Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93985.t1 | XP_003619856.1 | 91.8 | 159 | 1 | 1 | 1 | 147 | 72 | 230 | 8.40E-77 | 296.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93985.t1 | Q9LE73 | 55.4 | 157 | 53 | 4 | 1 | 141 | 40 | 195 | 4.4e-42 | 172.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93985.t1 | G7KQ94 | 91.8 | 159 | 1 | 1 | 1 | 147 | 72 | 230 | 6.0e-77 | 296.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049208 | MS.gene93985 | 0.803023 | 4.25E-49 | -1.69E-46 |
| MS.gene049264 | MS.gene93985 | 0.816917 | 4.32E-52 | -1.69E-46 |
| MS.gene049786 | MS.gene93985 | 0.819684 | 1.02E-52 | -1.69E-46 |
| MS.gene050253 | MS.gene93985 | 0.832054 | 1.18E-55 | -1.69E-46 |
| MS.gene050439 | MS.gene93985 | 0.811394 | 7.16E-51 | -1.69E-46 |
| MS.gene051492 | MS.gene93985 | 0.805175 | 1.52E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene93985 | 0.834931 | 2.25E-56 | -1.69E-46 |
| MS.gene051948 | MS.gene93985 | 0.802298 | 5.99E-49 | -1.69E-46 |
| MS.gene053298 | MS.gene93985 | 0.845413 | 4.12E-59 | -1.69E-46 |
| MS.gene053340 | MS.gene93985 | 0.846491 | 2.10E-59 | -1.69E-46 |
| MS.gene053963 | MS.gene93985 | 0.802788 | 4.75E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene93985 | 0.80606 | 9.88E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene93985 | 0.820613 | 6.25E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene93985 | 0.825978 | 3.49E-54 | -1.69E-46 |
| MS.gene056638 | MS.gene93985 | 0.803088 | 4.12E-49 | -1.69E-46 |
| MS.gene056901 | MS.gene93985 | 0.816354 | 5.77E-52 | -1.69E-46 |
| MS.gene057155 | MS.gene93985 | 0.80369 | 3.09E-49 | -1.69E-46 |
| MS.gene058526 | MS.gene93985 | 0.815235 | 1.03E-51 | -1.69E-46 |
| MS.gene058527 | MS.gene93985 | 0.817457 | 3.27E-52 | -1.69E-46 |
| MS.gene058528 | MS.gene93985 | 0.816372 | 5.72E-52 | -1.69E-46 |
| MS.gene059774 | MS.gene93985 | 0.823027 | 1.73E-53 | -1.69E-46 |
| MS.gene060697 | MS.gene93985 | 0.824102 | 9.68E-54 | -1.69E-46 |
| MS.gene060879 | MS.gene93985 | 0.817375 | 3.41E-52 | -1.69E-46 |
| MS.gene061047 | MS.gene93985 | 0.805298 | 1.43E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93985.t1 | MTR_6g070920 | 91.824 | 159 | 1 | 1 | 1 | 147 | 72 | 230 | 4.45e-105 | 299 |
| MS.gene93985.t1 | MTR_6g070920 | 87.407 | 135 | 5 | 1 | 1 | 123 | 72 | 206 | 5.16e-83 | 243 |
| MS.gene93985.t1 | MTR_3g065330 | 55.696 | 158 | 53 | 4 | 1 | 142 | 10 | 166 | 3.17e-54 | 169 |
| MS.gene93985.t1 | MTR_1g032290 | 54.717 | 159 | 56 | 4 | 1 | 144 | 1 | 158 | 8.86e-54 | 167 |
| MS.gene93985.t1 | MTR_8g105140 | 54.037 | 161 | 58 | 4 | 1 | 146 | 1 | 160 | 2.06e-53 | 166 |
| MS.gene93985.t1 | MTR_5g078020 | 51.656 | 151 | 55 | 3 | 8 | 142 | 16 | 164 | 5.82e-46 | 148 |
| MS.gene93985.t1 | MTR_6g070920 | 81.319 | 91 | 5 | 1 | 1 | 79 | 72 | 162 | 1.46e-45 | 146 |
| MS.gene93985.t1 | MTR_3g065330 | 55.556 | 135 | 43 | 4 | 1 | 119 | 32 | 165 | 4.65e-43 | 140 |
| MS.gene93985.t1 | MTR_8g039690 | 41.509 | 159 | 72 | 3 | 2 | 139 | 1 | 159 | 1.78e-33 | 116 |
| MS.gene93985.t1 | MTR_7g084380 | 42.331 | 163 | 70 | 4 | 2 | 140 | 1 | 163 | 1.80e-32 | 114 |
| MS.gene93985.t1 | MTR_7g084380 | 40.288 | 139 | 59 | 4 | 26 | 140 | 21 | 159 | 2.40e-23 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93985.t1 | AT1G18300 | 55.414 | 157 | 53 | 4 | 1 | 141 | 40 | 195 | 2.26e-55 | 172 |
| MS.gene93985.t1 | AT1G73540 | 55.414 | 157 | 53 | 4 | 1 | 143 | 41 | 194 | 3.93e-53 | 167 |
| MS.gene93985.t1 | AT1G14860 | 55.128 | 156 | 55 | 3 | 1 | 142 | 1 | 155 | 8.93e-53 | 165 |
| MS.gene93985.t1 | AT2G01670 | 50.932 | 161 | 64 | 3 | 1 | 147 | 6 | 165 | 3.50e-50 | 159 |
| MS.gene93985.t1 | AT1G12880 | 42.169 | 166 | 69 | 4 | 2 | 140 | 1 | 166 | 5.44e-33 | 115 |
| MS.gene93985.t1 | AT3G26690 | 40.120 | 167 | 72 | 4 | 2 | 140 | 1 | 167 | 8.81e-30 | 107 |
| MS.gene93985.t1 | AT3G26690 | 40.120 | 167 | 72 | 4 | 2 | 140 | 1 | 167 | 8.81e-30 | 107 |
| MS.gene93985.t1 | AT3G12600 | 43.750 | 160 | 67 | 4 | 2 | 138 | 1 | 160 | 1.86e-26 | 98.2 |
| MS.gene93985.t1 | AT3G12600 | 43.243 | 148 | 61 | 4 | 14 | 138 | 4 | 151 | 1.81e-22 | 87.8 |
Find 33 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTCTTATGTTCATTTC+TGG | 0.092026 | 6.2:+73517402 | None:intergenic |
| TGCAGAGTAATTTGGGTAAA+TGG | 0.215433 | 6.2:-73517506 | MS.gene93985:intron |
| TGAACATAAGAAGAAGAAAA+TGG | 0.253808 | 6.2:-73517395 | MS.gene93985:CDS |
| ATAGAAGAAGCTGGAGTTAT+TGG | 0.256499 | 6.2:-73517641 | MS.gene93985:CDS |
| AATAACTCCAGCTTCTTCTA+TGG | 0.282235 | 6.2:+73517643 | None:intergenic |
| TTAGCAAGGAGTTGGATAAT+TGG | 0.322855 | 6.2:-73517425 | MS.gene93985:CDS |
| GAAGGAAGCTTTAGATGAAT+TGG | 0.336584 | 6.2:-73516989 | MS.gene93985:CDS |
| ACCTAAAACTTAGATTGAAT+TGG | 0.341917 | 6.2:+73516954 | None:intergenic |
| TGCAAATGTCTACCAGTTCT+AGG | 0.360990 | 6.2:+73518383 | None:intergenic |
| GCTTCCTTCATCCAAGCATA+TGG | 0.390570 | 6.2:+73517003 | None:intergenic |
| AAGAAATATGCCCATATGCT+TGG | 0.435806 | 6.2:-73517014 | MS.gene93985:CDS |
| TGTTTGGTTTCTCCTAGAAC+TGG | 0.445974 | 6.2:-73518395 | MS.gene93985:CDS |
| ATTGGAGAATATGATGTGTT+TGG | 0.449206 | 6.2:-73518411 | None:intergenic |
| GAACATAAGAAGAAGAAAAT+GGG | 0.454169 | 6.2:-73517394 | MS.gene93985:intron |
| GTTCCCTTTGCTTGTTAGCA+AGG | 0.472162 | 6.2:-73517439 | MS.gene93985:CDS |
| TTTGCTTGTTAGCAAGGAGT+TGG | 0.481309 | 6.2:-73517433 | MS.gene93985:CDS |
| AAAGAATGGAACTCAAGAAA+AGG | 0.494824 | 6.2:-73517771 | MS.gene93985:CDS |
| TCTCAAAGCAGCTTGTTCCA+TGG | 0.496073 | 6.2:+73517670 | None:intergenic |
| AGAGAAACCATAGAAGAAGC+TGG | 0.505150 | 6.2:-73517650 | MS.gene93985:CDS |
| AACTCAAGAAAAGGAAATAG+AGG | 0.509278 | 6.2:-73517762 | MS.gene93985:CDS |
| AACTCCTTGCTAACAAGCAA+AGG | 0.516565 | 6.2:+73517435 | None:intergenic |
| CTTCCTTCATCCAAGCATAT+GGG | 0.522789 | 6.2:+73517004 | None:intergenic |
| ACAAGGATGTCGTCAAGTTG+TGG | 0.541451 | 6.2:-73518351 | MS.gene93985:CDS |
| CATGTATCCTTCATGCATAG+TGG | 0.542137 | 6.2:+73517461 | None:intergenic |
| CAAGGATGTCGTCAAGTTGT+GGG | 0.550727 | 6.2:-73518350 | MS.gene93985:CDS |
| ACTCCTTGCTAACAAGCAAA+GGG | 0.551729 | 6.2:+73517436 | None:intergenic |
| ATGCCCATATGCTTGGATGA+AGG | 0.557447 | 6.2:-73517007 | MS.gene93985:CDS |
| ATCCTTCATGCATAGTGGGT+TGG | 0.562217 | 6.2:+73517466 | None:intergenic |
| ATGTATCCTTCATGCATAGT+GGG | 0.569535 | 6.2:+73517462 | None:intergenic |
| CATTTGCAACGTTATGAACA+AGG | 0.571762 | 6.2:-73518368 | MS.gene93985:CDS |
| CGCCAACCCACTATGCATGA+AGG | 0.576057 | 6.2:-73517468 | MS.gene93985:CDS |
| AAGGATGTCGTCAAGTTGTG+GGG | 0.655005 | 6.2:-73518349 | MS.gene93985:intron |
| TGTAATCATGCAGTTGACTG+TGG | 0.660929 | 6.2:-73517046 | MS.gene93985:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATAAAAGTTGAATAT+AGG | + | chr6.2:73518011-73518030 | None:intergenic | 10.0% |
| !!! | ATTTTTCATGAAATAATATT+TGG | - | chr6.2:73517797-73517816 | MS.gene93985:intron | 10.0% |
| !!! | GAAATTTTTTGAAATTTTTA+AGG | - | chr6.2:73517287-73517306 | MS.gene93985:intron | 10.0% |
| !!! | TTTTTTTTTTTTTCTCAATT+GGG | - | chr6.2:73517220-73517239 | MS.gene93985:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTCTCAAT+TGG | - | chr6.2:73517219-73517238 | MS.gene93985:intron | 10.0% |
| !! | TTACAAATGAAAGAAATATT+AGG | + | chr6.2:73518303-73518322 | None:intergenic | 15.0% |
| !!! | AAAATTTTGAATTGAATATG+AGG | - | chr6.2:73517173-73517192 | MS.gene93985:intron | 15.0% |
| !!! | AAATTTTGAATTGAATATGA+GGG | - | chr6.2:73517174-73517193 | MS.gene93985:intron | 15.0% |
| !!! | AAGTTTTGATTTTTAAGATT+TGG | - | chr6.2:73517331-73517350 | MS.gene93985:intron | 15.0% |
| !!! | AATTTGAATTTGATTTATGA+GGG | - | chr6.2:73517501-73517520 | MS.gene93985:CDS | 15.0% |
| !!! | GACAATTTATGAAATTTTTA+AGG | - | chr6.2:73517128-73517147 | MS.gene93985:intron | 15.0% |
| !!! | TAATTTGAATTTGATTTATG+AGG | - | chr6.2:73517500-73517519 | MS.gene93985:CDS | 15.0% |
| !!! | TGTAATAACTTTTTTAGATT+TGG | - | chr6.2:73517768-73517787 | MS.gene93985:CDS | 15.0% |
| !! | ATGATTCAACAATGAATAAA+AGG | + | chr6.2:73517436-73517455 | None:intergenic | 20.0% |
| !! | TCTTAATTAAGTAGCATTAT+TGG | - | chr6.2:73518250-73518269 | MS.gene93985:intron | 20.0% |
| !! | TGATTCAACAATGAATAAAA+GGG | + | chr6.2:73517435-73517454 | None:intergenic | 20.0% |
| !! | TTTATAAATGACACTTGATT+AGG | + | chr6.2:73518184-73518203 | None:intergenic | 20.0% |
| !! | TTTATTCATTGTTGAATCAT+TGG | - | chr6.2:73517436-73517455 | MS.gene93985:CDS | 20.0% |
| !!! | AAGTTTGGATTTTTATTGTT+TGG | - | chr6.2:73517250-73517269 | MS.gene93985:intron | 20.0% |
| !!! | ATATTGTGATTTGTTCTTAT+GGG | - | chr6.2:73517061-73517080 | MS.gene93985:intron | 20.0% |
| !!! | ATTTTTAAGGTTTTTTCAGT+TGG | - | chr6.2:73517300-73517319 | MS.gene93985:intron | 20.0% |
| !!! | GACAATTTTTGATAACTTTA+AGG | - | chr6.2:73517196-73517215 | MS.gene93985:intron | 20.0% |
| !!! | TTTTAAGGTTTTTCTCAATT+GGG | - | chr6.2:73517143-73517162 | MS.gene93985:intron | 20.0% |
| !!! | TTTTAATGTTTTTCTCAAGT+GGG | - | chr6.2:73517383-73517402 | MS.gene93985:intron | 20.0% |
| !!! | TTTTTAAGGTTTTTCTCAAT+TGG | - | chr6.2:73517142-73517161 | MS.gene93985:intron | 20.0% |
| !!! | TTTTTAAGGTTTTTTCAGTT+GGG | - | chr6.2:73517301-73517320 | MS.gene93985:intron | 20.0% |
| !!! | TTTTTAATGTTTTTCTCAAG+TGG | - | chr6.2:73517382-73517401 | MS.gene93985:intron | 20.0% |
| ! | AGATGAATTGACATTTGAAT+AGG | + | chr6.2:73518216-73518235 | None:intergenic | 25.0% |
| ! | CCTTATAGATACAAAAAGAA+TGG | - | chr6.2:73517579-73517598 | MS.gene93985:intron | 25.0% |
| ! | CTTATGGGTTTCTTAAAAAT+TGG | - | chr6.2:73517076-73517095 | MS.gene93985:intron | 25.0% |
| ! | GAACATAAGAAGAAGAAAAT+GGG | - | chr6.2:73517970-73517989 | MS.gene93985:intron | 25.0% |
| ! | TGAACATAAGAAGAAGAAAA+TGG | - | chr6.2:73517969-73517988 | MS.gene93985:intron | 25.0% |
| !! | CCATTCTTTTTGTATCTATA+AGG | + | chr6.2:73517582-73517601 | None:intergenic | 25.0% |
| !!! | AAAAAAGTATTATGTCTGAG+CGG | + | chr6.2:73518112-73518131 | None:intergenic | 25.0% |
| !!! | GATATTGTGATTTGTTCTTA+TGG | - | chr6.2:73517060-73517079 | MS.gene93985:intron | 25.0% |
| !!! | GTTAATCTAACTTTGTTTTG+TGG | - | chr6.2:73517532-73517551 | MS.gene93985:intron | 25.0% |
| !!! | TAACTTTGTTTTGTGGTTTT+TGG | - | chr6.2:73517539-73517558 | MS.gene93985:intron | 25.0% |
| !!! | TTTAAGGTTTTTCTCAATTG+GGG | - | chr6.2:73517144-73517163 | MS.gene93985:intron | 25.0% |
| !!! | TTTTAAGGTTTTTTCAGTTG+GGG | - | chr6.2:73517302-73517321 | MS.gene93985:intron | 25.0% |
| AAAGAATGGAACTCAAGAAA+AGG | - | chr6.2:73517593-73517612 | MS.gene93985:intron | 30.0% | |
| AACTCAAGAAAAGGAAATAG+AGG | - | chr6.2:73517602-73517621 | MS.gene93985:intron | 30.0% | |
| CAATTGGGTTTCTTAAAGTT+TGG | - | chr6.2:73517235-73517254 | MS.gene93985:intron | 30.0% | |
| CTTCTTCTTATGTTCATTTC+TGG | + | chr6.2:73517965-73517984 | None:intergenic | 30.0% | |
| TTCATTGTTGAATCATTGGA+AGG | - | chr6.2:73517440-73517459 | MS.gene93985:CDS | 30.0% | |
| ! | CTTTTGATAAGTGCTCAAAA+GGG | - | chr6.2:73517627-73517646 | MS.gene93985:intron | 30.0% |
| ! | GTTTTCTTGCAGAGTAATTT+GGG | - | chr6.2:73517851-73517870 | MS.gene93985:intron | 30.0% |
| ! | TCTTTTGATAAGTGCTCAAA+AGG | - | chr6.2:73517626-73517645 | MS.gene93985:intron | 30.0% |
| ! | TGTTTTCTTGCAGAGTAATT+TGG | - | chr6.2:73517850-73517869 | MS.gene93985:intron | 30.0% |
| ! | TTGTTTGGAATTGTAGATGA+TGG | - | chr6.2:73517265-73517284 | MS.gene93985:intron | 30.0% |
| AAGAAATATGCCCATATGCT+TGG | - | chr6.2:73518350-73518369 | MS.gene93985:CDS | 35.0% | |
| AATAACTCCAGCTTCTTCTA+TGG | + | chr6.2:73517724-73517743 | None:intergenic | 35.0% | |
| ATAGAAGAAGCTGGAGTTAT+TGG | - | chr6.2:73517723-73517742 | MS.gene93985:intron | 35.0% | |
| ATGTATCCTTCATGCATAGT+GGG | + | chr6.2:73517905-73517924 | None:intergenic | 35.0% | |
| CATTTGCAACGTTATGAACA+AGG | - | chr6.2:73516996-73517015 | MS.gene93985:CDS | 35.0% | |
| TGCAGAGTAATTTGGGTAAA+TGG | - | chr6.2:73517858-73517877 | MS.gene93985:intron | 35.0% | |
| TTAGCAAGGAGTTGGATAAT+TGG | - | chr6.2:73517939-73517958 | MS.gene93985:intron | 35.0% | |
| TTGGGAAAAAGATGAAACCA+TGG | - | chr6.2:73517677-73517696 | MS.gene93985:CDS | 35.0% | |
| !! | GAAGGAAGCTTTAGATGAAT+TGG | - | chr6.2:73518375-73518394 | MS.gene93985:CDS | 35.0% |
| AACTCCTTGCTAACAAGCAA+AGG | + | chr6.2:73517932-73517951 | None:intergenic | 40.0% | |
| ACTCCTTGCTAACAAGCAAA+GGG | + | chr6.2:73517931-73517950 | None:intergenic | 40.0% | |
| AGAGAAACCATAGAAGAAGC+TGG | - | chr6.2:73517714-73517733 | MS.gene93985:intron | 40.0% | |
| AGTGGAATGCAGTTTCCAAA+AGG | - | chr6.2:73517651-73517670 | MS.gene93985:CDS | 40.0% | |
| ATAAGTGCTCAAAAGGGTAG+TGG | - | chr6.2:73517633-73517652 | MS.gene93985:CDS | 40.0% | |
| ATGACACTTGATTAGGCTCA+AGG | + | chr6.2:73518177-73518196 | None:intergenic | 40.0% | |
| CATGTATCCTTCATGCATAG+TGG | + | chr6.2:73517906-73517925 | None:intergenic | 40.0% | |
| CTTCCTTCATCCAAGCATAT+GGG | + | chr6.2:73518363-73518382 | None:intergenic | 40.0% | |
| TGCAAATGTCTACCAGTTCT+AGG | + | chr6.2:73516984-73517003 | None:intergenic | 40.0% | |
| TGTAATCATGCAGTTGACTG+TGG | - | chr6.2:73518318-73518337 | MS.gene93985:intron | 40.0% | |
| ! | TCTTTTTCCCAACCTCCTTT+TGG | + | chr6.2:73517669-73517688 | None:intergenic | 40.0% |
| ! | TGTTTGGTTTCTCCTAGAAC+TGG | - | chr6.2:73516969-73516988 | MS.gene93985:CDS | 40.0% |
| ! | TTTGCTTGTTAGCAAGGAGT+TGG | - | chr6.2:73517931-73517950 | MS.gene93985:intron | 40.0% |
| ATGCCCATATGCTTGGATGA+AGG | - | chr6.2:73518357-73518376 | MS.gene93985:CDS | 45.0% | |
| GCAGTTTCCAAAAGGAGGTT+GGG | - | chr6.2:73517659-73517678 | MS.gene93985:CDS | 45.0% | |
| GCTTCCTTCATCCAAGCATA+TGG | + | chr6.2:73518364-73518383 | None:intergenic | 45.0% | |
| GGAATGCAGTTTCCAAAAGG+AGG | - | chr6.2:73517654-73517673 | MS.gene93985:CDS | 45.0% | |
| TGCAGTTTCCAAAAGGAGGT+TGG | - | chr6.2:73517658-73517677 | MS.gene93985:CDS | 45.0% | |
| ! | AAGGATGTCGTCAAGTTGTG+GGG | - | chr6.2:73517015-73517034 | MS.gene93985:CDS | 45.0% |
| ! | ACAAGGATGTCGTCAAGTTG+TGG | - | chr6.2:73517013-73517032 | MS.gene93985:CDS | 45.0% |
| ! | CAAGGATGTCGTCAAGTTGT+GGG | - | chr6.2:73517014-73517033 | MS.gene93985:CDS | 45.0% |
| ! | GTTCCCTTTGCTTGTTAGCA+AGG | - | chr6.2:73517925-73517944 | MS.gene93985:intron | 45.0% |
| ! | TCTCAAAGCAGCTTGTTCCA+TGG | + | chr6.2:73517697-73517716 | None:intergenic | 45.0% |
| !! | ATCCTTCATGCATAGTGGGT+TGG | + | chr6.2:73517901-73517920 | None:intergenic | 45.0% |
| TTATGTCGCAGCGCAGATTG+AGG | - | chr6.2:73518130-73518149 | MS.gene93985:intron | 50.0% | |
| CGCCAACCCACTATGCATGA+AGG | - | chr6.2:73517896-73517915 | MS.gene93985:intron | 55.0% | |
| TGTCTGAGCGGCTACGATTG+AGG | + | chr6.2:73518100-73518119 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 73516963 | 73518423 | 73516963 | ID=MS.gene93985 |
| chr6.2 | mRNA | 73516963 | 73518423 | 73516963 | ID=MS.gene93985.t1;Parent=MS.gene93985 |
| chr6.2 | exon | 73518350 | 73518423 | 73518350 | ID=MS.gene93985.t1.exon1;Parent=MS.gene93985.t1 |
| chr6.2 | CDS | 73518350 | 73518423 | 73518350 | ID=cds.MS.gene93985.t1;Parent=MS.gene93985.t1 |
| chr6.2 | exon | 73517735 | 73517814 | 73517735 | ID=MS.gene93985.t1.exon2;Parent=MS.gene93985.t1 |
| chr6.2 | CDS | 73517735 | 73517814 | 73517735 | ID=cds.MS.gene93985.t1;Parent=MS.gene93985.t1 |
| chr6.2 | exon | 73517631 | 73517698 | 73517631 | ID=MS.gene93985.t1.exon3;Parent=MS.gene93985.t1 |
| chr6.2 | CDS | 73517631 | 73517698 | 73517631 | ID=cds.MS.gene93985.t1;Parent=MS.gene93985.t1 |
| chr6.2 | exon | 73517395 | 73517523 | 73517395 | ID=MS.gene93985.t1.exon4;Parent=MS.gene93985.t1 |
| chr6.2 | CDS | 73517395 | 73517523 | 73517395 | ID=cds.MS.gene93985.t1;Parent=MS.gene93985.t1 |
| chr6.2 | exon | 73516963 | 73517055 | 73516963 | ID=MS.gene93985.t1.exon5;Parent=MS.gene93985.t1 |
| chr6.2 | CDS | 73516963 | 73517055 | 73516963 | ID=cds.MS.gene93985.t1;Parent=MS.gene93985.t1 |
| Gene Sequence |
| Protein sequence |
