Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054479 | MS.gene060191 | 0.814336 | 1.62E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene060191 | 0.808758 | 2.65E-50 | -1.69E-46 |
| MS.gene055864 | MS.gene060191 | 0.835962 | 1.24E-56 | -1.69E-46 |
| MS.gene058081 | MS.gene060191 | 0.802683 | 4.99E-49 | -1.69E-46 |
| MS.gene059952 | MS.gene060191 | 0.807708 | 4.43E-50 | -1.69E-46 |
| MS.gene060190 | MS.gene060191 | 0.815868 | 7.41E-52 | -1.69E-46 |
| MS.gene060191 | MS.gene062156 | 0.807389 | 5.18E-50 | -1.69E-46 |
| MS.gene060191 | MS.gene062292 | 0.802353 | 5.84E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene06324 | 0.809933 | 1.48E-50 | -1.69E-46 |
| MS.gene060191 | MS.gene065504 | 0.815426 | 9.30E-52 | -1.69E-46 |
| MS.gene060191 | MS.gene066405 | 0.814344 | 1.62E-51 | -1.69E-46 |
| MS.gene060191 | MS.gene06881 | 0.802407 | 5.69E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene069808 | 0.812663 | 3.79E-51 | -1.69E-46 |
| MS.gene060191 | MS.gene07510 | 0.819166 | 1.34E-52 | -1.69E-46 |
| MS.gene060191 | MS.gene07608 | 0.802313 | 5.95E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene21562 | 0.805463 | 1.32E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene23078 | 0.814497 | 1.49E-51 | -1.69E-46 |
| MS.gene060191 | MS.gene23963 | 0.812019 | 5.23E-51 | -1.69E-46 |
| MS.gene060191 | MS.gene24413 | 0.810541 | 1.10E-50 | -1.69E-46 |
| MS.gene060191 | MS.gene25469 | 0.833103 | 6.46E-56 | -1.69E-46 |
| MS.gene060191 | MS.gene25471 | 0.833744 | 4.47E-56 | -1.69E-46 |
| MS.gene060191 | MS.gene25599 | 0.808068 | 3.71E-50 | -1.69E-46 |
| MS.gene060191 | MS.gene27288 | 0.80433 | 2.28E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene28544 | 0.824822 | 6.55E-54 | -1.69E-46 |
| MS.gene060191 | MS.gene29041 | 0.801266 | 9.77E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene29427 | 0.800318 | 1.52E-48 | -1.69E-46 |
| MS.gene060191 | MS.gene30397 | 0.801814 | 7.54E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene33466 | 0.802032 | 6.80E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene34691 | 0.80851 | 2.99E-50 | -1.69E-46 |
| MS.gene060191 | MS.gene35034 | 0.805359 | 1.39E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene36037 | 0.820493 | 6.66E-53 | -1.69E-46 |
| MS.gene060191 | MS.gene36154 | 0.809402 | 1.93E-50 | -1.69E-46 |
| MS.gene060191 | MS.gene40518 | 0.81621 | 6.22E-52 | -1.69E-46 |
| MS.gene060191 | MS.gene40918 | 0.800037 | 1.74E-48 | -1.69E-46 |
| MS.gene060191 | MS.gene49772 | 0.80505 | 1.61E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene50031 | 0.806027 | 1.00E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene50745 | 0.818068 | 2.38E-52 | -1.69E-46 |
| MS.gene060191 | MS.gene52583 | 0.826881 | 2.13E-54 | -1.69E-46 |
| MS.gene060191 | MS.gene54280 | 0.803778 | 2.96E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene54904 | 0.853125 | 2.94E-61 | -1.69E-46 |
| MS.gene060191 | MS.gene61428 | 0.802549 | 5.32E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene65300 | 0.80844 | 3.09E-50 | -1.69E-46 |
| MS.gene060191 | MS.gene66049 | 0.821118 | 4.78E-53 | -1.69E-46 |
| MS.gene060191 | MS.gene67553 | 0.809081 | 2.26E-50 | -1.69E-46 |
| MS.gene060191 | MS.gene68264 | 0.825951 | 3.54E-54 | -1.69E-46 |
| MS.gene060191 | MS.gene68360 | 0.803133 | 4.03E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene70112 | 0.812678 | 3.76E-51 | -1.69E-46 |
| MS.gene060191 | MS.gene70282 | 0.824995 | 5.97E-54 | -1.69E-46 |
| MS.gene060191 | MS.gene74900 | 0.80918 | 2.15E-50 | -1.69E-46 |
| MS.gene060191 | MS.gene75038 | 0.831147 | 1.97E-55 | -1.69E-46 |
| MS.gene060191 | MS.gene77208 | 0.824442 | 8.05E-54 | -1.69E-46 |
| MS.gene060191 | MS.gene78230 | 0.815947 | 7.12E-52 | -1.69E-46 |
| MS.gene060191 | MS.gene86826 | 0.821046 | 4.97E-53 | -1.69E-46 |
| MS.gene060191 | MS.gene91204 | 0.805476 | 1.31E-49 | -1.69E-46 |
| MS.gene060191 | MS.gene94549 | 0.806098 | 9.70E-50 | -1.69E-46 |
| MS.gene060191 | MS.gene97030 | 0.804892 | 1.74E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060191.t1 | MTR_0130s0060 | 96.774 | 31 | 1 | 0 | 134 | 164 | 198 | 228 | 2.42e-12 | 63.2 |
| MS.gene060191.t1 | MTR_7g102700 | 81.818 | 33 | 6 | 0 | 133 | 165 | 79 | 111 | 6.48e-11 | 60.1 |
| MS.gene060191.t1 | MTR_7g102700 | 81.818 | 33 | 6 | 0 | 133 | 165 | 79 | 111 | 6.48e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 40 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGAAATCTTCTTCAATT+TGG | 0.134138 | 2.3:-20677360 | MS.gene060191:intron |
| GTTGCTGGATAATCTTATTT+AGG | 0.225537 | 2.3:-20674568 | None:intergenic |
| GACTTGAGCAAGTTGAATTC+TGG | 0.323031 | 2.3:-20676642 | MS.gene060191:intron |
| AATTAAATTGTCTCCATTGC+AGG | 0.323826 | 2.3:+20676137 | None:intergenic |
| AACTTACTTCTCATTGAGAT+TGG | 0.354150 | 2.3:+20674831 | None:intergenic |
| TCCTCCCTACTGCAGGTTGC+TGG | 0.377779 | 2.3:-20674583 | MS.gene060191:intron |
| AGAGCGGCGGAAACGATTTC+CGG | 0.402376 | 2.3:+20677815 | None:intergenic |
| TTCTTCAATTTGGATATTCA+AGG | 0.402558 | 2.3:-20677350 | MS.gene060191:intron |
| GGAATTCGCTTCCGCTACTC+TGG | 0.407132 | 2.3:-20676932 | MS.gene060191:CDS |
| TCAGACAAAGGTCTTTGTGC+TGG | 0.429865 | 2.3:-20676696 | MS.gene060191:CDS |
| GGAAATCGTTTCCGCCGCTC+TGG | 0.446537 | 2.3:-20677813 | MS.gene060191:CDS |
| TCTAATGACTCGAATCCGTT+TGG | 0.458922 | 2.3:-20674859 | MS.gene060191:CDS |
| TTGAAGGATCAAACCGTGTC+CGG | 0.463700 | 2.3:-20674886 | MS.gene060191:CDS |
| AGAGTAGCGGAAGCGAATTC+CGG | 0.469525 | 2.3:+20676934 | None:intergenic |
| GAAAGTTGCTAAGAAATTGA+AGG | 0.471052 | 2.3:-20674902 | MS.gene060191:CDS |
| ATTCGAGTCATTAGAATATC+CGG | 0.497035 | 2.3:+20674867 | None:intergenic |
| TTCTCCGCCGACCGACGCAC+CGG | 0.506094 | 2.3:-20676953 | MS.gene060191:CDS |
| ATTAAATTGTCTCCATTGCA+GGG | 0.509397 | 2.3:+20676138 | None:intergenic |
| CCACGGCTGTCAAGATAAGC+AGG | 0.514825 | 2.3:-20676665 | MS.gene060191:CDS |
| GCGAATTCCGGTGCGTCGGT+CGG | 0.519409 | 2.3:+20676946 | None:intergenic |
| AGACAATTTAATTTCATACA+TGG | 0.522310 | 2.3:-20676127 | MS.gene060191:intron |
| TTCAACGGCGACCGACGCAC+CGG | 0.524584 | 2.3:-20677834 | MS.gene060191:CDS |
| AATTCCGGTGCGTCGGTCGG+CGG | 0.550616 | 2.3:+20676949 | None:intergenic |
| ATTACAGTTTCTTCAGACAA+AGG | 0.563226 | 2.3:-20676708 | MS.gene060191:CDS |
| CTCTGGATTTAGAATCAGAA+GGG | 0.572613 | 2.3:-20676915 | MS.gene060191:intron |
| TTGAGATTGGAATCACCAAA+CGG | 0.579236 | 2.3:+20674844 | None:intergenic |
| TTCAATTCAAATCCCTGCAA+TGG | 0.587104 | 2.3:-20676150 | MS.gene060191:CDS |
| CCTGCTTATCTTGACAGCCG+TGG | 0.594322 | 2.3:+20676665 | None:intergenic |
| GGAAACGATTTCCGGTGCGT+CGG | 0.610435 | 2.3:+20677823 | None:intergenic |
| TTGGATCGGAGCAACTTCAA+CGG | 0.617998 | 2.3:-20677849 | MS.gene060191:CDS |
| ACTCTGGATTTAGAATCAGA+AGG | 0.619699 | 2.3:-20676916 | MS.gene060191:CDS |
| TTGTGCTGGAATCAACTCCA+CGG | 0.642170 | 2.3:-20676682 | MS.gene060191:CDS |
| GGAAGCGAATTCCGGTGCGT+CGG | 0.645681 | 2.3:+20676942 | None:intergenic |
| GTCATTAGAATATCCGGACA+CGG | 0.645926 | 2.3:+20674873 | None:intergenic |
| TGATTCTAAATCCAGAGTAG+CGG | 0.653355 | 2.3:+20676921 | None:intergenic |
| TGATTCTAAATCCAGAGCGG+CGG | 0.666748 | 2.3:+20677802 | None:intergenic |
| CACGGCTGTCAAGATAAGCA+GGG | 0.686355 | 2.3:-20676664 | MS.gene060191:CDS |
| AATGAAATGAATGAATACCA+AGG | 0.694706 | 2.3:-20677994 | None:intergenic |
| GCTCTGGATTTAGAATCAGA+AGG | 0.704129 | 2.3:-20677797 | MS.gene060191:intron |
| TTCTGATTCTAAATCCAGAG+CGG | 0.710095 | 2.3:+20677799 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTATTTTAATTAA+GGG | - | chr2.3:20674893-20674912 | MS.gene060191:CDS | 0.0% |
| !! | AACTAAAAATTAATAAAGTT+GGG | + | chr2.3:20677057-20677076 | None:intergenic | 10.0% |
| !! | TAACTAAAAATTAATAAAGT+TGG | + | chr2.3:20677058-20677077 | None:intergenic | 10.0% |
| !! | TAATAACTTTATTACAAAAA+GGG | - | chr2.3:20676966-20676985 | MS.gene060191:CDS | 10.0% |
| !! | TTAATAACTTTATTACAAAA+AGG | - | chr2.3:20676965-20676984 | MS.gene060191:CDS | 10.0% |
| !!! | CAATATTCTAAAATAAAAAT+CGG | + | chr2.3:20675270-20675289 | None:intergenic | 10.0% |
| !!! | TTTTTTAAATTTTCTTCTAT+AGG | + | chr2.3:20677298-20677317 | None:intergenic | 10.0% |
| !! | AATAAAAAATAGAACAACTA+TGG | + | chr2.3:20675246-20675265 | None:intergenic | 15.0% |
| !! | ATGTTTATTTATAGTGATTA+TGG | - | chr2.3:20675808-20675827 | MS.gene060191:intron | 15.0% |
| !! | GAAAAAACTAAGTTAATTAT+TGG | - | chr2.3:20677944-20677963 | MS.gene060191:intron | 15.0% |
| !! | TATATGTTCAAATGTAAATA+TGG | - | chr2.3:20677914-20677933 | MS.gene060191:intron | 15.0% |
| !! | TATTAACATACTAAATAGTA+TGG | + | chr2.3:20676951-20676970 | None:intergenic | 15.0% |
| !! | TTCAATAAAATGAACAAAAA+AGG | + | chr2.3:20675129-20675148 | None:intergenic | 15.0% |
| !!! | AAATAAACATATCTTTTCAT+AGG | + | chr2.3:20675798-20675817 | None:intergenic | 15.0% |
| !!! | AAATTGTGATTTTTAATTCA+AGG | - | chr2.3:20674802-20674821 | MS.gene060191:intron | 15.0% |
| !!! | AAGAAAATTCTGTTTTATAT+AGG | - | chr2.3:20676882-20676901 | MS.gene060191:intron | 15.0% |
| !!! | AGAAAATTCTGTTTTATATA+GGG | - | chr2.3:20676883-20676902 | MS.gene060191:intron | 15.0% |
| !!! | ATGAATTTAATTGGTTTAAA+GGG | - | chr2.3:20677588-20677607 | MS.gene060191:intron | 15.0% |
| !!! | TATTCTTACAGAATTTTTTT+GGG | - | chr2.3:20674833-20674852 | MS.gene060191:intron | 15.0% |
| !!! | TTATTCTTACAGAATTTTTT+TGG | - | chr2.3:20674832-20674851 | MS.gene060191:intron | 15.0% |
| !! | AATAATAATCTTCTATCCTA+GGG | - | chr2.3:20676663-20676682 | MS.gene060191:CDS | 20.0% |
| !! | GAATTAAAAATCACAATTTG+CGG | + | chr2.3:20674801-20674820 | None:intergenic | 20.0% |
| !! | GATTTGTCTGTTAAAAAAAT+TGG | + | chr2.3:20677131-20677150 | None:intergenic | 20.0% |
| !! | TAAATTCATGAAAACACAAT+CGG | + | chr2.3:20677577-20677596 | None:intergenic | 20.0% |
| !! | TAATAATAATCTTCTATCCT+AGG | - | chr2.3:20676662-20676681 | MS.gene060191:CDS | 20.0% |
| !! | TCCTATATCAAAAAAGATTA+GGG | + | chr2.3:20677762-20677781 | None:intergenic | 20.0% |
| !! | TGTATATCATAAGTGAAAAT+TGG | - | chr2.3:20674958-20674977 | MS.gene060191:intron | 20.0% |
| !! | TTAGTTGCAAATAAAGAAAA+GGG | - | chr2.3:20677528-20677547 | MS.gene060191:intron | 20.0% |
| !! | TTCCTATATCAAAAAAGATT+AGG | + | chr2.3:20677763-20677782 | None:intergenic | 20.0% |
| !! | TTTAGTTGCAAATAAAGAAA+AGG | - | chr2.3:20677527-20677546 | MS.gene060191:intron | 20.0% |
| !!! | AGACAATTTAATTTCATACA+TGG | - | chr2.3:20676430-20676449 | MS.gene060191:intron | 20.0% |
| !!! | CAAAGGTTATAAATTTTTTC+GGG | + | chr2.3:20676070-20676089 | None:intergenic | 20.0% |
| !!! | CATGAATTTAATTGGTTTAA+AGG | - | chr2.3:20677587-20677606 | MS.gene060191:intron | 20.0% |
| !!! | GAAAATTCTGTTTTATATAG+GGG | - | chr2.3:20676884-20676903 | MS.gene060191:intron | 20.0% |
| !!! | GATTTTATTTGAGATGATTT+AGG | - | chr2.3:20676707-20676726 | MS.gene060191:CDS | 20.0% |
| !!! | GCAAAGGTTATAAATTTTTT+CGG | + | chr2.3:20676071-20676090 | None:intergenic | 20.0% |
| !!! | TAATGTTTTTCTACAATGAA+GGG | + | chr2.3:20677436-20677455 | None:intergenic | 20.0% |
| !!! | TACAGATTTTTTGTTTTGTT+TGG | - | chr2.3:20675066-20675085 | MS.gene060191:intron | 20.0% |
| !!! | TGTGTTTTCATGAATTTAAT+TGG | - | chr2.3:20677579-20677598 | MS.gene060191:intron | 20.0% |
| !!! | TGTTTTTTACAAATGTGTAT+TGG | - | chr2.3:20677803-20677822 | MS.gene060191:CDS | 20.0% |
| !!! | TTAATGTTTTTCTACAATGA+AGG | + | chr2.3:20677437-20677456 | None:intergenic | 20.0% |
| !!! | TTTTAATTTGGTTTGTTGTT+TGG | - | chr2.3:20675518-20675537 | MS.gene060191:intron | 20.0% |
| ! | AAAAAAAACTGATGCAATTG+TGG | + | chr2.3:20676002-20676021 | None:intergenic | 25.0% |
| ! | AAGTTACAAGCAAAATATCA+AGG | - | chr2.3:20677022-20677041 | MS.gene060191:intron | 25.0% |
| ! | ATTTGAGAGAGAAGAAATAT+TGG | - | chr2.3:20675001-20675020 | MS.gene060191:intron | 25.0% |
| ! | ATTTGGCTAAATTGTCTATA+AGG | - | chr2.3:20676110-20676129 | MS.gene060191:intron | 25.0% |
| ! | CGATATCTGTACTTATTATT+CGG | + | chr2.3:20676997-20677016 | None:intergenic | 25.0% |
| ! | GAACAAAAAAGGATTTCTTT+AGG | + | chr2.3:20675118-20675137 | None:intergenic | 25.0% |
| ! | GTTTAATCAAGAATCATGAT+CGG | - | chr2.3:20674603-20674622 | MS.gene060191:intron | 25.0% |
| ! | TCTTGATTAAACAAAAGATG+AGG | + | chr2.3:20674595-20674614 | None:intergenic | 25.0% |
| ! | TTAGAACATCTAACTATCTA+AGG | + | chr2.3:20676534-20676553 | None:intergenic | 25.0% |
| ! | TTCTTCAATTTGGATATTCA+AGG | - | chr2.3:20675207-20675226 | MS.gene060191:intron | 25.0% |
| ! | TTTGAGAGAGAAGAAATATT+GGG | - | chr2.3:20675002-20675021 | MS.gene060191:intron | 25.0% |
| !! | AATTTTCTTCTATAGGACTT+AGG | + | chr2.3:20677291-20677310 | None:intergenic | 25.0% |
| !! | GCACAAATTTTATTCTTGAT+CGG | - | chr2.3:20675576-20675595 | MS.gene060191:intron | 25.0% |
| !! | TGACATGTATTGAGAATTTT+TGG | - | chr2.3:20675693-20675712 | MS.gene060191:intron | 25.0% |
| !! | TGTGAAATACTGTTTTCATT+TGG | - | chr2.3:20676093-20676112 | MS.gene060191:intron | 25.0% |
| !! | TTCTGGAAAAACAAAAAACT+TGG | + | chr2.3:20674683-20674702 | None:intergenic | 25.0% |
| !!! | ATGTTGCTTTTTTTTTTGGT+AGG | + | chr2.3:20676776-20676795 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTTTTGTTTGGTC+TGG | - | chr2.3:20675071-20675090 | MS.gene060191:intron | 25.0% |
| !!! | CAAATTTTTTCAGTTGTTTG+TGG | + | chr2.3:20674986-20675005 | None:intergenic | 25.0% |
| !!! | GAAGAAACTTTATTTCTGTT+AGG | - | chr2.3:20677861-20677880 | MS.gene060191:intron | 25.0% |
| !!! | GTCAATGTTGCTTTTTTTTT+TGG | + | chr2.3:20676780-20676799 | None:intergenic | 25.0% |
| !!! | TACAGAATTTTTTTGGGTTA+GGG | - | chr2.3:20674839-20674858 | MS.gene060191:CDS | 25.0% |
| !!! | TCCCTAATCTTTTTTGATAT+AGG | - | chr2.3:20677758-20677777 | MS.gene060191:intron | 25.0% |
| !!! | TCTGGGTTTTGATTTTAATT+TGG | - | chr2.3:20675506-20675525 | MS.gene060191:intron | 25.0% |
| !!! | TGTTTGTTGTTGTTACAATT+TGG | - | chr2.3:20675171-20675190 | MS.gene060191:intron | 25.0% |
| !!! | TTACAGAATTTTTTTGGGTT+AGG | - | chr2.3:20674838-20674857 | MS.gene060191:CDS | 25.0% |
| !!! | TTGTTTTTCCAGAATTTTCT+TGG | - | chr2.3:20674689-20674708 | MS.gene060191:intron | 25.0% |
| !!! | TTTTAGTTAGTCTTTTGCTA+TGG | - | chr2.3:20677069-20677088 | MS.gene060191:intron | 25.0% |
| !!! | TTTTAGTTTGTTGTTTGGTT+TGG | - | chr2.3:20675544-20675563 | MS.gene060191:intron | 25.0% |
| !!! | TTTTTTGTTTTGTTTGGTCT+GGG | - | chr2.3:20675072-20675091 | MS.gene060191:intron | 25.0% |
| AAAAGATGAGGAAATTACCT+TGG | + | chr2.3:20674583-20674602 | None:intergenic | 30.0% | |
| AAAATCAAAACCCAGAACAA+AGG | + | chr2.3:20675502-20675521 | None:intergenic | 30.0% | |
| AACTTACTTCTCATTGAGAT+TGG | + | chr2.3:20677729-20677748 | None:intergenic | 30.0% | |
| AATTAAATTGTCTCCATTGC+AGG | + | chr2.3:20676423-20676442 | None:intergenic | 30.0% | |
| ACAGTCTATTAGCAAAGAAA+GGG | + | chr2.3:20676333-20676352 | None:intergenic | 30.0% | |
| ACTGTCTAATGTGATTGATT+GGG | - | chr2.3:20676348-20676367 | MS.gene060191:intron | 30.0% | |
| ATTAAATAACCAAGAGCAAG+AGG | + | chr2.3:20677264-20677283 | None:intergenic | 30.0% | |
| ATTAAATTGTCTCCATTGCA+GGG | + | chr2.3:20676422-20676441 | None:intergenic | 30.0% | |
| ATTACAGTTTCTTCAGACAA+AGG | - | chr2.3:20675849-20675868 | MS.gene060191:intron | 30.0% | |
| ATTCGAGTCATTAGAATATC+CGG | + | chr2.3:20677693-20677712 | None:intergenic | 30.0% | |
| CAAGGAAATCTTCTTCAATT+TGG | - | chr2.3:20675197-20675216 | MS.gene060191:intron | 30.0% | |
| CAGGTTGTAGAAAATAAACA+TGG | + | chr2.3:20676493-20676512 | None:intergenic | 30.0% | |
| GAAAGTTGCTAAGAAATTGA+AGG | - | chr2.3:20677655-20677674 | MS.gene060191:intron | 30.0% | |
| GTTGTTACAATTTGGAAACA+AGG | - | chr2.3:20675179-20675198 | MS.gene060191:intron | 30.0% | |
| TAACTTATGTTCGAATTGTC+AGG | + | chr2.3:20676274-20676293 | None:intergenic | 30.0% | |
| TAGAAAATAAACATGGTGCA+GGG | + | chr2.3:20676486-20676505 | None:intergenic | 30.0% | |
| TCACCAGAAAACATTAAAAG+CGG | + | chr2.3:20677406-20677425 | None:intergenic | 30.0% | |
| TCTTTGTGTGTATACTATGA+TGG | - | chr2.3:20675948-20675967 | MS.gene060191:intron | 30.0% | |
| ! | AAATGACCTAATGGATGAAT+GGG | - | chr2.3:20677218-20677237 | MS.gene060191:intron | 30.0% |
| ! | AGTTGGTCTAATTATGGAAA+TGG | - | chr2.3:20675304-20675323 | MS.gene060191:intron | 30.0% |
| ! | ATGTAATTTTCCCTGCATTA+TGG | - | chr2.3:20677361-20677380 | MS.gene060191:intron | 30.0% |
| ! | CTTTTTCCTTAATGTATCTC+CGG | - | chr2.3:20675468-20675487 | MS.gene060191:intron | 30.0% |
| ! | GAAAGTAATGCTTCTCTTTT+TGG | - | chr2.3:20676294-20676313 | MS.gene060191:intron | 30.0% |
| ! | GATTGAAGTTGGTCTAATTA+TGG | - | chr2.3:20675298-20675317 | MS.gene060191:intron | 30.0% |
| ! | TAAATGACCTAATGGATGAA+TGG | - | chr2.3:20677217-20677236 | MS.gene060191:intron | 30.0% |
| ! | TGTAATTTTCCCTGCATTAT+GGG | - | chr2.3:20677362-20677381 | MS.gene060191:intron | 30.0% |
| ! | TTTCCAGAATTTTCTTGGAT+CGG | - | chr2.3:20674694-20674713 | MS.gene060191:intron | 30.0% |
| !! | ATTTATAGTTTGCTGAGTGA+CGG | - | chr2.3:20677492-20677511 | MS.gene060191:intron | 30.0% |
| !! | TTGAGTTTGTTGATTGAAGT+TGG | - | chr2.3:20675287-20675306 | MS.gene060191:intron | 30.0% |
| !!! | AAATATTTTGATGCGCATAG+TGG | - | chr2.3:20676164-20676183 | MS.gene060191:CDS | 30.0% |
| !!! | AGGGTTTGATCTTTTGATTT+TGG | - | chr2.3:20674912-20674931 | MS.gene060191:intron | 30.0% |
| !!! | GGGTTTGATCTTTTGATTTT+GGG | - | chr2.3:20674913-20674932 | MS.gene060191:intron | 30.0% |
| !!! | GGTGATTTTAGTTTGTTGTT+TGG | - | chr2.3:20675539-20675558 | MS.gene060191:intron | 30.0% |
| !!! | TCCTTGTTTTAGTGATCTAA+GGG | + | chr2.3:20676733-20676752 | None:intergenic | 30.0% |
| !!! | TTCCTTGTTTTAGTGATCTA+AGG | + | chr2.3:20676734-20676753 | None:intergenic | 30.0% |
| AAAAAGATTAGGGAGAAGAG+AGG | + | chr2.3:20677752-20677771 | None:intergenic | 35.0% | |
| AACAGTATTTCACATCGCAA+AGG | + | chr2.3:20676087-20676106 | None:intergenic | 35.0% | |
| AACATACCGGAGATACATTA+AGG | + | chr2.3:20675477-20675496 | None:intergenic | 35.0% | |
| AAGCATCATATGCGGATAAT+AGG | - | chr2.3:20676589-20676608 | MS.gene060191:intron | 35.0% | |
| ACCAGAAAACATTAAAAGCG+GGG | + | chr2.3:20677404-20677423 | None:intergenic | 35.0% | |
| ATATCTCCCATTCATCCATT+AGG | + | chr2.3:20677227-20677246 | None:intergenic | 35.0% | |
| ATGTGATTGATTGGGATTTC+TGG | - | chr2.3:20676356-20676375 | MS.gene060191:intron | 35.0% | |
| CACCAGAAAACATTAAAAGC+GGG | + | chr2.3:20677405-20677424 | None:intergenic | 35.0% | |
| CGTAAAACAATAATCACCCT+AGG | + | chr2.3:20676682-20676701 | None:intergenic | 35.0% | |
| GACAGTCTATTAGCAAAGAA+AGG | + | chr2.3:20676334-20676353 | None:intergenic | 35.0% | |
| GACTGTCTAATGTGATTGAT+TGG | - | chr2.3:20676347-20676366 | MS.gene060191:intron | 35.0% | |
| GTAGAAAATAAACATGGTGC+AGG | + | chr2.3:20676487-20676506 | None:intergenic | 35.0% | |
| TGATTCTAAATCCAGAGTAG+CGG | + | chr2.3:20675639-20675658 | None:intergenic | 35.0% | |
| TTCAATTCAAATCCCTGCAA+TGG | - | chr2.3:20676407-20676426 | MS.gene060191:intron | 35.0% | |
| TTCTGATTCTAAATCCAGAG+CGG | + | chr2.3:20674761-20674780 | None:intergenic | 35.0% | |
| TTGAAACTGCAGACAATTGT+GGG | + | chr2.3:20676026-20676045 | None:intergenic | 35.0% | |
| TTGAGATTGGAATCACCAAA+CGG | + | chr2.3:20677716-20677735 | None:intergenic | 35.0% | |
| ! | ACTCTGGATTTAGAATCAGA+AGG | - | chr2.3:20675641-20675660 | MS.gene060191:intron | 35.0% |
| ! | AGTAATGCTTCTCTTTTTGG+TGG | - | chr2.3:20676297-20676316 | MS.gene060191:intron | 35.0% |
| ! | ATGAAAACACAATCGGTTTC+AGG | + | chr2.3:20677570-20677589 | None:intergenic | 35.0% |
| ! | CTCTGGATTTAGAATCAGAA+GGG | - | chr2.3:20674761-20674780 | MS.gene060191:intron | 35.0% |
| ! | GAGAAGTAAAGCATCATATG+CGG | - | chr2.3:20676581-20676600 | MS.gene060191:intron | 35.0% |
| !! | CTTGGTGTTGAATTGTTCTT+TGG | - | chr2.3:20677615-20677634 | MS.gene060191:intron | 35.0% |
| !! | CTTTATTTCTGTTAGGCACT+AGG | - | chr2.3:20677868-20677887 | MS.gene060191:intron | 35.0% |
| !!! | CTTTTTTTTTTGGTAGGCTG+TGG | + | chr2.3:20676770-20676789 | None:intergenic | 35.0% |
| !!! | TGTTCTTTGGTTTTGTGTTC+AGG | - | chr2.3:20677628-20677647 | MS.gene060191:intron | 35.0% |
| AAATAAACATGGTGCAGGGA+AGG | + | chr2.3:20676482-20676501 | None:intergenic | 40.0% | |
| AACTGATGCAATTGTGGATG+TGG | + | chr2.3:20675996-20676015 | None:intergenic | 40.0% | |
| AGCAACATTGACCTCAACAT+TGG | - | chr2.3:20676788-20676807 | MS.gene060191:intron | 40.0% | |
| CAATCAACAACCATATGTGG+TGG | + | chr2.3:20676242-20676261 | None:intergenic | 40.0% | |
| CACAATTGTCTGCAGTTTCA+AGG | - | chr2.3:20676025-20676044 | MS.gene060191:intron | 40.0% | |
| CAGAACAAAGGTCAACATAC+CGG | + | chr2.3:20675490-20675509 | None:intergenic | 40.0% | |
| CATTGTTCAACCACCACATA+TGG | - | chr2.3:20676229-20676248 | MS.gene060191:intron | 40.0% | |
| CTTGAAACTGCAGACAATTG+TGG | + | chr2.3:20676027-20676046 | None:intergenic | 40.0% | |
| GATGGAGCTAAATGACCTAA+TGG | - | chr2.3:20677209-20677228 | MS.gene060191:intron | 40.0% | |
| GCCCTTAGATCACTAAAACA+AGG | - | chr2.3:20676729-20676748 | MS.gene060191:intron | 40.0% | |
| GGACAATCAACAACCATATG+TGG | + | chr2.3:20676245-20676264 | None:intergenic | 40.0% | |
| GGTAATGTGACTACTGTGTT+TGG | - | chr2.3:20675714-20675733 | MS.gene060191:intron | 40.0% | |
| GGTATGTTGACCTTTGTTCT+GGG | - | chr2.3:20675489-20675508 | MS.gene060191:intron | 40.0% | |
| GTCATTAGAATATCCGGACA+CGG | + | chr2.3:20677687-20677706 | None:intergenic | 40.0% | |
| GTCTATTAGCAAAGAAAGGG+AGG | + | chr2.3:20676330-20676349 | None:intergenic | 40.0% | |
| GTTCGAATTGTCAGGACAAA+TGG | + | chr2.3:20676266-20676285 | None:intergenic | 40.0% | |
| TCAATTGACTGATGTCATCC+AGG | + | chr2.3:20677179-20677198 | None:intergenic | 40.0% | |
| TCAATTGAGACAGTGCAAGA+TGG | - | chr2.3:20677191-20677210 | MS.gene060191:intron | 40.0% | |
| TCTAATGACTCGAATCCGTT+TGG | - | chr2.3:20677698-20677717 | MS.gene060191:intron | 40.0% | |
| TGTTAGGCACTAGGTAGTTA+GGG | - | chr2.3:20677877-20677896 | MS.gene060191:intron | 40.0% | |
| TTCAGTGCTAACAACTAACC+TGG | - | chr2.3:20677158-20677177 | MS.gene060191:intron | 40.0% | |
| TTGGTCTGGGAAGAATTACT+GGG | - | chr2.3:20675085-20675104 | MS.gene060191:intron | 40.0% | |
| TTTGGTCTGGGAAGAATTAC+TGG | - | chr2.3:20675084-20675103 | MS.gene060191:intron | 40.0% | |
| ! | ATTGGTTTAAAGGGTGTGCT+TGG | - | chr2.3:20677597-20677616 | MS.gene060191:intron | 40.0% |
| ! | GAAGATCTTTTGCATCACCA+GGG | - | chr2.3:20676205-20676224 | MS.gene060191:intron | 40.0% |
| ! | GACTTGAGCAAGTTGAATTC+TGG | - | chr2.3:20675915-20675934 | MS.gene060191:intron | 40.0% |
| ! | GCTCTGGATTTAGAATCAGA+AGG | - | chr2.3:20674760-20674779 | MS.gene060191:intron | 40.0% |
| ! | TGAAGATCTTTTGCATCACC+AGG | - | chr2.3:20676204-20676223 | MS.gene060191:intron | 40.0% |
| ! | TGGGAAGAATTACTGGGTTT+TGG | - | chr2.3:20675091-20675110 | MS.gene060191:intron | 40.0% |
| !! | TCCCCGCTTTTAATGTTTTC+TGG | - | chr2.3:20677400-20677419 | MS.gene060191:intron | 40.0% |
| AATAGGACTGAGCTCGAAGT+TGG | - | chr2.3:20676606-20676625 | MS.gene060191:intron | 45.0% | |
| ATAGGACTGAGCTCGAAGTT+GGG | - | chr2.3:20676607-20676626 | MS.gene060191:intron | 45.0% | |
| ATTATCCAGCAACCTGCAGT+AGG | + | chr2.3:20677982-20678001 | None:intergenic | 45.0% | |
| CGGTATGTTGACCTTTGTTC+TGG | - | chr2.3:20675488-20675507 | MS.gene060191:intron | 45.0% | |
| CTGTTAGGCACTAGGTAGTT+AGG | - | chr2.3:20677876-20677895 | MS.gene060191:intron | 45.0% | |
| GAATGGGAGATATGACCTGA+AGG | - | chr2.3:20677234-20677253 | MS.gene060191:intron | 45.0% | |
| GCTCCGATCCAAGAAAATTC+TGG | + | chr2.3:20674700-20674719 | None:intergenic | 45.0% | |
| GTGACAGTGTACCAATGTTG+AGG | + | chr2.3:20676802-20676821 | None:intergenic | 45.0% | |
| GTTGCATATGCAGTATGTGC+AGG | + | chr2.3:20676512-20676531 | None:intergenic | 45.0% | |
| TCAGACAAAGGTCTTTGTGC+TGG | - | chr2.3:20675861-20675880 | MS.gene060191:intron | 45.0% | |
| TGATTCTAAATCCAGAGCGG+CGG | + | chr2.3:20674758-20674777 | None:intergenic | 45.0% | |
| TTATCCAGCAACCTGCAGTA+GGG | + | chr2.3:20677981-20678000 | None:intergenic | 45.0% | |
| TTGAAGGATCAAACCGTGTC+CGG | - | chr2.3:20677671-20677690 | MS.gene060191:intron | 45.0% | |
| TTGGATCGGAGCAACTTCAA+CGG | - | chr2.3:20674708-20674727 | MS.gene060191:intron | 45.0% | |
| TTGTGCTGGAATCAACTCCA+CGG | - | chr2.3:20675875-20675894 | MS.gene060191:intron | 45.0% | |
| ! | ATTTTCCCTGCATTATGGGC+TGG | - | chr2.3:20677366-20677385 | MS.gene060191:intron | 45.0% |
| ! | TTTTCCCTGCATTATGGGCT+GGG | - | chr2.3:20677367-20677386 | MS.gene060191:intron | 45.0% |
| !! | AGTTTGCTGAGTGACGGATA+TGG | - | chr2.3:20677498-20677517 | MS.gene060191:intron | 45.0% |
| !! | GTTTGCTGAGTGACGGATAT+GGG | - | chr2.3:20677499-20677518 | MS.gene060191:intron | 45.0% |
| !! | TTTGCTGAGTGACGGATATG+GGG | - | chr2.3:20677500-20677519 | MS.gene060191:intron | 45.0% |
| !!! | CTTATTTTTTATTTTAATTA+AGG | - | chr2.3:20674892-20674911 | MS.gene060191:CDS | 5.0% |
| AGAGCAAGAGGAACACCTTC+AGG | + | chr2.3:20677252-20677271 | None:intergenic | 50.0% | |
| ATCAACCCAGCCCATAATGC+AGG | + | chr2.3:20677375-20677394 | None:intergenic | 50.0% | |
| CACGGCTGTCAAGATAAGCA+GGG | - | chr2.3:20675893-20675912 | MS.gene060191:intron | 50.0% | |
| TCAACCCAGCCCATAATGCA+GGG | + | chr2.3:20677374-20677393 | None:intergenic | 50.0% | |
| TGGTGGTTGAACAATGTCCC+TGG | + | chr2.3:20676225-20676244 | None:intergenic | 50.0% | |
| TTGAGATTCCTCCCTACTGC+AGG | - | chr2.3:20677967-20677986 | MS.gene060191:intron | 50.0% | |
| ! | AGAGTAGCGGAAGCGAATTC+CGG | + | chr2.3:20675626-20675645 | None:intergenic | 50.0% |
| !! | GAAGGTGTTCCTCTTGCTCT+TGG | - | chr2.3:20677252-20677271 | MS.gene060191:intron | 50.0% |
| !! | TTGCTGAGTGACGGATATGG+GGG | - | chr2.3:20677501-20677520 | MS.gene060191:intron | 50.0% |
| AGAGCGGCGGAAACGATTTC+CGG | + | chr2.3:20674745-20674764 | None:intergenic | 55.0% | |
| CCACGGCTGTCAAGATAAGC+AGG | - | chr2.3:20675892-20675911 | MS.gene060191:intron | 55.0% | |
| CCTGCTTATCTTGACAGCCG+TGG | + | chr2.3:20675895-20675914 | None:intergenic | 55.0% | |
| GGAAACGATTTCCGGTGCGT+CGG | + | chr2.3:20674737-20674756 | None:intergenic | 55.0% | |
| GGAATTCGCTTCCGCTACTC+TGG | - | chr2.3:20675625-20675644 | MS.gene060191:intron | 55.0% | |
| TGCGCATAGTGGCTGTTCTG+TGG | - | chr2.3:20676175-20676194 | MS.gene060191:intron | 55.0% | |
| GGAAATCGTTTCCGCCGCTC+TGG | - | chr2.3:20674744-20674763 | MS.gene060191:intron | 60.0% | |
| GGAAGCGAATTCCGGTGCGT+CGG | + | chr2.3:20675618-20675637 | None:intergenic | 60.0% | |
| TCCAGCAACCTGCAGTAGGG+AGG | + | chr2.3:20677978-20677997 | None:intergenic | 60.0% | |
| TCCTCCCTACTGCAGGTTGC+TGG | - | chr2.3:20677974-20677993 | MS.gene060191:intron | 60.0% | |
| TTCAACGGCGACCGACGCAC+CGG | - | chr2.3:20674723-20674742 | MS.gene060191:intron | 65.0% | |
| ! | AATTCCGGTGCGTCGGTCGG+CGG | + | chr2.3:20675611-20675630 | None:intergenic | 65.0% |
| ! | GCGAATTCCGGTGCGTCGGT+CGG | + | chr2.3:20675614-20675633 | None:intergenic | 65.0% |
| TTCTCCGCCGACCGACGCAC+CGG | - | chr2.3:20675604-20675623 | MS.gene060191:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 20674569 | 20678010 | 20674569 | ID=MS.gene060191 |
| chr2.3 | mRNA | 20674569 | 20678010 | 20674569 | ID=MS.gene060191.t1;Parent=MS.gene060191 |
| chr2.3 | exon | 20677995 | 20678010 | 20677995 | ID=MS.gene060191.t1.exon1;Parent=MS.gene060191.t1 |
| chr2.3 | CDS | 20677995 | 20678010 | 20677995 | ID=cds.MS.gene060191.t1;Parent=MS.gene060191.t1 |
| chr2.3 | exon | 20677798 | 20677878 | 20677798 | ID=MS.gene060191.t1.exon2;Parent=MS.gene060191.t1 |
| chr2.3 | CDS | 20677798 | 20677878 | 20677798 | ID=cds.MS.gene060191.t1;Parent=MS.gene060191.t1 |
| chr2.3 | exon | 20677351 | 20677378 | 20677351 | ID=MS.gene060191.t1.exon3;Parent=MS.gene060191.t1 |
| chr2.3 | CDS | 20677351 | 20677378 | 20677351 | ID=cds.MS.gene060191.t1;Parent=MS.gene060191.t1 |
| chr2.3 | exon | 20676916 | 20677029 | 20676916 | ID=MS.gene060191.t1.exon4;Parent=MS.gene060191.t1 |
| chr2.3 | CDS | 20676916 | 20677029 | 20676916 | ID=cds.MS.gene060191.t1;Parent=MS.gene060191.t1 |
| chr2.3 | exon | 20676643 | 20676734 | 20676643 | ID=MS.gene060191.t1.exon5;Parent=MS.gene060191.t1 |
| chr2.3 | CDS | 20676643 | 20676734 | 20676643 | ID=cds.MS.gene060191.t1;Parent=MS.gene060191.t1 |
| chr2.3 | exon | 20676128 | 20676192 | 20676128 | ID=MS.gene060191.t1.exon6;Parent=MS.gene060191.t1 |
| chr2.3 | CDS | 20676128 | 20676192 | 20676128 | ID=cds.MS.gene060191.t1;Parent=MS.gene060191.t1 |
| chr2.3 | exon | 20674838 | 20674929 | 20674838 | ID=MS.gene060191.t1.exon7;Parent=MS.gene060191.t1 |
| chr2.3 | CDS | 20674838 | 20674929 | 20674838 | ID=cds.MS.gene060191.t1;Parent=MS.gene060191.t1 |
| chr2.3 | exon | 20674569 | 20674590 | 20674569 | ID=MS.gene060191.t1.exon8;Parent=MS.gene060191.t1 |
| chr2.3 | CDS | 20674569 | 20674590 | 20674569 | ID=cds.MS.gene060191.t1;Parent=MS.gene060191.t1 |
| Gene Sequence |
| Protein sequence |
