Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90606.t1 | XP_003616812.1 | 86.1 | 173 | 11 | 1 | 1 | 173 | 1 | 160 | 1.20E-21 | 113.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90606.t1 | Q09134 | 100.0 | 159 | 0 | 0 | 15 | 173 | 1 | 159 | 4.3e-20 | 99.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90606.t1 | G7K7E0 | 86.1 | 173 | 11 | 1 | 1 | 173 | 1 | 160 | 8.5e-22 | 113.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050076 | MS.gene90606 | 0.822638 | 2.13E-53 | -1.69E-46 |
| MS.gene050128 | MS.gene90606 | 0.809701 | 1.66E-50 | -1.69E-46 |
| MS.gene050404 | MS.gene90606 | 0.835162 | 1.97E-56 | -1.69E-46 |
| MS.gene050406 | MS.gene90606 | 0.810667 | 1.03E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene90606 | 0.804207 | 2.41E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene90606 | 0.810178 | 1.31E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene90606 | 0.809875 | 1.52E-50 | -1.69E-46 |
| MS.gene052178 | MS.gene90606 | 0.810942 | 8.97E-51 | -1.69E-46 |
| MS.gene052290 | MS.gene90606 | 0.840768 | 7.13E-58 | -1.69E-46 |
| MS.gene052340 | MS.gene90606 | 0.828487 | 8.75E-55 | -1.69E-46 |
| MS.gene053073 | MS.gene90606 | 0.818494 | 1.90E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene90606 | 0.803891 | 2.81E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene90606 | 0.840678 | 7.53E-58 | -1.69E-46 |
| MS.gene054327 | MS.gene90606 | 0.820306 | 7.36E-53 | -1.69E-46 |
| MS.gene055254 | MS.gene90606 | 0.828923 | 6.86E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene90606 | 0.815555 | 8.71E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene90606 | 0.851852 | 6.78E-61 | -1.69E-46 |
| MS.gene056612 | MS.gene90606 | 0.839137 | 1.90E-57 | -1.69E-46 |
| MS.gene056664 | MS.gene90606 | 0.811914 | 5.52E-51 | -1.69E-46 |
| MS.gene056719 | MS.gene90606 | 0.806884 | 6.62E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene90606 | 0.800403 | 1.46E-48 | -1.69E-46 |
| MS.gene059597 | MS.gene90606 | 0.813002 | 3.19E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene90606 | 0.803355 | 3.63E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene90606 | 0.88972 | 1.88E-73 | -1.69E-46 |
| MS.gene060005 | MS.gene90606 | 0.806868 | 6.68E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene90606 | 0.802487 | 5.48E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene90606 | 0.820652 | 6.13E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene90606 | 0.831222 | 1.89E-55 | -1.69E-46 |
| MS.gene061051 | MS.gene90606 | -0.800657 | 1.30E-48 | -1.69E-46 |
| MS.gene061112 | MS.gene90606 | 0.853319 | 2.59E-61 | -1.69E-46 |
| MS.gene061265 | MS.gene90606 | 0.848491 | 5.92E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90606.t1 | MTR_5g084570 | 96.000 | 50 | 2 | 0 | 1 | 50 | 1 | 50 | 1.37e-28 | 104 |
| MS.gene90606.t1 | MTR_5g084540 | 100.000 | 26 | 0 | 0 | 148 | 173 | 135 | 160 | 1.17e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 82 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTACATCTGATGCCAAAA+AGG | 0.239988 | 5.4:-66869215 | MS.gene90606:CDS |
| GTTGTAACCTCCACCATATT+TGG | 0.288132 | 5.4:+66869038 | None:intergenic |
| GAAGTAAACGATGCCAAATA+TGG | 0.342429 | 5.4:-66869051 | MS.gene90606:CDS |
| ACCTGCCATGGCAATGGTAT+TGG | 0.432416 | 5.4:+66868740 | None:intergenic |
| GAACCATAGCCAAGAGGCCT+AGG | 0.443599 | 5.4:+66869278 | None:intergenic |
| CATCCTAGGCCTCTTGGCTA+TGG | 0.447886 | 5.4:-66869281 | MS.gene90606:CDS |
| AATCCTCATCCTAGGCCTCT+TGG | 0.458683 | 5.4:-66869287 | MS.gene90606:CDS |
| GCCAATACCATTGCCATGGC+AGG | 0.481585 | 5.4:-66868741 | MS.gene90606:CDS |
| GGAGGTTTCAACCACGGTGG+TGG | 0.498158 | 5.4:-66868991 | MS.gene90606:CDS |
| AGTGTTGTCCTTAGCTTGCA+TGG | 0.498460 | 5.4:+66868693 | None:intergenic |
| GGTGGCTACAACCATGGTGG+AGG | 0.500815 | 5.4:-66868790 | MS.gene90606:CDS |
| GGTTTCAACCACGGTGGTGG+TGG | 0.502796 | 5.4:-66868988 | MS.gene90606:CDS |
| GGATACAACCACGGTGGTGG+TGG | 0.504414 | 5.4:-66868949 | MS.gene90606:CDS |
| GGTGGATACAACCACGGTGG+TGG | 0.511490 | 5.4:-66868952 | MS.gene90606:CDS |
| AGAAAAGCAATCCTCATCCT+AGG | 0.516305 | 5.4:-66869295 | MS.gene90606:CDS |
| GGATACAACAATGGTGGAGG+TGG | 0.518813 | 5.4:-66868886 | MS.gene90606:CDS |
| GGATACAACAATGGTGGAGG+TGG | 0.518813 | 5.4:-66868928 | MS.gene90606:CDS |
| GGAGGTTACAACCACGGCGG+TGG | 0.523190 | 5.4:-66869027 | MS.gene90606:CDS |
| GGCTACAACCATGGTGGAGG+CGG | 0.523424 | 5.4:-66868787 | MS.gene90606:CDS |
| GGCGGTTACAACCACGGTGG+AGG | 0.523588 | 5.4:-66868769 | MS.gene90606:CDS |
| GGATACAACCACGGTGGTGG+TGG | 0.524452 | 5.4:-66868865 | MS.gene90606:CDS |
| GGATACAACCACGGTGGTGG+TGG | 0.524452 | 5.4:-66868907 | MS.gene90606:CDS |
| TAGCCAAGAGGCCTAGGATG+AGG | 0.538496 | 5.4:+66869284 | None:intergenic |
| ATTTGTTGCCATGCAAGCTA+AGG | 0.539995 | 5.4:-66868701 | MS.gene90606:CDS |
| AATGGTGGTGGCTACAACCA+TGG | 0.544536 | 5.4:-66868796 | MS.gene90606:CDS |
| GGTTACAACCACGGCGGTGG+TGG | 0.544864 | 5.4:-66869024 | MS.gene90606:CDS |
| GGTGGTTACAACCATGGTGG+AGG | 0.545718 | 5.4:-66868826 | MS.gene90606:CDS |
| TTCCTCAGAAGTCTCAGCTA+GGG | 0.554700 | 5.4:-66869248 | MS.gene90606:CDS |
| GGTGGATACAACCACGGTGG+TGG | 0.558361 | 5.4:-66868868 | MS.gene90606:CDS |
| GGTGGATACAACCACGGTGG+TGG | 0.558361 | 5.4:-66868910 | MS.gene90606:CDS |
| CATGTGAGCAGCACCTGCCA+TGG | 0.559419 | 5.4:+66868728 | None:intergenic |
| TTTCCTCAGAAGTCTCAGCT+AGG | 0.560253 | 5.4:-66869249 | MS.gene90606:CDS |
| CATGGTGGAGGCGGTTACAA+TGG | 0.561614 | 5.4:-66868814 | MS.gene90606:CDS |
| GGATACAACAATGGTGGAGG+TGG | 0.564967 | 5.4:-66868844 | MS.gene90606:CDS |
| CACGGCGGTGGTGGTTACAA+TGG | 0.571191 | 5.4:-66869015 | MS.gene90606:CDS |
| GGTTACAACCACGGTGGAGG+CGG | 0.572554 | 5.4:-66868766 | MS.gene90606:CDS |
| AACGATGCCAAATATGGTGG+AGG | 0.573315 | 5.4:-66869045 | MS.gene90606:CDS |
| GGTGGAGGCGGTTACAATGG+TGG | 0.575813 | 5.4:-66868811 | MS.gene90606:CDS |
| GGTGGTGGTTACAATGGTGG+AGG | 0.578963 | 5.4:-66869009 | MS.gene90606:CDS |
| GGTTACAACCATGGTGGAGG+CGG | 0.580077 | 5.4:-66868823 | MS.gene90606:CDS |
| GGTGGATACAACAATGGCGG+TGG | 0.583166 | 5.4:-66868970 | MS.gene90606:CDS |
| GGCGGTGGTGGTTACAATGG+TGG | 0.594919 | 5.4:-66869012 | MS.gene90606:CDS |
| GGAGGCGGTTACAATGGTGG+TGG | 0.595339 | 5.4:-66868808 | MS.gene90606:CDS |
| GGTTGTAACCGCCTCCACCA+TGG | 0.597627 | 5.4:+66868779 | None:intergenic |
| GGTGGATACAACAATGGTGG+AGG | 0.598383 | 5.4:-66868847 | MS.gene90606:CDS |
| GGTGGATACAACAATGGTGG+AGG | 0.598383 | 5.4:-66868889 | MS.gene90606:CDS |
| GGTGGATACAACAATGGTGG+AGG | 0.598383 | 5.4:-66868931 | MS.gene90606:CDS |
| AGCAGCACCTGCCATGGCAA+TGG | 0.620983 | 5.4:+66868734 | None:intergenic |
| CATTGTAACCGCCTCCACCA+TGG | 0.638839 | 5.4:+66868815 | None:intergenic |
| GGTGGAGGCGGTTACAACCA+CGG | 0.641005 | 5.4:-66868775 | MS.gene90606:CDS |
| GGTTGCCAATACCATTGCCA+TGG | 0.642022 | 5.4:-66868745 | MS.gene90606:CDS |
| GTCCCTAGCTGAGACTTCTG+AGG | 0.645915 | 5.4:+66869246 | None:intergenic |
| CATTGTAACCACCACCGCCG+TGG | 0.646466 | 5.4:+66869016 | None:intergenic |
| GTAAACGATGCCAAATATGG+TGG | 0.647144 | 5.4:-66869048 | MS.gene90606:CDS |
| TAAGAAGAACCATAGCCAAG+AGG | 0.664133 | 5.4:+66869272 | None:intergenic |
| GGTGGTGGTGGATACAACAA+TGG | 0.666044 | 5.4:-66868976 | MS.gene90606:CDS |
| GGTGGTGGATACAACAATGG+TGG | 0.676280 | 5.4:-66868850 | MS.gene90606:CDS |
| GGTGGTGGATACAACAATGG+TGG | 0.676280 | 5.4:-66868892 | MS.gene90606:CDS |
| GGTGGTGGATACAACAATGG+TGG | 0.676280 | 5.4:-66868934 | MS.gene90606:CDS |
| ATTGGCAACCGCCTCCACCG+TGG | 0.678280 | 5.4:+66868758 | None:intergenic |
| GGTGGAGGTGGTTACAACCA+TGG | 0.679817 | 5.4:-66868832 | MS.gene90606:CDS |
| AATGGTGGAGGTTTCAACCA+CGG | 0.680337 | 5.4:-66868997 | MS.gene90606:CDS |
| GGTGGTGGTGGATACAACAA+TGG | 0.684345 | 5.4:-66868853 | MS.gene90606:CDS |
| GGTGGTGGTGGATACAACAA+TGG | 0.684345 | 5.4:-66868895 | MS.gene90606:CDS |
| GGTGGTGGTGGATACAACAA+TGG | 0.684345 | 5.4:-66868937 | MS.gene90606:CDS |
| TATGGTGGAGGTTACAACCA+CGG | 0.702708 | 5.4:-66869033 | MS.gene90606:CDS |
| TGTTGTATCCACCACCACCG+TGG | 0.714982 | 5.4:+66868857 | None:intergenic |
| TGTTGTATCCACCACCACCG+TGG | 0.714982 | 5.4:+66868899 | None:intergenic |
| TGTTGTATCCACCACCACCG+TGG | 0.714982 | 5.4:+66868941 | None:intergenic |
| TGTTGTATCCACCACCACCG+TGG | 0.714982 | 5.4:+66868980 | None:intergenic |
| GGTGGTGGCTACAACCATGG+TGG | 0.723784 | 5.4:-66868793 | MS.gene90606:CDS |
| GGTGGAGGTGGATACAACCA+CGG | 0.728168 | 5.4:-66868874 | MS.gene90606:CDS |
| GGTGGAGGTGGATACAACCA+CGG | 0.728168 | 5.4:-66868916 | MS.gene90606:CDS |
| AATGGCGGTGGATACAACCA+CGG | 0.732761 | 5.4:-66868958 | MS.gene90606:CDS |
| GGTGGTGGATACAACAATGG+CGG | 0.734675 | 5.4:-66868973 | MS.gene90606:CDS |
| GGAGGTGGTTACAACCATGG+TGG | 0.740649 | 5.4:-66868829 | MS.gene90606:CDS |
| GGCGGTGGATACAACCACGG+TGG | 0.764343 | 5.4:-66868955 | MS.gene90606:CDS |
| GGTGGAGGTTTCAACCACGG+TGG | 0.772592 | 5.4:-66868994 | MS.gene90606:CDS |
| GGAGGCGGTTACAACCACGG+TGG | 0.788813 | 5.4:-66868772 | MS.gene90606:CDS |
| GGAGGTGGATACAACCACGG+TGG | 0.823069 | 5.4:-66868871 | MS.gene90606:CDS |
| GGAGGTGGATACAACCACGG+TGG | 0.823069 | 5.4:-66868913 | MS.gene90606:CDS |
| GGTGGAGGTTACAACCACGG+CGG | 0.825418 | 5.4:-66869030 | MS.gene90606:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATATATAGCTCACCCTTTT+TGG | + | chr5.4:66868790-66868809 | None:intergenic | 30.0% |
| AACTACATCTGATGCCAAAA+AGG | - | chr5.4:66868773-66868792 | MS.gene90606:CDS | 35.0% | |
| ACTACATCTGATGCCAAAAA+GGG | - | chr5.4:66868774-66868793 | MS.gene90606:CDS | 35.0% | |
| GAAGTAAACGATGCCAAATA+TGG | - | chr5.4:66868937-66868956 | MS.gene90606:CDS | 35.0% | |
| AGAAAAGCAATCCTCATCCT+AGG | - | chr5.4:66868693-66868712 | MS.gene90606:CDS | 40.0% | |
| GTAAACGATGCCAAATATGG+TGG | - | chr5.4:66868940-66868959 | MS.gene90606:CDS | 40.0% | |
| GTTGTAACCTCCACCATATT+TGG | + | chr5.4:66868953-66868972 | None:intergenic | 40.0% | |
| TAAGAAGAACCATAGCCAAG+AGG | + | chr5.4:66868719-66868738 | None:intergenic | 40.0% | |
| ! | ATTTGTTGCCATGCAAGCTA+AGG | - | chr5.4:66869287-66869306 | MS.gene90606:CDS | 40.0% |
| AACGATGCCAAATATGGTGG+AGG | - | chr5.4:66868943-66868962 | MS.gene90606:CDS | 45.0% | |
| TTCCTCAGAAGTCTCAGCTA+GGG | - | chr5.4:66868740-66868759 | MS.gene90606:CDS | 45.0% | |
| TTTCCTCAGAAGTCTCAGCT+AGG | - | chr5.4:66868739-66868758 | MS.gene90606:CDS | 45.0% | |
| ! | AATGGTGGAGGTTTCAACCA+CGG | - | chr5.4:66868991-66869010 | MS.gene90606:CDS | 45.0% |
| ! | TATGGTGGAGGTTACAACCA+CGG | - | chr5.4:66868955-66868974 | MS.gene90606:CDS | 45.0% |
| !! | AGTGTTGTCCTTAGCTTGCA+TGG | + | chr5.4:66869298-66869317 | None:intergenic | 45.0% |
| AATCCTCATCCTAGGCCTCT+TGG | - | chr5.4:66868701-66868720 | MS.gene90606:CDS | 50.0% | |
| AATGGCGGTGGATACAACCA+CGG | - | chr5.4:66869030-66869049 | MS.gene90606:CDS | 50.0% | |
| ACCTGCCATGGCAATGGTAT+TGG | + | chr5.4:66869251-66869270 | None:intergenic | 50.0% | |
| GGTGGATACAACAATGGTGG+AGG | - | chr5.4:66869057-66869076 | MS.gene90606:CDS | 50.0% | |
| GGTTGCCAATACCATTGCCA+TGG | - | chr5.4:66869243-66869262 | MS.gene90606:CDS | 50.0% | |
| ! | GGATACAACAATGGTGGAGG+TGG | - | chr5.4:66869060-66869079 | MS.gene90606:CDS | 50.0% |
| !! | AATGGTGGTGGCTACAACCA+TGG | - | chr5.4:66869192-66869211 | MS.gene90606:intron | 50.0% |
| !! | GGTGGTGGATACAACAATGG+CGG | - | chr5.4:66869015-66869034 | MS.gene90606:CDS | 50.0% |
| !! | GGTGGTGGATACAACAATGG+TGG | - | chr5.4:66869015-66869034 | MS.gene90606:CDS | 50.0% |
| !! | GGTGGTGGTGGATACAACAA+TGG | - | chr5.4:66869012-66869031 | MS.gene90606:CDS | 50.0% |
| CATCCTAGGCCTCTTGGCTA+TGG | - | chr5.4:66868707-66868726 | MS.gene90606:CDS | 55.0% | |
| CATTGTAACCGCCTCCACCA+TGG | + | chr5.4:66869176-66869195 | None:intergenic | 55.0% | |
| GAACCATAGCCAAGAGGCCT+AGG | + | chr5.4:66868713-66868732 | None:intergenic | 55.0% | |
| GCCAATACCATTGCCATGGC+AGG | - | chr5.4:66869247-66869266 | MS.gene90606:CDS | 55.0% | |
| GGAGGTGGTTACAACCATGG+TGG | - | chr5.4:66869159-66869178 | MS.gene90606:intron | 55.0% | |
| GGTGGAGGTGGATACAACCA+CGG | - | chr5.4:66869072-66869091 | MS.gene90606:CDS | 55.0% | |
| GGTGGAGGTGGTTACAACCA+TGG | - | chr5.4:66869156-66869175 | MS.gene90606:intron | 55.0% | |
| GGTGGATACAACAATGGCGG+TGG | - | chr5.4:66869018-66869037 | MS.gene90606:CDS | 55.0% | |
| GGTGGTTACAACCATGGTGG+AGG | - | chr5.4:66869162-66869181 | MS.gene90606:intron | 55.0% | |
| GTCCCTAGCTGAGACTTCTG+AGG | + | chr5.4:66868745-66868764 | None:intergenic | 55.0% | |
| TAGCCAAGAGGCCTAGGATG+AGG | + | chr5.4:66868707-66868726 | None:intergenic | 55.0% | |
| TGTTGTATCCACCACCACCG+TGG | + | chr5.4:66869011-66869030 | None:intergenic | 55.0% | |
| ! | CATGGTGGAGGCGGTTACAA+TGG | - | chr5.4:66869174-66869193 | MS.gene90606:intron | 55.0% |
| ! | GGTGGTGGTTACAATGGTGG+AGG | - | chr5.4:66868979-66868998 | MS.gene90606:CDS | 55.0% |
| ! | GGTTACAACCATGGTGGAGG+CGG | - | chr5.4:66869165-66869184 | MS.gene90606:intron | 55.0% |
| AGCAGCACCTGCCATGGCAA+TGG | + | chr5.4:66869257-66869276 | None:intergenic | 60.0% | |
| CATGTGAGCAGCACCTGCCA+TGG | + | chr5.4:66869263-66869282 | None:intergenic | 60.0% | |
| CATTGTAACCACCACCGCCG+TGG | + | chr5.4:66868975-66868994 | None:intergenic | 60.0% | |
| GGAGGCGGTTACAATGGTGG+TGG | - | chr5.4:66869180-66869199 | MS.gene90606:intron | 60.0% | |
| GGAGGTGGATACAACCACGG+TGG | - | chr5.4:66869075-66869094 | MS.gene90606:intron | 60.0% | |
| GGAGGTTTCAACCACGGTGG+TGG | - | chr5.4:66868997-66869016 | MS.gene90606:CDS | 60.0% | |
| GGTGGAGGCGGTTACAACCA+CGG | - | chr5.4:66869213-66869232 | MS.gene90606:intron | 60.0% | |
| GGTGGAGGCGGTTACAATGG+TGG | - | chr5.4:66869177-66869196 | MS.gene90606:intron | 60.0% | |
| GGTGGAGGTTACAACCACGG+CGG | - | chr5.4:66868958-66868977 | MS.gene90606:CDS | 60.0% | |
| GGTGGAGGTTTCAACCACGG+TGG | - | chr5.4:66868994-66869013 | MS.gene90606:CDS | 60.0% | |
| GGTGGATACAACCACGGTGG+TGG | - | chr5.4:66869036-66869055 | MS.gene90606:CDS | 60.0% | |
| GGTGGCTACAACCATGGTGG+AGG | - | chr5.4:66869198-66869217 | MS.gene90606:intron | 60.0% | |
| GGTTACAACCACGGTGGAGG+CGG | - | chr5.4:66869222-66869241 | MS.gene90606:CDS | 60.0% | |
| GGTTGTAACCGCCTCCACCA+TGG | + | chr5.4:66869212-66869231 | None:intergenic | 60.0% | |
| ! | CACGGCGGTGGTGGTTACAA+TGG | - | chr5.4:66868973-66868992 | MS.gene90606:CDS | 60.0% |
| ! | GGATACAACCACGGTGGTGG+TGG | - | chr5.4:66869039-66869058 | MS.gene90606:CDS | 60.0% |
| ! | GGCGGTGGTGGTTACAATGG+TGG | - | chr5.4:66868976-66868995 | MS.gene90606:CDS | 60.0% |
| ! | GGCTACAACCATGGTGGAGG+CGG | - | chr5.4:66869201-66869220 | MS.gene90606:intron | 60.0% |
| ! | GGTGGTGGCTACAACCATGG+TGG | - | chr5.4:66869195-66869214 | MS.gene90606:intron | 60.0% |
| ! | GGTTTCAACCACGGTGGTGG+TGG | - | chr5.4:66869000-66869019 | MS.gene90606:CDS | 60.0% |
| ATTGGCAACCGCCTCCACCG+TGG | + | chr5.4:66869233-66869252 | None:intergenic | 65.0% | |
| GGAGGCGGTTACAACCACGG+TGG | - | chr5.4:66869216-66869235 | MS.gene90606:CDS | 65.0% | |
| GGAGGTTACAACCACGGCGG+TGG | - | chr5.4:66868961-66868980 | MS.gene90606:CDS | 65.0% | |
| GGCGGTGGATACAACCACGG+TGG | - | chr5.4:66869033-66869052 | MS.gene90606:CDS | 65.0% | |
| GGCGGTTACAACCACGGTGG+AGG | - | chr5.4:66869219-66869238 | MS.gene90606:CDS | 65.0% | |
| GGTTACAACCACGGCGGTGG+TGG | - | chr5.4:66868964-66868983 | MS.gene90606:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 66868684 | 66869326 | 66868684 | ID=MS.gene90606 |
| chr5.4 | mRNA | 66868684 | 66869326 | 66868684 | ID=MS.gene90606.t1;Parent=MS.gene90606 |
| chr5.4 | exon | 66869215 | 66869326 | 66869215 | ID=MS.gene90606.t1.exon1;Parent=MS.gene90606.t1 |
| chr5.4 | CDS | 66869215 | 66869326 | 66869215 | ID=cds.MS.gene90606.t1;Parent=MS.gene90606.t1 |
| chr5.4 | exon | 66868684 | 66869093 | 66868684 | ID=MS.gene90606.t1.exon2;Parent=MS.gene90606.t1 |
| chr5.4 | CDS | 66868684 | 66869093 | 66868684 | ID=cds.MS.gene90606.t1;Parent=MS.gene90606.t1 |
| Gene Sequence |
| Protein sequence |
