGATCTTAACTTCAGAGCAGCACTTGCTGCTGCCATATCAGGAAAAATGTTACACCAAAATTAG

Protein sequence

>MS.gene90362.t1

MDFSSSWINTSLDLNINPRSRVHEQPPVSFKKYEVENNFFSLGMSISSAKEESSGALVEELKRVSAENKKLTGMLTEMCENYNTLRNNLMEYMRKNPDHKEQSPSQKRKSDEISSSNNLMGGVTGNNSESSSSDEDQSCKKPRQIVETCIKAKVSRVYFKTESSDSSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCTVKKKVQRSVDDPSIVVATYEGEHNHPHPSQTEPTNNRCRNQISPVEPSSAPSTVTLDWTKKAPSSAPSKNMMINNPKMEVPQILVEQMATSLTKDLNFRAALAAAISGKMLHQN