Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94406.t1 | KEH21585.1 | 72.1 | 752 | 65 | 3 | 22 | 628 | 168 | 919 | 7.40E-215 | 756.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94406.t1 | A0A072U6U7 | 72.1 | 752 | 65 | 3 | 22 | 628 | 168 | 919 | 5.3e-215 | 756.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene94406 | 0.817092 | 3.94E-52 | -1.69E-46 |
| MS.gene049341 | MS.gene94406 | 0.813165 | 2.94E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene94406 | 0.851483 | 8.62E-61 | -1.69E-46 |
| MS.gene049979 | MS.gene94406 | 0.821269 | 4.42E-53 | -1.69E-46 |
| MS.gene050020 | MS.gene94406 | 0.812835 | 3.47E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene94406 | 0.830039 | 3.68E-55 | -1.69E-46 |
| MS.gene050959 | MS.gene94406 | 0.804187 | 2.44E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene94406 | 0.822425 | 2.39E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene94406 | 0.803973 | 2.70E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene94406 | 0.830081 | 3.59E-55 | -1.69E-46 |
| MS.gene051719 | MS.gene94406 | 0.84172 | 4.00E-58 | -1.69E-46 |
| MS.gene051720 | MS.gene94406 | 0.814956 | 1.18E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene94406 | 0.813287 | 2.76E-51 | -1.69E-46 |
| MS.gene052133 | MS.gene94406 | 0.822613 | 2.16E-53 | -1.69E-46 |
| MS.gene052397 | MS.gene94406 | 0.805287 | 1.44E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene94406 | 0.839118 | 1.92E-57 | -1.69E-46 |
| MS.gene052611 | MS.gene94406 | 0.840289 | 9.51E-58 | -1.69E-46 |
| MS.gene052665 | MS.gene94406 | 0.827472 | 1.54E-54 | -1.69E-46 |
| MS.gene052732 | MS.gene94406 | 0.805303 | 1.43E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene94406 | 0.81957 | 1.08E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene94406 | 0.822275 | 2.58E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene94406 | 0.860656 | 1.77E-63 | -1.69E-46 |
| MS.gene053174 | MS.gene94406 | 0.808901 | 2.47E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene94406 | 0.843707 | 1.19E-58 | -1.69E-46 |
| MS.gene054550 | MS.gene94406 | 0.804343 | 2.26E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene94406 | 0.850183 | 2.00E-60 | -1.69E-46 |
| MS.gene05462 | MS.gene94406 | 0.817119 | 3.89E-52 | -1.69E-46 |
| MS.gene05478 | MS.gene94406 | 0.808378 | 3.19E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene94406 | 0.856875 | 2.39E-62 | -1.69E-46 |
| MS.gene055466 | MS.gene94406 | 0.863482 | 2.41E-64 | -1.69E-46 |
| MS.gene055468 | MS.gene94406 | 0.856038 | 4.21E-62 | -1.69E-46 |
| MS.gene055469 | MS.gene94406 | 0.813173 | 2.93E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene94406 | 0.818984 | 1.47E-52 | -1.69E-46 |
| MS.gene055580 | MS.gene94406 | -0.843303 | 1.52E-58 | -1.69E-46 |
| MS.gene055890 | MS.gene94406 | 0.802235 | 6.18E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene94406 | 0.839906 | 1.20E-57 | -1.69E-46 |
| MS.gene056043 | MS.gene94406 | -0.844119 | 9.21E-59 | -1.69E-46 |
| MS.gene056308 | MS.gene94406 | 0.803413 | 3.53E-49 | -1.69E-46 |
| MS.gene056432 | MS.gene94406 | 0.801533 | 8.61E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene94406 | 0.826816 | 2.20E-54 | -1.69E-46 |
| MS.gene056584 | MS.gene94406 | 0.804522 | 2.07E-49 | -1.69E-46 |
| MS.gene057057 | MS.gene94406 | 0.8112 | 7.88E-51 | -1.69E-46 |
| MS.gene058852 | MS.gene94406 | 0.82674 | 2.30E-54 | -1.69E-46 |
| MS.gene058906 | MS.gene94406 | 0.809651 | 1.70E-50 | -1.69E-46 |
| MS.gene059937 | MS.gene94406 | 0.829135 | 6.10E-55 | -1.69E-46 |
| MS.gene060194 | MS.gene94406 | 0.822055 | 2.91E-53 | -1.69E-46 |
| MS.gene060587 | MS.gene94406 | 0.863586 | 2.24E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94406.t1 | MTR_7g007880 | 81.316 | 471 | 70 | 2 | 22 | 477 | 168 | 635 | 0.0 | 759 |
| MS.gene94406.t1 | MTR_7g007880 | 54.990 | 511 | 138 | 14 | 164 | 628 | 455 | 919 | 5.06e-144 | 441 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 152 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAAATTGTTTCTCTAAAT+TGG | 0.146728 | 7.1:-86364742 | None:intergenic |
| GGTAAATATTTCAATGAAAA+TGG | 0.170433 | 7.1:+86364636 | MS.gene94406:CDS |
| GTGAGTGAAGATAGGGAATT+TGG | 0.171279 | 7.1:+86364705 | MS.gene94406:CDS |
| CAGATTAGGCTTCAGAAAAT+TGG | 0.197443 | 7.1:+86366574 | MS.gene94406:CDS |
| GGAAACATGCTGCACATTTA+AGG | 0.232974 | 7.1:+86365252 | MS.gene94406:CDS |
| TCCACACCCTTTGATGGTTC+TGG | 0.237883 | 7.1:-86366418 | None:intergenic |
| CGGTTTCCAAGTGGAAGATT+TGG | 0.247884 | 7.1:+86365565 | MS.gene94406:CDS |
| ATGGAGAGGGAGAAAGTTTA+TGG | 0.253068 | 7.1:+86364834 | MS.gene94406:CDS |
| AATGGAAGTGATTCGAGTTT+AGG | 0.267445 | 7.1:+86364654 | MS.gene94406:CDS |
| ACCGGTTCGAAGTTTGAAAT+TGG | 0.270312 | 7.1:+86364590 | MS.gene94406:CDS |
| GGTTATTCAGTTGGATTTGA+TGG | 0.281499 | 7.1:+86364435 | MS.gene94406:intron |
| GAATTTCCATGAGGTGGATT+TGG | 0.300356 | 7.1:+86365628 | MS.gene94406:CDS |
| TCTGAATATGTCAATGATTC+AGG | 0.305872 | 7.1:+86366496 | MS.gene94406:CDS |
| AGATAGGGAATTTGGGGATA+TGG | 0.328683 | 7.1:+86364713 | MS.gene94406:CDS |
| AGAGCCAGTGGATTGCCTTC+AGG | 0.329099 | 7.1:+86366184 | MS.gene94406:CDS |
| TGAGTGAAGATAGGGAATTT+GGG | 0.332634 | 7.1:+86364706 | MS.gene94406:CDS |
| AAAGTTTATGGCAATGATAA+TGG | 0.342619 | 7.1:+86364846 | MS.gene94406:CDS |
| TTCGCAGTTTAGGCCTCTTT+CGG | 0.342647 | 7.1:+86364872 | MS.gene94406:CDS |
| AAGTCTTCCACACCCTTTGA+TGG | 0.343754 | 7.1:-86366424 | None:intergenic |
| AAATTCATATCTTCAGAAAA+AGG | 0.344657 | 7.1:-86365611 | None:intergenic |
| AGGATTCAAAGAAGAGATTC+GGG | 0.347970 | 7.1:+86365176 | MS.gene94406:CDS |
| GGTTGGATGTGAGTGAAGAT+AGG | 0.353006 | 7.1:+86364697 | MS.gene94406:CDS |
| AACGAAACCTCATCATGATT+TGG | 0.365971 | 7.1:-86366370 | None:intergenic |
| TTCGGAAAATATGAATTTCC+AGG | 0.367259 | 7.1:+86365451 | MS.gene94406:CDS |
| TCATAAACCTCTCGGATTAC+CGG | 0.367581 | 7.1:+86364572 | MS.gene94406:CDS |
| GGTTTCCAAGTGGAAGATTT+GGG | 0.381927 | 7.1:+86365566 | MS.gene94406:CDS |
| CGCCTATTGACTGGAATTCA+AGG | 0.382086 | 7.1:+86364802 | MS.gene94406:CDS |
| ATAATGGTTCTTCGCAGTTT+AGG | 0.387328 | 7.1:+86364862 | MS.gene94406:CDS |
| AAGGATTCAAAGAAGAGATT+CGG | 0.388441 | 7.1:+86365175 | MS.gene94406:CDS |
| ATTGTTGTATCAACATTATC+CGG | 0.399267 | 7.1:-86366268 | None:intergenic |
| CTTCGCCTTCGCCTATTGAC+TGG | 0.400771 | 7.1:+86364793 | MS.gene94406:CDS |
| ACCAATTTCAAACTTCGAAC+CGG | 0.402025 | 7.1:-86364591 | None:intergenic |
| TCTTTGGTGACAACAATGTT+AGG | 0.406561 | 7.1:+86366626 | MS.gene94406:CDS |
| AATTGTTTCTCTAAATTGGC+AGG | 0.408452 | 7.1:-86364738 | None:intergenic |
| GGATTCCTATGTGCCTGCTT+TGG | 0.415904 | 7.1:+86365052 | MS.gene94406:CDS |
| GCAGCAGGCGAGGATCCACC+TGG | 0.417494 | 7.1:+86366064 | MS.gene94406:CDS |
| GAATTTCCAAGAGGAAGATA+TGG | 0.421942 | 7.1:+86365502 | MS.gene94406:CDS |
| GTTGAGTGTGGTGAGGTTGT+TGG | 0.423524 | 7.1:+86364549 | MS.gene94406:CDS |
| TGTGCTCCATATCTTCCTCT+TGG | 0.423735 | 7.1:-86365508 | None:intergenic |
| CGAAGTTTGAAATTGGTTGA+AGG | 0.426548 | 7.1:+86364597 | MS.gene94406:CDS |
| GAACTAATGTGATTCAATCT+TGG | 0.427598 | 7.1:+86364469 | MS.gene94406:CDS |
| TTTGTTCCACAACTTCCTCT+TGG | 0.428444 | 7.1:-86365406 | None:intergenic |
| GAGCCAGTGGATTGCCTTCA+GGG | 0.430324 | 7.1:+86366185 | MS.gene94406:CDS |
| GACTTCCCCTTTGCATACTT+CGG | 0.437419 | 7.1:+86365433 | MS.gene94406:CDS |
| ATCCCTTTGAATAGAAGATC+TGG | 0.441789 | 7.1:-86366319 | None:intergenic |
| GTTGATGAGACTAAGTTTGA+AGG | 0.446350 | 7.1:+86364894 | MS.gene94406:CDS |
| ATTGACTGGAATTCAAGGTT+TGG | 0.447923 | 7.1:+86364807 | MS.gene94406:CDS |
| TTTAATGATACTGCTGTTGA+TGG | 0.448372 | 7.1:+86364759 | MS.gene94406:CDS |
| AACAGAAGAATGGGTACTAA+AGG | 0.456756 | 7.1:+86365230 | MS.gene94406:CDS |
| GTCTAGCAAAAGCTCTATCA+AGG | 0.459498 | 7.1:+86366140 | MS.gene94406:CDS |
| GGATTTGATGGTGGAAATGA+TGG | 0.460705 | 7.1:+86364447 | MS.gene94406:CDS |
| GGTGATGCATGGTTTGCATT+CGG | 0.464325 | 7.1:+86366099 | MS.gene94406:CDS |
| GAGGCGTTCTTCTAAGAGGT+TGG | 0.470996 | 7.1:+86364680 | MS.gene94406:CDS |
| ATCAAAGGGTGTGGAAGACT+TGG | 0.473084 | 7.1:+86366426 | MS.gene94406:CDS |
| GAATTCAAGGTTTGGAAGGA+TGG | 0.475936 | 7.1:+86364815 | MS.gene94406:CDS |
| GATGACTTCAAGAGTAAAAG+TGG | 0.477583 | 7.1:+86366040 | MS.gene94406:intron |
| TTCTTCTGTTTCTTAAAGAA+CGG | 0.479257 | 7.1:-86365217 | None:intergenic |
| GAACCAGATCTTCTATTCAA+AGG | 0.481988 | 7.1:+86366316 | MS.gene94406:CDS |
| AACCAGATCTTCTATTCAAA+GGG | 0.482771 | 7.1:+86366317 | MS.gene94406:CDS |
| ACAGAAGAATGGGTACTAAA+GGG | 0.484475 | 7.1:+86365231 | MS.gene94406:CDS |
| GGATCAATTGAAAGATCAAA+AGG | 0.485031 | 7.1:+86366595 | MS.gene94406:CDS |
| GTTGTTGCTCAACCTTACTT+TGG | 0.489447 | 7.1:+86364522 | MS.gene94406:CDS |
| TTTGGCGACGAAAATTTCTC+AGG | 0.494445 | 7.1:+86365646 | MS.gene94406:CDS |
| GAGACTAAGTTTGAAGGACT+TGG | 0.494783 | 7.1:+86364900 | MS.gene94406:CDS |
| TCACAGTCTTTCCAGTCGAC+AGG | 0.495798 | 7.1:+86365317 | MS.gene94406:CDS |
| GTGATTCGAGTTTAGGTTCG+AGG | 0.496075 | 7.1:+86364661 | MS.gene94406:CDS |
| TTAGTCTCATCAACCGAAAG+AGG | 0.499913 | 7.1:-86364885 | None:intergenic |
| AAGTATGCATATCTTCCTCC+TGG | 0.500568 | 7.1:-86365469 | None:intergenic |
| GTTGGATGTGAGTGAAGATA+GGG | 0.500698 | 7.1:+86364698 | MS.gene94406:CDS |
| TCTTTAAGAAACAGAAGAAT+GGG | 0.500933 | 7.1:+86365221 | MS.gene94406:CDS |
| TTCGTTTGATTCGATTGCAT+CGG | 0.501417 | 7.1:+86364980 | MS.gene94406:CDS |
| AACCTTGAATTCCAGTCAAT+AGG | 0.501786 | 7.1:-86364804 | None:intergenic |
| TTCTTTAAGAAACAGAAGAA+TGG | 0.502989 | 7.1:+86365220 | MS.gene94406:CDS |
| AAGAAGAGATTCGGGGAAGA+AGG | 0.503884 | 7.1:+86365184 | MS.gene94406:CDS |
| AAGAGTAAAAGTGGGGCAGC+AGG | 0.504013 | 7.1:+86366049 | MS.gene94406:intron |
| TTTGTCCCAAATCTTCCACT+TGG | 0.505382 | 7.1:-86365571 | None:intergenic |
| CAATCACAAAACCCCATTTG+CGG | 0.508858 | 7.1:+86363965 | MS.gene94406:CDS |
| AAATCATGATGAGGTTTCGT+TGG | 0.512566 | 7.1:+86366372 | MS.gene94406:CDS |
| TAGCAAGCAAGCTGATGAAA+AGG | 0.513436 | 7.1:+86366231 | MS.gene94406:CDS |
| CCAGGTTCAAAGCTCAGATT+AGG | 0.514858 | 7.1:+86366560 | MS.gene94406:CDS |
| TAACAAGCTTGAGAGCCTCC+AGG | 0.518168 | 7.1:+86366450 | MS.gene94406:CDS |
| CACTCAACATTACCAAAGTA+AGG | 0.520937 | 7.1:-86364534 | None:intergenic |
| ATATGTCAATGATTCAGGAT+TGG | 0.521804 | 7.1:+86366501 | MS.gene94406:CDS |
| GCATCGGATAATATCAATAC+GGG | 0.522599 | 7.1:+86364996 | MS.gene94406:CDS |
| ACTGGAATTCAAGGTTTGGA+AGG | 0.526303 | 7.1:+86364811 | MS.gene94406:CDS |
| AAGGTTTGGAAGGATGGAGA+GGG | 0.526547 | 7.1:+86364821 | MS.gene94406:CDS |
| GTTCGAGGCGTTCTTCTAAG+AGG | 0.528027 | 7.1:+86364676 | MS.gene94406:CDS |
| CCTAATCTGAGCTTTGAACC+TGG | 0.530704 | 7.1:-86366560 | None:intergenic |
| TGAGTTTCATCAACAGACAT+TGG | 0.534052 | 7.1:-86365275 | None:intergenic |
| CATCTTCGTCCGAGCTACCC+TGG | 0.534803 | 7.1:-86366468 | None:intergenic |
| GTTTGCATTCGGACTCAGAC+AGG | 0.534931 | 7.1:+86366110 | MS.gene94406:CDS |
| AGATAAACCAGAACCATCAA+AGG | 0.535238 | 7.1:+86366411 | MS.gene94406:CDS |
| TGAGAGCCTCCAGGGTAGCT+CGG | 0.536419 | 7.1:+86366459 | MS.gene94406:CDS |
| TAAAAGTGGGGCAGCAGGCG+AGG | 0.536451 | 7.1:+86366054 | MS.gene94406:CDS |
| AAGCTAGTGAATTTATCGCC+AGG | 0.536727 | 7.1:+86366542 | MS.gene94406:CDS |
| TGCATCGGATAATATCAATA+CGG | 0.539163 | 7.1:+86364995 | MS.gene94406:CDS |
| ACCAGAACCATCAAAGGGTG+TGG | 0.544869 | 7.1:+86366417 | MS.gene94406:CDS |
| TCGTCGCCAAATCCACCTCA+TGG | 0.546164 | 7.1:-86365634 | None:intergenic |
| GTTGTTGGTCATAAACCTCT+CGG | 0.550238 | 7.1:+86364564 | MS.gene94406:CDS |
| ATCACCGACTCTTTGTTCCC+AGG | 0.551407 | 7.1:-86366082 | None:intergenic |
| GAAATTGGTTGAAGGAGAAG+TGG | 0.552332 | 7.1:+86364605 | MS.gene94406:CDS |
| AGATATGAATTTCCATGAGG+TGG | 0.552888 | 7.1:+86365622 | MS.gene94406:CDS |
| CGTCCCTGAAGGCAATCCAC+TGG | 0.554415 | 7.1:-86366188 | None:intergenic |
| AGAAATGAGACAACAGAATG+AGG | 0.555152 | 7.1:+86365031 | MS.gene94406:CDS |
| TTGCATGCTACAGAAAATGT+CGG | 0.555563 | 7.1:+86365545 | MS.gene94406:CDS |
| GTTTCTTAAAGAACGGCCCT+CGG | 0.558308 | 7.1:-86365210 | None:intergenic |
| CGCGAGAATGTATTCTTCGA+TGG | 0.559797 | 7.1:+86365355 | MS.gene94406:CDS |
| CAAGGTTTGGAAGGATGGAG+AGG | 0.561013 | 7.1:+86364820 | MS.gene94406:CDS |
| AAAGGTTGTTGTAAAGAAGC+CGG | 0.561512 | 7.1:+86366249 | MS.gene94406:CDS |
| GATACTGCTGTTGATGGTGG+TGG | 0.563460 | 7.1:+86364765 | MS.gene94406:CDS |
| TATTCAGTTGGATTTGATGG+TGG | 0.573005 | 7.1:+86364438 | MS.gene94406:intron |
| AACAAAGAGTCGGTGATGCA+TGG | 0.575868 | 7.1:+86366088 | MS.gene94406:CDS |
| TGGTAATGTTGAGTGTGGTG+AGG | 0.577945 | 7.1:+86364542 | MS.gene94406:CDS |
| TCAACTTTCATCGTCCCTGA+AGG | 0.578610 | 7.1:-86366199 | None:intergenic |
| GATAAACCAGAACCATCAAA+GGG | 0.583954 | 7.1:+86366412 | MS.gene94406:CDS |
| CGAAGAATACATTCTCGCGT+TGG | 0.584770 | 7.1:-86365351 | None:intergenic |
| GAGTGAAGATAGGGAATTTG+GGG | 0.586049 | 7.1:+86364707 | MS.gene94406:CDS |
| AACAAGCTTGAGAGCCTCCA+GGG | 0.587449 | 7.1:+86366451 | MS.gene94406:CDS |
| GTTAGAACAAGAAGAGCCAG+TGG | 0.587680 | 7.1:+86366172 | MS.gene94406:CDS |
| GGGTAGCTCGGACGAAGATG+TGG | 0.598451 | 7.1:+86366471 | MS.gene94406:CDS |
| AGAAAATATGAATTTCCAAG+AGG | 0.598753 | 7.1:+86365493 | MS.gene94406:CDS |
| TCTAGCAAAAGCTCTATCAA+GGG | 0.599294 | 7.1:+86366141 | MS.gene94406:CDS |
| TGATTCAGGATTGGATTCTG+AGG | 0.599780 | 7.1:+86366510 | MS.gene94406:CDS |
| GAAGGAGAAGTGGATGGTGT+TGG | 0.600256 | 7.1:+86364615 | MS.gene94406:CDS |
| TTCAGGATTGGATTCTGAGG+TGG | 0.603058 | 7.1:+86366513 | MS.gene94406:CDS |
| CAGCAGGCGAGGATCCACCT+GGG | 0.605364 | 7.1:+86366065 | MS.gene94406:CDS |
| TTCGAGACAACAGTGTGAGA+CGG | 0.605971 | 7.1:+86365087 | MS.gene94406:CDS |
| ATGACTTCAAGAGTAAAAGT+GGG | 0.606366 | 7.1:+86366041 | MS.gene94406:intron |
| TTTGGTTGGATCCGCAAATG+GGG | 0.609216 | 7.1:-86363976 | None:intergenic |
| AAGAGGAAGGGATGGAACAA+AGG | 0.613436 | 7.1:+86365156 | MS.gene94406:CDS |
| ACGTCGTTCTCTTCTCATGC+CGG | 0.614761 | 7.1:+86364945 | MS.gene94406:CDS |
| TACTTTGGTAATGTTGAGTG+TGG | 0.616591 | 7.1:+86364537 | MS.gene94406:CDS |
| ACCGACTCTTTGTTCCCAGG+TGG | 0.618912 | 7.1:-86366079 | None:intergenic |
| GAATTCCAGTCAATAGGCGA+AGG | 0.619279 | 7.1:-86364798 | None:intergenic |
| AGACTTCCAAGAGGAAGTTG+TGG | 0.620957 | 7.1:+86365400 | MS.gene94406:CDS |
| AATGATACTGCTGTTGATGG+TGG | 0.626762 | 7.1:+86364762 | MS.gene94406:CDS |
| AAACGAAGAAGAATACATAC+CGG | 0.629762 | 7.1:-86364964 | None:intergenic |
| TTCGGGGAAGAAGGTATCCG+AGG | 0.630086 | 7.1:+86365193 | MS.gene94406:CDS |
| CTAGCAAAAGCTCTATCAAG+GGG | 0.633511 | 7.1:+86366142 | MS.gene94406:CDS |
| TCGGGGAAGAAGGTATCCGA+GGG | 0.635783 | 7.1:+86365194 | MS.gene94406:CDS |
| TTGGTTGAAGGAGAAGTGGA+TGG | 0.642962 | 7.1:+86364609 | MS.gene94406:CDS |
| AGAAAATGTCGGTTTCCAAG+TGG | 0.656525 | 7.1:+86365556 | MS.gene94406:CDS |
| TGAAGATATGAATTTCCATG+AGG | 0.658083 | 7.1:+86365619 | MS.gene94406:CDS |
| TCCACCTGGGAACAAAGAGT+CGG | 0.658869 | 7.1:+86366078 | MS.gene94406:CDS |
| GGAAAATATGAATTTCCAGG+AGG | 0.667610 | 7.1:+86365454 | MS.gene94406:CDS |
| GAGACAACAGTGTGAGACGG+AGG | 0.678381 | 7.1:+86365090 | MS.gene94406:CDS |
| CTTCGAACCGGTAATCCGAG+AGG | 0.707153 | 7.1:-86364579 | None:intergenic |
| CTTCGTCCGAGCTACCCTGG+AGG | 0.707835 | 7.1:-86366465 | None:intergenic |
| TGACTTCAAGAGTAAAAGTG+GGG | 0.720933 | 7.1:+86366042 | MS.gene94406:intron |
| AGACACTATAGACTTCCAAG+AGG | 0.725110 | 7.1:+86365391 | MS.gene94406:CDS |
| GGATTCAAAGAAGAGATTCG+GGG | 0.744273 | 7.1:+86365177 | MS.gene94406:CDS |
| TAGCAAAAGCTCTATCAAGG+GGG | 0.752717 | 7.1:+86366143 | MS.gene94406:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAATTGTTTCTCTAAAT+TGG | - | chr7.1:86364745-86364764 | None:intergenic | 15.0% |
| !! | AAATTCATATCTTCAGAAAA+AGG | - | chr7.1:86365614-86365633 | None:intergenic | 20.0% |
| !! | GGTAAATATTTCAATGAAAA+TGG | + | chr7.1:86364636-86364655 | MS.gene94406:CDS | 20.0% |
| ! | AAAGTTTATGGCAATGATAA+TGG | + | chr7.1:86364846-86364865 | MS.gene94406:CDS | 25.0% |
| ! | AGAAAATATGAATTTCCAAG+AGG | + | chr7.1:86365493-86365512 | MS.gene94406:CDS | 25.0% |
| ! | ATTGTTGTATCAACATTATC+CGG | - | chr7.1:86366271-86366290 | None:intergenic | 25.0% |
| ! | TCAAAAGGTCAAAAAATCTT+TGG | + | chr7.1:86366610-86366629 | MS.gene94406:CDS | 25.0% |
| !! | AGAAAATATGATTTTCGAAG+AGG | + | chr7.1:86365139-86365158 | MS.gene94406:CDS | 25.0% |
| !! | ATCAGAATTCGACAATTTTT+CGG | - | chr7.1:86364406-86364425 | None:intergenic | 25.0% |
| !! | TCGAATTCTGATGATAATTT+TGG | + | chr7.1:86364414-86364433 | MS.gene94406:intron | 25.0% |
| !! | TCTTTAAGAAACAGAAGAAT+GGG | + | chr7.1:86365221-86365240 | MS.gene94406:CDS | 25.0% |
| !! | TTCTTCTGTTTCTTAAAGAA+CGG | - | chr7.1:86365220-86365239 | None:intergenic | 25.0% |
| !! | TTCTTTAAGAAACAGAAGAA+TGG | + | chr7.1:86365220-86365239 | MS.gene94406:CDS | 25.0% |
| !!! | GATAATTTTGGTTATTCAGT+TGG | + | chr7.1:86364426-86364445 | MS.gene94406:intron | 25.0% |
| !!! | TTACCTTTTTTGATTGGTTT+TGG | - | chr7.1:86363997-86364016 | None:intergenic | 25.0% |
| AAAATTTCTCAGGTATCTTC+AGG | + | chr7.1:86365656-86365675 | MS.gene94406:intron | 30.0% | |
| AAACGAAGAAGAATACATAC+CGG | - | chr7.1:86364967-86364986 | None:intergenic | 30.0% | |
| AACCAGATCTTCTATTCAAA+GGG | + | chr7.1:86366317-86366336 | MS.gene94406:CDS | 30.0% | |
| AAGGATTCAAAGAAGAGATT+CGG | + | chr7.1:86365175-86365194 | MS.gene94406:CDS | 30.0% | |
| AGAATAAGATGATGCATTGT+TGG | + | chr7.1:86364316-86364335 | MS.gene94406:intron | 30.0% | |
| ATATGTCAATGATTCAGGAT+TGG | + | chr7.1:86366501-86366520 | MS.gene94406:CDS | 30.0% | |
| ATGACTTCAAGAGTAAAAGT+GGG | + | chr7.1:86366041-86366060 | MS.gene94406:intron | 30.0% | |
| CAACCAAAACCAATCAAAAA+AGG | + | chr7.1:86363991-86364010 | MS.gene94406:CDS | 30.0% | |
| GAACTAATGTGATTCAATCT+TGG | + | chr7.1:86364469-86364488 | MS.gene94406:CDS | 30.0% | |
| GGATCAATTGAAAGATCAAA+AGG | + | chr7.1:86366595-86366614 | MS.gene94406:CDS | 30.0% | |
| GTGAAATTGAGAATTCATGT+GGG | + | chr7.1:86364286-86364305 | MS.gene94406:intron | 30.0% | |
| TCTGAATATGTCAATGATTC+AGG | + | chr7.1:86366496-86366515 | MS.gene94406:CDS | 30.0% | |
| TGAAGATATGAATTTCCATG+AGG | + | chr7.1:86365619-86365638 | MS.gene94406:CDS | 30.0% | |
| TGCATCGGATAATATCAATA+CGG | + | chr7.1:86364995-86365014 | MS.gene94406:CDS | 30.0% | |
| TGTGAAATTGAGAATTCATG+TGG | + | chr7.1:86364285-86364304 | MS.gene94406:intron | 30.0% | |
| TTCGGAAAATATGAATTTCC+AGG | + | chr7.1:86365451-86365470 | MS.gene94406:CDS | 30.0% | |
| TTCTGATGAAACAGAATCTA+TGG | - | chr7.1:86365846-86365865 | None:intergenic | 30.0% | |
| TTTAATGATACTGCTGTTGA+TGG | + | chr7.1:86364759-86364778 | MS.gene94406:CDS | 30.0% | |
| ! | AAAATCATATTTTCTCGAGC+AGG | - | chr7.1:86365134-86365153 | None:intergenic | 30.0% |
| ! | AAATTCTTCTTTTCCAAAGC+AGG | - | chr7.1:86365068-86365087 | None:intergenic | 30.0% |
| ! | AATATGATTTTCGAAGAGGA+AGG | + | chr7.1:86365143-86365162 | MS.gene94406:CDS | 30.0% |
| ! | AATTGTTTCTCTAAATTGGC+AGG | - | chr7.1:86364741-86364760 | None:intergenic | 30.0% |
| ! | ATATGATTTTCGAAGAGGAA+GGG | + | chr7.1:86365144-86365163 | MS.gene94406:CDS | 30.0% |
| ! | ATATTTTCCGAAGTATGCAA+AGG | - | chr7.1:86365443-86365462 | None:intergenic | 30.0% |
| ! | ATTTTCTGTAGCATGCAAAT+AGG | - | chr7.1:86365543-86365562 | None:intergenic | 30.0% |
| ! | CTATTTTCCAAATCATGATG+AGG | + | chr7.1:86366363-86366382 | MS.gene94406:CDS | 30.0% |
| ! | TATTTTCCGAAGTATGCAAA+GGG | - | chr7.1:86365442-86365461 | None:intergenic | 30.0% |
| ! | TTTCCTGCTTCAACTATTTT+TGG | + | chr7.1:86364255-86364274 | MS.gene94406:intron | 30.0% |
| !!! | CAAGAGTTACCTTTTTTGAT+TGG | - | chr7.1:86364003-86364022 | None:intergenic | 30.0% |
| !!! | CTTTTTTGATTGGTTTTGGT+TGG | - | chr7.1:86363993-86364012 | None:intergenic | 30.0% |
| AAAAATTCAGGAGCTTGTGA+AGG | - | chr7.1:86364087-86364106 | None:intergenic | 35.0% | |
| AAAGGTTGTTGTAAAGAAGC+CGG | + | chr7.1:86366249-86366268 | MS.gene94406:CDS | 35.0% | |
| AAATCATGATGAGGTTTCGT+TGG | + | chr7.1:86366372-86366391 | MS.gene94406:CDS | 35.0% | |
| AAATGGCTGCAATGAAGTTT+CGG | - | chr7.1:86365981-86366000 | None:intergenic | 35.0% | |
| AACAGAAGAATGGGTACTAA+AGG | + | chr7.1:86365230-86365249 | MS.gene94406:CDS | 35.0% | |
| AACCTTGAATTCCAGTCAAT+AGG | - | chr7.1:86364807-86364826 | None:intergenic | 35.0% | |
| AACGAAACCTCATCATGATT+TGG | - | chr7.1:86366373-86366392 | None:intergenic | 35.0% | |
| AACTTGAACCACGTATTTCA+CGG | + | chr7.1:86365762-86365781 | MS.gene94406:intron | 35.0% | |
| AATGAAACGATGGAACTTAG+AGG | + | chr7.1:86365680-86365699 | MS.gene94406:intron | 35.0% | |
| ACAGAAGAATGGGTACTAAA+GGG | + | chr7.1:86365231-86365250 | MS.gene94406:CDS | 35.0% | |
| ACCAATTTCAAACTTCGAAC+CGG | - | chr7.1:86364594-86364613 | None:intergenic | 35.0% | |
| AGAAATGAGACAACAGAATG+AGG | + | chr7.1:86365031-86365050 | MS.gene94406:CDS | 35.0% | |
| AGATAAACCAGAACCATCAA+AGG | + | chr7.1:86366411-86366430 | MS.gene94406:CDS | 35.0% | |
| AGATATGAATTTCCATGAGG+TGG | + | chr7.1:86365622-86365641 | MS.gene94406:CDS | 35.0% | |
| AGGATTCAAAGAAGAGATTC+GGG | + | chr7.1:86365176-86365195 | MS.gene94406:CDS | 35.0% | |
| ATAATGGTTCTTCGCAGTTT+AGG | + | chr7.1:86364862-86364881 | MS.gene94406:CDS | 35.0% | |
| ATCCCTTTGAATAGAAGATC+TGG | - | chr7.1:86366322-86366341 | None:intergenic | 35.0% | |
| ATCTTCAGGAAATGAAACGA+TGG | + | chr7.1:86365670-86365689 | MS.gene94406:intron | 35.0% | |
| ATGATGCATTGTTGGAATGA+TGG | + | chr7.1:86364324-86364343 | MS.gene94406:intron | 35.0% | |
| ATTGACTGGAATTCAAGGTT+TGG | + | chr7.1:86364807-86364826 | MS.gene94406:CDS | 35.0% | |
| CAACAATGCCAATGAAAAGA+AGG | - | chr7.1:86364149-86364168 | None:intergenic | 35.0% | |
| CACTCAACATTACCAAAGTA+AGG | - | chr7.1:86364537-86364556 | None:intergenic | 35.0% | |
| CAGATTAGGCTTCAGAAAAT+TGG | + | chr7.1:86366574-86366593 | MS.gene94406:CDS | 35.0% | |
| GAACCAGATCTTCTATTCAA+AGG | + | chr7.1:86366316-86366335 | MS.gene94406:CDS | 35.0% | |
| GAATTTCCAAGAGGAAGATA+TGG | + | chr7.1:86365502-86365521 | MS.gene94406:CDS | 35.0% | |
| GATAAACCAGAACCATCAAA+GGG | + | chr7.1:86366412-86366431 | MS.gene94406:CDS | 35.0% | |
| GATGACTTCAAGAGTAAAAG+TGG | + | chr7.1:86366040-86366059 | MS.gene94406:intron | 35.0% | |
| GCATCGGATAATATCAATAC+GGG | + | chr7.1:86364996-86365015 | MS.gene94406:CDS | 35.0% | |
| GGAAAATATGAATTTCCAGG+AGG | + | chr7.1:86365454-86365473 | MS.gene94406:CDS | 35.0% | |
| GGTTATTCAGTTGGATTTGA+TGG | + | chr7.1:86364435-86364454 | MS.gene94406:intron | 35.0% | |
| TATTCAGTTGGATTTGATGG+TGG | + | chr7.1:86364438-86364457 | MS.gene94406:intron | 35.0% | |
| TCACCAAAAATAGTTGAAGC+AGG | - | chr7.1:86364261-86364280 | None:intergenic | 35.0% | |
| TCTAGCAAAAGCTCTATCAA+GGG | + | chr7.1:86366141-86366160 | MS.gene94406:CDS | 35.0% | |
| TGACTTCAAGAGTAAAAGTG+GGG | + | chr7.1:86366042-86366061 | MS.gene94406:intron | 35.0% | |
| TGAGCTTCATCAACAGATAT+TGG | - | chr7.1:86365743-86365762 | None:intergenic | 35.0% | |
| TGAGTGAAGATAGGGAATTT+GGG | + | chr7.1:86364706-86364725 | MS.gene94406:CDS | 35.0% | |
| TGAGTTTCATCAACAGACAT+TGG | - | chr7.1:86365278-86365297 | None:intergenic | 35.0% | |
| TGATGCATTGTTGGAATGAT+GGG | + | chr7.1:86364325-86364344 | MS.gene94406:intron | 35.0% | |
| TTGCATGCTACAGAAAATGT+CGG | + | chr7.1:86365545-86365564 | MS.gene94406:CDS | 35.0% | |
| TTTCTCATCCTTCTCATTTC+AGG | + | chr7.1:86365717-86365736 | MS.gene94406:intron | 35.0% | |
| ! | AATGGAAGTGATTCGAGTTT+AGG | + | chr7.1:86364654-86364673 | MS.gene94406:CDS | 35.0% |
| ! | ATTGGCATTGTTGTTGCTTA+TGG | + | chr7.1:86364156-86364175 | MS.gene94406:intron | 35.0% |
| ! | ATTTTCCGAAGTATGCAAAG+GGG | - | chr7.1:86365441-86365460 | None:intergenic | 35.0% |
| ! | CGAAGTTTGAAATTGGTTGA+AGG | + | chr7.1:86364597-86364616 | MS.gene94406:CDS | 35.0% |
| ! | CTTCTTCACCTTCTTTTCAT+TGG | + | chr7.1:86364138-86364157 | MS.gene94406:intron | 35.0% |
| ! | GTTGATGAGACTAAGTTTGA+AGG | + | chr7.1:86364894-86364913 | MS.gene94406:CDS | 35.0% |
| ! | TCTTTGGTGACAACAATGTT+AGG | + | chr7.1:86366626-86366645 | MS.gene94406:CDS | 35.0% |
| ! | TTCAAGTTCACCATCATCTT+CGG | + | chr7.1:86365943-86365962 | MS.gene94406:intron | 35.0% |
| ! | TTCGTTTGATTCGATTGCAT+CGG | + | chr7.1:86364980-86364999 | MS.gene94406:CDS | 35.0% |
| !! | ATGGGTTGGTTCAAAAATTC+AGG | - | chr7.1:86364099-86364118 | None:intergenic | 35.0% |
| !! | TACTTTGGTAATGTTGAGTG+TGG | + | chr7.1:86364537-86364556 | MS.gene94406:CDS | 35.0% |
| AACCCATACTCACCAAGTTA+TGG | + | chr7.1:86364112-86364131 | MS.gene94406:intron | 40.0% | |
| AAGCTAGTGAATTTATCGCC+AGG | + | chr7.1:86366542-86366561 | MS.gene94406:CDS | 40.0% | |
| AAGTATGCATATCTTCCTCC+TGG | - | chr7.1:86365472-86365491 | None:intergenic | 40.0% | |
| ACCCATACTCACCAAGTTAT+GGG | + | chr7.1:86364113-86364132 | MS.gene94406:intron | 40.0% | |
| ACTGGAATTCAAGGTTTGGA+AGG | + | chr7.1:86364811-86364830 | MS.gene94406:CDS | 40.0% | |
| AGAAAATATGAATCCGCTGC+AGG | + | chr7.1:86365862-86365881 | MS.gene94406:intron | 40.0% | |
| AGACACTATAGACTTCCAAG+AGG | + | chr7.1:86365391-86365410 | MS.gene94406:CDS | 40.0% | |
| AGATAGGGAATTTGGGGATA+TGG | + | chr7.1:86364713-86364732 | MS.gene94406:CDS | 40.0% | |
| ATGGAGAGGGAGAAAGTTTA+TGG | + | chr7.1:86364834-86364853 | MS.gene94406:CDS | 40.0% | |
| CAATCACAAAACCCCATTTG+CGG | + | chr7.1:86363965-86363984 | MS.gene94406:CDS | 40.0% | |
| CTAGCAAAAGCTCTATCAAG+GGG | + | chr7.1:86366142-86366161 | MS.gene94406:CDS | 40.0% | |
| GAAATTGGTTGAAGGAGAAG+TGG | + | chr7.1:86364605-86364624 | MS.gene94406:CDS | 40.0% | |
| GAATTCAAGGTTTGGAAGGA+TGG | + | chr7.1:86364815-86364834 | MS.gene94406:CDS | 40.0% | |
| GAGACTAAGTTTGAAGGACT+TGG | + | chr7.1:86364900-86364919 | MS.gene94406:CDS | 40.0% | |
| GAGTGAAGATAGGGAATTTG+GGG | + | chr7.1:86364707-86364726 | MS.gene94406:CDS | 40.0% | |
| GGAAACATGCTGCACATTTA+AGG | + | chr7.1:86365252-86365271 | MS.gene94406:CDS | 40.0% | |
| GGATTCAAAGAAGAGATTCG+GGG | + | chr7.1:86365177-86365196 | MS.gene94406:CDS | 40.0% | |
| GGTGGTAATAGTAGTACTGT+TGG | + | chr7.1:86364357-86364376 | MS.gene94406:intron | 40.0% | |
| GGTTTCCAAGTGGAAGATTT+GGG | + | chr7.1:86365566-86365585 | MS.gene94406:CDS | 40.0% | |
| GTCTAGCAAAAGCTCTATCA+AGG | + | chr7.1:86366140-86366159 | MS.gene94406:CDS | 40.0% | |
| GTGAGTGAAGATAGGGAATT+TGG | + | chr7.1:86364705-86364724 | MS.gene94406:CDS | 40.0% | |
| GTTGGATGTGAGTGAAGATA+GGG | + | chr7.1:86364698-86364717 | MS.gene94406:CDS | 40.0% | |
| GTTGTTGCTCAACCTTACTT+TGG | + | chr7.1:86364522-86364541 | MS.gene94406:CDS | 40.0% | |
| GTTGTTGGTCATAAACCTCT+CGG | + | chr7.1:86364564-86364583 | MS.gene94406:CDS | 40.0% | |
| TAGCAAAAGCTCTATCAAGG+GGG | + | chr7.1:86366143-86366162 | MS.gene94406:CDS | 40.0% | |
| TAGCAAGCAAGCTGATGAAA+AGG | + | chr7.1:86366231-86366250 | MS.gene94406:CDS | 40.0% | |
| TCATAAACCTCTCGGATTAC+CGG | + | chr7.1:86364572-86364591 | MS.gene94406:CDS | 40.0% | |
| TCGTGTAGCAAGCTAACAAA+TGG | - | chr7.1:86365998-86366017 | None:intergenic | 40.0% | |
| TGAAGAAGACGAAGAAGAAG+AGG | - | chr7.1:86365927-86365946 | None:intergenic | 40.0% | |
| TGATTCAGGATTGGATTCTG+AGG | + | chr7.1:86366510-86366529 | MS.gene94406:CDS | 40.0% | |
| TTAGTCTCATCAACCGAAAG+AGG | - | chr7.1:86364888-86364907 | None:intergenic | 40.0% | |
| TTTGGCGACGAAAATTTCTC+AGG | + | chr7.1:86365646-86365665 | MS.gene94406:CDS | 40.0% | |
| TTTGTCCCAAATCTTCCACT+TGG | - | chr7.1:86365574-86365593 | None:intergenic | 40.0% | |
| TTTGTTCCACAACTTCCTCT+TGG | - | chr7.1:86365409-86365428 | None:intergenic | 40.0% | |
| ! | AATGATACTGCTGTTGATGG+TGG | + | chr7.1:86364762-86364781 | MS.gene94406:CDS | 40.0% |
| ! | AGAGCTTTTGCTAGACTTGT+TGG | - | chr7.1:86366136-86366155 | None:intergenic | 40.0% |
| ! | ATAACTTGGTGAGTATGGGT+TGG | - | chr7.1:86364113-86364132 | None:intergenic | 40.0% |
| ! | GAATTTCCATGAGGTGGATT+TGG | + | chr7.1:86365628-86365647 | MS.gene94406:CDS | 40.0% |
| ! | GATATTGGCCTGAAATGAGA+AGG | - | chr7.1:86365728-86365747 | None:intergenic | 40.0% |
| ! | TCCCATAACTTGGTGAGTAT+GGG | - | chr7.1:86364117-86364136 | None:intergenic | 40.0% |
| !! | ACCGGTTCGAAGTTTGAAAT+TGG | + | chr7.1:86364590-86364609 | MS.gene94406:CDS | 40.0% |
| !! | AGAAAATGTCGGTTTCCAAG+TGG | + | chr7.1:86365556-86365575 | MS.gene94406:CDS | 40.0% |
| !! | GCAAATGGGGTTTTGTGATT+GGG | - | chr7.1:86363966-86363985 | None:intergenic | 40.0% |
| !! | GGATTTGATGGTGGAAATGA+TGG | + | chr7.1:86364447-86364466 | MS.gene94406:CDS | 40.0% |
| !! | TGGAATGATGGGTCTAATGA+GGG | + | chr7.1:86364336-86364355 | MS.gene94406:intron | 40.0% |
| !! | TTGGAATGATGGGTCTAATG+AGG | + | chr7.1:86364335-86364354 | MS.gene94406:intron | 40.0% |
| !! | TTTTGGTTGGATCCGCAAAT+GGG | - | chr7.1:86363980-86363999 | None:intergenic | 40.0% |
| AACAAAGAGTCGGTGATGCA+TGG | + | chr7.1:86366088-86366107 | MS.gene94406:CDS | 45.0% | |
| AAGAAGAGATTCGGGGAAGA+AGG | + | chr7.1:86365184-86365203 | MS.gene94406:CDS | 45.0% | |
| AAGAGGAAGGGATGGAACAA+AGG | + | chr7.1:86365156-86365175 | MS.gene94406:CDS | 45.0% | |
| AAGGTTTGGAAGGATGGAGA+GGG | + | chr7.1:86364821-86364840 | MS.gene94406:CDS | 45.0% | |
| AAGTCTTCCACACCCTTTGA+TGG | - | chr7.1:86366427-86366446 | None:intergenic | 45.0% | |
| AATATGAATCCGCTGCAGGA+AGG | + | chr7.1:86365866-86365885 | MS.gene94406:intron | 45.0% | |
| AGAACGCAAACTCGTGTTAC+TGG | - | chr7.1:86365822-86365841 | None:intergenic | 45.0% | |
| AGACTTCCAAGAGGAAGTTG+TGG | + | chr7.1:86365400-86365419 | MS.gene94406:CDS | 45.0% | |
| CAGAAAAAGATCCTGTCGAC+TGG | - | chr7.1:86365331-86365350 | None:intergenic | 45.0% | |
| CCAGGTTCAAAGCTCAGATT+AGG | + | chr7.1:86366560-86366579 | MS.gene94406:CDS | 45.0% | |
| CGAAGAATACATTCTCGCGT+TGG | - | chr7.1:86365354-86365373 | None:intergenic | 45.0% | |
| CGCGAGAATGTATTCTTCGA+TGG | + | chr7.1:86365355-86365374 | MS.gene94406:CDS | 45.0% | |
| CGGTTTCCAAGTGGAAGATT+TGG | + | chr7.1:86365565-86365584 | MS.gene94406:CDS | 45.0% | |
| GAATTCCAGTCAATAGGCGA+AGG | - | chr7.1:86364801-86364820 | None:intergenic | 45.0% | |
| GACTTCCCCTTTGCATACTT+CGG | + | chr7.1:86365433-86365452 | MS.gene94406:CDS | 45.0% | |
| GGAGCTTGTGAAGGAAAAAG+TGG | - | chr7.1:86364078-86364097 | None:intergenic | 45.0% | |
| GGTTGGATGTGAGTGAAGAT+AGG | + | chr7.1:86364697-86364716 | MS.gene94406:CDS | 45.0% | |
| GTGAAGAAGCTCCCATAACT+TGG | - | chr7.1:86364127-86364146 | None:intergenic | 45.0% | |
| GTTAGAACAAGAAGAGCCAG+TGG | + | chr7.1:86366172-86366191 | MS.gene94406:CDS | 45.0% | |
| GTTTCTTAAAGAACGGCCCT+CGG | - | chr7.1:86365213-86365232 | None:intergenic | 45.0% | |
| TCAACTTTCATCGTCCCTGA+AGG | - | chr7.1:86366202-86366221 | None:intergenic | 45.0% | |
| TGCAAAGACCGTGAAATACG+TGG | - | chr7.1:86365773-86365792 | None:intergenic | 45.0% | |
| TGTGCTCCATATCTTCCTCT+TGG | - | chr7.1:86365511-86365530 | None:intergenic | 45.0% | |
| TTCCTTCTAGCCGAAGATGA+TGG | - | chr7.1:86365956-86365975 | None:intergenic | 45.0% | |
| TTCGAGACAACAGTGTGAGA+CGG | + | chr7.1:86365087-86365106 | MS.gene94406:CDS | 45.0% | |
| TTCGCAGTTTAGGCCTCTTT+CGG | + | chr7.1:86364872-86364891 | MS.gene94406:CDS | 45.0% | |
| TTGGTTGAAGGAGAAGTGGA+TGG | + | chr7.1:86364609-86364628 | MS.gene94406:CDS | 45.0% | |
| TTTGGTTGGATCCGCAAATG+GGG | - | chr7.1:86363979-86363998 | None:intergenic | 45.0% | |
| ! | ATCAAAGGGTGTGGAAGACT+TGG | + | chr7.1:86366426-86366445 | MS.gene94406:CDS | 45.0% |
| ! | CGCCTATTGACTGGAATTCA+AGG | + | chr7.1:86364802-86364821 | MS.gene94406:CDS | 45.0% |
| ! | CTCCCATAACTTGGTGAGTA+TGG | - | chr7.1:86364118-86364137 | None:intergenic | 45.0% |
| ! | CTTTTCCAAAGCAGGCACAT+AGG | - | chr7.1:86365060-86365079 | None:intergenic | 45.0% |
| ! | GATTTTCGAAGAGGAAGGGA+TGG | + | chr7.1:86365148-86365167 | MS.gene94406:CDS | 45.0% |
| ! | GGTGATGCATGGTTTGCATT+CGG | + | chr7.1:86366099-86366118 | MS.gene94406:CDS | 45.0% |
| ! | GTGATTCGAGTTTAGGTTCG+AGG | + | chr7.1:86364661-86364680 | MS.gene94406:CDS | 45.0% |
| ! | TGGTAATGTTGAGTGTGGTG+AGG | + | chr7.1:86364542-86364561 | MS.gene94406:CDS | 45.0% |
| ! | TTCAGGATTGGATTCTGAGG+TGG | + | chr7.1:86366513-86366532 | MS.gene94406:CDS | 45.0% |
| !! | AATGATGGGTCTAATGAGGG+TGG | + | chr7.1:86364339-86364358 | MS.gene94406:intron | 45.0% |
| !! | CCTAATCTGAGCTTTGAACC+TGG | - | chr7.1:86366563-86366582 | None:intergenic | 45.0% |
| !! | CGCAAATGGGGTTTTGTGAT+TGG | - | chr7.1:86363967-86363986 | None:intergenic | 45.0% |
| !! | TGGGGTTTTGTGATTGGGAT+TGG | - | chr7.1:86363961-86363980 | None:intergenic | 45.0% |
| !!! | GTTTTGGTTGGATCCGCAAA+TGG | - | chr7.1:86363981-86364000 | None:intergenic | 45.0% |
| AACAAGCTTGAGAGCCTCCA+GGG | + | chr7.1:86366451-86366470 | MS.gene94406:CDS | 50.0% | |
| AAGAGTAAAAGTGGGGCAGC+AGG | + | chr7.1:86366049-86366068 | MS.gene94406:intron | 50.0% | |
| AATCCGCTGCAGGAAGGTTT+AGG | + | chr7.1:86365872-86365891 | MS.gene94406:intron | 50.0% | |
| ACCAGAACCATCAAAGGGTG+TGG | + | chr7.1:86366417-86366436 | MS.gene94406:CDS | 50.0% | |
| ACGTCGTTCTCTTCTCATGC+CGG | + | chr7.1:86364945-86364964 | MS.gene94406:CDS | 50.0% | |
| ATCCGCTGCAGGAAGGTTTA+GGG | + | chr7.1:86365873-86365892 | MS.gene94406:intron | 50.0% | |
| CAAGGTTTGGAAGGATGGAG+AGG | + | chr7.1:86364820-86364839 | MS.gene94406:CDS | 50.0% | |
| CACCATCATCTTCGGCTAGA+AGG | + | chr7.1:86365951-86365970 | MS.gene94406:intron | 50.0% | |
| GAAGGAGAAGTGGATGGTGT+TGG | + | chr7.1:86364615-86364634 | MS.gene94406:CDS | 50.0% | |
| GGATTCCTATGTGCCTGCTT+TGG | + | chr7.1:86365052-86365071 | MS.gene94406:CDS | 50.0% | |
| GGGGAAAAGAAGAGCTTGCA+TGG | + | chr7.1:86365893-86365912 | MS.gene94406:intron | 50.0% | |
| GTTGAGTGTGGTGAGGTTGT+TGG | + | chr7.1:86364549-86364568 | MS.gene94406:CDS | 50.0% | |
| GTTTGCATTCGGACTCAGAC+AGG | + | chr7.1:86366110-86366129 | MS.gene94406:CDS | 50.0% | |
| TAACAAGCTTGAGAGCCTCC+AGG | + | chr7.1:86366450-86366469 | MS.gene94406:CDS | 50.0% | |
| TCACAGTCTTTCCAGTCGAC+AGG | + | chr7.1:86365317-86365336 | MS.gene94406:CDS | 50.0% | |
| TCACGGTCTTTGCAGTCTGT+GGG | + | chr7.1:86365779-86365798 | MS.gene94406:intron | 50.0% | |
| TCCACCTGGGAACAAAGAGT+CGG | + | chr7.1:86366078-86366097 | MS.gene94406:CDS | 50.0% | |
| TTCACGGTCTTTGCAGTCTG+TGG | + | chr7.1:86365778-86365797 | MS.gene94406:intron | 50.0% | |
| ! | GAGGCGTTCTTCTAAGAGGT+TGG | + | chr7.1:86364680-86364699 | MS.gene94406:CDS | 50.0% |
| ! | GTTCGAGGCGTTCTTCTAAG+AGG | + | chr7.1:86364676-86364695 | MS.gene94406:CDS | 50.0% |
| ! | TCCACACCCTTTGATGGTTC+TGG | - | chr7.1:86366421-86366440 | None:intergenic | 50.0% |
| !! | ATCACCGACTCTTTGTTCCC+AGG | - | chr7.1:86366085-86366104 | None:intergenic | 50.0% |
| !! | GATACTGCTGTTGATGGTGG+TGG | + | chr7.1:86364765-86364784 | MS.gene94406:CDS | 50.0% |
| CTTCGAACCGGTAATCCGAG+AGG | - | chr7.1:86364582-86364601 | None:intergenic | 55.0% | |
| CTTCGCCTTCGCCTATTGAC+TGG | + | chr7.1:86364793-86364812 | MS.gene94406:CDS | 55.0% | |
| GAGACAACAGTGTGAGACGG+AGG | + | chr7.1:86365090-86365109 | MS.gene94406:CDS | 55.0% | |
| TCCCCTAAACCTTCCTGCAG+CGG | - | chr7.1:86365878-86365897 | None:intergenic | 55.0% | |
| TCCGCTGCAGGAAGGTTTAG+GGG | + | chr7.1:86365874-86365893 | MS.gene94406:intron | 55.0% | |
| TCGTCGCCAAATCCACCTCA+TGG | - | chr7.1:86365637-86365656 | None:intergenic | 55.0% | |
| ! | ACCGACTCTTTGTTCCCAGG+TGG | - | chr7.1:86366082-86366101 | None:intergenic | 55.0% |
| !! | AGAGCCAGTGGATTGCCTTC+AGG | + | chr7.1:86366184-86366203 | MS.gene94406:CDS | 55.0% |
| !! | GAGCCAGTGGATTGCCTTCA+GGG | + | chr7.1:86366185-86366204 | MS.gene94406:CDS | 55.0% |
| !! | TCGGGGAAGAAGGTATCCGA+GGG | + | chr7.1:86365194-86365213 | MS.gene94406:CDS | 55.0% |
| !! | TTCGGGGAAGAAGGTATCCG+AGG | + | chr7.1:86365193-86365212 | MS.gene94406:CDS | 55.0% |
| CATCTTCGTCCGAGCTACCC+TGG | - | chr7.1:86366471-86366490 | None:intergenic | 60.0% | |
| CGTCCCTGAAGGCAATCCAC+TGG | - | chr7.1:86366191-86366210 | None:intergenic | 60.0% | |
| GGGTAGCTCGGACGAAGATG+TGG | + | chr7.1:86366471-86366490 | MS.gene94406:CDS | 60.0% | |
| TAAAAGTGGGGCAGCAGGCG+AGG | + | chr7.1:86366054-86366073 | MS.gene94406:CDS | 60.0% | |
| TGAGAGCCTCCAGGGTAGCT+CGG | + | chr7.1:86366459-86366478 | MS.gene94406:CDS | 60.0% | |
| CAGCAGGCGAGGATCCACCT+GGG | + | chr7.1:86366065-86366084 | MS.gene94406:CDS | 65.0% | |
| CTTCGTCCGAGCTACCCTGG+AGG | - | chr7.1:86366468-86366487 | None:intergenic | 65.0% | |
| GCAGCAGGCGAGGATCCACC+TGG | + | chr7.1:86366064-86366083 | MS.gene94406:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 86363949 | 86366651 | 86363949 | ID=MS.gene94406 |
| chr7.1 | mRNA | 86363949 | 86366651 | 86363949 | ID=MS.gene94406.t1;Parent=MS.gene94406 |
| chr7.1 | exon | 86363949 | 86364012 | 86363949 | ID=MS.gene94406.t1.exon1;Parent=MS.gene94406.t1 |
| chr7.1 | CDS | 86363949 | 86364012 | 86363949 | ID=cds.MS.gene94406.t1;Parent=MS.gene94406.t1 |
| chr7.1 | exon | 86364445 | 86365667 | 86364445 | ID=MS.gene94406.t1.exon2;Parent=MS.gene94406.t1 |
| chr7.1 | CDS | 86364445 | 86365667 | 86364445 | ID=cds.MS.gene94406.t1;Parent=MS.gene94406.t1 |
| chr7.1 | exon | 86366052 | 86366651 | 86366052 | ID=MS.gene94406.t1.exon3;Parent=MS.gene94406.t1 |
| chr7.1 | CDS | 86366052 | 86366651 | 86366052 | ID=cds.MS.gene94406.t1;Parent=MS.gene94406.t1 |
| Gene Sequence |
| Protein sequence |
