Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93632.t1 | XP_003619743.2 | 92.2 | 205 | 15 | 1 | 1 | 205 | 1 | 204 | 2.80E-105 | 391.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93632.t1 | O82711 | 51.2 | 209 | 94 | 7 | 1 | 205 | 1 | 205 | 7.2e-46 | 185.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93632.t1 | G7KP86 | 92.2 | 205 | 15 | 1 | 1 | 205 | 1 | 204 | 2.0e-105 | 391.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene93632 | 0.833424 | 5.38E-56 | -1.69E-46 |
| MS.gene049549 | MS.gene93632 | 0.841008 | 6.17E-58 | -1.69E-46 |
| MS.gene050329 | MS.gene93632 | 0.801335 | 9.45E-49 | -1.69E-46 |
| MS.gene051996 | MS.gene93632 | 0.808967 | 2.39E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene93632 | 0.802696 | 4.96E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene93632 | 0.831737 | 1.41E-55 | -1.69E-46 |
| MS.gene052212 | MS.gene93632 | 0.80199 | 6.94E-49 | -1.69E-46 |
| MS.gene052223 | MS.gene93632 | 0.801756 | 7.75E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene93632 | 0.818789 | 1.63E-52 | -1.69E-46 |
| MS.gene053403 | MS.gene93632 | 0.806582 | 7.67E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene93632 | 0.827124 | 1.86E-54 | -1.69E-46 |
| MS.gene054146 | MS.gene93632 | 0.832009 | 1.21E-55 | -1.69E-46 |
| MS.gene054277 | MS.gene93632 | 0.807845 | 4.14E-50 | -1.69E-46 |
| MS.gene054742 | MS.gene93632 | 0.834903 | 2.29E-56 | -1.69E-46 |
| MS.gene055240 | MS.gene93632 | 0.808275 | 3.36E-50 | -1.69E-46 |
| MS.gene056330 | MS.gene93632 | 0.833338 | 5.65E-56 | -1.69E-46 |
| MS.gene056590 | MS.gene93632 | 0.814325 | 1.63E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene93632 | 0.814072 | 1.86E-51 | -1.69E-46 |
| MS.gene056920 | MS.gene93632 | 0.836125 | 1.12E-56 | -1.69E-46 |
| MS.gene056922 | MS.gene93632 | 0.802979 | 4.34E-49 | -1.69E-46 |
| MS.gene056923 | MS.gene93632 | 0.821621 | 3.66E-53 | -1.69E-46 |
| MS.gene057544 | MS.gene93632 | 0.802987 | 4.32E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene93632 | 0.800125 | 1.67E-48 | -1.69E-46 |
| MS.gene058218 | MS.gene93632 | 0.814344 | 1.62E-51 | -1.69E-46 |
| MS.gene059043 | MS.gene93632 | 0.8098 | 1.58E-50 | -1.69E-46 |
| MS.gene059402 | MS.gene93632 | 0.802217 | 6.23E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene93632 | 0.813159 | 2.95E-51 | -1.69E-46 |
| MS.gene060087 | MS.gene93632 | 0.860866 | 1.53E-63 | -1.69E-46 |
| MS.gene060098 | MS.gene93632 | 0.808148 | 3.57E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93632.t1 | MTR_6g065460 | 92.195 | 205 | 15 | 1 | 1 | 205 | 1 | 204 | 2.41e-128 | 360 |
| MS.gene93632.t1 | MTR_6g065460 | 82.439 | 205 | 11 | 1 | 1 | 205 | 1 | 180 | 4.84e-108 | 308 |
| MS.gene93632.t1 | MTR_6g059650 | 65.128 | 195 | 58 | 6 | 19 | 210 | 20 | 207 | 2.24e-79 | 236 |
| MS.gene93632.t1 | MTR_3g463590 | 56.284 | 183 | 71 | 4 | 27 | 205 | 26 | 203 | 1.85e-62 | 193 |
| MS.gene93632.t1 | MTR_6g059530 | 52.404 | 208 | 85 | 6 | 1 | 206 | 1 | 196 | 2.98e-54 | 172 |
| MS.gene93632.t1 | MTR_6g059760 | 50.237 | 211 | 92 | 9 | 1 | 206 | 1 | 203 | 2.25e-52 | 168 |
| MS.gene93632.t1 | MTR_6g059410 | 52.632 | 209 | 82 | 8 | 1 | 206 | 1 | 195 | 1.26e-51 | 166 |
| MS.gene93632.t1 | MTR_6g059730 | 50.739 | 203 | 94 | 5 | 6 | 206 | 7 | 205 | 4.87e-50 | 162 |
| MS.gene93632.t1 | MTR_6g045097 | 43.128 | 211 | 109 | 7 | 1 | 205 | 1 | 206 | 1.19e-45 | 151 |
| MS.gene93632.t1 | MTR_6g044780 | 42.925 | 212 | 110 | 7 | 1 | 206 | 1 | 207 | 1.35e-45 | 151 |
| MS.gene93632.t1 | MTR_6g044810 | 43.333 | 210 | 108 | 7 | 1 | 204 | 1 | 205 | 1.59e-45 | 150 |
| MS.gene93632.t1 | MTR_6g017225 | 47.596 | 208 | 95 | 7 | 6 | 205 | 7 | 208 | 4.48e-45 | 154 |
| MS.gene93632.t1 | MTR_6g045403 | 42.584 | 209 | 111 | 5 | 1 | 205 | 1 | 204 | 7.95e-45 | 149 |
| MS.gene93632.t1 | MTR_6g059680 | 49.495 | 198 | 90 | 6 | 15 | 206 | 16 | 209 | 1.75e-44 | 148 |
| MS.gene93632.t1 | MTR_6g045433 | 40.758 | 211 | 102 | 6 | 7 | 203 | 8 | 209 | 1.70e-39 | 135 |
| MS.gene93632.t1 | MTR_6g066190 | 42.453 | 212 | 107 | 8 | 1 | 206 | 1 | 203 | 6.26e-38 | 131 |
| MS.gene93632.t1 | MTR_6g066210 | 42.180 | 211 | 111 | 6 | 1 | 206 | 1 | 205 | 6.58e-38 | 131 |
| MS.gene93632.t1 | MTR_6g059810 | 43.062 | 209 | 101 | 10 | 4 | 202 | 8 | 208 | 2.83e-37 | 129 |
| MS.gene93632.t1 | MTR_6g009650 | 41.706 | 211 | 110 | 7 | 1 | 206 | 1 | 203 | 9.50e-37 | 127 |
| MS.gene93632.t1 | MTR_6g009563 | 39.906 | 213 | 112 | 8 | 1 | 206 | 1 | 204 | 9.65e-33 | 117 |
| MS.gene93632.t1 | MTR_1g035770 | 37.383 | 214 | 123 | 7 | 6 | 211 | 7 | 217 | 4.27e-31 | 114 |
| MS.gene93632.t1 | MTR_6g065570 | 77.778 | 63 | 14 | 0 | 14 | 76 | 11 | 73 | 2.31e-29 | 105 |
| MS.gene93632.t1 | MTR_6g059755 | 50.877 | 114 | 49 | 5 | 96 | 206 | 11 | 120 | 5.45e-28 | 103 |
| MS.gene93632.t1 | MTR_1g057110 | 36.279 | 215 | 100 | 11 | 1 | 206 | 1 | 187 | 2.62e-27 | 102 |
| MS.gene93632.t1 | MTR_6g078100 | 37.209 | 215 | 115 | 11 | 1 | 205 | 1 | 205 | 6.82e-25 | 97.1 |
| MS.gene93632.t1 | MTR_6g078070 | 35.814 | 215 | 116 | 11 | 1 | 205 | 1 | 203 | 1.05e-24 | 96.7 |
| MS.gene93632.t1 | MTR_6g078290 | 34.722 | 216 | 120 | 9 | 1 | 202 | 1 | 209 | 1.06e-23 | 94.4 |
| MS.gene93632.t1 | MTR_6g078140 | 32.000 | 200 | 114 | 8 | 21 | 205 | 21 | 213 | 1.65e-17 | 77.8 |
| MS.gene93632.t1 | MTR_6g078120 | 32.000 | 200 | 114 | 8 | 21 | 205 | 21 | 213 | 4.24e-17 | 76.6 |
| MS.gene93632.t1 | MTR_3g106585 | 33.491 | 212 | 111 | 12 | 5 | 206 | 7 | 198 | 1.51e-15 | 72.4 |
| MS.gene93632.t1 | MTR_3g106620 | 30.108 | 186 | 111 | 8 | 28 | 206 | 27 | 200 | 3.11e-15 | 71.6 |
| MS.gene93632.t1 | MTR_2g073010 | 28.713 | 202 | 128 | 7 | 7 | 205 | 10 | 198 | 2.43e-14 | 68.9 |
| MS.gene93632.t1 | MTR_0302s0030 | 28.856 | 201 | 134 | 6 | 7 | 202 | 3 | 199 | 1.05e-13 | 67.4 |
| MS.gene93632.t1 | MTR_3g014870 | 28.293 | 205 | 127 | 8 | 5 | 202 | 9 | 200 | 7.20e-13 | 65.1 |
| MS.gene93632.t1 | MTR_6g078280 | 29.293 | 198 | 122 | 9 | 21 | 205 | 20 | 212 | 2.80e-12 | 63.5 |
| MS.gene93632.t1 | MTR_3g014820 | 27.805 | 205 | 128 | 8 | 5 | 202 | 9 | 200 | 4.51e-12 | 63.2 |
| MS.gene93632.t1 | MTR_2g072980 | 28.643 | 199 | 133 | 7 | 7 | 205 | 10 | 199 | 6.24e-12 | 62.4 |
| MS.gene93632.t1 | MTR_8g059790 | 26.601 | 203 | 137 | 8 | 6 | 202 | 5 | 201 | 8.97e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93632.t1 | AT1G17860 | 33.824 | 204 | 122 | 8 | 4 | 205 | 3 | 195 | 1.86e-21 | 88.2 |
| MS.gene93632.t1 | AT1G73260 | 31.429 | 210 | 131 | 7 | 1 | 207 | 8 | 207 | 1.10e-20 | 86.3 |
| MS.gene93632.t1 | AT1G73325 | 31.884 | 207 | 126 | 9 | 4 | 205 | 7 | 203 | 6.85e-18 | 79.3 |
Find 59 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATCATGCCATCAATCTT+TGG | 0.296622 | 6.2:+70707884 | MS.gene93632:CDS |
| CCTAGCCTGCTAAACTTTAC+AGG | 0.305071 | 6.2:-70708001 | None:intergenic |
| GGGAGGCATGATGACTTTAC+TGG | 0.309229 | 6.2:+70708289 | MS.gene93632:CDS |
| TGTTGATGCCTCTCTCAAAA+TGG | 0.313339 | 6.2:+70708357 | MS.gene93632:CDS |
| CCTGGTGCTTGTTATGATAT+TGG | 0.331841 | 6.2:+70708268 | MS.gene93632:CDS |
| TGACTTTACTGGAAGGCTTC+TGG | 0.336007 | 6.2:+70708300 | MS.gene93632:CDS |
| CTGGTGCTTGTTATGATATT+GGG | 0.341631 | 6.2:+70708269 | MS.gene93632:CDS |
| GGTAAGGAATGTAGGTTTCA+TGG | 0.342364 | 6.2:-70707750 | None:intergenic |
| TACTGGAAGGCTTCTGGTCC+TGG | 0.347355 | 6.2:+70708306 | MS.gene93632:CDS |
| GAAGGTAAGCATATTATAGA+TGG | 0.366110 | 6.2:+70708175 | MS.gene93632:CDS |
| ATCAACAAATACAACTTCAT+AGG | 0.388203 | 6.2:-70708341 | None:intergenic |
| CTTGGAGGATTCAGCACACT+TGG | 0.412692 | 6.2:-70708083 | None:intergenic |
| CCAGGTGGGGCAGTGATAGA+TGG | 0.414356 | 6.2:-70708250 | None:intergenic |
| CCAGCTGCTCCAAAGATTGA+TGG | 0.422912 | 6.2:-70707893 | None:intergenic |
| ATCTTTGGAGCAGCTGGTGG+TGG | 0.441234 | 6.2:+70707899 | MS.gene93632:CDS |
| GAACAAGTTATTGACACAAA+TGG | 0.443270 | 6.2:+70707833 | MS.gene93632:CDS |
| CCATCTATCACTGCCCCACC+TGG | 0.453523 | 6.2:+70708250 | MS.gene93632:CDS |
| AAAGAAAGGGTAAGGAATGT+AGG | 0.459147 | 6.2:-70707758 | None:intergenic |
| CCATCAATCTTTGGAGCAGC+TGG | 0.460514 | 6.2:+70707893 | MS.gene93632:CDS |
| ACTGGACCATGGGTGGGTAT+TGG | 0.466256 | 6.2:+70708136 | MS.gene93632:CDS |
| GAGCAGCTGGTGGTGGATTG+AGG | 0.467057 | 6.2:+70707906 | MS.gene93632:CDS |
| GTCTGCCTGTAAAGTTTAGC+AGG | 0.472799 | 6.2:+70707996 | MS.gene93632:CDS |
| GGACCATGGGTGGGTATTGG+TGG | 0.483131 | 6.2:+70708139 | MS.gene93632:CDS |
| TGGACAGAACACAAACTTGT+AGG | 0.486171 | 6.2:-70708230 | None:intergenic |
| CCTGTAAAGTTTAGCAGGCT+AGG | 0.493193 | 6.2:+70708001 | MS.gene93632:CDS |
| GATTATTCCGAGGTTGTCAA+TGG | 0.494338 | 6.2:+70707974 | MS.gene93632:CDS |
| CATAGGGATCATTATTAGCC+AGG | 0.494704 | 6.2:-70708324 | None:intergenic |
| TAACAAATTAACTGGACCAT+GGG | 0.499496 | 6.2:+70708126 | MS.gene93632:CDS |
| AGAGAAGCAAAGAAAGGGTA+AGG | 0.502150 | 6.2:-70707766 | None:intergenic |
| CAAATTAACTGGACCATGGG+TGG | 0.513850 | 6.2:+70708129 | MS.gene93632:CDS |
| ATGCAAAGAGAAGCAAAGAA+AGG | 0.517116 | 6.2:-70707772 | None:intergenic |
| TGCAAAGAGAAGCAAAGAAA+GGG | 0.522946 | 6.2:-70707771 | None:intergenic |
| TGCAAAAGCTAATGAAAAGC+AGG | 0.523206 | 6.2:-70707801 | None:intergenic |
| ATCATCAACCAACACCCACT+TGG | 0.538112 | 6.2:-70708101 | None:intergenic |
| TCAACAAATACAACTTCATA+GGG | 0.541440 | 6.2:-70708340 | None:intergenic |
| AAGTTTAGCAGGCTAGGTGC+AGG | 0.543812 | 6.2:+70708007 | MS.gene93632:CDS |
| ATCAACCAACACCCACTTGG+AGG | 0.563736 | 6.2:-70708098 | None:intergenic |
| TGAATCCTCCAAGTGGGTGT+TGG | 0.564748 | 6.2:+70708093 | MS.gene93632:CDS |
| TTGGAGGATTCAGCACACTT+GGG | 0.577442 | 6.2:-70708082 | None:intergenic |
| TTAACAAATTAACTGGACCA+TGG | 0.578865 | 6.2:+70708125 | MS.gene93632:CDS |
| ATGATATAGAATCTGCCACC+AGG | 0.579132 | 6.2:-70707869 | None:intergenic |
| GGTGGTACTGAAGATAATGA+AGG | 0.579997 | 6.2:+70708157 | MS.gene93632:CDS |
| ATCATAACAAGCACCAGGTG+GGG | 0.587156 | 6.2:-70708263 | None:intergenic |
| CCAATATCATAACAAGCACC+AGG | 0.593116 | 6.2:-70708268 | None:intergenic |
| TCAATCTTTGGAGCAGCTGG+TGG | 0.597041 | 6.2:+70707896 | MS.gene93632:CDS |
| TAATCTTGAAGTACAGTCAG+TGG | 0.598215 | 6.2:-70707956 | None:intergenic |
| TATCATAACAAGCACCAGGT+GGG | 0.615337 | 6.2:-70708264 | None:intergenic |
| GCTGGTGGTGGATTGAGGCT+TGG | 0.621479 | 6.2:+70707911 | MS.gene93632:CDS |
| GTTGTAAATGCGATATCAAG+TGG | 0.626836 | 6.2:-70708055 | None:intergenic |
| AGGCAGACCATTGACAACCT+CGG | 0.627216 | 6.2:-70707981 | None:intergenic |
| AAATTAACTGGACCATGGGT+GGG | 0.632486 | 6.2:+70708130 | MS.gene93632:CDS |
| GTGCTTGTTATGATATTGGG+AGG | 0.648866 | 6.2:+70708272 | MS.gene93632:CDS |
| GTACCACCAATACCCACCCA+TGG | 0.653889 | 6.2:-70708142 | None:intergenic |
| GGCATGATGACTTTACTGGA+AGG | 0.654511 | 6.2:+70708293 | MS.gene93632:CDS |
| TGTACTTCAAGATTATTCCG+AGG | 0.664559 | 6.2:+70707964 | MS.gene93632:CDS |
| GTGTGCTGAATCCTCCAAGT+GGG | 0.697546 | 6.2:+70708087 | MS.gene93632:CDS |
| ATATCATAACAAGCACCAGG+TGG | 0.697776 | 6.2:-70708265 | None:intergenic |
| AAAAGCTAATGAAAAGCAGG+TGG | 0.699196 | 6.2:-70707798 | None:intergenic |
| AGTGTGCTGAATCCTCCAAG+TGG | 0.756355 | 6.2:+70708086 | MS.gene93632:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTTAAAATTCAAAAACA+TGG | + | chr6.2:70708199-70708218 | MS.gene93632:CDS | 15.0% |
| !!! | GATGATTTTAACAAATTAAC+TGG | + | chr6.2:70708118-70708137 | MS.gene93632:CDS | 20.0% |
| ! | ATCAACAAATACAACTTCAT+AGG | - | chr6.2:70708344-70708363 | None:intergenic | 25.0% |
| ! | TCAACAAATACAACTTCATA+GGG | - | chr6.2:70708343-70708362 | None:intergenic | 25.0% |
| GAACAAGTTATTGACACAAA+TGG | + | chr6.2:70707833-70707852 | MS.gene93632:CDS | 30.0% | |
| GAAGGTAAGCATATTATAGA+TGG | + | chr6.2:70708175-70708194 | MS.gene93632:CDS | 30.0% | |
| TAACAAATTAACTGGACCAT+GGG | + | chr6.2:70708126-70708145 | MS.gene93632:CDS | 30.0% | |
| TATATCATGCCATCAATCTT+TGG | + | chr6.2:70707884-70707903 | MS.gene93632:CDS | 30.0% | |
| TTAACAAATTAACTGGACCA+TGG | + | chr6.2:70708125-70708144 | MS.gene93632:CDS | 30.0% | |
| AAAAGCTAATGAAAAGCAGG+TGG | - | chr6.2:70707801-70707820 | None:intergenic | 35.0% | |
| AAAGAAAGGGTAAGGAATGT+AGG | - | chr6.2:70707761-70707780 | None:intergenic | 35.0% | |
| ATGCAAAGAGAAGCAAAGAA+AGG | - | chr6.2:70707775-70707794 | None:intergenic | 35.0% | |
| GTTGTAAATGCGATATCAAG+TGG | - | chr6.2:70708058-70708077 | None:intergenic | 35.0% | |
| TAATCTTGAAGTACAGTCAG+TGG | - | chr6.2:70707959-70707978 | None:intergenic | 35.0% | |
| TGCAAAAGCTAATGAAAAGC+AGG | - | chr6.2:70707804-70707823 | None:intergenic | 35.0% | |
| TGCAAAGAGAAGCAAAGAAA+GGG | - | chr6.2:70707774-70707793 | None:intergenic | 35.0% | |
| TGTACTTCAAGATTATTCCG+AGG | + | chr6.2:70707964-70707983 | MS.gene93632:CDS | 35.0% | |
| !! | AAGATCTTCCATTTTGAGAG+AGG | - | chr6.2:70708368-70708387 | None:intergenic | 35.0% |
| !! | AATGGAAACCCTATTTTTCC+TGG | + | chr6.2:70707851-70707870 | MS.gene93632:CDS | 35.0% |
| !! | CTGGTGCTTGTTATGATATT+GGG | + | chr6.2:70708269-70708288 | MS.gene93632:CDS | 35.0% |
| AAATTAACTGGACCATGGGT+GGG | + | chr6.2:70708130-70708149 | MS.gene93632:CDS | 40.0% | |
| AATCTGCCACCAGGAAAAAT+AGG | - | chr6.2:70707863-70707882 | None:intergenic | 40.0% | |
| AGAGAAGCAAAGAAAGGGTA+AGG | - | chr6.2:70707769-70707788 | None:intergenic | 40.0% | |
| ATATCATAACAAGCACCAGG+TGG | - | chr6.2:70708268-70708287 | None:intergenic | 40.0% | |
| ATCTGCCACCAGGAAAAATA+GGG | - | chr6.2:70707862-70707881 | None:intergenic | 40.0% | |
| ATGATATAGAATCTGCCACC+AGG | - | chr6.2:70707872-70707891 | None:intergenic | 40.0% | |
| CATAGGGATCATTATTAGCC+AGG | - | chr6.2:70708327-70708346 | None:intergenic | 40.0% | |
| CCAATATCATAACAAGCACC+AGG | - | chr6.2:70708271-70708290 | None:intergenic | 40.0% | |
| GATTATTCCGAGGTTGTCAA+TGG | + | chr6.2:70707974-70707993 | MS.gene93632:CDS | 40.0% | |
| TATCATAACAAGCACCAGGT+GGG | - | chr6.2:70708267-70708286 | None:intergenic | 40.0% | |
| TGGACAGAACACAAACTTGT+AGG | - | chr6.2:70708233-70708252 | None:intergenic | 40.0% | |
| TGTTGATGCCTCTCTCAAAA+TGG | + | chr6.2:70708357-70708376 | MS.gene93632:CDS | 40.0% | |
| ! | GGTGGTACTGAAGATAATGA+AGG | + | chr6.2:70708157-70708176 | MS.gene93632:CDS | 40.0% |
| !! | CCTGGTGCTTGTTATGATAT+TGG | + | chr6.2:70708268-70708287 | MS.gene93632:CDS | 40.0% |
| !! | GTGCTTGTTATGATATTGGG+AGG | + | chr6.2:70708272-70708291 | MS.gene93632:CDS | 40.0% |
| ATCATAACAAGCACCAGGTG+GGG | - | chr6.2:70708266-70708285 | None:intergenic | 45.0% | |
| ATCATCAACCAACACCCACT+TGG | - | chr6.2:70708104-70708123 | None:intergenic | 45.0% | |
| CAAATTAACTGGACCATGGG+TGG | + | chr6.2:70708129-70708148 | MS.gene93632:CDS | 45.0% | |
| CCTAGCCTGCTAAACTTTAC+AGG | - | chr6.2:70708004-70708023 | None:intergenic | 45.0% | |
| CCTGTAAAGTTTAGCAGGCT+AGG | + | chr6.2:70708001-70708020 | MS.gene93632:CDS | 45.0% | |
| GGCATGATGACTTTACTGGA+AGG | + | chr6.2:70708293-70708312 | MS.gene93632:CDS | 45.0% | |
| GTCTGCCTGTAAAGTTTAGC+AGG | + | chr6.2:70707996-70708015 | MS.gene93632:CDS | 45.0% | |
| TGACTTTACTGGAAGGCTTC+TGG | + | chr6.2:70708300-70708319 | MS.gene93632:CDS | 45.0% | |
| TTGGAGGATTCAGCACACTT+GGG | - | chr6.2:70708085-70708104 | None:intergenic | 45.0% | |
| !! | GGAAACCCTATTTTTCCTGG+TGG | + | chr6.2:70707854-70707873 | MS.gene93632:CDS | 45.0% |
| AAGTTTAGCAGGCTAGGTGC+AGG | + | chr6.2:70708007-70708026 | MS.gene93632:CDS | 50.0% | |
| AGGCAGACCATTGACAACCT+CGG | - | chr6.2:70707984-70708003 | None:intergenic | 50.0% | |
| AGTGTGCTGAATCCTCCAAG+TGG | + | chr6.2:70708086-70708105 | MS.gene93632:CDS | 50.0% | |
| ATCAACCAACACCCACTTGG+AGG | - | chr6.2:70708101-70708120 | None:intergenic | 50.0% | |
| CCAGCTGCTCCAAAGATTGA+TGG | - | chr6.2:70707896-70707915 | None:intergenic | 50.0% | |
| CTTGGAGGATTCAGCACACT+TGG | - | chr6.2:70708086-70708105 | None:intergenic | 50.0% | |
| GTGTGCTGAATCCTCCAAGT+GGG | + | chr6.2:70708087-70708106 | MS.gene93632:CDS | 50.0% | |
| TGAATCCTCCAAGTGGGTGT+TGG | + | chr6.2:70708093-70708112 | MS.gene93632:CDS | 50.0% | |
| ! | GGGAGGCATGATGACTTTAC+TGG | + | chr6.2:70708289-70708308 | MS.gene93632:CDS | 50.0% |
| !! | CCATCAATCTTTGGAGCAGC+TGG | + | chr6.2:70707893-70707912 | MS.gene93632:CDS | 50.0% |
| !! | TCAATCTTTGGAGCAGCTGG+TGG | + | chr6.2:70707896-70707915 | MS.gene93632:CDS | 50.0% |
| ACTGGACCATGGGTGGGTAT+TGG | + | chr6.2:70708136-70708155 | MS.gene93632:CDS | 55.0% | |
| GTACCACCAATACCCACCCA+TGG | - | chr6.2:70708145-70708164 | None:intergenic | 55.0% | |
| TACTGGAAGGCTTCTGGTCC+TGG | + | chr6.2:70708306-70708325 | MS.gene93632:CDS | 55.0% | |
| !! | ATCTTTGGAGCAGCTGGTGG+TGG | + | chr6.2:70707899-70707918 | MS.gene93632:CDS | 55.0% |
| CCAGGTGGGGCAGTGATAGA+TGG | - | chr6.2:70708253-70708272 | None:intergenic | 60.0% | |
| CCATCTATCACTGCCCCACC+TGG | + | chr6.2:70708250-70708269 | MS.gene93632:CDS | 60.0% | |
| !! | GAGCAGCTGGTGGTGGATTG+AGG | + | chr6.2:70707906-70707925 | MS.gene93632:CDS | 60.0% |
| !! | GCTGGTGGTGGATTGAGGCT+TGG | + | chr6.2:70707911-70707930 | MS.gene93632:CDS | 60.0% |
| !! | GGACCATGGGTGGGTATTGG+TGG | + | chr6.2:70708139-70708158 | MS.gene93632:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 70707752 | 70708390 | 70707752 | ID=MS.gene93632 |
| chr6.2 | mRNA | 70707752 | 70708390 | 70707752 | ID=MS.gene93632.t1;Parent=MS.gene93632 |
| chr6.2 | exon | 70707752 | 70708390 | 70707752 | ID=MS.gene93632.t1.exon1;Parent=MS.gene93632.t1 |
| chr6.2 | CDS | 70707752 | 70708390 | 70707752 | ID=cds.MS.gene93632.t1;Parent=MS.gene93632.t1 |
| Gene Sequence |
| Protein sequence |
