Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90814.t1 | XP_003592769.1 | 96.2 | 313 | 11 | 1 | 1 | 312 | 18 | 330 | 4.70E-170 | 607.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90814.t1 | P22195 | 66.6 | 305 | 97 | 4 | 1 | 304 | 16 | 316 | 3.8e-112 | 406.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90814.t1 | G7IF04 | 96.2 | 313 | 11 | 1 | 1 | 312 | 18 | 330 | 3.4e-170 | 607.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene90814 | 0.816819 | 4.54E-52 | -1.69E-46 |
| MS.gene050720 | MS.gene90814 | 0.810133 | 1.34E-50 | -1.69E-46 |
| MS.gene051158 | MS.gene90814 | 0.815274 | 1.01E-51 | -1.69E-46 |
| MS.gene051996 | MS.gene90814 | 0.856412 | 3.27E-62 | -1.69E-46 |
| MS.gene052011 | MS.gene90814 | 0.810817 | 9.54E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene90814 | 0.846343 | 2.31E-59 | -1.69E-46 |
| MS.gene053406 | MS.gene90814 | 0.837471 | 5.10E-57 | -1.69E-46 |
| MS.gene054277 | MS.gene90814 | 0.834624 | 2.69E-56 | -1.69E-46 |
| MS.gene054742 | MS.gene90814 | 0.844222 | 8.64E-59 | -1.69E-46 |
| MS.gene055601 | MS.gene90814 | 0.81757 | 3.08E-52 | -1.69E-46 |
| MS.gene056076 | MS.gene90814 | 0.815595 | 8.53E-52 | -1.69E-46 |
| MS.gene056330 | MS.gene90814 | 0.847992 | 8.14E-60 | -1.69E-46 |
| MS.gene056680 | MS.gene90814 | 0.826357 | 2.84E-54 | -1.69E-46 |
| MS.gene056690 | MS.gene90814 | 0.806082 | 9.78E-50 | -1.69E-46 |
| MS.gene056691 | MS.gene90814 | 0.819609 | 1.06E-52 | -1.69E-46 |
| MS.gene056899 | MS.gene90814 | 0.813156 | 2.95E-51 | -1.69E-46 |
| MS.gene056920 | MS.gene90814 | 0.838236 | 3.24E-57 | -1.69E-46 |
| MS.gene056922 | MS.gene90814 | 0.812819 | 3.50E-51 | -1.69E-46 |
| MS.gene056923 | MS.gene90814 | 0.824963 | 6.07E-54 | -1.69E-46 |
| MS.gene056924 | MS.gene90814 | 0.829853 | 4.08E-55 | -1.69E-46 |
| MS.gene057544 | MS.gene90814 | 0.819197 | 1.32E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene90814 | 0.82421 | 9.13E-54 | -1.69E-46 |
| MS.gene059043 | MS.gene90814 | 0.803474 | 3.43E-49 | -1.69E-46 |
| MS.gene059891 | MS.gene90814 | 0.816947 | 4.25E-52 | -1.69E-46 |
| MS.gene059892 | MS.gene90814 | 0.816534 | 5.26E-52 | -1.69E-46 |
| MS.gene060087 | MS.gene90814 | 0.836242 | 1.05E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90814.t1 | MTR_1g115900 | 96.166 | 313 | 11 | 1 | 1 | 312 | 18 | 330 | 0.0 | 621 |
| MS.gene90814.t1 | MTR_7g026990 | 63.961 | 308 | 104 | 4 | 1 | 305 | 20 | 323 | 1.09e-138 | 395 |
| MS.gene90814.t1 | MTR_7g072510 | 62.207 | 299 | 109 | 3 | 7 | 304 | 17 | 312 | 5.85e-134 | 383 |
| MS.gene90814.t1 | MTR_7g072480 | 62.295 | 305 | 110 | 4 | 1 | 304 | 16 | 316 | 2.68e-132 | 379 |
| MS.gene90814.t1 | MTR_4g029200 | 59.344 | 305 | 120 | 3 | 1 | 304 | 37 | 338 | 9.43e-128 | 368 |
| MS.gene90814.t1 | MTR_4g029190 | 61.589 | 302 | 109 | 5 | 7 | 304 | 42 | 340 | 8.59e-127 | 365 |
| MS.gene90814.t1 | MTR_2g084080 | 57.705 | 305 | 125 | 3 | 1 | 304 | 16 | 317 | 1.15e-122 | 354 |
| MS.gene90814.t1 | MTR_2g084110 | 57.049 | 305 | 127 | 3 | 1 | 304 | 16 | 317 | 2.10e-122 | 353 |
| MS.gene90814.t1 | MTR_3g094650 | 57.566 | 304 | 123 | 4 | 1 | 301 | 19 | 319 | 1.06e-121 | 352 |
| MS.gene90814.t1 | MTR_2g084020 | 56.721 | 305 | 129 | 2 | 1 | 304 | 16 | 318 | 1.29e-120 | 349 |
| MS.gene90814.t1 | MTR_3g466180 | 61.204 | 299 | 112 | 3 | 7 | 304 | 28 | 323 | 7.45e-119 | 345 |
| MS.gene90814.t1 | MTR_3g072190 | 56.566 | 297 | 125 | 3 | 9 | 304 | 25 | 318 | 1.12e-118 | 344 |
| MS.gene90814.t1 | MTR_3g094670 | 59.596 | 297 | 114 | 4 | 8 | 301 | 26 | 319 | 6.12e-118 | 342 |
| MS.gene90814.t1 | MTR_2g084010 | 56.066 | 305 | 131 | 2 | 1 | 304 | 16 | 318 | 7.34e-118 | 342 |
| MS.gene90814.t1 | MTR_2g084090 | 55.882 | 306 | 130 | 4 | 1 | 304 | 16 | 318 | 1.02e-115 | 337 |
| MS.gene90814.t1 | MTR_3g094630 | 59.333 | 300 | 116 | 4 | 8 | 304 | 26 | 322 | 1.84e-114 | 333 |
| MS.gene90814.t1 | MTR_3g466200 | 54.545 | 308 | 132 | 5 | 1 | 304 | 17 | 320 | 3.43e-114 | 333 |
| MS.gene90814.t1 | MTR_2g084000 | 55.034 | 298 | 131 | 2 | 8 | 304 | 24 | 319 | 2.61e-113 | 330 |
| MS.gene90814.t1 | MTR_5g074970 | 54.305 | 302 | 130 | 4 | 8 | 304 | 28 | 326 | 2.56e-112 | 328 |
| MS.gene90814.t1 | MTR_5g083860 | 55.667 | 300 | 127 | 4 | 8 | 304 | 29 | 325 | 6.40e-112 | 327 |
| MS.gene90814.t1 | MTR_5g074760 | 54.934 | 304 | 129 | 6 | 6 | 304 | 21 | 321 | 1.60e-111 | 326 |
| MS.gene90814.t1 | MTR_5g074740 | 54.934 | 304 | 129 | 6 | 6 | 304 | 21 | 321 | 4.81e-111 | 325 |
| MS.gene90814.t1 | MTR_4g029170 | 52.288 | 306 | 140 | 4 | 2 | 304 | 19 | 321 | 3.64e-109 | 320 |
| MS.gene90814.t1 | MTR_5g074860 | 52.145 | 303 | 137 | 5 | 6 | 303 | 25 | 324 | 3.98e-109 | 320 |
| MS.gene90814.t1 | MTR_5g074710 | 52.961 | 304 | 135 | 5 | 6 | 304 | 21 | 321 | 2.68e-108 | 318 |
| MS.gene90814.t1 | MTR_4g029180 | 52.881 | 295 | 133 | 4 | 13 | 304 | 30 | 321 | 7.85e-106 | 311 |
| MS.gene90814.t1 | MTR_4g083710 | 52.649 | 302 | 136 | 4 | 8 | 304 | 25 | 324 | 5.23e-105 | 310 |
| MS.gene90814.t1 | MTR_3g467600 | 50.820 | 305 | 143 | 5 | 5 | 304 | 22 | 324 | 4.76e-103 | 305 |
| MS.gene90814.t1 | MTR_4g074995 | 51.827 | 301 | 127 | 4 | 8 | 304 | 22 | 308 | 7.75e-103 | 303 |
| MS.gene90814.t1 | MTR_3g072190 | 56.522 | 253 | 106 | 3 | 53 | 304 | 2 | 251 | 2.24e-97 | 288 |
| MS.gene90814.t1 | MTR_5g017860 | 47.727 | 308 | 150 | 4 | 5 | 304 | 22 | 326 | 3.18e-95 | 285 |
| MS.gene90814.t1 | MTR_4g074990 | 49.838 | 309 | 132 | 5 | 1 | 304 | 15 | 305 | 1.03e-94 | 283 |
| MS.gene90814.t1 | MTR_5g017850 | 46.885 | 305 | 151 | 4 | 8 | 304 | 25 | 326 | 5.62e-94 | 281 |
| MS.gene90814.t1 | MTR_5g021060 | 47.195 | 303 | 150 | 3 | 10 | 304 | 30 | 330 | 3.88e-93 | 280 |
| MS.gene90814.t1 | MTR_1g054205 | 47.097 | 310 | 152 | 6 | 6 | 305 | 20 | 327 | 2.24e-92 | 278 |
| MS.gene90814.t1 | MTR_7g093370 | 45.928 | 307 | 154 | 5 | 8 | 304 | 67 | 371 | 3.56e-92 | 279 |
| MS.gene90814.t1 | MTR_8g076820 | 46.865 | 303 | 151 | 3 | 10 | 304 | 30 | 330 | 9.07e-92 | 276 |
| MS.gene90814.t1 | MTR_2g029815 | 46.624 | 311 | 155 | 5 | 6 | 307 | 25 | 333 | 7.61e-91 | 275 |
| MS.gene90814.t1 | MTR_2g029800 | 45.833 | 312 | 158 | 4 | 5 | 307 | 24 | 333 | 8.74e-90 | 272 |
| MS.gene90814.t1 | MTR_2g029750 | 45.659 | 311 | 158 | 4 | 6 | 307 | 25 | 333 | 1.33e-89 | 271 |
| MS.gene90814.t1 | MTR_2g028980 | 45.253 | 316 | 162 | 4 | 1 | 307 | 20 | 333 | 2.75e-89 | 271 |
| MS.gene90814.t1 | MTR_5g014100 | 47.302 | 315 | 149 | 5 | 4 | 304 | 20 | 331 | 3.94e-89 | 270 |
| MS.gene90814.t1 | MTR_1g022970 | 46.711 | 304 | 151 | 4 | 10 | 304 | 46 | 347 | 7.74e-89 | 269 |
| MS.gene90814.t1 | MTR_4g074980 | 49.498 | 299 | 122 | 5 | 8 | 304 | 23 | 294 | 1.02e-88 | 267 |
| MS.gene90814.t1 | MTR_2g029740 | 45.338 | 311 | 159 | 4 | 6 | 307 | 25 | 333 | 1.78e-88 | 268 |
| MS.gene90814.t1 | MTR_4g125940 | 43.671 | 316 | 163 | 5 | 1 | 305 | 19 | 330 | 1.20e-87 | 266 |
| MS.gene90814.t1 | MTR_2g029830 | 44.984 | 309 | 159 | 4 | 8 | 307 | 26 | 332 | 4.01e-87 | 265 |
| MS.gene90814.t1 | MTR_2g029560 | 44.337 | 309 | 161 | 4 | 8 | 307 | 22 | 328 | 4.13e-87 | 265 |
| MS.gene90814.t1 | MTR_2g029820 | 43.910 | 312 | 164 | 4 | 5 | 307 | 24 | 333 | 2.82e-86 | 263 |
| MS.gene90814.t1 | MTR_5g049280 | 43.087 | 311 | 163 | 7 | 6 | 304 | 29 | 337 | 4.63e-85 | 259 |
| MS.gene90814.t1 | MTR_2g040000 | 46.474 | 312 | 149 | 7 | 7 | 305 | 26 | 332 | 9.99e-85 | 258 |
| MS.gene90814.t1 | MTR_2g029850 | 45.397 | 315 | 161 | 5 | 6 | 311 | 25 | 337 | 1.12e-84 | 259 |
| MS.gene90814.t1 | MTR_4g122640 | 45.098 | 306 | 160 | 3 | 5 | 304 | 33 | 336 | 1.50e-84 | 258 |
| MS.gene90814.t1 | MTR_2g029860 | 44.051 | 311 | 163 | 4 | 6 | 307 | 25 | 333 | 1.15e-83 | 256 |
| MS.gene90814.t1 | MTR_2g029730 | 44.337 | 309 | 161 | 5 | 8 | 307 | 23 | 329 | 4.30e-83 | 254 |
| MS.gene90814.t1 | MTR_4g074980 | 54.506 | 233 | 99 | 4 | 8 | 235 | 23 | 253 | 1.45e-81 | 247 |
| MS.gene90814.t1 | MTR_0155s0040 | 42.105 | 304 | 167 | 6 | 2 | 304 | 20 | 315 | 1.54e-81 | 249 |
| MS.gene90814.t1 | MTR_5g074860 | 43.894 | 303 | 123 | 6 | 6 | 303 | 25 | 285 | 5.92e-81 | 247 |
| MS.gene90814.t1 | MTR_4g030890 | 42.857 | 308 | 162 | 5 | 5 | 304 | 95 | 396 | 4.01e-79 | 246 |
| MS.gene90814.t1 | MTR_3g092990 | 43.226 | 310 | 164 | 5 | 5 | 305 | 21 | 327 | 6.53e-79 | 243 |
| MS.gene90814.t1 | MTR_2g029910 | 43.492 | 315 | 166 | 6 | 6 | 310 | 26 | 338 | 4.03e-78 | 242 |
| MS.gene90814.t1 | MTR_1g077000 | 42.140 | 299 | 159 | 6 | 10 | 304 | 39 | 327 | 4.49e-78 | 241 |
| MS.gene90814.t1 | MTR_2g008710 | 43.377 | 302 | 153 | 6 | 14 | 304 | 31 | 325 | 1.45e-77 | 239 |
| MS.gene90814.t1 | MTR_4g031140 | 41.558 | 308 | 166 | 5 | 6 | 305 | 24 | 325 | 3.61e-77 | 239 |
| MS.gene90814.t1 | MTR_4g125940 | 44.964 | 278 | 138 | 5 | 39 | 305 | 2 | 275 | 1.17e-76 | 236 |
| MS.gene90814.t1 | MTR_1g038680 | 42.904 | 303 | 158 | 7 | 14 | 304 | 33 | 332 | 1.17e-75 | 235 |
| MS.gene90814.t1 | MTR_1g101830 | 42.810 | 306 | 162 | 6 | 6 | 304 | 23 | 322 | 2.79e-75 | 234 |
| MS.gene90814.t1 | MTR_2g088770 | 40.895 | 313 | 172 | 6 | 1 | 304 | 17 | 325 | 3.12e-75 | 234 |
| MS.gene90814.t1 | MTR_4g046713 | 40.895 | 313 | 171 | 7 | 1 | 304 | 19 | 326 | 2.14e-74 | 231 |
| MS.gene90814.t1 | MTR_7g086820 | 42.053 | 302 | 163 | 6 | 8 | 304 | 18 | 312 | 5.11e-74 | 230 |
| MS.gene90814.t1 | MTR_1g086320 | 41.083 | 314 | 168 | 7 | 4 | 304 | 24 | 333 | 6.98e-73 | 228 |
| MS.gene90814.t1 | MTR_1g025980 | 39.103 | 312 | 173 | 7 | 1 | 303 | 14 | 317 | 1.49e-72 | 226 |
| MS.gene90814.t1 | MTR_1g086490 | 40.938 | 320 | 167 | 6 | 4 | 304 | 24 | 340 | 7.89e-72 | 226 |
| MS.gene90814.t1 | MTR_5g022870 | 40.645 | 310 | 165 | 7 | 4 | 304 | 17 | 316 | 1.63e-71 | 224 |
| MS.gene90814.t1 | MTR_6g027440 | 41.447 | 304 | 167 | 7 | 8 | 306 | 19 | 316 | 4.56e-71 | 223 |
| MS.gene90814.t1 | MTR_7g107520 | 40.514 | 311 | 170 | 6 | 2 | 304 | 17 | 320 | 1.84e-70 | 221 |
| MS.gene90814.t1 | MTR_8g075100 | 39.871 | 311 | 166 | 7 | 4 | 304 | 20 | 319 | 4.87e-70 | 220 |
| MS.gene90814.t1 | MTR_2g437770 | 40.132 | 304 | 163 | 7 | 10 | 305 | 50 | 342 | 4.34e-69 | 219 |
| MS.gene90814.t1 | MTR_7g086870 | 39.130 | 299 | 175 | 6 | 8 | 305 | 20 | 312 | 1.15e-68 | 216 |
| MS.gene90814.t1 | MTR_4g114210 | 40.881 | 318 | 167 | 9 | 1 | 304 | 10 | 320 | 2.73e-68 | 216 |
| MS.gene90814.t1 | MTR_2g029830 | 43.893 | 262 | 136 | 4 | 55 | 307 | 5 | 264 | 2.13e-67 | 212 |
| MS.gene90814.t1 | MTR_3g092990 | 40.968 | 310 | 160 | 6 | 5 | 305 | 21 | 316 | 4.83e-67 | 213 |
| MS.gene90814.t1 | MTR_2g077990 | 39.458 | 332 | 159 | 8 | 8 | 300 | 74 | 402 | 4.97e-66 | 213 |
| MS.gene90814.t1 | MTR_2g067440 | 39.940 | 333 | 153 | 10 | 8 | 300 | 58 | 383 | 1.42e-65 | 211 |
| MS.gene90814.t1 | MTR_2g078610 | 37.462 | 331 | 167 | 6 | 8 | 300 | 74 | 402 | 1.92e-64 | 209 |
| MS.gene90814.t1 | MTR_1g090760 | 39.016 | 305 | 174 | 6 | 6 | 300 | 24 | 326 | 5.74e-64 | 205 |
| MS.gene90814.t1 | MTR_6g043460 | 38.206 | 301 | 177 | 5 | 10 | 308 | 36 | 329 | 2.97e-62 | 201 |
| MS.gene90814.t1 | MTR_0286s0010 | 39.809 | 314 | 176 | 8 | 1 | 304 | 24 | 334 | 4.58e-62 | 200 |
| MS.gene90814.t1 | MTR_6g008075 | 39.809 | 314 | 176 | 8 | 1 | 304 | 24 | 334 | 4.58e-62 | 200 |
| MS.gene90814.t1 | MTR_3g072210 | 52.381 | 189 | 86 | 3 | 118 | 304 | 52 | 238 | 4.48e-61 | 194 |
| MS.gene90814.t1 | MTR_7g029030 | 39.465 | 299 | 168 | 8 | 9 | 300 | 24 | 316 | 4.97e-61 | 197 |
| MS.gene90814.t1 | MTR_2g078280 | 39.130 | 322 | 154 | 8 | 8 | 290 | 74 | 392 | 2.51e-60 | 197 |
| MS.gene90814.t1 | MTR_6g043280 | 39.057 | 297 | 174 | 6 | 10 | 304 | 41 | 332 | 4.27e-60 | 195 |
| MS.gene90814.t1 | MTR_4g133800 | 39.073 | 302 | 166 | 7 | 11 | 304 | 42 | 333 | 4.53e-60 | 195 |
| MS.gene90814.t1 | MTR_2g008730 | 38.079 | 302 | 145 | 6 | 14 | 304 | 31 | 301 | 5.72e-60 | 194 |
| MS.gene90814.t1 | MTR_8g062780 | 38.312 | 308 | 179 | 6 | 6 | 304 | 19 | 324 | 5.97e-60 | 194 |
| MS.gene90814.t1 | MTR_5g074700 | 47.345 | 226 | 99 | 7 | 83 | 304 | 5 | 214 | 1.26e-59 | 190 |
| MS.gene90814.t1 | MTR_5g033470 | 37.662 | 308 | 176 | 7 | 10 | 304 | 73 | 377 | 2.92e-59 | 194 |
| MS.gene90814.t1 | MTR_1g066710 | 34.539 | 304 | 189 | 6 | 8 | 305 | 25 | 324 | 6.13e-59 | 192 |
| MS.gene90814.t1 | MTR_4g095450 | 40.129 | 309 | 170 | 8 | 1 | 300 | 18 | 320 | 1.37e-58 | 191 |
| MS.gene90814.t1 | MTR_1g066380 | 34.437 | 302 | 192 | 5 | 8 | 305 | 25 | 324 | 1.92e-57 | 188 |
| MS.gene90814.t1 | MTR_2g008160 | 36.570 | 309 | 181 | 6 | 6 | 304 | 20 | 323 | 2.36e-57 | 187 |
| MS.gene90814.t1 | MTR_5g016010 | 38.019 | 313 | 172 | 9 | 6 | 303 | 23 | 328 | 3.42e-57 | 187 |
| MS.gene90814.t1 | MTR_4g087965 | 37.377 | 305 | 175 | 8 | 9 | 300 | 41 | 342 | 1.53e-56 | 186 |
| MS.gene90814.t1 | MTR_1g009750 | 38.387 | 310 | 174 | 9 | 7 | 304 | 24 | 328 | 5.49e-56 | 184 |
| MS.gene90814.t1 | MTR_4g132490 | 34.211 | 304 | 188 | 5 | 9 | 304 | 28 | 327 | 8.94e-55 | 181 |
| MS.gene90814.t1 | MTR_7g072490 | 46.053 | 228 | 67 | 4 | 56 | 283 | 2 | 173 | 2.34e-54 | 176 |
| MS.gene90814.t1 | MTR_2g067450 | 38.264 | 311 | 161 | 11 | 8 | 300 | 9 | 306 | 3.39e-54 | 179 |
| MS.gene90814.t1 | MTR_6g043240 | 36.455 | 299 | 179 | 7 | 10 | 305 | 42 | 332 | 5.04e-54 | 180 |
| MS.gene90814.t1 | MTR_2g099175 | 34.641 | 306 | 185 | 6 | 9 | 304 | 35 | 335 | 1.00e-53 | 179 |
| MS.gene90814.t1 | MTR_1g066640 | 34.323 | 303 | 191 | 6 | 8 | 305 | 25 | 324 | 2.39e-53 | 177 |
| MS.gene90814.t1 | MTR_4g127670 | 36.842 | 304 | 173 | 8 | 9 | 300 | 23 | 319 | 7.17e-52 | 174 |
| MS.gene90814.t1 | MTR_1g066680 | 33.444 | 302 | 194 | 6 | 8 | 305 | 25 | 323 | 8.64e-52 | 173 |
| MS.gene90814.t1 | MTR_4g132110 | 36.093 | 302 | 181 | 7 | 10 | 304 | 32 | 328 | 8.00e-51 | 171 |
| MS.gene90814.t1 | MTR_3g105790 | 36.334 | 311 | 179 | 7 | 5 | 304 | 20 | 322 | 3.30e-49 | 167 |
| MS.gene90814.t1 | MTR_4g132110 | 35.505 | 307 | 181 | 8 | 10 | 304 | 32 | 333 | 9.82e-49 | 166 |
| MS.gene90814.t1 | MTR_0147s0010 | 33.754 | 317 | 169 | 7 | 10 | 300 | 77 | 378 | 7.37e-48 | 165 |
| MS.gene90814.t1 | MTR_2g008160 | 33.333 | 303 | 164 | 6 | 6 | 304 | 20 | 288 | 3.91e-45 | 155 |
| MS.gene90814.t1 | MTR_1g066380 | 34.375 | 256 | 162 | 5 | 54 | 305 | 3 | 256 | 2.25e-44 | 152 |
| MS.gene90814.t1 | MTR_1g009750 | 35.484 | 310 | 166 | 9 | 7 | 304 | 24 | 311 | 3.23e-44 | 153 |
| MS.gene90814.t1 | MTR_3g072260 | 61.261 | 111 | 43 | 0 | 9 | 119 | 25 | 135 | 3.45e-44 | 148 |
| MS.gene90814.t1 | MTR_2g008160 | 43.503 | 177 | 97 | 2 | 6 | 182 | 20 | 193 | 2.92e-43 | 147 |
| MS.gene90814.t1 | MTR_2g029880 | 39.801 | 201 | 100 | 5 | 116 | 307 | 3 | 191 | 6.62e-35 | 126 |
| MS.gene90814.t1 | MTR_3g105790 | 35.146 | 239 | 140 | 5 | 77 | 304 | 12 | 246 | 2.43e-31 | 118 |
| MS.gene90814.t1 | MTR_2g078560 | 33.632 | 223 | 109 | 7 | 121 | 305 | 101 | 322 | 6.17e-26 | 105 |
| MS.gene90814.t1 | MTR_2g077980 | 29.617 | 287 | 147 | 10 | 62 | 300 | 1 | 280 | 9.82e-26 | 103 |
| MS.gene90814.t1 | MTR_7g086790 | 39.474 | 152 | 80 | 4 | 57 | 208 | 17 | 156 | 7.09e-23 | 94.0 |
| MS.gene90814.t1 | MTR_1g089005 | 46.018 | 113 | 54 | 2 | 10 | 116 | 15 | 126 | 2.11e-22 | 91.7 |
| MS.gene90814.t1 | MTR_3g462850 | 36.111 | 144 | 79 | 6 | 173 | 305 | 9 | 150 | 2.92e-22 | 91.3 |
| MS.gene90814.t1 | MTR_5g058120 | 37.952 | 166 | 89 | 5 | 145 | 308 | 7 | 160 | 3.78e-22 | 93.6 |
| MS.gene90814.t1 | MTR_6g048160 | 60.870 | 69 | 23 | 2 | 49 | 117 | 22 | 86 | 1.96e-21 | 87.0 |
| MS.gene90814.t1 | MTR_4g114220 | 46.296 | 108 | 45 | 3 | 44 | 148 | 37 | 134 | 1.12e-20 | 86.7 |
| MS.gene90814.t1 | MTR_4g031040 | 32.143 | 168 | 74 | 4 | 71 | 237 | 3 | 131 | 1.79e-18 | 80.5 |
| MS.gene90814.t1 | MTR_2g029930 | 39.216 | 102 | 34 | 3 | 6 | 93 | 15 | 102 | 4.12e-17 | 75.9 |
| MS.gene90814.t1 | MTR_5g074770 | 40.217 | 92 | 51 | 2 | 213 | 303 | 20 | 108 | 8.34e-17 | 75.1 |
| MS.gene90814.t1 | MTR_7g086810 | 33.333 | 120 | 54 | 1 | 8 | 127 | 4 | 97 | 1.42e-15 | 75.1 |
| MS.gene90814.t1 | MTR_3g086710 | 44.737 | 76 | 39 | 1 | 2 | 77 | 11 | 83 | 2.08e-13 | 65.5 |
| MS.gene90814.t1 | MTR_3g107060 | 34.507 | 142 | 80 | 4 | 42 | 179 | 106 | 238 | 5.17e-13 | 68.9 |
| MS.gene90814.t1 | MTR_6g071110 | 29.586 | 169 | 91 | 7 | 14 | 167 | 4 | 159 | 1.05e-12 | 65.5 |
| MS.gene90814.t1 | MTR_4g012865 | 41.176 | 68 | 40 | 0 | 10 | 77 | 77 | 144 | 2.14e-12 | 64.3 |
| MS.gene90814.t1 | MTR_1g098320 | 38.554 | 83 | 50 | 1 | 227 | 309 | 48 | 129 | 4.28e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90814.t1 | AT5G05340 | 56.000 | 300 | 126 | 4 | 8 | 304 | 28 | 324 | 6.57e-115 | 335 |
| MS.gene90814.t1 | AT5G58400 | 52.459 | 305 | 138 | 4 | 1 | 301 | 21 | 322 | 3.76e-106 | 313 |
| MS.gene90814.t1 | AT1G14550 | 50.333 | 300 | 144 | 3 | 8 | 304 | 24 | 321 | 8.20e-102 | 301 |
| MS.gene90814.t1 | AT5G58390 | 50.654 | 306 | 148 | 2 | 1 | 304 | 12 | 316 | 4.85e-99 | 294 |
| MS.gene90814.t1 | AT4G36430 | 45.098 | 306 | 158 | 3 | 8 | 305 | 28 | 331 | 2.42e-95 | 285 |
| MS.gene90814.t1 | AT2G18150 | 46.488 | 299 | 150 | 3 | 14 | 304 | 40 | 336 | 3.38e-95 | 285 |
| MS.gene90814.t1 | AT5G06730 | 47.152 | 316 | 156 | 5 | 6 | 312 | 29 | 342 | 1.95e-94 | 284 |
| MS.gene90814.t1 | AT1G14540 | 46.844 | 301 | 156 | 3 | 6 | 304 | 17 | 315 | 3.05e-94 | 282 |
| MS.gene90814.t1 | AT5G06720 | 47.403 | 308 | 151 | 5 | 6 | 304 | 28 | 333 | 7.35e-94 | 281 |
| MS.gene90814.t1 | AT2G18140 | 45.545 | 303 | 155 | 3 | 10 | 304 | 35 | 335 | 8.11e-93 | 279 |
| MS.gene90814.t1 | AT1G44970 | 47.436 | 312 | 153 | 4 | 2 | 304 | 37 | 346 | 2.18e-92 | 278 |
| MS.gene90814.t1 | AT5G19890 | 45.860 | 314 | 153 | 5 | 1 | 304 | 21 | 327 | 5.44e-90 | 271 |
| MS.gene90814.t1 | AT4G08770 | 46.326 | 313 | 155 | 5 | 6 | 307 | 20 | 330 | 1.49e-89 | 271 |
| MS.gene90814.t1 | AT5G66390 | 45.875 | 303 | 154 | 3 | 10 | 304 | 33 | 333 | 2.81e-88 | 268 |
| MS.gene90814.t1 | AT3G50990 | 46.230 | 305 | 154 | 4 | 8 | 304 | 39 | 341 | 3.20e-88 | 268 |
| MS.gene90814.t1 | AT2G38380 | 46.774 | 310 | 153 | 5 | 5 | 304 | 26 | 333 | 4.74e-88 | 267 |
| MS.gene90814.t1 | AT2G38390 | 45.806 | 310 | 156 | 5 | 5 | 304 | 26 | 333 | 2.24e-87 | 266 |
| MS.gene90814.t1 | AT3G32980 | 45.367 | 313 | 158 | 6 | 6 | 307 | 27 | 337 | 1.91e-86 | 263 |
| MS.gene90814.t1 | AT4G08780 | 44.409 | 313 | 161 | 5 | 6 | 307 | 20 | 330 | 1.25e-85 | 261 |
| MS.gene90814.t1 | AT2G35380 | 46.753 | 308 | 149 | 4 | 10 | 304 | 30 | 335 | 2.95e-85 | 260 |
| MS.gene90814.t1 | AT1G49570 | 45.016 | 311 | 157 | 6 | 3 | 302 | 41 | 348 | 1.72e-84 | 258 |
| MS.gene90814.t1 | AT3G49120 | 44.409 | 313 | 161 | 6 | 6 | 307 | 28 | 338 | 2.40e-84 | 258 |
| MS.gene90814.t1 | AT3G49110 | 44.409 | 313 | 161 | 6 | 6 | 307 | 29 | 339 | 1.90e-83 | 256 |
| MS.gene90814.t1 | AT4G16270 | 46.205 | 303 | 151 | 4 | 10 | 304 | 50 | 348 | 3.95e-82 | 252 |
| MS.gene90814.t1 | AT1G68850 | 41.558 | 308 | 165 | 6 | 10 | 304 | 30 | 335 | 7.40e-81 | 248 |
| MS.gene90814.t1 | AT2G22420 | 42.345 | 307 | 163 | 6 | 6 | 304 | 19 | 319 | 7.76e-79 | 243 |
| MS.gene90814.t1 | AT5G19880 | 42.500 | 320 | 162 | 7 | 1 | 304 | 16 | 329 | 2.71e-77 | 239 |
| MS.gene90814.t1 | AT4G33420 | 41.554 | 296 | 165 | 5 | 10 | 304 | 37 | 325 | 4.77e-76 | 236 |
| MS.gene90814.t1 | AT4G33420 | 41.554 | 296 | 165 | 5 | 10 | 304 | 84 | 372 | 1.78e-75 | 236 |
| MS.gene90814.t1 | AT3G03670 | 42.157 | 306 | 163 | 6 | 8 | 304 | 21 | 321 | 4.88e-75 | 233 |
| MS.gene90814.t1 | AT3G01190 | 43.590 | 312 | 149 | 8 | 7 | 304 | 23 | 321 | 2.76e-74 | 231 |
| MS.gene90814.t1 | AT5G15180 | 41.100 | 309 | 157 | 6 | 10 | 304 | 32 | 329 | 4.26e-74 | 231 |
| MS.gene90814.t1 | AT5G51890 | 40.000 | 310 | 166 | 8 | 6 | 304 | 22 | 322 | 7.71e-72 | 225 |
| MS.gene90814.t1 | AT1G05260 | 40.717 | 307 | 169 | 6 | 8 | 305 | 24 | 326 | 6.14e-71 | 223 |
| MS.gene90814.t1 | AT5G64120 | 41.414 | 297 | 161 | 5 | 14 | 304 | 39 | 328 | 3.12e-70 | 221 |
| MS.gene90814.t1 | AT4G11290 | 40.453 | 309 | 171 | 7 | 6 | 304 | 21 | 326 | 4.94e-70 | 221 |
| MS.gene90814.t1 | AT2G41480 | 39.748 | 317 | 171 | 8 | 1 | 304 | 19 | 328 | 1.00e-69 | 220 |
| MS.gene90814.t1 | AT5G40150 | 40.864 | 301 | 172 | 5 | 8 | 304 | 30 | 328 | 7.70e-69 | 218 |
| MS.gene90814.t1 | AT5G42180 | 39.735 | 302 | 166 | 6 | 10 | 303 | 23 | 316 | 9.59e-69 | 217 |
| MS.gene90814.t1 | AT3G28200 | 41.333 | 300 | 171 | 5 | 8 | 304 | 19 | 316 | 1.13e-68 | 217 |
| MS.gene90814.t1 | AT1G05240 | 38.907 | 311 | 163 | 8 | 10 | 304 | 26 | 325 | 1.69e-68 | 216 |
| MS.gene90814.t1 | AT1G05250 | 38.907 | 311 | 163 | 8 | 10 | 304 | 26 | 325 | 1.69e-68 | 216 |
| MS.gene90814.t1 | AT3G21770 | 39.550 | 311 | 173 | 7 | 1 | 300 | 18 | 324 | 4.36e-68 | 216 |
| MS.gene90814.t1 | AT1G71695 | 41.830 | 306 | 163 | 8 | 10 | 307 | 44 | 342 | 2.74e-66 | 212 |
| MS.gene90814.t1 | AT5G17820 | 39.474 | 304 | 165 | 7 | 8 | 304 | 22 | 313 | 3.38e-66 | 210 |
| MS.gene90814.t1 | AT4G26010 | 38.591 | 298 | 174 | 7 | 8 | 304 | 20 | 309 | 7.74e-66 | 209 |
| MS.gene90814.t1 | AT4G26010 | 38.591 | 298 | 174 | 7 | 8 | 304 | 48 | 337 | 2.10e-65 | 209 |
| MS.gene90814.t1 | AT4G33870 | 35.072 | 345 | 155 | 6 | 10 | 300 | 68 | 397 | 3.96e-65 | 210 |
| MS.gene90814.t1 | AT5G17820 | 39.474 | 304 | 165 | 7 | 8 | 304 | 75 | 366 | 4.86e-65 | 209 |
| MS.gene90814.t1 | AT2G39040 | 41.100 | 309 | 166 | 8 | 9 | 304 | 45 | 350 | 2.19e-63 | 204 |
| MS.gene90814.t1 | AT1G77100 | 40.000 | 305 | 172 | 8 | 6 | 304 | 20 | 319 | 1.14e-62 | 201 |
| MS.gene90814.t1 | AT5G39580 | 40.268 | 298 | 164 | 6 | 14 | 304 | 29 | 319 | 1.40e-62 | 201 |
| MS.gene90814.t1 | AT2G35380 | 46.341 | 246 | 117 | 4 | 72 | 304 | 4 | 247 | 5.08e-62 | 197 |
| MS.gene90814.t1 | AT5G14130 | 37.987 | 308 | 177 | 6 | 6 | 304 | 28 | 330 | 2.97e-61 | 198 |
| MS.gene90814.t1 | AT1G30870 | 37.255 | 306 | 172 | 6 | 10 | 305 | 51 | 346 | 3.70e-61 | 198 |
| MS.gene90814.t1 | AT5G14130 | 37.987 | 308 | 177 | 6 | 6 | 304 | 69 | 371 | 8.42e-61 | 198 |
| MS.gene90814.t1 | AT4G25980 | 37.097 | 310 | 175 | 8 | 8 | 304 | 24 | 326 | 1.17e-60 | 196 |
| MS.gene90814.t1 | AT1G34510 | 38.591 | 298 | 174 | 7 | 8 | 304 | 20 | 309 | 2.47e-60 | 195 |
| MS.gene90814.t1 | AT5G64100 | 38.284 | 303 | 167 | 7 | 12 | 304 | 39 | 331 | 4.21e-60 | 195 |
| MS.gene90814.t1 | AT5G64110 | 39.344 | 305 | 159 | 8 | 14 | 304 | 38 | 330 | 1.00e-58 | 191 |
| MS.gene90814.t1 | AT1G24110 | 38.944 | 303 | 171 | 7 | 8 | 300 | 20 | 318 | 1.14e-58 | 191 |
| MS.gene90814.t1 | AT2G18980 | 39.806 | 309 | 166 | 9 | 8 | 304 | 23 | 323 | 3.04e-58 | 190 |
| MS.gene90814.t1 | AT5G67400 | 37.785 | 307 | 175 | 7 | 6 | 300 | 23 | 325 | 1.58e-56 | 186 |
| MS.gene90814.t1 | AT2G24800 | 37.864 | 309 | 172 | 7 | 8 | 304 | 29 | 329 | 2.28e-56 | 185 |
| MS.gene90814.t1 | AT4G30170 | 37.299 | 311 | 175 | 8 | 6 | 304 | 23 | 325 | 1.09e-55 | 184 |
| MS.gene90814.t1 | AT4G31760 | 38.019 | 313 | 173 | 8 | 4 | 304 | 23 | 326 | 1.18e-55 | 183 |
| MS.gene90814.t1 | AT2G34060 | 38.636 | 308 | 167 | 10 | 9 | 300 | 41 | 342 | 1.67e-55 | 184 |
| MS.gene90814.t1 | AT4G37530 | 36.334 | 311 | 174 | 9 | 6 | 300 | 23 | 325 | 2.02e-55 | 183 |
| MS.gene90814.t1 | AT3G49960 | 39.297 | 313 | 162 | 12 | 6 | 300 | 23 | 325 | 3.65e-55 | 182 |
| MS.gene90814.t1 | AT4G37520 | 37.742 | 310 | 167 | 10 | 8 | 300 | 25 | 325 | 1.33e-54 | 181 |
| MS.gene90814.t1 | AT2G37130 | 35.974 | 303 | 183 | 7 | 9 | 304 | 29 | 327 | 3.24e-54 | 180 |
| MS.gene90814.t1 | AT5G47000 | 37.829 | 304 | 179 | 7 | 8 | 304 | 31 | 331 | 5.61e-54 | 179 |
| MS.gene90814.t1 | AT2G43480 | 35.065 | 308 | 182 | 7 | 9 | 304 | 34 | 335 | 8.37e-54 | 179 |
| MS.gene90814.t1 | AT2G37130 | 35.786 | 299 | 181 | 7 | 13 | 304 | 2 | 296 | 2.33e-53 | 177 |
| MS.gene90814.t1 | AT4G37520 | 38.065 | 310 | 163 | 12 | 8 | 300 | 25 | 322 | 9.18e-53 | 176 |
| MS.gene90814.t1 | AT5G24070 | 35.238 | 315 | 186 | 8 | 3 | 305 | 28 | 336 | 1.22e-52 | 176 |
| MS.gene90814.t1 | AT4G17690 | 37.000 | 300 | 178 | 8 | 10 | 302 | 26 | 321 | 4.53e-51 | 172 |
| MS.gene90814.t1 | AT4G21960 | 35.831 | 307 | 185 | 7 | 6 | 304 | 25 | 327 | 4.71e-51 | 172 |
| MS.gene90814.t1 | AT4G37530 | 38.403 | 263 | 139 | 8 | 6 | 252 | 23 | 278 | 6.14e-51 | 170 |
| MS.gene90814.t1 | AT3G17070 | 35.535 | 318 | 179 | 8 | 4 | 304 | 31 | 339 | 9.65e-50 | 169 |
| MS.gene90814.t1 | AT5G22410 | 33.010 | 309 | 190 | 8 | 3 | 301 | 21 | 322 | 5.67e-49 | 166 |
| MS.gene90814.t1 | AT4G25980 | 42.604 | 169 | 94 | 2 | 8 | 176 | 69 | 234 | 4.00e-41 | 144 |
| MS.gene90814.t1 | AT5G39580 | 43.169 | 183 | 96 | 3 | 14 | 196 | 29 | 203 | 6.58e-39 | 137 |
| MS.gene90814.t1 | AT2G24800 | 41.146 | 192 | 100 | 5 | 8 | 196 | 29 | 210 | 1.49e-36 | 131 |
| MS.gene90814.t1 | AT3G17070 | 34.201 | 269 | 151 | 8 | 52 | 304 | 18 | 276 | 6.41e-36 | 130 |
| MS.gene90814.t1 | AT3G42570 | 35.374 | 147 | 81 | 4 | 33 | 176 | 14 | 149 | 3.41e-16 | 74.7 |
| MS.gene90814.t1 | AT4G32320 | 26.545 | 275 | 133 | 10 | 26 | 283 | 97 | 319 | 1.58e-12 | 67.8 |
Find 56 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAATTGTACGAACAGCTTT+TGG | 0.248258 | 1.4:+87931566 | None:intergenic |
| GAAGAAATGGTTACTTTATC+AGG | 0.253613 | 1.4:-87930806 | MS.gene90814:intron |
| CACTCTGATCAACAACTATT+TGG | 0.263540 | 1.4:-87929921 | MS.gene90814:CDS |
| TTCGGCTGTGAAACCTTTCT+TGG | 0.264682 | 1.4:+87930826 | None:intergenic |
| AAGGCCATCAAGATTCAAAA+AGG | 0.295453 | 1.4:+87930862 | None:intergenic |
| TACAATTAGGAAAGCAGTTC+AGG | 0.312689 | 1.4:-87931552 | MS.gene90814:CDS |
| TCTTGGCGAAAGCAGTAATA+AGG | 0.313799 | 1.4:+87930843 | None:intergenic |
| CAAAAGCTGTTCGTACAATT+AGG | 0.330721 | 1.4:-87931565 | MS.gene90814:CDS |
| CCTCTCAGCGAATTTGCGTT+TGG | 0.333568 | 1.4:+87931185 | None:intergenic |
| CTCTCAGCGAATTTGCGTTT+GGG | 0.337491 | 1.4:+87931186 | None:intergenic |
| GAGTTATCAGCTAATTTCTA+TGG | 0.342682 | 1.4:-87931599 | MS.gene90814:CDS |
| CTATTAATTACATGTATGAT+TGG | 0.345529 | 1.4:-87931638 | None:intergenic |
| TGATCAGGTGCTCACACAAT+AGG | 0.350317 | 1.4:-87930143 | MS.gene90814:intron |
| TCTTCTTACTTGAGCGTTTG+TGG | 0.357638 | 1.4:+87929887 | None:intergenic |
| CCAAAACTTGTTGAAAAGTA+AGG | 0.368077 | 1.4:-87929952 | MS.gene90814:CDS |
| CAAAGATGGAATGTACTATT+AGG | 0.369687 | 1.4:-87930938 | MS.gene90814:CDS |
| TAAGCAGTGGTAGTGTTTGA+TGG | 0.370648 | 1.4:+87929741 | None:intergenic |
| TCAATGCTTAGTCCACTTAC+TGG | 0.377441 | 1.4:-87929807 | MS.gene90814:CDS |
| TGATAAAGTAACCATTTCTT+CGG | 0.412644 | 1.4:+87930808 | None:intergenic |
| ACATCTTAGCCCTTGCTGCT+AGG | 0.420580 | 1.4:-87931094 | MS.gene90814:CDS |
| AGATGACATCAAATCTCAAT+TGG | 0.429687 | 1.4:-87931150 | MS.gene90814:CDS |
| AGGTTTCACAGCCGAAGAAA+TGG | 0.443774 | 1.4:-87930819 | MS.gene90814:CDS |
| ATTACTGCTTTCGCCAAGAA+AGG | 0.453887 | 1.4:-87930839 | MS.gene90814:CDS |
| AGTCCACTTACTGGCATTGA+AGG | 0.460678 | 1.4:-87929798 | MS.gene90814:CDS |
| TCACCTTCAATGCCAGTAAG+TGG | 0.469881 | 1.4:+87929795 | None:intergenic |
| CATCTTAGCCCTTGCTGCTA+GGG | 0.473688 | 1.4:-87931093 | MS.gene90814:CDS |
| TCAGAACAAGAGACAGTATT+GGG | 0.477115 | 1.4:+87931116 | None:intergenic |
| GAACAAAGCAGTCATGGAAA+TGG | 0.478577 | 1.4:+87931483 | None:intergenic |
| CTGGCATTGAAGGTGAAATC+AGG | 0.481698 | 1.4:-87929788 | MS.gene90814:CDS |
| GATCAACAACTATTTGGTAA+TGG | 0.497432 | 1.4:-87929915 | MS.gene90814:CDS |
| AGAAGATATAGCAGAAGCAT+GGG | 0.506186 | 1.4:-87929870 | MS.gene90814:CDS |
| TTGATGGAGCATTGACGAAA+TGG | 0.506430 | 1.4:+87929757 | None:intergenic |
| TATTAATTACATGTATGATT+GGG | 0.510374 | 1.4:-87931637 | None:intergenic |
| TTACTTGAACAAAGCAGTCA+TGG | 0.513127 | 1.4:+87931477 | None:intergenic |
| AAGAAGATATAGCAGAAGCA+TGG | 0.514686 | 1.4:-87929871 | MS.gene90814:CDS |
| TATAGCTTGGTGGACAAAGA+TGG | 0.515315 | 1.4:-87930952 | MS.gene90814:intron |
| GATCAGGTGCTCACACAATA+GGG | 0.525526 | 1.4:-87930142 | MS.gene90814:intron |
| GACGACACATCAAATTTCAC+AGG | 0.527948 | 1.4:-87931224 | MS.gene90814:CDS |
| CGTGGTGTCGAGGAGTCAAA+AGG | 0.540660 | 1.4:+87930002 | None:intergenic |
| CAAAACTTGTTGAAAAGTAA+GGG | 0.557870 | 1.4:-87929951 | MS.gene90814:CDS |
| GTCAGAACAAGAGACAGTAT+TGG | 0.568320 | 1.4:+87931115 | None:intergenic |
| TTAGCCCTTGCTGCTAGGGA+CGG | 0.572382 | 1.4:-87931089 | MS.gene90814:CDS |
| CAACACCGTCCCTAGCAGCA+AGG | 0.580793 | 1.4:+87931084 | None:intergenic |
| ATGATGTATATATAGCTTGG+TGG | 0.584991 | 1.4:-87930962 | MS.gene90814:intron |
| AACACCGTCCCTAGCAGCAA+GGG | 0.585075 | 1.4:+87931085 | None:intergenic |
| ATCATGAGGACGTGGTGTCG+AGG | 0.586699 | 1.4:+87929992 | None:intergenic |
| TGACATCAAATCTCAATTGG+AGG | 0.589015 | 1.4:-87931147 | MS.gene90814:CDS |
| GATTAATTTAATTTAAGCAG+TGG | 0.594474 | 1.4:+87929728 | None:intergenic |
| CCAAACGCAAATTCGCTGAG+AGG | 0.600916 | 1.4:-87931185 | MS.gene90814:CDS |
| TGCTAGGGACGGTGTTGCTG+AGG | 0.615933 | 1.4:-87931078 | MS.gene90814:intron |
| TGTTAAGAATGAGAGTCGCA+TGG | 0.618020 | 1.4:-87931525 | MS.gene90814:CDS |
| CTCACACAATAGGGCTAGTG+AGG | 0.619880 | 1.4:-87930133 | MS.gene90814:CDS |
| ATGGAAATGGAGTCTAAGCA+AGG | 0.625587 | 1.4:+87931496 | None:intergenic |
| GTTAAGAATGAGAGTCGCAT+GGG | 0.627549 | 1.4:-87931524 | MS.gene90814:CDS |
| TTATCAAAATCATGAGGACG+TGG | 0.652723 | 1.4:+87929984 | None:intergenic |
| TAACCATTATCAAAATCATG+AGG | 0.665603 | 1.4:+87929978 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATCAAATTACATTAATTAT+CGG | - | chr1.4:87930602-87930621 | MS.gene90814:intron | 15.0% |
| !!! | AATAGTATATAACATTTTGA+TGG | - | chr1.4:87931190-87931209 | MS.gene90814:CDS | 15.0% |
| !!! | ATATACTATTAATGACATTT+TGG | + | chr1.4:87931180-87931199 | None:intergenic | 15.0% |
| !! | ATCAATTAATATTGAACGAA+GGG | - | chr1.4:87930851-87930870 | MS.gene90814:CDS | 20.0% |
| !! | CGATAATTAATGTAATTTGA+TGG | + | chr1.4:87930604-87930623 | None:intergenic | 20.0% |
| !! | GTTGTTTGATTAAGATAAAA+TGG | + | chr1.4:87930998-87931017 | None:intergenic | 20.0% |
| !! | TAAATGATGTATATATAGCT+TGG | - | chr1.4:87930398-87930417 | MS.gene90814:intron | 20.0% |
| !! | TATCAATTAATATTGAACGA+AGG | - | chr1.4:87930850-87930869 | MS.gene90814:CDS | 20.0% |
| ! | TAACCATTATCAAAATCATG+AGG | + | chr1.4:87931388-87931407 | None:intergenic | 25.0% |
| ! | TAATTTGATGGAGTAATCAA+GGG | + | chr1.4:87930592-87930611 | None:intergenic | 25.0% |
| ! | TCAATTAATATTGAACGAAG+GGG | - | chr1.4:87930852-87930871 | MS.gene90814:CDS | 25.0% |
| ! | TGATAAAGTAACCATTTCTT+CGG | + | chr1.4:87930558-87930577 | None:intergenic | 25.0% |
| !!! | CAAAACTTGTTGAAAAGTAA+GGG | - | chr1.4:87931412-87931431 | MS.gene90814:intron | 25.0% |
| AAATGTGATCACATGTACAT+GGG | - | chr1.4:87931142-87931161 | MS.gene90814:CDS | 30.0% | |
| AGATGACATCAAATCTCAAT+TGG | - | chr1.4:87930213-87930232 | MS.gene90814:intron | 30.0% | |
| AGGTGTCAATTAATATGAGA+AGG | + | chr1.4:87930650-87930669 | None:intergenic | 30.0% | |
| ATGATGTATATATAGCTTGG+TGG | - | chr1.4:87930401-87930420 | MS.gene90814:intron | 30.0% | |
| CAAAGATGGAATGTACTATT+AGG | - | chr1.4:87930425-87930444 | MS.gene90814:intron | 30.0% | |
| GAGTTATCAGCTAATTTCTA+TGG | - | chr1.4:87929764-87929783 | MS.gene90814:CDS | 30.0% | |
| GATCAACAACTATTTGGTAA+TGG | - | chr1.4:87931448-87931467 | MS.gene90814:intron | 30.0% | |
| GCATGAAGTTATATGCATTT+AGG | + | chr1.4:87931034-87931053 | None:intergenic | 30.0% | |
| GCATTATTTCAATAAGACAG+TGG | - | chr1.4:87930890-87930909 | MS.gene90814:CDS | 30.0% | |
| GTAATTTGATGGAGTAATCA+AGG | + | chr1.4:87930593-87930612 | None:intergenic | 30.0% | |
| GTACAATATACATACATGCA+GGG | - | chr1.4:87930094-87930113 | MS.gene90814:CDS | 30.0% | |
| TAAATGTGATCACATGTACA+TGG | - | chr1.4:87931141-87931160 | MS.gene90814:CDS | 30.0% | |
| TGAATAATGCATGTAGTCAA+AGG | + | chr1.4:87930670-87930689 | None:intergenic | 30.0% | |
| TGTACAATATACATACATGC+AGG | - | chr1.4:87930093-87930112 | MS.gene90814:CDS | 30.0% | |
| ! | GAAGAAATGGTTACTTTATC+AGG | - | chr1.4:87930557-87930576 | MS.gene90814:intron | 30.0% |
| !! | CCAAAACTTGTTGAAAAGTA+AGG | - | chr1.4:87931411-87931430 | MS.gene90814:intron | 30.0% |
| !! | CCTTACTTTTCAACAAGTTT+TGG | + | chr1.4:87931414-87931433 | None:intergenic | 30.0% |
| !!! | TTTGATGGTTTTGTTTGATC+AGG | - | chr1.4:87931205-87931224 | MS.gene90814:CDS | 30.0% |
| AAGAAGATATAGCAGAAGCA+TGG | - | chr1.4:87931492-87931511 | MS.gene90814:CDS | 35.0% | |
| AAGGCCATCAAGATTCAAAA+AGG | + | chr1.4:87930504-87930523 | None:intergenic | 35.0% | |
| AGGCCATCAAGATTCAAAAA+GGG | + | chr1.4:87930503-87930522 | None:intergenic | 35.0% | |
| CAAAAGCTGTTCGTACAATT+AGG | - | chr1.4:87929798-87929817 | MS.gene90814:CDS | 35.0% | |
| CACTCTGATCAACAACTATT+TGG | - | chr1.4:87931442-87931461 | MS.gene90814:intron | 35.0% | |
| TACAATTAGGAAAGCAGTTC+AGG | - | chr1.4:87929811-87929830 | MS.gene90814:CDS | 35.0% | |
| TCAGAACAAGAGACAGTATT+GGG | + | chr1.4:87930250-87930269 | None:intergenic | 35.0% | |
| TGACATCAAATCTCAATTGG+AGG | - | chr1.4:87930216-87930235 | MS.gene90814:intron | 35.0% | |
| TTACTTGAACAAAGCAGTCA+TGG | + | chr1.4:87929889-87929908 | None:intergenic | 35.0% | |
| TTATCAAAATCATGAGGACG+TGG | + | chr1.4:87931382-87931401 | None:intergenic | 35.0% | |
| ! | AGAAGATATAGCAGAAGCAT+GGG | - | chr1.4:87931493-87931512 | MS.gene90814:CDS | 35.0% |
| ! | CTAATTGTACGAACAGCTTT+TGG | + | chr1.4:87929800-87929819 | None:intergenic | 35.0% |
| ! | GTGTTTGACTTTCATACATG+TGG | + | chr1.4:87931059-87931078 | None:intergenic | 35.0% |
| ! | TTATCAGAGTCTTTTTCCCT+CGG | - | chr1.4:87930022-87930041 | MS.gene90814:CDS | 35.0% |
| !! | CGTCCTCATGATTTTGATAA+TGG | - | chr1.4:87931382-87931401 | MS.gene90814:intron | 35.0% |
| ATGGAAATGGAGTCTAAGCA+AGG | + | chr1.4:87929870-87929889 | None:intergenic | 40.0% | |
| ATTACTGCTTTCGCCAAGAA+AGG | - | chr1.4:87930524-87930543 | MS.gene90814:intron | 40.0% | |
| GAACAAAGCAGTCATGGAAA+TGG | + | chr1.4:87929883-87929902 | None:intergenic | 40.0% | |
| GACGACACATCAAATTTCAC+AGG | - | chr1.4:87930139-87930158 | MS.gene90814:CDS | 40.0% | |
| GCATTTAGGTGACACATCTA+TGG | + | chr1.4:87931020-87931039 | None:intergenic | 40.0% | |
| GTCAGAACAAGAGACAGTAT+TGG | + | chr1.4:87930251-87930270 | None:intergenic | 40.0% | |
| GTTAAGAATGAGAGTCGCAT+GGG | - | chr1.4:87929839-87929858 | MS.gene90814:CDS | 40.0% | |
| TCAAGATTCAAAAAGGGAGC+AGG | + | chr1.4:87930497-87930516 | None:intergenic | 40.0% | |
| TCAATGCTTAGTCCACTTAC+TGG | - | chr1.4:87931556-87931575 | MS.gene90814:CDS | 40.0% | |
| TCTTCTTACTTGAGCGTTTG+TGG | + | chr1.4:87931479-87931498 | None:intergenic | 40.0% | |
| TCTTGGCGAAAGCAGTAATA+AGG | + | chr1.4:87930523-87930542 | None:intergenic | 40.0% | |
| TGTTAAGAATGAGAGTCGCA+TGG | - | chr1.4:87929838-87929857 | MS.gene90814:CDS | 40.0% | |
| ! | GCTCCCTTTTTGAATCTTGA+TGG | - | chr1.4:87930497-87930516 | MS.gene90814:intron | 40.0% |
| ! | TAAGCAGTGGTAGTGTTTGA+TGG | + | chr1.4:87931625-87931644 | None:intergenic | 40.0% |
| ! | TATAGCTTGGTGGACAAAGA+TGG | - | chr1.4:87930411-87930430 | MS.gene90814:intron | 40.0% |
| ! | TGCATTTTTGCAGCAAATGC+TGG | + | chr1.4:87931301-87931320 | None:intergenic | 40.0% |
| !! | TTGATGGAGCATTGACGAAA+TGG | + | chr1.4:87931609-87931628 | None:intergenic | 40.0% |
| AGGTTTCACAGCCGAAGAAA+TGG | - | chr1.4:87930544-87930563 | MS.gene90814:intron | 45.0% | |
| CACATGTACATGGGTCGTAT+TGG | - | chr1.4:87931151-87931170 | MS.gene90814:CDS | 45.0% | |
| CTCTCAGCGAATTTGCGTTT+GGG | + | chr1.4:87930180-87930199 | None:intergenic | 45.0% | |
| GATCAGGTGCTCACACAATA+GGG | - | chr1.4:87931221-87931240 | MS.gene90814:CDS | 45.0% | |
| TCACCTTCAATGCCAGTAAG+TGG | + | chr1.4:87931571-87931590 | None:intergenic | 45.0% | |
| TGATCAGGTGCTCACACAAT+AGG | - | chr1.4:87931220-87931239 | MS.gene90814:CDS | 45.0% | |
| TGTCATCACCCCCTTCAAAA+GGG | + | chr1.4:87931333-87931352 | None:intergenic | 45.0% | |
| TTCGGCTGTGAAACCTTTCT+TGG | + | chr1.4:87930540-87930559 | None:intergenic | 45.0% | |
| TTGTCATCACCCCCTTCAAA+AGG | + | chr1.4:87931334-87931353 | None:intergenic | 45.0% | |
| ! | AGTCCACTTACTGGCATTGA+AGG | - | chr1.4:87931565-87931584 | MS.gene90814:CDS | 45.0% |
| ! | CTGGCATTGAAGGTGAAATC+AGG | - | chr1.4:87931575-87931594 | MS.gene90814:CDS | 45.0% |
| !! | AAGCAGAGTGCCCTTTTGAA+GGG | - | chr1.4:87931320-87931339 | MS.gene90814:intron | 45.0% |
| !! | GGTGCAGATTTTTCAGAGCA+AGG | - | chr1.4:87931251-87931270 | MS.gene90814:CDS | 45.0% |
| !! | TTTTCCCTCGGATTCGAGTT+AGG | - | chr1.4:87930034-87930053 | MS.gene90814:CDS | 45.0% |
| ACACCAAACACGACACATCG+AGG | - | chr1.4:87931075-87931094 | MS.gene90814:intron | 50.0% | |
| ACATCTTAGCCCTTGCTGCT+AGG | - | chr1.4:87930269-87930288 | MS.gene90814:intron | 50.0% | |
| ATGCCTCGATGTGTCGTGTT+TGG | + | chr1.4:87931081-87931100 | None:intergenic | 50.0% | |
| CATCTTAGCCCTTGCTGCTA+GGG | - | chr1.4:87930270-87930289 | MS.gene90814:intron | 50.0% | |
| CCAAACGCAAATTCGCTGAG+AGG | - | chr1.4:87930178-87930197 | MS.gene90814:intron | 50.0% | |
| CCTCTCAGCGAATTTGCGTT+TGG | + | chr1.4:87930181-87930200 | None:intergenic | 50.0% | |
| GTCTCCTAACTCGAATCCGA+GGG | + | chr1.4:87930041-87930060 | None:intergenic | 50.0% | |
| TGTCTCCTAACTCGAATCCG+AGG | + | chr1.4:87930042-87930061 | None:intergenic | 50.0% | |
| ! | CTCACACAATAGGGCTAGTG+AGG | - | chr1.4:87931230-87931249 | MS.gene90814:CDS | 50.0% |
| !! | AGCAGAGTGCCCTTTTGAAG+GGG | - | chr1.4:87931321-87931340 | MS.gene90814:intron | 50.0% |
| !! | CAAGCAGAGTGCCCTTTTGA+AGG | - | chr1.4:87931319-87931338 | MS.gene90814:intron | 50.0% |
| AACACCGTCCCTAGCAGCAA+GGG | + | chr1.4:87930281-87930300 | None:intergenic | 55.0% | |
| TTAGCCCTTGCTGCTAGGGA+CGG | - | chr1.4:87930274-87930293 | MS.gene90814:intron | 55.0% | |
| ! | ATCATGAGGACGTGGTGTCG+AGG | + | chr1.4:87931374-87931393 | None:intergenic | 55.0% |
| ! | CGTGGTGTCGAGGAGTCAAA+AGG | + | chr1.4:87931364-87931383 | None:intergenic | 55.0% |
| !! | GCAGAGTGCCCTTTTGAAGG+GGG | - | chr1.4:87931322-87931341 | MS.gene90814:intron | 55.0% |
| CAACACCGTCCCTAGCAGCA+AGG | + | chr1.4:87930282-87930301 | None:intergenic | 60.0% | |
| !! | TGCTAGGGACGGTGTTGCTG+AGG | - | chr1.4:87930285-87930304 | MS.gene90814:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 87929740 | 87931645 | 87929740 | ID=MS.gene90814 |
| chr1.4 | mRNA | 87929740 | 87931645 | 87929740 | ID=MS.gene90814.t1;Parent=MS.gene90814 |
| chr1.4 | exon | 87931481 | 87931645 | 87931481 | ID=MS.gene90814.t1.exon1;Parent=MS.gene90814.t1 |
| chr1.4 | CDS | 87931481 | 87931645 | 87931481 | ID=cds.MS.gene90814.t1;Parent=MS.gene90814.t1 |
| chr1.4 | exon | 87931079 | 87931270 | 87931079 | ID=MS.gene90814.t1.exon2;Parent=MS.gene90814.t1 |
| chr1.4 | CDS | 87931079 | 87931270 | 87931079 | ID=cds.MS.gene90814.t1;Parent=MS.gene90814.t1 |
| chr1.4 | exon | 87930807 | 87930969 | 87930807 | ID=MS.gene90814.t1.exon3;Parent=MS.gene90814.t1 |
| chr1.4 | CDS | 87930807 | 87930969 | 87930807 | ID=cds.MS.gene90814.t1;Parent=MS.gene90814.t1 |
| chr1.4 | exon | 87929740 | 87930158 | 87929740 | ID=MS.gene90814.t1.exon4;Parent=MS.gene90814.t1 |
| chr1.4 | CDS | 87929740 | 87930158 | 87929740 | ID=cds.MS.gene90814.t1;Parent=MS.gene90814.t1 |
| Gene Sequence |
| Protein sequence |
