Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94549.t1 | XP_003631094.1 | 81.7 | 682 | 101 | 6 | 1 | 673 | 1 | 667 | 2.20E-241 | 845.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94549.t1 | B0F9L7 | 44.7 | 694 | 336 | 11 | 1 | 673 | 1 | 667 | 1.6e-102 | 375.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94549.t1 | G7LDC1 | 81.7 | 682 | 101 | 6 | 1 | 673 | 1 | 667 | 1.6e-241 | 845.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene94549 | 0.8161 | 6.58E-52 | -1.69E-46 |
| MS.gene050084 | MS.gene94549 | 0.826044 | 3.37E-54 | -1.69E-46 |
| MS.gene050085 | MS.gene94549 | 0.838447 | 2.86E-57 | -1.69E-46 |
| MS.gene050361 | MS.gene94549 | 0.808791 | 2.60E-50 | -1.69E-46 |
| MS.gene050386 | MS.gene94549 | 0.80179 | 7.62E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene94549 | 0.820704 | 5.96E-53 | -1.69E-46 |
| MS.gene050941 | MS.gene94549 | 0.83902 | 2.03E-57 | -1.69E-46 |
| MS.gene051184 | MS.gene94549 | 0.810064 | 1.39E-50 | -1.69E-46 |
| MS.gene051452 | MS.gene94549 | 0.837312 | 5.60E-57 | -1.69E-46 |
| MS.gene052434 | MS.gene94549 | 0.836549 | 8.77E-57 | -1.69E-46 |
| MS.gene053008 | MS.gene94549 | 0.815917 | 7.23E-52 | -1.69E-46 |
| MS.gene053058 | MS.gene94549 | 0.804329 | 2.28E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene94549 | 0.802112 | 6.55E-49 | -1.69E-46 |
| MS.gene053381 | MS.gene94549 | 0.800536 | 1.38E-48 | -1.69E-46 |
| MS.gene054823 | MS.gene94549 | 0.809168 | 2.16E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene94549 | 0.818275 | 2.13E-52 | -1.69E-46 |
| MS.gene055313 | MS.gene94549 | 0.805282 | 1.44E-49 | -1.69E-46 |
| MS.gene055314 | MS.gene94549 | 0.81259 | 3.93E-51 | -1.69E-46 |
| MS.gene055926 | MS.gene94549 | 0.800537 | 1.38E-48 | -1.69E-46 |
| MS.gene056045 | MS.gene94549 | 0.813275 | 2.78E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene94549 | 0.82838 | 9.28E-55 | -1.69E-46 |
| MS.gene056787 | MS.gene94549 | 0.816312 | 5.90E-52 | -1.69E-46 |
| MS.gene056849 | MS.gene94549 | 0.82423 | 9.03E-54 | -1.69E-46 |
| MS.gene058054 | MS.gene94549 | 0.819378 | 1.20E-52 | -1.69E-46 |
| MS.gene058055 | MS.gene94549 | 0.805105 | 1.57E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene94549 | 0.830509 | 2.82E-55 | -1.69E-46 |
| MS.gene058278 | MS.gene94549 | 0.820446 | 6.83E-53 | -1.69E-46 |
| MS.gene058292 | MS.gene94549 | 0.817788 | 2.75E-52 | -1.69E-46 |
| MS.gene058595 | MS.gene94549 | 0.822302 | 2.55E-53 | -1.69E-46 |
| MS.gene058646 | MS.gene94549 | 0.808115 | 3.63E-50 | -1.69E-46 |
| MS.gene058758 | MS.gene94549 | 0.801496 | 8.76E-49 | -1.69E-46 |
| MS.gene059283 | MS.gene94549 | 0.809524 | 1.81E-50 | -1.69E-46 |
| MS.gene059360 | MS.gene94549 | 0.801211 | 1.00E-48 | -1.69E-46 |
| MS.gene06010 | MS.gene94549 | 0.831882 | 1.30E-55 | -1.69E-46 |
| MS.gene060191 | MS.gene94549 | 0.806098 | 9.70E-50 | -1.69E-46 |
| MS.gene060296 | MS.gene94549 | 0.820609 | 6.27E-53 | -1.69E-46 |
| MS.gene060802 | MS.gene94549 | 0.801841 | 7.44E-49 | -1.69E-46 |
| MS.gene060870 | MS.gene94549 | 0.819248 | 1.28E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene94549 | 0.810292 | 1.24E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene94549 | 0.807002 | 6.25E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene94549 | 0.824998 | 5.96E-54 | -1.69E-46 |
| MS.gene06121 | MS.gene94549 | 0.80096 | 1.13E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94549.t1 | MTR_8g107060 | 89.912 | 684 | 41 | 9 | 1 | 673 | 1 | 667 | 0.0 | 1107 |
| MS.gene94549.t1 | MTR_8g107060 | 85.654 | 474 | 40 | 9 | 1 | 463 | 1 | 457 | 0.0 | 673 |
| MS.gene94549.t1 | MTR_6g088595 | 26.642 | 274 | 177 | 8 | 390 | 647 | 415 | 680 | 9.39e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94549.t1 | AT1G18190 | 46.254 | 694 | 325 | 11 | 1 | 673 | 1 | 667 | 1.94e-163 | 485 |
| MS.gene94549.t1 | AT2G19950 | 25.617 | 324 | 212 | 10 | 341 | 647 | 374 | 685 | 1.58e-14 | 77.8 |
| MS.gene94549.t1 | AT2G19950 | 25.617 | 324 | 212 | 10 | 341 | 647 | 377 | 688 | 1.82e-14 | 77.4 |
Find 155 sgRNAs with CRISPR-Local
Find 430 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTCTCTCCCTCTAATT+TGG | 0.162742 | 4.1:-428533 | None:intergenic |
| GGTAGGAGGGTTAGATGATT+TGG | 0.215534 | 4.1:-427786 | None:intergenic |
| AGTAATTCTGGTGAATTTAA+TGG | 0.240169 | 4.1:-428175 | None:intergenic |
| CAGAGGTTAGACTCTCTTAA+AGG | 0.251513 | 4.1:+427971 | MS.gene94549:CDS |
| CAACTGAAAACTGTGATAAA+AGG | 0.253903 | 4.1:+428280 | MS.gene94549:CDS |
| TTTCTTGCCAGAGTGAATTC+TGG | 0.261809 | 4.1:-433027 | None:intergenic |
| TGATAAAGTTGCACAATTAC+AGG | 0.276409 | 4.1:+431762 | MS.gene94549:CDS |
| TCTTACACGTTTAGCTAAAC+TGG | 0.279886 | 4.1:+429014 | MS.gene94549:CDS |
| CGTGAAGCTCCAGTTTGATT+AGG | 0.306354 | 4.1:-431444 | None:intergenic |
| TCCTCTTCCAGCAGTAATTC+TGG | 0.307191 | 4.1:-428187 | None:intergenic |
| TTTGAAAAGGGGTTCTTCTA+TGG | 0.327602 | 4.1:+428348 | MS.gene94549:CDS |
| AGGGACACCACTACCTGATT+TGG | 0.332817 | 4.1:-427651 | None:intergenic |
| ATACCTCAATTCGAAATATA+AGG | 0.334475 | 4.1:-432784 | None:intergenic |
| GTAGGAGGGTTAGATGATTT+GGG | 0.334545 | 4.1:-427785 | None:intergenic |
| GCAGGCAGTGTCGAGGTTGC+TGG | 0.336792 | 4.1:+432890 | MS.gene94549:intron |
| ATTGTTATCAGTTGGGAGTT+TGG | 0.342524 | 4.1:-427705 | None:intergenic |
| ACTGATAACAATGATTATAA+TGG | 0.347618 | 4.1:+427716 | MS.gene94549:CDS |
| CCTTGTTTGCCTTCATTTGT+GGG | 0.349044 | 4.1:+433148 | MS.gene94549:CDS |
| CACGTCACAGGCAAGGAAAC+TGG | 0.353827 | 4.1:+432318 | MS.gene94549:intron |
| ACGTGTAAGAATTTCCATTC+TGG | 0.361453 | 4.1:-429001 | None:intergenic |
| CAAATCATTAGATGTTGAAT+TGG | 0.365479 | 4.1:-428329 | None:intergenic |
| GTTCTCGGCGGCTTTAAGTT+TGG | 0.370618 | 4.1:-427432 | None:intergenic |
| CAAATCAAACCATGGCGAAT+TGG | 0.373004 | 4.1:+427402 | None:intergenic |
| GTAATTCTGGTGAATTTAAT+GGG | 0.379706 | 4.1:-428174 | None:intergenic |
| CAACATCTAATGATTTGAAA+AGG | 0.394443 | 4.1:+428335 | MS.gene94549:CDS |
| AACATCTAATGATTTGAAAA+GGG | 0.404734 | 4.1:+428336 | MS.gene94549:CDS |
| CAACGAGAGGCTTCAATTAG+AGG | 0.405870 | 4.1:+427601 | MS.gene94549:CDS |
| ATTGATGCTCCTCCCAAATC+AGG | 0.406561 | 4.1:+427638 | MS.gene94549:CDS |
| GGTGGATTTAGCATCAGTTT+CGG | 0.410217 | 4.1:-428080 | None:intergenic |
| AAAGGAGAAAGAAGAGAGAA+AGG | 0.412621 | 4.1:+428446 | MS.gene94549:CDS |
| ACCTTGTTTGCCTTCATTTG+TGG | 0.413395 | 4.1:+433147 | MS.gene94549:CDS |
| TCATCAAGTGACTTAGAATC+TGG | 0.414826 | 4.1:+432960 | MS.gene94549:CDS |
| AGTTGACTGCCAACATCTAC+AGG | 0.415643 | 4.1:-428262 | None:intergenic |
| GTGAACATGAGAGGGAAGAA+AGG | 0.415835 | 4.1:+428428 | MS.gene94549:CDS |
| GAATATAGTGGCCAAATTAG+AGG | 0.423712 | 4.1:+428522 | MS.gene94549:CDS |
| TATAATCATTGTTATCAGTT+GGG | 0.430994 | 4.1:-427712 | None:intergenic |
| CTTCTTCCGCTTCCACTGAT+AGG | 0.431977 | 4.1:+428041 | MS.gene94549:CDS |
| GCCAACATCTACAGGGAACT+TGG | 0.432798 | 4.1:-428254 | None:intergenic |
| AAGCCTTATATTTCGAATTG+AGG | 0.434217 | 4.1:+432781 | MS.gene94549:CDS |
| CTACCATTACAGACGGTGAT+TGG | 0.434974 | 4.1:+427804 | MS.gene94549:CDS |
| GGGACACCACTACCTGATTT+GGG | 0.443877 | 4.1:-427650 | None:intergenic |
| CGCCGAGAACATTCTCCATC+AGG | 0.444439 | 4.1:+427445 | MS.gene94549:CDS |
| CCTCTGCAAAGAGGTTGAAC+TGG | 0.458367 | 4.1:-427954 | None:intergenic |
| AATCAATGTTATCAAGGAAA+AGG | 0.460558 | 4.1:+428498 | MS.gene94549:CDS |
| AGTTGCACAATTACAGGAAA+AGG | 0.462451 | 4.1:+431768 | MS.gene94549:CDS |
| GGGAGGAGCATCAATACTAC+TGG | 0.462532 | 4.1:-427630 | None:intergenic |
| AACTGAAAACTGTGATAAAA+GGG | 0.464363 | 4.1:+428281 | MS.gene94549:CDS |
| CCATCGGATGAGGGTAGATC+TGG | 0.471208 | 4.1:+433200 | MS.gene94549:CDS |
| CACTCTGGCAAGAAACAGCT+GGG | 0.475094 | 4.1:+433035 | MS.gene94549:CDS |
| ACATTCTAGCCCATCGGATG+AGG | 0.478457 | 4.1:+433190 | MS.gene94549:CDS |
| AGTGGTAAATCTAGTGATGA+TGG | 0.478641 | 4.1:+428004 | MS.gene94549:CDS |
| TCACTCTGGCAAGAAACAGC+TGG | 0.479710 | 4.1:+433034 | MS.gene94549:CDS |
| TATAAATCACCCACAAATGA+AGG | 0.480480 | 4.1:-433157 | None:intergenic |
| TTGAGGAATCCTAATCAAAC+TGG | 0.483034 | 4.1:+431435 | MS.gene94549:CDS |
| AGCTCAACTTCAACTTCCGT+TGG | 0.487013 | 4.1:-432379 | None:intergenic |
| ACAGAAAGGCAATACCAGTA+AGG | 0.487654 | 4.1:+428209 | MS.gene94549:CDS |
| TTGCCGCTGCTCTCTCAGCT+AGG | 0.488439 | 4.1:-428471 | None:intergenic |
| GTTGAGACCAAGGTAGATCA+TGG | 0.490319 | 4.1:+428148 | MS.gene94549:CDS |
| ATCTGGTGCCGTGATCTCAT+TGG | 0.491967 | 4.1:+433217 | MS.gene94549:CDS |
| TGACTTAGAATCTGGATTGT+GGG | 0.493062 | 4.1:+432968 | MS.gene94549:CDS |
| GACGAGAACATGTCAGTCTC+AGG | 0.493799 | 4.1:+432912 | MS.gene94549:CDS |
| AAAAGCAATCAATGTTATCA+AGG | 0.496877 | 4.1:+428492 | MS.gene94549:CDS |
| GGAACTCAACGGCAAAATTG+TGG | 0.498403 | 4.1:+433114 | MS.gene94549:CDS |
| TTATAATCATTGTTATCAGT+TGG | 0.498482 | 4.1:-427713 | None:intergenic |
| TGCTAAATCCACCAGAGGAC+AGG | 0.500161 | 4.1:+428090 | MS.gene94549:CDS |
| ACTAACAGATTCCTGTCCTC+TGG | 0.501207 | 4.1:-428101 | None:intergenic |
| TGCCTGATGGAGAATGTTCT+CGG | 0.504796 | 4.1:-427447 | None:intergenic |
| GAACTCAACGGCAAAATTGT+GGG | 0.509128 | 4.1:+433115 | MS.gene94549:CDS |
| ATGCTGTAGCTAGCTTCAAA+AGG | 0.509152 | 4.1:+431691 | MS.gene94549:intron |
| GCAGCTTCAGAGCACTATGA+TGG | 0.516795 | 4.1:+428933 | MS.gene94549:CDS |
| ACATCTAATGATTTGAAAAG+GGG | 0.518633 | 4.1:+428337 | MS.gene94549:CDS |
| AAGTCACTTGATGATGAGGC+AGG | 0.519583 | 4.1:-432951 | None:intergenic |
| TTAAATGATCAGTCATCTGA+TGG | 0.521059 | 4.1:-432414 | None:intergenic |
| TGCCTTAAAATACGAGGCGC+AGG | 0.530043 | 4.1:-427866 | None:intergenic |
| AGTCCAATCACCGTCTGTAA+TGG | 0.531178 | 4.1:-427807 | None:intergenic |
| ATTCCTCTTGATATCAGAAA+CGG | 0.531281 | 4.1:-427915 | None:intergenic |
| TAGAGCTCAGAAGGAGCTTG+AGG | 0.532289 | 4.1:+431418 | MS.gene94549:intron |
| TCTTGAATTGATCTTTGAGA+GGG | 0.535675 | 4.1:-427670 | None:intergenic |
| ACCAGAATTACTGCTGGAAG+AGG | 0.536737 | 4.1:+428186 | MS.gene94549:CDS |
| AACAATGGAAGCTGTTGAGT+TGG | 0.537487 | 4.1:+428957 | MS.gene94549:CDS |
| AAATTCACCAGAATTACTGC+TGG | 0.539129 | 4.1:+428180 | MS.gene94549:CDS |
| TCTACCTTGGTCTCAACCAC+AGG | 0.540146 | 4.1:-428142 | None:intergenic |
| TCTGATTCAGATACGGACTC+TGG | 0.541807 | 4.1:+428385 | MS.gene94549:CDS |
| CAAGGAAAAGGAGAATATAG+TGG | 0.542419 | 4.1:+428510 | MS.gene94549:CDS |
| TCACCGTCTGTAATGGTAGG+AGG | 0.542961 | 4.1:-427800 | None:intergenic |
| AGAAAGGCAATACCAGTAAG+GGG | 0.544933 | 4.1:+428211 | MS.gene94549:CDS |
| GTGACTTAGAATCTGGATTG+TGG | 0.546448 | 4.1:+432967 | MS.gene94549:CDS |
| TGAATCAGAACTTCCATCAC+TGG | 0.547149 | 4.1:-428371 | None:intergenic |
| TGGGTGCCCATGATCTACCT+TGG | 0.548798 | 4.1:-428155 | None:intergenic |
| GAAGGAGATAGAAGAGCCAA+CGG | 0.549566 | 4.1:+432363 | MS.gene94549:CDS |
| CCAGATCTACCCTCATCCGA+TGG | 0.552413 | 4.1:-433200 | None:intergenic |
| CCCACAAATGAAGGCAAACA+AGG | 0.552936 | 4.1:-433148 | None:intergenic |
| CAGAAAGGCAATACCAGTAA+GGG | 0.554124 | 4.1:+428210 | MS.gene94549:CDS |
| TTCTTGAATTGATCTTTGAG+AGG | 0.554314 | 4.1:-427671 | None:intergenic |
| GGACGGACGGACTTGCCTGA+TGG | 0.555391 | 4.1:-427460 | None:intergenic |
| TATCCGTTTCTGATATCAAG+AGG | 0.555425 | 4.1:+427912 | MS.gene94549:CDS |
| TTCTGAAAGTGAACATGAGA+GGG | 0.561577 | 4.1:+428420 | MS.gene94549:CDS |
| GGTTCTTCTATGGCCAGTGA+TGG | 0.561688 | 4.1:+428358 | MS.gene94549:CDS |
| AAAACATAATAATACCAGAA+TGG | 0.563142 | 4.1:+428987 | MS.gene94549:CDS |
| TTCTAAGTCACTTGATGATG+AGG | 0.568130 | 4.1:-432955 | None:intergenic |
| TGATATTGAAATGACAAGGA+AGG | 0.568874 | 4.1:+432345 | MS.gene94549:CDS |
| AGCTAAACAACAAGCACAAG+AGG | 0.569063 | 4.1:+428582 | MS.gene94549:CDS |
| AACAGATTCCTGTCCTCTGG+TGG | 0.570849 | 4.1:-428098 | None:intergenic |
| AATATAGTGGCCAAATTAGA+GGG | 0.570966 | 4.1:+428523 | MS.gene94549:CDS |
| AGACTGCCTATCAGTGGAAG+CGG | 0.571112 | 4.1:-428047 | None:intergenic |
| GCCAAGTTCCCTGTAGATGT+TGG | 0.572119 | 4.1:+428253 | MS.gene94549:CDS |
| GTTCCACTGTACAGCTGCGA+GGG | 0.576044 | 4.1:-429205 | None:intergenic |
| GAGCACTATGATGGAAACAA+TGG | 0.577666 | 4.1:+428942 | MS.gene94549:CDS |
| CAGATCTACCCTCATCCGAT+GGG | 0.578444 | 4.1:-433199 | None:intergenic |
| GCTCCTCCCAAATCAGGTAG+TGG | 0.580464 | 4.1:+427644 | MS.gene94549:CDS |
| TGAATCACTCTCATCTGAGA+AGG | 0.584178 | 4.1:+432757 | MS.gene94549:CDS |
| CAATCACCGTCTGTAATGGT+AGG | 0.587007 | 4.1:-427803 | None:intergenic |
| TAAAATACGAGGCGCAGGCA+CGG | 0.588289 | 4.1:-427861 | None:intergenic |
| TACATTAGACTGCCTATCAG+TGG | 0.588488 | 4.1:-428053 | None:intergenic |
| TATGTTCTCCAATGAGATCA+CGG | 0.591089 | 4.1:-433225 | None:intergenic |
| CATTCTAGCCCATCGGATGA+GGG | 0.591091 | 4.1:+433191 | MS.gene94549:CDS |
| TAAACCTGTGGTTGAGACCA+AGG | 0.593088 | 4.1:+428138 | MS.gene94549:CDS |
| TGGAAGTTCTGATTCAGATA+CGG | 0.593981 | 4.1:+428378 | MS.gene94549:CDS |
| TAAATCTAGTGATGATGGCA+AGG | 0.595423 | 4.1:+428009 | MS.gene94549:CDS |
| TTGGAGAACATAAATAACAC+TGG | 0.599980 | 4.1:+433236 | MS.gene94549:CDS |
| CACCGTCTGTAATGGTAGGA+GGG | 0.602202 | 4.1:-427799 | None:intergenic |
| TTTAATACAGAAACAAGCTA+AGG | 0.604266 | 4.1:+432432 | MS.gene94549:CDS |
| ATTCTGAAAGTGAACATGAG+AGG | 0.605224 | 4.1:+428419 | MS.gene94549:CDS |
| AAGTCTAGAGAAAATACTTG+AGG | 0.605238 | 4.1:+428555 | MS.gene94549:CDS |
| GATGTCACATTCTAGCCCAT+CGG | 0.605593 | 4.1:+433184 | MS.gene94549:CDS |
| GGAAGAGATCCAATTCGCCA+TGG | 0.607085 | 4.1:-427411 | None:intergenic |
| ACTGCTGGAAGAGGACAGAA+AGG | 0.610482 | 4.1:+428195 | MS.gene94549:CDS |
| CTAAAAGCCAGAATTCACTC+TGG | 0.613940 | 4.1:+433020 | MS.gene94549:CDS |
| TCAAAAGAGTCTGTTCATGA+AGG | 0.614287 | 4.1:+429778 | MS.gene94549:CDS |
| CCAGTTCAACCTCTTTGCAG+AGG | 0.614997 | 4.1:+427954 | MS.gene94549:CDS |
| GATCCCTCGCAGCTGTACAG+TGG | 0.620209 | 4.1:+429202 | MS.gene94549:CDS |
| ACAGTGGAACCTTGAAGTAG+AGG | 0.622799 | 4.1:+429218 | MS.gene94549:CDS |
| AGAGTCTAACCTCTGCAAAG+AGG | 0.633980 | 4.1:-427963 | None:intergenic |
| GGCACGGCGTTAGAAGCAGA+AGG | 0.635582 | 4.1:-427845 | None:intergenic |
| TTGAGACCAAGGTAGATCAT+GGG | 0.643453 | 4.1:+428149 | MS.gene94549:CDS |
| GAAAGGCAATACCAGTAAGG+GGG | 0.650132 | 4.1:+428212 | MS.gene94549:CDS |
| TACACGTTTAGCTAAACTGG+AGG | 0.651008 | 4.1:+429017 | MS.gene94549:CDS |
| TTGAAGTTGAGCTCAAACGT+AGG | 0.651952 | 4.1:+432389 | MS.gene94549:CDS |
| GGTTCCACTGTACAGCTGCG+AGG | 0.655101 | 4.1:-429206 | None:intergenic |
| AACCCTCCTACCATTACAGA+CGG | 0.655393 | 4.1:+427797 | MS.gene94549:CDS |
| TAACACTTCTGATAAACCTG+TGG | 0.658996 | 4.1:+428126 | MS.gene94549:CDS |
| CACTTCGTAAGAACAACGAG+AGG | 0.664611 | 4.1:+427588 | MS.gene94549:CDS |
| TGACTCAGCAGGCAGTGTCG+AGG | 0.666460 | 4.1:+432883 | MS.gene94549:intron |
| AAGCTGATATTGAAATGACA+AGG | 0.671405 | 4.1:+432341 | MS.gene94549:CDS |
| AAAGGCAATACCAGTAAGGG+GGG | 0.672770 | 4.1:+428213 | MS.gene94549:CDS |
| TGAAAACTGTGATAAAAGGG+AGG | 0.690336 | 4.1:+428284 | MS.gene94549:CDS |
| TCAGATCGATCAACAAGCGG+CGG | 0.690403 | 4.1:+427562 | MS.gene94549:intron |
| GTTGACTGCCAACATCTACA+GGG | 0.691069 | 4.1:-428261 | None:intergenic |
| GATCCTAGCTGAGAGAGCAG+CGG | 0.698731 | 4.1:+428468 | MS.gene94549:CDS |
| GTTTGAACGAGAAATTCTTG+AGG | 0.701624 | 4.1:+431720 | MS.gene94549:CDS |
| GGTTCAGATCGATCAACAAG+CGG | 0.710542 | 4.1:+427559 | MS.gene94549:intron |
| ACACCACTACCTGATTTGGG+AGG | 0.718685 | 4.1:-427647 | None:intergenic |
| ACTCTGGCAAGAAACAGCTG+GGG | 0.721667 | 4.1:+433036 | MS.gene94549:CDS |
| ACTGATGCTAAATCCACCAG+AGG | 0.728447 | 4.1:+428085 | MS.gene94549:CDS |
| CTGATGGAGAATGTTCTCGG+CGG | 0.777389 | 4.1:-427444 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAAAAATCATAATTAAAAA+AGG | - | chr4.1:432120-432139 | None:intergenic | 10.0% |
| !! | TAGAAATTAAATAAGAAAAT+AGG | - | chr4.1:427513-427532 | None:intergenic | 10.0% |
| !! | TTAAAAAGTAAAATAAGAAA+TGG | - | chr4.1:429881-429900 | None:intergenic | 10.0% |
| !!! | AATAAACTTTTTTAACATAA+AGG | - | chr4.1:432724-432743 | None:intergenic | 10.0% |
| !!! | CTTTTTTAATTATGATTTTT+AGG | + | chr4.1:432118-432137 | MS.gene94549:intron | 10.0% |
| !! | AAAGATACATCTTAAAATTT+GGG | - | chr4.1:431316-431335 | None:intergenic | 15.0% |
| !! | ATTAAAAGTGAATACATAAA+AGG | + | chr4.1:430046-430065 | MS.gene94549:intron | 15.0% |
| !! | ATTTAATTATTATGTAGTGT+TGG | + | chr4.1:430814-430833 | MS.gene94549:intron | 15.0% |
| !! | CACAAAAAATGTTTAAAAAA+GGG | - | chr4.1:431600-431619 | None:intergenic | 15.0% |
| !! | CATGTTAAAATCAATTATAA+AGG | + | chr4.1:432059-432078 | MS.gene94549:intron | 15.0% |
| !! | CTACATAATAATTAAATCTT+TGG | - | chr4.1:430811-430830 | None:intergenic | 15.0% |
| !! | TCACAAAAAATGTTTAAAAA+AGG | - | chr4.1:431601-431620 | None:intergenic | 15.0% |
| !! | TGAAACAAATATATAAATCA+TGG | - | chr4.1:430157-430176 | None:intergenic | 15.0% |
| !!! | ACAATTAGATTATATTTTTG+TGG | + | chr4.1:433070-433089 | MS.gene94549:CDS | 15.0% |
| !!! | ATTGTTAATTTTTTTGTTGT+TGG | + | chr4.1:431083-431102 | MS.gene94549:intron | 15.0% |
| !!! | TTTTTAAACATTTTTTGTGA+AGG | + | chr4.1:431601-431620 | MS.gene94549:intron | 15.0% |
| !! | AAAACATAATAATACCAGAA+TGG | + | chr4.1:428987-429006 | MS.gene94549:CDS | 20.0% |
| !! | AAAAGTTTATTCTTGTTAAC+AGG | + | chr4.1:432733-432752 | MS.gene94549:intron | 20.0% |
| !! | AACATCTAATGATTTGAAAA+GGG | + | chr4.1:428336-428355 | MS.gene94549:CDS | 20.0% |
| !! | ACTGATAACAATGATTATAA+TGG | + | chr4.1:427716-427735 | MS.gene94549:CDS | 20.0% |
| !! | AGCTCTTAATAACAAAAAAA+AGG | + | chr4.1:430219-430238 | MS.gene94549:intron | 20.0% |
| !! | AGTTTGTAAAAATCTTTCTT+GGG | + | chr4.1:432574-432593 | MS.gene94549:intron | 20.0% |
| !! | ATGGTTGAAATAAAATATAC+TGG | - | chr4.1:430102-430121 | None:intergenic | 20.0% |
| !! | CAAAGATACATCTTAAAATT+TGG | - | chr4.1:431317-431336 | None:intergenic | 20.0% |
| !! | CTTAATAACAAAAAAAAGGT+TGG | + | chr4.1:430223-430242 | MS.gene94549:intron | 20.0% |
| !! | TATAATCATTGTTATCAGTT+GGG | - | chr4.1:427715-427734 | None:intergenic | 20.0% |
| !! | TTAGAATGAGAATCTTATAT+TGG | + | chr4.1:429629-429648 | MS.gene94549:intron | 20.0% |
| !! | TTATAATCATTGTTATCAGT+TGG | - | chr4.1:427716-427735 | None:intergenic | 20.0% |
| !!! | ATTCACTTTTAATTACACAA+CGG | - | chr4.1:430039-430058 | None:intergenic | 20.0% |
| !!! | CTTTACTTTGAAATTAATCA+CGG | + | chr4.1:428824-428843 | MS.gene94549:intron | 20.0% |
| !!! | TTTGTCTAGAAGTATAAAAT+TGG | + | chr4.1:431894-431913 | MS.gene94549:intron | 20.0% |
| ! | AAAAGCAATCAATGTTATCA+AGG | + | chr4.1:428492-428511 | MS.gene94549:CDS | 25.0% |
| ! | AACCACTTATAAGAAATACT+TGG | - | chr4.1:431243-431262 | None:intergenic | 25.0% |
| ! | AACTGAAAACTGTGATAAAA+GGG | + | chr4.1:428281-428300 | MS.gene94549:CDS | 25.0% |
| ! | AAGCTTGAAAATTATCCTTA+TGG | - | chr4.1:430256-430275 | None:intergenic | 25.0% |
| ! | AATCAATGTTATCAAGGAAA+AGG | + | chr4.1:428498-428517 | MS.gene94549:CDS | 25.0% |
| ! | AATGCAAAACTTAATGAAGT+TGG | - | chr4.1:432244-432263 | None:intergenic | 25.0% |
| ! | ACATCTAATGATTTGAAAAG+GGG | + | chr4.1:428337-428356 | MS.gene94549:CDS | 25.0% |
| ! | AGATAAGTTCTTCAGTTAAT+TGG | - | chr4.1:429478-429497 | None:intergenic | 25.0% |
| ! | AGCTTGAAAATTATCCTTAT+GGG | - | chr4.1:430255-430274 | None:intergenic | 25.0% |
| ! | AGTAATTCTGGTGAATTTAA+TGG | - | chr4.1:428178-428197 | None:intergenic | 25.0% |
| ! | ATACATCTTAAAATTTGGGT+TGG | - | chr4.1:431312-431331 | None:intergenic | 25.0% |
| ! | ATACCTCAATTCGAAATATA+AGG | - | chr4.1:432787-432806 | None:intergenic | 25.0% |
| ! | ATAGGAAATTGATTGATTGA+TGG | - | chr4.1:427495-427514 | None:intergenic | 25.0% |
| ! | ATATGCACAACAATTACTTT+AGG | + | chr4.1:430295-430314 | MS.gene94549:intron | 25.0% |
| ! | ATTGATTGATTGATGGAAAA+TGG | - | chr4.1:427488-427507 | None:intergenic | 25.0% |
| ! | CAAACAGAATGAAAACAATA+TGG | - | chr4.1:429915-429934 | None:intergenic | 25.0% |
| ! | CAAATCATTAGATGTTGAAT+TGG | - | chr4.1:428332-428351 | None:intergenic | 25.0% |
| ! | CAACATCTAATGATTTGAAA+AGG | + | chr4.1:428335-428354 | MS.gene94549:CDS | 25.0% |
| ! | CAGTTTGTAAAAATCTTTCT+TGG | + | chr4.1:432573-432592 | MS.gene94549:intron | 25.0% |
| ! | CTATCAAAAGACACAATTAA+TGG | - | chr4.1:430121-430140 | None:intergenic | 25.0% |
| ! | CTTTGCAAATTGGTTATTTA+GGG | + | chr4.1:431332-431351 | MS.gene94549:intron | 25.0% |
| ! | GATAATCTTGTAAATGTTTG+TGG | + | chr4.1:428704-428723 | MS.gene94549:intron | 25.0% |
| ! | GATATTCTCAAACAAAGAAA+GGG | - | chr4.1:430707-430726 | None:intergenic | 25.0% |
| ! | GCAAAAATATTACATCTAAC+TGG | - | chr4.1:432474-432493 | None:intergenic | 25.0% |
| ! | GTAATTCTGGTGAATTTAAT+GGG | - | chr4.1:428177-428196 | None:intergenic | 25.0% |
| ! | TAAATAGTTTCAACCTCTAA+GGG | + | chr4.1:432093-432112 | MS.gene94549:intron | 25.0% |
| ! | TAAGATGTATCTTTGCAAAT+TGG | + | chr4.1:431322-431341 | MS.gene94549:intron | 25.0% |
| ! | TAATTCAACCATTACAAAAC+CGG | - | chr4.1:430980-430999 | None:intergenic | 25.0% |
| ! | TCTTTGCAAATTGGTTATTT+AGG | + | chr4.1:431331-431350 | MS.gene94549:intron | 25.0% |
| ! | TGGAAAATGAATGAACATAA+CGG | - | chr4.1:431817-431836 | None:intergenic | 25.0% |
| ! | TGTTTAAAAAAGGGAATATG+TGG | - | chr4.1:431591-431610 | None:intergenic | 25.0% |
| ! | TTATGATATGTTATTGGATC+AGG | + | chr4.1:429720-429739 | MS.gene94549:intron | 25.0% |
| ! | TTGCAATCACAAAATCTTTA+GGG | - | chr4.1:429591-429610 | None:intergenic | 25.0% |
| ! | TTTAATACAGAAACAAGCTA+AGG | + | chr4.1:432432-432451 | MS.gene94549:CDS | 25.0% |
| ! | TTTGCAATCACAAAATCTTT+AGG | - | chr4.1:429592-429611 | None:intergenic | 25.0% |
| !! | CATTAATTGTGTCTTTTGAT+AGG | + | chr4.1:430119-430138 | MS.gene94549:intron | 25.0% |
| !! | CTTAAAGGAGAAAATTTTAG+TGG | + | chr4.1:427986-428005 | MS.gene94549:CDS | 25.0% |
| !! | GCAACGTATTTCATTATTTT+TGG | + | chr4.1:431860-431879 | MS.gene94549:intron | 25.0% |
| !! | TCATAGAATACAAGATGTTT+TGG | + | chr4.1:429283-429302 | MS.gene94549:intron | 25.0% |
| !! | TGTATTAAATCTTTGAAAGC+AGG | + | chr4.1:429994-430013 | MS.gene94549:intron | 25.0% |
| !! | TGTTGCTTATGATATGTTAT+TGG | + | chr4.1:429714-429733 | MS.gene94549:intron | 25.0% |
| !! | TTTAAGTTCTTGTGTTATAC+TGG | + | chr4.1:428648-428667 | MS.gene94549:intron | 25.0% |
| !!! | AAAATAGACTTGTTACTACT+TGG | + | chr4.1:429341-429360 | MS.gene94549:intron | 25.0% |
| !!! | AACAAAAAAAAGGTTGGTAT+AGG | + | chr4.1:430229-430248 | MS.gene94549:intron | 25.0% |
| !!! | AAGAATCACTGTTTTAATTC+AGG | + | chr4.1:432502-432521 | MS.gene94549:intron | 25.0% |
| !!! | ATGTTGATTCAACGTTTTTA+AGG | + | chr4.1:429041-429060 | MS.gene94549:intron | 25.0% |
| !!! | ATTTGTTCTCTGAAACATTA+GGG | + | chr4.1:429825-429844 | MS.gene94549:intron | 25.0% |
| !!! | TTAGATTATATTTTTGTGGC+TGG | + | chr4.1:433074-433093 | MS.gene94549:CDS | 25.0% |
| !!! | TTTTTTTTCTCGAAGTAATC+AGG | + | chr4.1:430076-430095 | MS.gene94549:intron | 25.0% |
| AAAAATGTCCTAAATACTGC+TGG | + | chr4.1:429524-429543 | MS.gene94549:intron | 30.0% | |
| AAAATGTCCTAAATACTGCT+GGG | + | chr4.1:429525-429544 | MS.gene94549:intron | 30.0% | |
| AAACAGTGAAAACTTGATGA+GGG | - | chr4.1:428781-428800 | None:intergenic | 30.0% | |
| AAATCAATGACTTTGCAAAG+CGG | - | chr4.1:429809-429828 | None:intergenic | 30.0% | |
| AAATTAACAATCAGACCCTA+TGG | - | chr4.1:431074-431093 | None:intergenic | 30.0% | |
| AACTGTTTGAACAAAATACG+CGG | + | chr4.1:430348-430367 | MS.gene94549:intron | 30.0% | |
| AAGCAGGAAACAAATTGAAA+AGG | + | chr4.1:430010-430029 | MS.gene94549:intron | 30.0% | |
| AAGCTGATATTGAAATGACA+AGG | + | chr4.1:432341-432360 | MS.gene94549:CDS | 30.0% | |
| AAGTCTAGAGAAAATACTTG+AGG | + | chr4.1:428555-428574 | MS.gene94549:CDS | 30.0% | |
| AATATAGTGGCCAAATTAGA+GGG | + | chr4.1:428523-428542 | MS.gene94549:CDS | 30.0% | |
| AATTAAAAAAGGTCCCTTAG+AGG | - | chr4.1:432109-432128 | None:intergenic | 30.0% | |
| AATTAACAATCAGACCCTAT+GGG | - | chr4.1:431073-431092 | None:intergenic | 30.0% | |
| AATTCACCCAAACACATAAT+TGG | + | chr4.1:432683-432702 | MS.gene94549:intron | 30.0% | |
| AGCTTGTAGACTAATACTTA+AGG | - | chr4.1:430203-430222 | None:intergenic | 30.0% | |
| ATCAACAAATCAGTCTGATA+TGG | + | chr4.1:432613-432632 | MS.gene94549:intron | 30.0% | |
| ATTCACCCAAACACATAATT+GGG | + | chr4.1:432684-432703 | MS.gene94549:intron | 30.0% | |
| ATTCCTCTTGATATCAGAAA+CGG | - | chr4.1:427918-427937 | None:intergenic | 30.0% | |
| ATTGATTGATGGAAAATGGA+CGG | - | chr4.1:427484-427503 | None:intergenic | 30.0% | |
| CAAAGTAAAGTCATCCTATT+AGG | - | chr4.1:428814-428833 | None:intergenic | 30.0% | |
| CAACTGAAAACTGTGATAAA+AGG | + | chr4.1:428280-428299 | MS.gene94549:CDS | 30.0% | |
| CTAAAAATACCTCTACTTCA+AGG | - | chr4.1:429230-429249 | None:intergenic | 30.0% | |
| GATTCTTTCACATTCAGTTA+AGG | - | chr4.1:432037-432056 | None:intergenic | 30.0% | |
| GCATATCTCATCATTCAAAT+CGG | + | chr4.1:431264-431283 | MS.gene94549:intron | 30.0% | |
| GGATATTCTCAAACAAAGAA+AGG | - | chr4.1:430708-430727 | None:intergenic | 30.0% | |
| GTAAATAGTTTCAACCTCTA+AGG | + | chr4.1:432092-432111 | MS.gene94549:intron | 30.0% | |
| TAACCCAAATTCGAATAATG+TGG | - | chr4.1:430449-430468 | None:intergenic | 30.0% | |
| TACTACAACAAAAGAAACAG+AGG | - | chr4.1:431922-431941 | None:intergenic | 30.0% | |
| TATAAATCACCCACAAATGA+AGG | - | chr4.1:433160-433179 | None:intergenic | 30.0% | |
| TCAAAGTCTATGATTTCTCT+TGG | + | chr4.1:432271-432290 | MS.gene94549:intron | 30.0% | |
| TCACTGATAAATGTATGGAT+TGG | + | chr4.1:429151-429170 | MS.gene94549:intron | 30.0% | |
| TGAAATATCATAGCTCTTCA+TGG | - | chr4.1:431837-431856 | None:intergenic | 30.0% | |
| TGATAAAGTTGCACAATTAC+AGG | + | chr4.1:431762-431781 | MS.gene94549:CDS | 30.0% | |
| TGATATTGAAATGACAAGGA+AGG | + | chr4.1:432345-432364 | MS.gene94549:CDS | 30.0% | |
| TGCCAAGTATTTCTTATAAG+TGG | + | chr4.1:431238-431257 | MS.gene94549:intron | 30.0% | |
| TGGTACTTATCACAAAGATT+TGG | + | chr4.1:429361-429380 | MS.gene94549:intron | 30.0% | |
| TTAAATGATCAGTCATCTGA+TGG | - | chr4.1:432417-432436 | None:intergenic | 30.0% | |
| TTAGTATGCAATTAAAGGAC+AGG | + | chr4.1:430371-430390 | MS.gene94549:intron | 30.0% | |
| TTAGTTACTGAAGAGAACAA+TGG | + | chr4.1:430323-430342 | MS.gene94549:intron | 30.0% | |
| TTCTTGAATTGATCTTTGAG+AGG | - | chr4.1:427674-427693 | None:intergenic | 30.0% | |
| TTGAGATTATGTTGTGATGA+GGG | + | chr4.1:431366-431385 | MS.gene94549:intron | 30.0% | |
| TTGATATTGTAACTTGAGCT+AGG | + | chr4.1:430613-430632 | MS.gene94549:intron | 30.0% | |
| TTGGAGAACATAAATAACAC+TGG | + | chr4.1:433236-433255 | MS.gene94549:CDS | 30.0% | |
| ! | AAATTGGTTATTTAGGGTAC+TGG | + | chr4.1:431338-431357 | MS.gene94549:intron | 30.0% |
| ! | AAGCCTTATATTTCGAATTG+AGG | + | chr4.1:432781-432800 | MS.gene94549:CDS | 30.0% |
| ! | AAGTTTGCTTCAAACCTAAA+TGG | - | chr4.1:430397-430416 | None:intergenic | 30.0% |
| ! | ACATTATTCGAATTTGGGTT+AGG | + | chr4.1:430448-430467 | MS.gene94549:intron | 30.0% |
| ! | AGAGAGCATAAGTTTAAGAA+AGG | - | chr4.1:431629-431648 | None:intergenic | 30.0% |
| ! | CTATTTTGCCTTAAAATACG+AGG | - | chr4.1:427875-427894 | None:intergenic | 30.0% |
| ! | GAGAGCATAAGTTTAAGAAA+GGG | - | chr4.1:431628-431647 | None:intergenic | 30.0% |
| ! | TCTTGAATTGATCTTTGAGA+GGG | - | chr4.1:427673-427692 | None:intergenic | 30.0% |
| ! | TGTGGCATTTTCTTTTTGTT+TGG | + | chr4.1:431565-431584 | MS.gene94549:intron | 30.0% |
| !! | GATTTGTTCTCTGAAACATT+AGG | + | chr4.1:429824-429843 | MS.gene94549:intron | 30.0% |
| !! | GGTTTTGTAATGATTGAGTT+GGG | + | chr4.1:431285-431304 | MS.gene94549:intron | 30.0% |
| !! | GGTTTTGTAATGGTTGAATT+AGG | + | chr4.1:430979-430998 | MS.gene94549:intron | 30.0% |
| !! | GTTTTGTAATGATTGAGTTG+GGG | + | chr4.1:431286-431305 | MS.gene94549:intron | 30.0% |
| !! | TTGAGGTATGCTTTTTACTA+AGG | + | chr4.1:432798-432817 | MS.gene94549:intron | 30.0% |
| !! | TTTTCTGAAAAGGAACTCAA+CGG | + | chr4.1:433103-433122 | MS.gene94549:CDS | 30.0% |
| !!! | AGTTGCAGTAGTAGTTTTAA+GGG | - | chr4.1:427759-427778 | None:intergenic | 30.0% |
| AAACTTGTGTTAGGCTTCTA+TGG | + | chr4.1:430411-430430 | MS.gene94549:intron | 35.0% | |
| AAAGGAGAAAGAAGAGAGAA+AGG | + | chr4.1:428446-428465 | MS.gene94549:CDS | 35.0% | |
| AAATTCACCAGAATTACTGC+TGG | + | chr4.1:428180-428199 | MS.gene94549:CDS | 35.0% | |
| AACTTGTGTTAGGCTTCTAT+GGG | + | chr4.1:430412-430431 | MS.gene94549:intron | 35.0% | |
| AAGCAAAACTACCATAGTTC+AGG | - | chr4.1:430773-430792 | None:intergenic | 35.0% | |
| AATCACTGAGAACATTAAGC+AGG | - | chr4.1:428740-428759 | None:intergenic | 35.0% | |
| AATTAAAGGACAGGCCATTT+AGG | + | chr4.1:430380-430399 | MS.gene94549:intron | 35.0% | |
| ACAGTTACTCAAGTACTTCA+AGG | + | chr4.1:431966-431985 | MS.gene94549:intron | 35.0% | |
| ACCAGTTTCAGCAAAGAATA+GGG | - | chr4.1:431485-431504 | None:intergenic | 35.0% | |
| ACGTGTAAGAATTTCCATTC+TGG | - | chr4.1:429004-429023 | None:intergenic | 35.0% | |
| AGGGTCTTAGAATTTGGATT+GGG | - | chr4.1:431005-431024 | None:intergenic | 35.0% | |
| AGTGGTAAATCTAGTGATGA+TGG | + | chr4.1:428004-428023 | MS.gene94549:CDS | 35.0% | |
| AGTTGCACAATTACAGGAAA+AGG | + | chr4.1:431768-431787 | MS.gene94549:CDS | 35.0% | |
| ATTCTATGAATCGTGAGAAG+TGG | - | chr4.1:429272-429291 | None:intergenic | 35.0% | |
| ATTGTTATCAGTTGGGAGTT+TGG | - | chr4.1:427708-427727 | None:intergenic | 35.0% | |
| CAAACAGTGAAAACTTGATG+AGG | - | chr4.1:428782-428801 | None:intergenic | 35.0% | |
| CAAGGAAAAGGAGAATATAG+TGG | + | chr4.1:428510-428529 | MS.gene94549:CDS | 35.0% | |
| CAAGTCCCAATTATGTGTTT+GGG | - | chr4.1:432692-432711 | None:intergenic | 35.0% | |
| CAGGAAACAAATTGAAAAGG+TGG | + | chr4.1:430013-430032 | MS.gene94549:intron | 35.0% | |
| CAGTTACTCAAGTACTTCAA+GGG | + | chr4.1:431967-431986 | MS.gene94549:intron | 35.0% | |
| CTTTAATTGTGATGCCAGTT+TGG | - | chr4.1:429445-429464 | None:intergenic | 35.0% | |
| GAATATAGTGGCCAAATTAG+AGG | + | chr4.1:428522-428541 | MS.gene94549:CDS | 35.0% | |
| GAGCCACATTATTCGAATTT+GGG | + | chr4.1:430443-430462 | MS.gene94549:intron | 35.0% | |
| GCTTAATGTTCTCAGTGATT+TGG | + | chr4.1:428740-428759 | MS.gene94549:intron | 35.0% | |
| GCTTGTCACTGATAAATGTA+TGG | + | chr4.1:429146-429165 | MS.gene94549:intron | 35.0% | |
| GTTGAGATTATGTTGTGATG+AGG | + | chr4.1:431365-431384 | MS.gene94549:intron | 35.0% | |
| GTTTGAACGAGAAATTCTTG+AGG | + | chr4.1:431720-431739 | MS.gene94549:CDS | 35.0% | |
| GTTTGAGAACTTCTCCTAAT+AGG | + | chr4.1:428797-428816 | MS.gene94549:intron | 35.0% | |
| GTTTGAGAATATCCTTGACT+TGG | + | chr4.1:430714-430733 | MS.gene94549:intron | 35.0% | |
| TAACACTTCTGATAAACCTG+TGG | + | chr4.1:428126-428145 | MS.gene94549:CDS | 35.0% | |
| TACAATATCAAAGCCTGTTC+TGG | - | chr4.1:430604-430623 | None:intergenic | 35.0% | |
| TACCAGTTTCAGCAAAGAAT+AGG | - | chr4.1:431486-431505 | None:intergenic | 35.0% | |
| TAGGATAGGGTCTTAGAATT+TGG | - | chr4.1:431011-431030 | None:intergenic | 35.0% | |
| TAGGGTCTTAGAATTTGGAT+TGG | - | chr4.1:431006-431025 | None:intergenic | 35.0% | |
| TATCCGTTTCTGATATCAAG+AGG | + | chr4.1:427912-427931 | MS.gene94549:CDS | 35.0% | |
| TATGTTCTCCAATGAGATCA+CGG | - | chr4.1:433228-433247 | None:intergenic | 35.0% | |
| TCAAAAGAGTCTGTTCATGA+AGG | + | chr4.1:429778-429797 | MS.gene94549:CDS | 35.0% | |
| TCATCAAGTGACTTAGAATC+TGG | + | chr4.1:432960-432979 | MS.gene94549:CDS | 35.0% | |
| TCTTACACGTTTAGCTAAAC+TGG | + | chr4.1:429014-429033 | MS.gene94549:CDS | 35.0% | |
| TGAAAACTGTGATAAAAGGG+AGG | + | chr4.1:428284-428303 | MS.gene94549:CDS | 35.0% | |
| TGACTTAGAATCTGGATTGT+GGG | + | chr4.1:432968-432987 | MS.gene94549:CDS | 35.0% | |
| TGCAGAACTCAGACAAAAAA+CGG | + | chr4.1:429753-429772 | MS.gene94549:CDS | 35.0% | |
| TGGAAATTTCGCCTTAATTG+CGG | + | chr4.1:430834-430853 | MS.gene94549:intron | 35.0% | |
| TGTATAGCTTAAAGCACACA+TGG | + | chr4.1:429077-429096 | MS.gene94549:intron | 35.0% | |
| TTAGGATATCCTCAACTCTT+GGG | - | chr4.1:430662-430681 | None:intergenic | 35.0% | |
| TTCCTCTTAAAATCTCAGCT+CGG | - | chr4.1:431542-431561 | None:intergenic | 35.0% | |
| TTCTTTCTCTCCCTCTAATT+TGG | - | chr4.1:428536-428555 | None:intergenic | 35.0% | |
| TTGAGGAATCCTAATCAAAC+TGG | + | chr4.1:431435-431454 | MS.gene94549:CDS | 35.0% | |
| TTTGAAAAGGGGTTCTTCTA+TGG | + | chr4.1:428348-428367 | MS.gene94549:CDS | 35.0% | |
| ! | ATTCTGAAAGTGAACATGAG+AGG | + | chr4.1:428419-428438 | MS.gene94549:CDS | 35.0% |
| ! | GAGTAACTGTGTTTTGCATT+TGG | - | chr4.1:431956-431975 | None:intergenic | 35.0% |
| ! | GTTTGAAGCAAACTTGTGTT+AGG | + | chr4.1:430402-430421 | MS.gene94549:intron | 35.0% |
| ! | TAACTTTTGTAGAGCTCAGA+AGG | + | chr4.1:431409-431428 | MS.gene94549:intron | 35.0% |
| ! | TATGGTTTTCAGAATCAAGC+AGG | + | chr4.1:432631-432650 | MS.gene94549:intron | 35.0% |
| ! | TGGAAGTTCTGATTCAGATA+CGG | + | chr4.1:428378-428397 | MS.gene94549:CDS | 35.0% |
| ! | TTCTGAAAGTGAACATGAGA+GGG | + | chr4.1:428420-428439 | MS.gene94549:CDS | 35.0% |
| !! | AAGTGTTGCTTATAAGTGGT+GGG | + | chr4.1:430936-430955 | MS.gene94549:intron | 35.0% |
| !! | AGATTTTAAGAGGAAGTCTG+TGG | + | chr4.1:431547-431566 | MS.gene94549:intron | 35.0% |
| !! | CAGTTGCAGTAGTAGTTTTA+AGG | - | chr4.1:427760-427779 | None:intergenic | 35.0% |
| !! | CCTGTTCTGGATTTGTTATT+GGG | - | chr4.1:430591-430610 | None:intergenic | 35.0% |
| !! | CGGTTTTGTAATGATTGAGT+TGG | + | chr4.1:431284-431303 | MS.gene94549:intron | 35.0% |
| !! | TAAATCTAGTGATGATGGCA+AGG | + | chr4.1:428009-428028 | MS.gene94549:CDS | 35.0% |
| !! | TTCTAAGTCACTTGATGATG+AGG | - | chr4.1:432958-432977 | None:intergenic | 35.0% |
| !!! | GTTGCAGTAGTAGTTTTAAG+GGG | - | chr4.1:427758-427777 | None:intergenic | 35.0% |
| !!! | TGAATTCTGGCTTTTAGCAT+AGG | - | chr4.1:433017-433036 | None:intergenic | 35.0% |
| AACAATGGAAGCTGTTGAGT+TGG | + | chr4.1:428957-428976 | MS.gene94549:CDS | 40.0% | |
| ACAACAAAAGCTAGCTCGTA+TGG | + | chr4.1:430479-430498 | MS.gene94549:intron | 40.0% | |
| ACAGAAAGGCAATACCAGTA+AGG | + | chr4.1:428209-428228 | MS.gene94549:CDS | 40.0% | |
| ACCAACACGTCAAAAAGATC+AGG | - | chr4.1:428874-428893 | None:intergenic | 40.0% | |
| ACCCTATTCTTTGCTGAAAC+TGG | + | chr4.1:431481-431500 | MS.gene94549:intron | 40.0% | |
| ACTACTCTTACCCAGATATG+AGG | - | chr4.1:429683-429702 | None:intergenic | 40.0% | |
| AGAAAGGCAATACCAGTAAG+GGG | + | chr4.1:428211-428230 | MS.gene94549:CDS | 40.0% | |
| AGCTAAACAACAAGCACAAG+AGG | + | chr4.1:428582-428601 | MS.gene94549:CDS | 40.0% | |
| AGGATGTTTAGCGTAGGATA+TGG | + | chr4.1:428682-428701 | MS.gene94549:intron | 40.0% | |
| ATCTGTTCGTGCTCATTAAG+GGG | - | chr4.1:430559-430578 | None:intergenic | 40.0% | |
| ATGAGGATGACACAAGAGTT+TGG | - | chr4.1:429666-429685 | None:intergenic | 40.0% | |
| ATTGATGGAAAATGGACGGA+CGG | - | chr4.1:427480-427499 | None:intergenic | 40.0% | |
| CACATTCAGTTAAGGTCAAG+CGG | - | chr4.1:432029-432048 | None:intergenic | 40.0% | |
| CACCACTTATAAGCAACACT+TGG | - | chr4.1:430937-430956 | None:intergenic | 40.0% | |
| CAGAAAGGCAATACCAGTAA+GGG | + | chr4.1:428210-428229 | MS.gene94549:CDS | 40.0% | |
| CAGACTCTGAATCTAATGTC+TGG | + | chr4.1:432153-432172 | MS.gene94549:intron | 40.0% | |
| CAGAGGTTAGACTCTCTTAA+AGG | + | chr4.1:427971-427990 | MS.gene94549:CDS | 40.0% | |
| CATCTGTTCGTGCTCATTAA+GGG | - | chr4.1:430560-430579 | None:intergenic | 40.0% | |
| CCCAATAACAAATCCAGAAC+AGG | + | chr4.1:430588-430607 | MS.gene94549:intron | 40.0% | |
| CCTAAGAACACACATCAACT+AGG | + | chr4.1:430677-430696 | MS.gene94549:intron | 40.0% | |
| CGCGGTTAGTATGCAATTAA+AGG | + | chr4.1:430366-430385 | MS.gene94549:intron | 40.0% | |
| CTAAAAGCCAGAATTCACTC+TGG | + | chr4.1:433020-433039 | MS.gene94549:CDS | 40.0% | |
| CTTAGGATATCCTCAACTCT+TGG | - | chr4.1:430663-430682 | None:intergenic | 40.0% | |
| CTTCTGTAGATCCTGAACTA+TGG | + | chr4.1:430759-430778 | MS.gene94549:intron | 40.0% | |
| CTTGTGTCATCCTCATATCT+GGG | + | chr4.1:429670-429689 | MS.gene94549:intron | 40.0% | |
| GAACTCAACGGCAAAATTGT+GGG | + | chr4.1:433115-433134 | MS.gene94549:CDS | 40.0% | |
| GCAAGTCCCAATTATGTGTT+TGG | - | chr4.1:432693-432712 | None:intergenic | 40.0% | |
| GCGACATAATATGACCAAAC+TGG | + | chr4.1:429428-429447 | MS.gene94549:intron | 40.0% | |
| GGAGCCACATTATTCGAATT+TGG | + | chr4.1:430442-430461 | MS.gene94549:intron | 40.0% | |
| GTAGGAGGGTTAGATGATTT+GGG | - | chr4.1:427788-427807 | None:intergenic | 40.0% | |
| GTGACTTAGAATCTGGATTG+TGG | + | chr4.1:432967-432986 | MS.gene94549:CDS | 40.0% | |
| TACACGTTTAGCTAAACTGG+AGG | + | chr4.1:429017-429036 | MS.gene94549:CDS | 40.0% | |
| TACATTAGACTGCCTATCAG+TGG | - | chr4.1:428056-428075 | None:intergenic | 40.0% | |
| TATGAATCGTGAGAAGTGGA+TGG | - | chr4.1:429268-429287 | None:intergenic | 40.0% | |
| TCCTCTTAAAATCTCAGCTC+GGG | - | chr4.1:431541-431560 | None:intergenic | 40.0% | |
| TCTTGTGTCATCCTCATATC+TGG | + | chr4.1:429669-429688 | MS.gene94549:intron | 40.0% | |
| TGAATCACTCTCATCTGAGA+AGG | + | chr4.1:432757-432776 | MS.gene94549:CDS | 40.0% | |
| TGAATCAGAACTTCCATCAC+TGG | - | chr4.1:428374-428393 | None:intergenic | 40.0% | |
| TGGAAATTCCGCCTTAATTG+CGG | + | chr4.1:431103-431122 | MS.gene94549:intron | 40.0% | |
| TTGAAGTTGAGCTCAAACGT+AGG | + | chr4.1:432389-432408 | MS.gene94549:CDS | 40.0% | |
| TTGAGACCAAGGTAGATCAT+GGG | + | chr4.1:428149-428168 | MS.gene94549:CDS | 40.0% | |
| TTTCAGTCCCAGCAGTATTT+AGG | - | chr4.1:429535-429554 | None:intergenic | 40.0% | |
| TTTCTTGCCAGAGTGAATTC+TGG | - | chr4.1:433030-433049 | None:intergenic | 40.0% | |
| ! | ACATAATTGGGACTTGCTTC+AGG | + | chr4.1:432696-432715 | MS.gene94549:intron | 40.0% |
| ! | ACATGGACTACTTTGACCTT+TGG | + | chr4.1:430521-430540 | MS.gene94549:intron | 40.0% |
| ! | ACCTGATCTTTTTGACGTGT+TGG | + | chr4.1:428870-428889 | MS.gene94549:intron | 40.0% |
| ! | ACCTTGTTTGCCTTCATTTG+TGG | + | chr4.1:433147-433166 | MS.gene94549:CDS | 40.0% |
| ! | ACGGTCTAGATCACTGTTTT+GGG | + | chr4.1:428843-428862 | MS.gene94549:intron | 40.0% |
| ! | AGGAATGCTCGAGTTTTACA+TGG | + | chr4.1:430504-430523 | MS.gene94549:intron | 40.0% |
| ! | CATGGACTACTTTGACCTTT+GGG | + | chr4.1:430522-430541 | MS.gene94549:intron | 40.0% |
| ! | CCTAGTTGATGTGTGTTCTT+AGG | - | chr4.1:430680-430699 | None:intergenic | 40.0% |
| ! | CCTTGTTTGCCTTCATTTGT+GGG | + | chr4.1:433148-433167 | MS.gene94549:CDS | 40.0% |
| ! | CTAACTGCAGATCTAGGATA+GGG | - | chr4.1:431024-431043 | None:intergenic | 40.0% |
| ! | GAGCACTATGATGGAAACAA+TGG | + | chr4.1:428942-428961 | MS.gene94549:CDS | 40.0% |
| ! | GGTGGATTTAGCATCAGTTT+CGG | - | chr4.1:428083-428102 | None:intergenic | 40.0% |
| ! | TAGGCTTCTATGGGTTTTTC+AGG | + | chr4.1:430421-430440 | MS.gene94549:intron | 40.0% |
| ! | TTATACTGGTTATGCTCAGC+AGG | + | chr4.1:428662-428681 | MS.gene94549:intron | 40.0% |
| !! | AGAATATCCTTGACTTGGCA+AGG | + | chr4.1:430719-430738 | MS.gene94549:intron | 40.0% |
| !! | ATTTTCACGATTGACTCAGC+AGG | + | chr4.1:432872-432891 | MS.gene94549:intron | 40.0% |
| !! | CAAGTGTTGCTTATAAGTGG+TGG | + | chr4.1:430935-430954 | MS.gene94549:intron | 40.0% |
| !! | CATTACAAAACCGGCTTGTA+AGG | - | chr4.1:430971-430990 | None:intergenic | 40.0% |
| !! | CTGGTGCAGTTTTTCTGAAA+AGG | + | chr4.1:433093-433112 | MS.gene94549:CDS | 40.0% |
| !! | CTTACAAGCCGGTTTTGTAA+TGG | + | chr4.1:430969-430988 | MS.gene94549:intron | 40.0% |
| !! | GCCTGTTCTGGATTTGTTAT+TGG | - | chr4.1:430592-430611 | None:intergenic | 40.0% |
| !!! | AGCTAGCTTTTGTTGTGAGT+TGG | - | chr4.1:430475-430494 | None:intergenic | 40.0% |
| AAAAGCTAGCTCGTATGGTG+AGG | + | chr4.1:430484-430503 | MS.gene94549:intron | 45.0% | |
| AAAGGCAATACCAGTAAGGG+GGG | + | chr4.1:428213-428232 | MS.gene94549:CDS | 45.0% | |
| AACCCTCCTACCATTACAGA+CGG | + | chr4.1:427797-427816 | MS.gene94549:CDS | 45.0% | |
| ACAGTGGAACCTTGAAGTAG+AGG | + | chr4.1:429218-429237 | MS.gene94549:CDS | 45.0% | |
| ACCAGAATTACTGCTGGAAG+AGG | + | chr4.1:428186-428205 | MS.gene94549:CDS | 45.0% | |
| ACTAACAGATTCCTGTCCTC+TGG | - | chr4.1:428104-428123 | None:intergenic | 45.0% | |
| ACTCAAGTACTTCAAGGGTG+AGG | + | chr4.1:431972-431991 | MS.gene94549:intron | 45.0% | |
| ACTGATGCTAAATCCACCAG+AGG | + | chr4.1:428085-428104 | MS.gene94549:CDS | 45.0% | |
| ACTTTATCAACCCCCCTTAC+TGG | - | chr4.1:428226-428245 | None:intergenic | 45.0% | |
| AGAGTCTAACCTCTGCAAAG+AGG | - | chr4.1:427966-427985 | None:intergenic | 45.0% | |
| AGCTCAACTTCAACTTCCGT+TGG | - | chr4.1:432382-432401 | None:intergenic | 45.0% | |
| AGTCCAATCACCGTCTGTAA+TGG | - | chr4.1:427810-427829 | None:intergenic | 45.0% | |
| AGTTGACTGCCAACATCTAC+AGG | - | chr4.1:428265-428284 | None:intergenic | 45.0% | |
| ATAAGCAACACTTGGCGATG+TGG | - | chr4.1:430929-430948 | None:intergenic | 45.0% | |
| ATTGATGCTCCTCCCAAATC+AGG | + | chr4.1:427638-427657 | MS.gene94549:CDS | 45.0% | |
| CAACGAGAGGCTTCAATTAG+AGG | + | chr4.1:427601-427620 | MS.gene94549:CDS | 45.0% | |
| CAATCACCGTCTGTAATGGT+AGG | - | chr4.1:427806-427825 | None:intergenic | 45.0% | |
| CACTTCGTAAGAACAACGAG+AGG | + | chr4.1:427588-427607 | MS.gene94549:CDS | 45.0% | |
| CAGTCCAAATGCCGCAATTA+AGG | - | chr4.1:430848-430867 | None:intergenic | 45.0% | |
| CCCACAAATGAAGGCAAACA+AGG | - | chr4.1:433151-433170 | None:intergenic | 45.0% | |
| CCTATCCTAGATCTGCAGTT+AGG | + | chr4.1:431022-431041 | MS.gene94549:intron | 45.0% | |
| CGTGAAGCTCCAGTTTGATT+AGG | - | chr4.1:431447-431466 | None:intergenic | 45.0% | |
| CTACCATTACAGACGGTGAT+TGG | + | chr4.1:427804-427823 | MS.gene94549:CDS | 45.0% | |
| GAAAGGCAATACCAGTAAGG+GGG | + | chr4.1:428212-428231 | MS.gene94549:CDS | 45.0% | |
| GAAGGAGATAGAAGAGCCAA+CGG | + | chr4.1:432363-432382 | MS.gene94549:CDS | 45.0% | |
| GATGTCACATTCTAGCCCAT+CGG | + | chr4.1:433184-433203 | MS.gene94549:CDS | 45.0% | |
| GCATCTGTTCGTGCTCATTA+AGG | - | chr4.1:430561-430580 | None:intergenic | 45.0% | |
| GGAACTCAACGGCAAAATTG+TGG | + | chr4.1:433114-433133 | MS.gene94549:CDS | 45.0% | |
| GGCAAATCTCTACGCAATGT+GGG | - | chr4.1:431222-431241 | None:intergenic | 45.0% | |
| GGTAGGAGGGTTAGATGATT+TGG | - | chr4.1:427789-427808 | None:intergenic | 45.0% | |
| GGTTCAGATCGATCAACAAG+CGG | + | chr4.1:427559-427578 | MS.gene94549:intron | 45.0% | |
| GTGAACATGAGAGGGAAGAA+AGG | + | chr4.1:428428-428447 | MS.gene94549:CDS | 45.0% | |
| GTTGACTGCCAACATCTACA+GGG | - | chr4.1:428264-428283 | None:intergenic | 45.0% | |
| GTTGAGACCAAGGTAGATCA+TGG | + | chr4.1:428148-428167 | MS.gene94549:CDS | 45.0% | |
| TAAACCTGTGGTTGAGACCA+AGG | + | chr4.1:428138-428157 | MS.gene94549:CDS | 45.0% | |
| TAAGCAACACTTGGCGATGT+GGG | - | chr4.1:430928-430947 | None:intergenic | 45.0% | |
| TAATGAGCACGAACAGATGC+TGG | + | chr4.1:430561-430580 | MS.gene94549:intron | 45.0% | |
| TCCAAAACCTTGCCAAGTCA+AGG | - | chr4.1:430729-430748 | None:intergenic | 45.0% | |
| TCCTCTTCCAGCAGTAATTC+TGG | - | chr4.1:428190-428209 | None:intergenic | 45.0% | |
| TCTGATTCAGATACGGACTC+TGG | + | chr4.1:428385-428404 | MS.gene94549:CDS | 45.0% | |
| TGCCTGATGGAGAATGTTCT+CGG | - | chr4.1:427450-427469 | None:intergenic | 45.0% | |
| TGGCAAATCTCTACGCAATG+TGG | - | chr4.1:431223-431242 | None:intergenic | 45.0% | |
| TTAATACAGCTGCACGTCAC+AGG | + | chr4.1:432306-432325 | MS.gene94549:intron | 45.0% | |
| TTCGCCTTAATTGCGGCATT+TGG | + | chr4.1:430841-430860 | MS.gene94549:intron | 45.0% | |
| ! | AAGCGGTTAAGTCTAGAGTG+AGG | - | chr4.1:432012-432031 | None:intergenic | 45.0% |
| ! | CACGGTCTAGATCACTGTTT+TGG | + | chr4.1:428842-428861 | MS.gene94549:intron | 45.0% |
| ! | CCTAACTGCAGATCTAGGAT+AGG | - | chr4.1:431025-431044 | None:intergenic | 45.0% |
| ! | CTAGAGTGAGGTACCATGAT+AGG | - | chr4.1:432000-432019 | None:intergenic | 45.0% |
| ! | TCCCGAGCTGAGATTTTAAG+AGG | + | chr4.1:431537-431556 | MS.gene94549:intron | 45.0% |
| !! | AAGGTTGGTATAGGCCCATA+AGG | + | chr4.1:430238-430257 | MS.gene94549:intron | 45.0% |
| !! | AAGTCACTTGATGATGAGGC+AGG | - | chr4.1:432954-432973 | None:intergenic | 45.0% |
| !! | CGCCAAGTGTTGCTTATAAG+TGG | + | chr4.1:430932-430951 | MS.gene94549:intron | 45.0% |
| !!! | TCCTTGACTTGGCAAGGTTT+TGG | + | chr4.1:430725-430744 | MS.gene94549:intron | 45.0% |
| !!! | TTTTTTTTTTTTGATTTTAA+CGG | + | chr4.1:427538-427557 | MS.gene94549:intron | 5.0% |
| AACAGATTCCTGTCCTCTGG+TGG | - | chr4.1:428101-428120 | None:intergenic | 50.0% | |
| ACATTCTAGCCCATCGGATG+AGG | + | chr4.1:433190-433209 | MS.gene94549:CDS | 50.0% | |
| ACTCTGGCAAGAAACAGCTG+GGG | + | chr4.1:433036-433055 | MS.gene94549:CDS | 50.0% | |
| ACTGCTGGAAGAGGACAGAA+AGG | + | chr4.1:428195-428214 | MS.gene94549:CDS | 50.0% | |
| AGACTGCCTATCAGTGGAAG+CGG | - | chr4.1:428050-428069 | None:intergenic | 50.0% | |
| AGGGACACCACTACCTGATT+TGG | - | chr4.1:427654-427673 | None:intergenic | 50.0% | |
| ATAAGCCAGCCCAAGAGTTG+AGG | + | chr4.1:430650-430669 | MS.gene94549:intron | 50.0% | |
| ATGGAAAATGGACGGACGGA+CGG | - | chr4.1:427476-427495 | None:intergenic | 50.0% | |
| CACCGTCTGTAATGGTAGGA+GGG | - | chr4.1:427802-427821 | None:intergenic | 50.0% | |
| CACTCTGGCAAGAAACAGCT+GGG | + | chr4.1:433035-433054 | MS.gene94549:CDS | 50.0% | |
| CAGATCTACCCTCATCCGAT+GGG | - | chr4.1:433202-433221 | None:intergenic | 50.0% | |
| CATTCTAGCCCATCGGATGA+GGG | + | chr4.1:433191-433210 | MS.gene94549:CDS | 50.0% | |
| CCAGTTCAACCTCTTTGCAG+AGG | + | chr4.1:427954-427973 | MS.gene94549:CDS | 50.0% | |
| CCTCTGCAAAGAGGTTGAAC+TGG | - | chr4.1:427957-427976 | None:intergenic | 50.0% | |
| CTAGGGGCTAACCGCAATTA+AGG | - | chr4.1:431117-431136 | None:intergenic | 50.0% | |
| CTCAGCAGGATGTTTAGCGT+AGG | + | chr4.1:428676-428695 | MS.gene94549:intron | 50.0% | |
| CTGATGGAGAATGTTCTCGG+CGG | - | chr4.1:427447-427466 | None:intergenic | 50.0% | |
| CTTCGTAAGACTGACCAGAC+TGG | - | chr4.1:432537-432556 | None:intergenic | 50.0% | |
| CTTCTTCCGCTTCCACTGAT+AGG | + | chr4.1:428041-428060 | MS.gene94549:CDS | 50.0% | |
| GACGAGAACATGTCAGTCTC+AGG | + | chr4.1:432912-432931 | MS.gene94549:CDS | 50.0% | |
| GATATCCTCAACTCTTGGGC+TGG | - | chr4.1:430658-430677 | None:intergenic | 50.0% | |
| GCCAACATCTACAGGGAACT+TGG | - | chr4.1:428257-428276 | None:intergenic | 50.0% | |
| GCCAAGTTCCCTGTAGATGT+TGG | + | chr4.1:428253-428272 | MS.gene94549:CDS | 50.0% | |
| GGAAGCCTAACTGCAGATCT+AGG | - | chr4.1:431030-431049 | None:intergenic | 50.0% | |
| GGGACACCACTACCTGATTT+GGG | - | chr4.1:427653-427672 | None:intergenic | 50.0% | |
| GGTTCTTCTATGGCCAGTGA+TGG | + | chr4.1:428358-428377 | MS.gene94549:CDS | 50.0% | |
| GTATCTGTCGCCTTACAAGC+CGG | + | chr4.1:430958-430977 | MS.gene94549:intron | 50.0% | |
| TAAAATACGAGGCGCAGGCA+CGG | - | chr4.1:427864-427883 | None:intergenic | 50.0% | |
| TAGAGCTCAGAAGGAGCTTG+AGG | + | chr4.1:431418-431437 | MS.gene94549:intron | 50.0% | |
| TCACCGTCTGTAATGGTAGG+AGG | - | chr4.1:427803-427822 | None:intergenic | 50.0% | |
| TCACTCTGGCAAGAAACAGC+TGG | + | chr4.1:433034-433053 | MS.gene94549:CDS | 50.0% | |
| TCAGATCGATCAACAAGCGG+CGG | + | chr4.1:427562-427581 | MS.gene94549:intron | 50.0% | |
| TCCAACACCTCCGTTATGCT+GGG | + | chr4.1:430882-430901 | MS.gene94549:intron | 50.0% | |
| TCGTCAACTCTGACACTCTC+TGG | + | chr4.1:429501-429520 | MS.gene94549:intron | 50.0% | |
| TCTACCTTGGTCTCAACCAC+AGG | - | chr4.1:428145-428164 | None:intergenic | 50.0% | |
| TGCCTTAAAATACGAGGCGC+AGG | - | chr4.1:427869-427888 | None:intergenic | 50.0% | |
| TGCTAAATCCACCAGAGGAC+AGG | + | chr4.1:428090-428109 | MS.gene94549:CDS | 50.0% | |
| TTCAGCACCTCCGTTGTGTT+GGG | + | chr4.1:431176-431195 | MS.gene94549:intron | 50.0% | |
| ! | GCAGCTTCAGAGCACTATGA+TGG | + | chr4.1:428933-428952 | MS.gene94549:CDS | 50.0% |
| ! | GGTGCTGAAGGCTACAATGA+CGG | - | chr4.1:431165-431184 | None:intergenic | 50.0% |
| ! | TGCCTGCGCCTCGTATTTTA+AGG | + | chr4.1:427864-427883 | MS.gene94549:CDS | 50.0% |
| !! | AACTCTTGGGCTGGCTTATG+GGG | - | chr4.1:430649-430668 | None:intergenic | 50.0% |
| !! | ACACCACTACCTGATTTGGG+AGG | - | chr4.1:427650-427669 | None:intergenic | 50.0% |
| !! | ATCTGGTGCCGTGATCTCAT+TGG | + | chr4.1:433217-433236 | MS.gene94549:CDS | 50.0% |
| !! | CAACTCTTGGGCTGGCTTAT+GGG | - | chr4.1:430650-430669 | None:intergenic | 50.0% |
| !! | GAGAGTGTCAGAGTTGACGA+TGG | - | chr4.1:429501-429520 | None:intergenic | 50.0% |
| !! | GGGAGGAGCATCAATACTAC+TGG | - | chr4.1:427633-427652 | None:intergenic | 50.0% |
| !! | GTTCTCGGCGGCTTTAAGTT+TGG | - | chr4.1:427435-427454 | None:intergenic | 50.0% |
| !! | TCAACTCTTGGGCTGGCTTA+TGG | - | chr4.1:430651-430670 | None:intergenic | 50.0% |
| ACATGCCGCAGTTAGGTGCT+AGG | - | chr4.1:431135-431154 | None:intergenic | 55.0% | |
| ATGCCGCAGTTAGGTGCTAG+GGG | - | chr4.1:431133-431152 | None:intergenic | 55.0% | |
| CACGTCACAGGCAAGGAAAC+TGG | + | chr4.1:432318-432337 | MS.gene94549:intron | 55.0% | |
| CATGCCGCAGTTAGGTGCTA+GGG | - | chr4.1:431134-431153 | None:intergenic | 55.0% | |
| CCAGATCTACCCTCATCCGA+TGG | - | chr4.1:433203-433222 | None:intergenic | 55.0% | |
| CCATCGGATGAGGGTAGATC+TGG | + | chr4.1:433200-433219 | MS.gene94549:CDS | 55.0% | |
| CCTGAGGGACAGGGAAAAAC+AGG | - | chr4.1:428909-428928 | None:intergenic | 55.0% | |
| CGCCGAGAACATTCTCCATC+AGG | + | chr4.1:427445-427464 | MS.gene94549:CDS | 55.0% | |
| CTCCAACACCTCCGTTATGC+TGG | + | chr4.1:430881-430900 | MS.gene94549:intron | 55.0% | |
| CTCCGTTATGCTGGGTGTGA+GGG | + | chr4.1:430890-430909 | MS.gene94549:intron | 55.0% | |
| CTCCGTTGTGTTGGGTGTGA+GGG | + | chr4.1:431184-431203 | MS.gene94549:intron | 55.0% | |
| CTTCAGCACCTCCGTTGTGT+TGG | + | chr4.1:431175-431194 | MS.gene94549:intron | 55.0% | |
| GATCCTAGCTGAGAGAGCAG+CGG | + | chr4.1:428468-428487 | MS.gene94549:CDS | 55.0% | |
| GCTCCTCCCAAATCAGGTAG+TGG | + | chr4.1:427644-427663 | MS.gene94549:CDS | 55.0% | |
| GGGGCTAACCGCAATTAAGG+CGG | - | chr4.1:431114-431133 | None:intergenic | 55.0% | |
| GGGGTGTGTTGAGATCCCAA+AGG | - | chr4.1:430540-430559 | None:intergenic | 55.0% | |
| GTAAGACTGACCAGACTGGC+TGG | - | chr4.1:432533-432552 | None:intergenic | 55.0% | |
| GTCCACACTTCAGGCCCATA+GGG | + | chr4.1:431056-431075 | MS.gene94549:intron | 55.0% | |
| GTTCCACTGTACAGCTGCGA+GGG | - | chr4.1:429208-429227 | None:intergenic | 55.0% | |
| TAGCCCCTAGCACCTAACTG+CGG | + | chr4.1:431127-431146 | MS.gene94549:intron | 55.0% | |
| TCCGTTATGCTGGGTGTGAG+GGG | + | chr4.1:430891-430910 | MS.gene94549:intron | 55.0% | |
| TCCGTTGTGTTGGGTGTGAG+GGG | + | chr4.1:431185-431204 | MS.gene94549:intron | 55.0% | |
| TGGGTGCCCATGATCTACCT+TGG | - | chr4.1:428158-428177 | None:intergenic | 55.0% | |
| TGTCCACACTTCAGGCCCAT+AGG | + | chr4.1:431055-431074 | MS.gene94549:intron | 55.0% | |
| ! | ACCCAGCATAACGGAGGTGT+TGG | - | chr4.1:430886-430905 | None:intergenic | 55.0% |
| ! | CAAGGGTGAGGCACCTATCA+TGG | + | chr4.1:431984-432003 | MS.gene94549:intron | 55.0% |
| ! | GGTGTTGGAGGCTGCAATGA+AGG | - | chr4.1:430871-430890 | None:intergenic | 55.0% |
| ! | TCTGAAGCTGCGAAGCCTGA+GGG | - | chr4.1:428924-428943 | None:intergenic | 55.0% |
| !! | CAACACAACGGAGGTGCTGA+AGG | - | chr4.1:431177-431196 | None:intergenic | 55.0% |
| !! | CAGCATAACGGAGGTGTTGG+AGG | - | chr4.1:430883-430902 | None:intergenic | 55.0% |
| !! | CCTGTTTTTCCCTGTCCCTC+AGG | + | chr4.1:428906-428925 | MS.gene94549:intron | 55.0% |
| ACAGCTGCACGTCACAGGCA+AGG | + | chr4.1:432311-432330 | MS.gene94549:intron | 60.0% | |
| CCAGCTCACATGCCGCAGTT+AGG | - | chr4.1:431142-431161 | None:intergenic | 60.0% | |
| CCCCCTCACACCCAACACAA+CGG | - | chr4.1:431189-431208 | None:intergenic | 60.0% | |
| CCCCCTCACACCCAGCATAA+CGG | - | chr4.1:430895-430914 | None:intergenic | 60.0% | |
| CCGTTATGCTGGGTGTGAGG+GGG | + | chr4.1:430892-430911 | MS.gene94549:intron | 60.0% | |
| CCGTTGTGTTGGGTGTGAGG+GGG | + | chr4.1:431186-431205 | MS.gene94549:intron | 60.0% | |
| CCTAACTGCGGCATGTGAGC+TGG | + | chr4.1:431139-431158 | MS.gene94549:intron | 60.0% | |
| CCTCACACCCAACACAACGG+AGG | - | chr4.1:431186-431205 | None:intergenic | 60.0% | |
| CCTCACACCCAGCATAACGG+AGG | - | chr4.1:430892-430911 | None:intergenic | 60.0% | |
| CCTCCGTTATGCTGGGTGTG+AGG | + | chr4.1:430889-430908 | MS.gene94549:intron | 60.0% | |
| CCTCCGTTGTGTTGGGTGTG+AGG | + | chr4.1:431183-431202 | MS.gene94549:intron | 60.0% | |
| GACCCTATGGGCCTGAAGTG+TGG | - | chr4.1:431061-431080 | None:intergenic | 60.0% | |
| GATCCCTCGCAGCTGTACAG+TGG | + | chr4.1:429202-429221 | MS.gene94549:CDS | 60.0% | |
| GCCTGAAGTGTGGACAACGC+GGG | - | chr4.1:431051-431070 | None:intergenic | 60.0% | |
| GGCACGGCGTTAGAAGCAGA+AGG | - | chr4.1:427848-427867 | None:intergenic | 60.0% | |
| GGCCTGAAGTGTGGACAACG+CGG | - | chr4.1:431052-431071 | None:intergenic | 60.0% | |
| GGTTCCACTGTACAGCTGCG+AGG | - | chr4.1:429209-429228 | None:intergenic | 60.0% | |
| TCAGGCTTGACCAGCCAGTC+TGG | + | chr4.1:432520-432539 | MS.gene94549:intron | 60.0% | |
| TCCCGCGTTGTCCACACTTC+AGG | + | chr4.1:431047-431066 | MS.gene94549:intron | 60.0% | |
| TGACTCAGCAGGCAGTGTCG+AGG | + | chr4.1:432883-432902 | MS.gene94549:intron | 60.0% | |
| TGTGTTGGGTGTGAGGGGGT+GGG | + | chr4.1:431190-431209 | MS.gene94549:intron | 60.0% | |
| TTGCCGCTGCTCTCTCAGCT+AGG | - | chr4.1:428474-428493 | None:intergenic | 60.0% | |
| TTGTGTTGGGTGTGAGGGGG+TGG | + | chr4.1:431189-431208 | MS.gene94549:intron | 60.0% | |
| !! | CTCTGAAGCTGCGAAGCCTG+AGG | - | chr4.1:428925-428944 | None:intergenic | 60.0% |
| AGCTGCGAAGCCTGAGGGAC+AGG | - | chr4.1:428919-428938 | None:intergenic | 65.0% | |
| GCTGCGAAGCCTGAGGGACA+GGG | - | chr4.1:428918-428937 | None:intergenic | 65.0% | |
| ! | GCAGGCAGTGTCGAGGTTGC+TGG | + | chr4.1:432890-432909 | MS.gene94549:intron | 65.0% |
| ! | GGACGGACGGACTTGCCTGA+TGG | - | chr4.1:427463-427482 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 427413 | 433265 | 427413 | ID=MS.gene94549 |
| chr4.1 | mRNA | 427413 | 433265 | 427413 | ID=MS.gene94549.t1;Parent=MS.gene94549 |
| chr4.1 | exon | 427413 | 427478 | 427413 | ID=MS.gene94549.t1.exon1;Parent=MS.gene94549.t1 |
| chr4.1 | CDS | 427413 | 427478 | 427413 | ID=cds.MS.gene94549.t1;Parent=MS.gene94549.t1 |
| chr4.1 | exon | 427566 | 428603 | 427566 | ID=MS.gene94549.t1.exon2;Parent=MS.gene94549.t1 |
| chr4.1 | CDS | 427566 | 428603 | 427566 | ID=cds.MS.gene94549.t1;Parent=MS.gene94549.t1 |
| chr4.1 | exon | 428928 | 429038 | 428928 | ID=MS.gene94549.t1.exon3;Parent=MS.gene94549.t1 |
| chr4.1 | CDS | 428928 | 429038 | 428928 | ID=cds.MS.gene94549.t1;Parent=MS.gene94549.t1 |
| chr4.1 | exon | 429180 | 429239 | 429180 | ID=MS.gene94549.t1.exon4;Parent=MS.gene94549.t1 |
| chr4.1 | CDS | 429180 | 429239 | 429180 | ID=cds.MS.gene94549.t1;Parent=MS.gene94549.t1 |
| chr4.1 | exon | 429742 | 429799 | 429742 | ID=MS.gene94549.t1.exon5;Parent=MS.gene94549.t1 |
| chr4.1 | CDS | 429742 | 429799 | 429742 | ID=cds.MS.gene94549.t1;Parent=MS.gene94549.t1 |
| chr4.1 | exon | 431421 | 431473 | 431421 | ID=MS.gene94549.t1.exon6;Parent=MS.gene94549.t1 |
| chr4.1 | CDS | 431421 | 431473 | 431421 | ID=cds.MS.gene94549.t1;Parent=MS.gene94549.t1 |
| chr4.1 | exon | 431700 | 431789 | 431700 | ID=MS.gene94549.t1.exon7;Parent=MS.gene94549.t1 |
| chr4.1 | CDS | 431700 | 431789 | 431700 | ID=cds.MS.gene94549.t1;Parent=MS.gene94549.t1 |
| chr4.1 | exon | 432328 | 432453 | 432328 | ID=MS.gene94549.t1.exon8;Parent=MS.gene94549.t1 |
| chr4.1 | CDS | 432328 | 432453 | 432328 | ID=cds.MS.gene94549.t1;Parent=MS.gene94549.t1 |
| chr4.1 | exon | 432755 | 432802 | 432755 | ID=MS.gene94549.t1.exon9;Parent=MS.gene94549.t1 |
| chr4.1 | CDS | 432755 | 432802 | 432755 | ID=cds.MS.gene94549.t1;Parent=MS.gene94549.t1 |
| chr4.1 | exon | 432894 | 433265 | 432894 | ID=MS.gene94549.t1.exon10;Parent=MS.gene94549.t1 |
| chr4.1 | CDS | 432894 | 433265 | 432894 | ID=cds.MS.gene94549.t1;Parent=MS.gene94549.t1 |
| Gene Sequence |
| Protein sequence |
