Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97597.t1 | XP_003621334.1 | 96.5 | 371 | 11 | 1 | 1 | 371 | 1 | 369 | 1.60E-204 | 721.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97597.t1 | P93324 | 61.9 | 367 | 136 | 3 | 7 | 371 | 8 | 372 | 1.0e-127 | 458.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97597.t1 | G7L362 | 96.5 | 371 | 11 | 1 | 1 | 371 | 1 | 369 | 1.1e-204 | 721.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene97597 | 0.817029 | 4.08E-52 | -1.69E-46 |
| MS.gene049549 | MS.gene97597 | 0.821019 | 5.04E-53 | -1.69E-46 |
| MS.gene049611 | MS.gene97597 | 0.804665 | 1.94E-49 | -1.69E-46 |
| MS.gene050809 | MS.gene97597 | 0.806108 | 9.65E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene97597 | 0.801 | 1.11E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene97597 | 0.818954 | 1.50E-52 | -1.69E-46 |
| MS.gene051632 | MS.gene97597 | 0.807109 | 5.94E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene97597 | 0.802585 | 5.23E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene97597 | 0.848631 | 5.42E-60 | -1.69E-46 |
| MS.gene052606 | MS.gene97597 | 0.806115 | 9.62E-50 | -1.69E-46 |
| MS.gene052702 | MS.gene97597 | 0.866149 | 3.52E-65 | -1.69E-46 |
| MS.gene052706 | MS.gene97597 | 0.818664 | 1.74E-52 | -1.69E-46 |
| MS.gene052805 | MS.gene97597 | 0.806159 | 9.42E-50 | -1.69E-46 |
| MS.gene053887 | MS.gene97597 | 0.813493 | 2.49E-51 | -1.69E-46 |
| MS.gene054146 | MS.gene97597 | 0.800478 | 1.41E-48 | -1.69E-46 |
| MS.gene054181 | MS.gene97597 | 0.837056 | 6.51E-57 | -1.69E-46 |
| MS.gene054277 | MS.gene97597 | 0.818615 | 1.79E-52 | -1.69E-46 |
| MS.gene054290 | MS.gene97597 | 0.84933 | 3.46E-60 | -1.69E-46 |
| MS.gene054706 | MS.gene97597 | 0.803573 | 3.27E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene97597 | 0.835934 | 1.26E-56 | -1.69E-46 |
| MS.gene05483 | MS.gene97597 | 0.812257 | 4.64E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene97597 | 0.811621 | 6.39E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene97597 | 0.801153 | 1.03E-48 | -1.69E-46 |
| MS.gene055959 | MS.gene97597 | 0.826594 | 2.49E-54 | -1.69E-46 |
| MS.gene056590 | MS.gene97597 | 0.854782 | 9.79E-62 | -1.69E-46 |
| MS.gene056591 | MS.gene97597 | 0.853624 | 2.11E-61 | -1.69E-46 |
| MS.gene056697 | MS.gene97597 | 0.835341 | 1.78E-56 | -1.69E-46 |
| MS.gene056748 | MS.gene97597 | 0.815817 | 7.61E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene97597 | 0.843392 | 1.44E-58 | -1.69E-46 |
| MS.gene056920 | MS.gene97597 | 0.824244 | 8.97E-54 | -1.69E-46 |
| MS.gene057261 | MS.gene97597 | 0.819882 | 9.20E-53 | -1.69E-46 |
| MS.gene057544 | MS.gene97597 | 0.92614 | 7.06E-91 | -1.69E-46 |
| MS.gene057549 | MS.gene97597 | 0.809473 | 1.86E-50 | -1.69E-46 |
| MS.gene058067 | MS.gene97597 | 0.814546 | 1.46E-51 | -1.69E-46 |
| MS.gene058093 | MS.gene97597 | 0.831426 | 1.68E-55 | -1.69E-46 |
| MS.gene058099 | MS.gene97597 | 0.806405 | 8.36E-50 | -1.69E-46 |
| MS.gene058158 | MS.gene97597 | 0.827969 | 1.17E-54 | -1.69E-46 |
| MS.gene058603 | MS.gene97597 | 0.810941 | 8.97E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene97597 | -0.802332 | 5.90E-49 | -1.69E-46 |
| MS.gene059315 | MS.gene97597 | 0.800781 | 1.23E-48 | -1.69E-46 |
| MS.gene059402 | MS.gene97597 | 0.832656 | 8.35E-56 | -1.69E-46 |
| MS.gene059953 | MS.gene97597 | 0.843231 | 1.59E-58 | -1.69E-46 |
| MS.gene059955 | MS.gene97597 | 0.844441 | 7.55E-59 | -1.69E-46 |
| MS.gene060087 | MS.gene97597 | 0.823423 | 1.40E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97597.t1 | MTR_7g012020 | 96.496 | 371 | 11 | 1 | 1 | 371 | 1 | 369 | 0.0 | 738 |
| MS.gene97597.t1 | MTR_7g012040 | 80.054 | 371 | 71 | 2 | 1 | 371 | 1 | 368 | 0.0 | 612 |
| MS.gene97597.t1 | MTR_7g011900 | 77.297 | 370 | 82 | 1 | 2 | 371 | 3 | 370 | 0.0 | 597 |
| MS.gene97597.t1 | MTR_7g011990 | 73.854 | 371 | 90 | 2 | 2 | 371 | 3 | 367 | 0.0 | 570 |
| MS.gene97597.t1 | MTR_7g012070 | 72.922 | 373 | 98 | 2 | 2 | 371 | 3 | 375 | 0.0 | 568 |
| MS.gene97597.t1 | MTR_7g012090 | 72.922 | 373 | 98 | 2 | 2 | 371 | 3 | 375 | 0.0 | 565 |
| MS.gene97597.t1 | MTR_7g012020 | 95.985 | 274 | 9 | 1 | 1 | 274 | 1 | 272 | 0.0 | 538 |
| MS.gene97597.t1 | MTR_2g055940 | 68.750 | 352 | 107 | 1 | 20 | 371 | 15 | 363 | 0.0 | 510 |
| MS.gene97597.t1 | MTR_7g012020 | 95.276 | 254 | 10 | 1 | 1 | 254 | 1 | 252 | 2.77e-178 | 495 |
| MS.gene97597.t1 | MTR_1g096310 | 62.125 | 367 | 135 | 3 | 7 | 371 | 8 | 372 | 1.32e-166 | 470 |
| MS.gene97597.t1 | MTR_3g021440 | 53.134 | 367 | 162 | 6 | 10 | 371 | 9 | 370 | 1.27e-128 | 374 |
| MS.gene97597.t1 | MTR_3g021430 | 53.039 | 362 | 163 | 6 | 12 | 371 | 1 | 357 | 1.27e-127 | 371 |
| MS.gene97597.t1 | MTR_1g036490 | 48.787 | 371 | 184 | 6 | 4 | 371 | 3 | 370 | 4.12e-127 | 370 |
| MS.gene97597.t1 | MTR_1g036460 | 48.787 | 371 | 184 | 5 | 4 | 371 | 3 | 370 | 7.75e-127 | 369 |
| MS.gene97597.t1 | MTR_1g036510 | 50.565 | 354 | 170 | 4 | 21 | 371 | 33 | 384 | 6.98e-119 | 349 |
| MS.gene97597.t1 | MTR_3g092900 | 45.042 | 353 | 188 | 5 | 20 | 371 | 16 | 363 | 6.67e-103 | 308 |
| MS.gene97597.t1 | MTR_5g098170 | 42.308 | 364 | 198 | 9 | 13 | 371 | 7 | 363 | 3.65e-93 | 283 |
| MS.gene97597.t1 | MTR_7g118300 | 41.892 | 370 | 206 | 8 | 4 | 371 | 13 | 375 | 7.96e-92 | 280 |
| MS.gene97597.t1 | MTR_0591s0010 | 39.178 | 365 | 209 | 8 | 13 | 371 | 20 | 377 | 2.38e-84 | 261 |
| MS.gene97597.t1 | MTR_1g036510 | 53.333 | 255 | 115 | 3 | 21 | 273 | 33 | 285 | 2.39e-84 | 258 |
| MS.gene97597.t1 | MTR_1g050220 | 43.769 | 329 | 133 | 6 | 25 | 351 | 6 | 284 | 1.56e-83 | 256 |
| MS.gene97597.t1 | MTR_7g118320 | 38.420 | 367 | 211 | 9 | 12 | 371 | 4 | 362 | 8.85e-81 | 251 |
| MS.gene97597.t1 | MTR_8g068690 | 38.462 | 364 | 213 | 8 | 13 | 371 | 19 | 376 | 1.53e-79 | 249 |
| MS.gene97597.t1 | MTR_8g068750 | 37.363 | 364 | 217 | 8 | 13 | 371 | 20 | 377 | 3.38e-77 | 243 |
| MS.gene97597.t1 | MTR_8g068870 | 38.484 | 343 | 199 | 8 | 34 | 371 | 28 | 363 | 1.94e-76 | 240 |
| MS.gene97597.t1 | MTR_1g036510 | 51.709 | 234 | 109 | 3 | 21 | 252 | 33 | 264 | 1.15e-72 | 227 |
| MS.gene97597.t1 | MTR_8g024160 | 37.183 | 355 | 176 | 6 | 18 | 371 | 20 | 328 | 3.28e-70 | 223 |
| MS.gene97597.t1 | MTR_6g060290 | 61.290 | 186 | 52 | 3 | 2 | 185 | 3 | 170 | 3.60e-69 | 215 |
| MS.gene97597.t1 | MTR_6g078850 | 37.709 | 358 | 209 | 8 | 20 | 370 | 32 | 382 | 1.08e-67 | 221 |
| MS.gene97597.t1 | MTR_8g068570 | 36.364 | 330 | 175 | 6 | 13 | 338 | 20 | 318 | 6.76e-66 | 212 |
| MS.gene97597.t1 | MTR_2g072790 | 37.423 | 326 | 190 | 9 | 32 | 352 | 20 | 336 | 5.17e-64 | 208 |
| MS.gene97597.t1 | MTR_3g096050 | 35.977 | 353 | 209 | 8 | 25 | 371 | 17 | 358 | 1.87e-60 | 199 |
| MS.gene97597.t1 | MTR_8g068730 | 33.791 | 364 | 198 | 10 | 13 | 371 | 20 | 345 | 2.86e-58 | 192 |
| MS.gene97597.t1 | MTR_3g096070 | 35.119 | 336 | 183 | 8 | 25 | 356 | 17 | 321 | 4.48e-55 | 184 |
| MS.gene97597.t1 | MTR_8g068690 | 38.202 | 267 | 156 | 6 | 13 | 275 | 19 | 280 | 6.35e-55 | 182 |
| MS.gene97597.t1 | MTR_0017s0100 | 33.333 | 339 | 203 | 12 | 40 | 370 | 44 | 367 | 6.03e-50 | 172 |
| MS.gene97597.t1 | MTR_8g068600 | 36.822 | 258 | 147 | 6 | 45 | 291 | 27 | 279 | 9.09e-48 | 164 |
| MS.gene97597.t1 | MTR_0079s0070 | 34.356 | 326 | 192 | 11 | 40 | 357 | 10 | 321 | 3.26e-47 | 164 |
| MS.gene97597.t1 | MTR_4g038440 | 34.251 | 327 | 193 | 11 | 39 | 357 | 43 | 355 | 1.03e-46 | 163 |
| MS.gene97597.t1 | MTR_3g083620 | 31.269 | 323 | 205 | 7 | 38 | 356 | 38 | 347 | 2.26e-46 | 162 |
| MS.gene97597.t1 | MTR_8g068740 | 33.692 | 279 | 144 | 8 | 13 | 287 | 20 | 261 | 2.64e-43 | 152 |
| MS.gene97597.t1 | MTR_1g076940 | 28.319 | 339 | 226 | 7 | 39 | 370 | 32 | 360 | 2.02e-42 | 152 |
| MS.gene97597.t1 | MTR_3g096050 | 36.400 | 250 | 151 | 5 | 25 | 273 | 17 | 259 | 1.99e-41 | 146 |
| MS.gene97597.t1 | MTR_5g074600 | 27.326 | 344 | 233 | 8 | 33 | 370 | 26 | 358 | 2.99e-38 | 140 |
| MS.gene97597.t1 | MTR_5g074680 | 28.198 | 344 | 230 | 9 | 33 | 370 | 27 | 359 | 4.29e-38 | 140 |
| MS.gene97597.t1 | MTR_5g074580 | 28.488 | 344 | 229 | 9 | 33 | 370 | 27 | 359 | 7.52e-38 | 139 |
| MS.gene97597.t1 | MTR_4g033015 | 32.840 | 338 | 209 | 9 | 39 | 366 | 32 | 361 | 1.12e-37 | 139 |
| MS.gene97597.t1 | MTR_4g088345 | 29.532 | 342 | 217 | 11 | 37 | 370 | 30 | 355 | 1.85e-37 | 138 |
| MS.gene97597.t1 | MTR_7g024520 | 28.783 | 337 | 216 | 10 | 37 | 369 | 29 | 345 | 2.02e-37 | 138 |
| MS.gene97597.t1 | MTR_7g014510 | 27.245 | 323 | 217 | 7 | 40 | 356 | 33 | 343 | 5.21e-37 | 137 |
| MS.gene97597.t1 | MTR_4g088340 | 27.859 | 341 | 224 | 9 | 37 | 370 | 7 | 332 | 8.84e-37 | 136 |
| MS.gene97597.t1 | MTR_4g033200 | 32.544 | 338 | 210 | 9 | 39 | 366 | 32 | 361 | 9.34e-37 | 137 |
| MS.gene97597.t1 | MTR_7g014570 | 28.060 | 335 | 221 | 8 | 40 | 370 | 33 | 351 | 2.81e-36 | 135 |
| MS.gene97597.t1 | MTR_8g068620 | 52.727 | 110 | 52 | 0 | 165 | 274 | 2 | 111 | 8.01e-36 | 127 |
| MS.gene97597.t1 | MTR_7g024500 | 28.319 | 339 | 215 | 10 | 37 | 369 | 29 | 345 | 1.17e-35 | 133 |
| MS.gene97597.t1 | MTR_4g079160 | 30.793 | 328 | 198 | 12 | 40 | 356 | 32 | 341 | 1.40e-35 | 133 |
| MS.gene97597.t1 | MTR_4g088200 | 29.730 | 333 | 216 | 9 | 33 | 357 | 26 | 348 | 3.16e-34 | 130 |
| MS.gene97597.t1 | MTR_5g074540 | 31.390 | 223 | 144 | 4 | 141 | 356 | 107 | 327 | 2.09e-33 | 127 |
| MS.gene97597.t1 | MTR_4g033150 | 29.674 | 337 | 221 | 8 | 39 | 366 | 32 | 361 | 1.21e-32 | 125 |
| MS.gene97597.t1 | MTR_5g074610 | 28.689 | 244 | 140 | 5 | 133 | 370 | 110 | 325 | 8.97e-29 | 114 |
| MS.gene97597.t1 | MTR_4g088190 | 29.641 | 334 | 218 | 8 | 33 | 357 | 26 | 351 | 1.17e-28 | 114 |
| MS.gene97597.t1 | MTR_4g038440 | 33.613 | 238 | 143 | 7 | 40 | 273 | 44 | 270 | 3.18e-28 | 111 |
| MS.gene97597.t1 | MTR_1g076930 | 28.099 | 242 | 158 | 6 | 37 | 273 | 7 | 237 | 1.50e-27 | 109 |
| MS.gene97597.t1 | MTR_4g033170 | 29.119 | 261 | 168 | 7 | 39 | 295 | 32 | 279 | 3.81e-27 | 110 |
| MS.gene97597.t1 | MTR_4g033085 | 29.231 | 260 | 167 | 7 | 39 | 294 | 32 | 278 | 8.64e-26 | 107 |
| MS.gene97597.t1 | MTR_6g060280 | 76.364 | 55 | 8 | 1 | 225 | 274 | 1 | 55 | 2.51e-20 | 84.3 |
| MS.gene97597.t1 | MTR_0794s0020 | 28.319 | 226 | 149 | 7 | 39 | 259 | 32 | 249 | 6.81e-18 | 82.8 |
| MS.gene97597.t1 | MTR_8g068760 | 38.000 | 100 | 60 | 2 | 273 | 371 | 135 | 233 | 1.14e-13 | 70.1 |
| MS.gene97597.t1 | MTR_8g068580 | 37.234 | 94 | 53 | 3 | 281 | 371 | 43 | 133 | 3.77e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97597.t1 | AT5G54160 | 46.742 | 353 | 180 | 5 | 20 | 371 | 16 | 361 | 4.99e-106 | 316 |
| MS.gene97597.t1 | AT1G77520 | 38.649 | 370 | 214 | 7 | 11 | 371 | 16 | 381 | 4.68e-86 | 266 |
| MS.gene97597.t1 | AT1G51990 | 37.394 | 353 | 216 | 4 | 20 | 370 | 12 | 361 | 1.76e-83 | 258 |
| MS.gene97597.t1 | AT1G51990 | 37.394 | 353 | 216 | 4 | 20 | 370 | 12 | 361 | 1.04e-82 | 256 |
| MS.gene97597.t1 | AT1G77530 | 40.449 | 356 | 200 | 7 | 24 | 371 | 30 | 381 | 2.72e-77 | 243 |
| MS.gene97597.t1 | AT1G33030 | 39.143 | 350 | 199 | 9 | 27 | 371 | 10 | 350 | 1.13e-75 | 238 |
| MS.gene97597.t1 | AT1G63140 | 37.950 | 361 | 210 | 7 | 20 | 371 | 26 | 381 | 2.70e-74 | 235 |
| MS.gene97597.t1 | AT1G63140 | 37.275 | 389 | 218 | 9 | 4 | 371 | 18 | 401 | 4.48e-74 | 235 |
| MS.gene97597.t1 | AT1G21130 | 39.276 | 359 | 200 | 10 | 14 | 361 | 13 | 364 | 2.49e-73 | 233 |
| MS.gene97597.t1 | AT1G21100 | 38.936 | 357 | 200 | 10 | 16 | 361 | 15 | 364 | 7.71e-73 | 231 |
| MS.gene97597.t1 | AT1G21110 | 39.776 | 357 | 197 | 10 | 16 | 361 | 15 | 364 | 3.15e-72 | 230 |
| MS.gene97597.t1 | AT1G21120 | 38.936 | 357 | 200 | 10 | 16 | 361 | 15 | 364 | 3.24e-71 | 227 |
| MS.gene97597.t1 | AT1G21120 | 38.936 | 357 | 200 | 10 | 16 | 361 | 63 | 412 | 1.46e-70 | 227 |
| MS.gene97597.t1 | AT5G53810 | 36.812 | 345 | 203 | 8 | 37 | 371 | 39 | 378 | 2.64e-69 | 222 |
| MS.gene97597.t1 | AT1G76790 | 38.108 | 370 | 204 | 11 | 17 | 371 | 6 | 365 | 1.52e-65 | 212 |
| MS.gene97597.t1 | AT3G53140 | 35.650 | 331 | 192 | 7 | 32 | 351 | 20 | 340 | 2.21e-60 | 199 |
| MS.gene97597.t1 | AT1G62900 | 41.748 | 206 | 117 | 2 | 168 | 371 | 1 | 205 | 2.82e-53 | 175 |
| MS.gene97597.t1 | AT5G37170 | 33.856 | 319 | 169 | 9 | 62 | 371 | 49 | 334 | 1.69e-51 | 175 |
| MS.gene97597.t1 | AT1G33030 | 38.956 | 249 | 144 | 6 | 27 | 273 | 10 | 252 | 3.95e-51 | 172 |
| MS.gene97597.t1 | AT1G33030 | 38.956 | 249 | 144 | 6 | 27 | 273 | 10 | 252 | 4.57e-51 | 172 |
| MS.gene97597.t1 | AT5G37170 | 39.899 | 198 | 115 | 3 | 177 | 371 | 38 | 234 | 3.33e-48 | 163 |
| MS.gene97597.t1 | AT1G63140 | 37.241 | 290 | 159 | 7 | 4 | 274 | 18 | 303 | 1.37e-45 | 159 |
| MS.gene97597.t1 | AT1G21130 | 40.074 | 272 | 147 | 9 | 14 | 276 | 13 | 277 | 1.45e-45 | 158 |
| MS.gene97597.t1 | AT5G37170 | 39.572 | 187 | 109 | 3 | 188 | 371 | 1 | 186 | 5.94e-45 | 153 |
| MS.gene97597.t1 | AT1G77530 | 41.702 | 235 | 128 | 5 | 24 | 252 | 30 | 261 | 1.51e-41 | 147 |
| MS.gene97597.t1 | AT4G35150 | 33.654 | 208 | 124 | 4 | 161 | 356 | 105 | 310 | 3.51e-37 | 137 |
| MS.gene97597.t1 | AT4G35160 | 32.343 | 303 | 184 | 9 | 70 | 356 | 70 | 367 | 5.13e-37 | 138 |
| MS.gene97597.t1 | AT1G63140 | 36.000 | 275 | 153 | 7 | 4 | 259 | 18 | 288 | 4.42e-36 | 133 |
Find 70 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAATGGTGATTCTTATT+TGG | 0.110334 | 7.4:+87322238 | MS.gene97597:CDS |
| GGTAGCATAGTGAGAGTTTA+TGG | 0.246664 | 7.4:+87322182 | MS.gene97597:CDS |
| TTTGTTGGTTCTAGATCTTC+TGG | 0.251949 | 7.4:-87324101 | None:intergenic |
| TGTGAAGGAATATGAGAGTT+TGG | 0.271292 | 7.4:+87324190 | MS.gene97597:CDS |
| GAAAATGGTGATTCTTATTT+GGG | 0.280555 | 7.4:+87322239 | MS.gene97597:CDS |
| TGTCTTGCTTTCTCTATCAT+TGG | 0.299632 | 7.4:+87324248 | MS.gene97597:CDS |
| ATTCTCTTTATCATTGGTAT+AGG | 0.305034 | 7.4:-87321871 | None:intergenic |
| GTCTCACCCTGCTTTGTCAA+TGG | 0.339346 | 7.4:+87322280 | MS.gene97597:CDS |
| CTCTAAATACCCATCAATAA+AGG | 0.344031 | 7.4:+87323313 | MS.gene97597:CDS |
| AAATTAATTGCCTTTATTGA+TGG | 0.347116 | 7.4:-87323323 | None:intergenic |
| AACATACGATCGAGCCTATT+CGG | 0.354147 | 7.4:-87322104 | None:intergenic |
| CACATGATTCTCTTTATCAT+TGG | 0.364383 | 7.4:-87321877 | None:intergenic |
| TCTAGGCTGTCAGCCATAAT+TGG | 0.371583 | 7.4:+87323991 | MS.gene97597:intron |
| TATGGTACTTGGTGCCAATA+TGG | 0.415869 | 7.4:+87321947 | MS.gene97597:CDS |
| TTCTAGATCTTCTGGTTGCA+AGG | 0.420081 | 7.4:-87324093 | None:intergenic |
| CTCTTCTGTCTGTTTCTACT+CGG | 0.428133 | 7.4:+87322147 | MS.gene97597:CDS |
| AATTAATTGCCTTTATTGAT+GGG | 0.430852 | 7.4:-87323322 | None:intergenic |
| TACAAAGCTTTGCCACCAAA+TGG | 0.432948 | 7.4:+87324050 | MS.gene97597:CDS |
| AGCCATCGAGATACATTTGT+TGG | 0.440383 | 7.4:-87324116 | None:intergenic |
| CATTTAGGCATTGAATATGT+TGG | 0.442708 | 7.4:+87323471 | MS.gene97597:intron |
| GTGAAGGAATATGAGAGTTT+GGG | 0.444889 | 7.4:+87324191 | MS.gene97597:CDS |
| AACCGCAGGAAACACCATAT+TGG | 0.452926 | 7.4:-87321961 | None:intergenic |
| GAGAGTTTGGGAAAACGATC+TGG | 0.456073 | 7.4:+87324203 | MS.gene97597:CDS |
| TATCATTGTCATCTATTTGT+GGG | 0.458069 | 7.4:-87321914 | None:intergenic |
| ATATCAACTTTGGTTGATGT+AGG | 0.461312 | 7.4:+87323257 | MS.gene97597:CDS |
| TTGATATTCCCTCAAATCCT+TGG | 0.462356 | 7.4:-87323241 | None:intergenic |
| CACTATGCTACCATCATCAT+TGG | 0.468574 | 7.4:-87322171 | None:intergenic |
| ATGAGAATGAGCTTTCCATT+TGG | 0.475637 | 7.4:-87324065 | None:intergenic |
| TATCAACTTTGGTTGATGTA+GGG | 0.479740 | 7.4:+87323258 | MS.gene97597:CDS |
| TTTATTTGATATCATTGCTA+AGG | 0.484926 | 7.4:+87322007 | MS.gene97597:CDS |
| ATCAACTTTGGTTGATGTAG+GGG | 0.485080 | 7.4:+87323259 | MS.gene97597:CDS |
| GTATCATTGTCATCTATTTG+TGG | 0.485841 | 7.4:-87321915 | None:intergenic |
| ACACTCTCTGCTATGGTACT+TGG | 0.489061 | 7.4:+87321936 | MS.gene97597:CDS |
| AGAATGAGCTTTCCATTTGG+TGG | 0.491504 | 7.4:-87324062 | None:intergenic |
| GTAGCATAGTGAGAGTTTAT+GGG | 0.492258 | 7.4:+87322183 | MS.gene97597:CDS |
| ATTTGAGGGAATATCAACTT+TGG | 0.500220 | 7.4:+87323247 | MS.gene97597:CDS |
| AAGGAAAGTTCACATAATGA+TGG | 0.500299 | 7.4:+87322026 | MS.gene97597:CDS |
| AACACTCTGATTTACCGAAT+AGG | 0.509665 | 7.4:+87322090 | MS.gene97597:CDS |
| TTTCTCTATCATTGGAGTGA+TGG | 0.521287 | 7.4:+87324256 | MS.gene97597:CDS |
| TAACTTTGAAGCAATTTCAA+AGG | 0.526373 | 7.4:-87322060 | None:intergenic |
| TCTAGATCTTCTGGTTGCAA+GGG | 0.529836 | 7.4:-87324092 | None:intergenic |
| AGGAGATGTCATAATGATCA+AGG | 0.530011 | 7.4:+87323521 | MS.gene97597:CDS |
| TACCACACCATTGACAAAGC+AGG | 0.536967 | 7.4:-87322287 | None:intergenic |
| TTAGGCATTGAATATGTTGG+AGG | 0.537928 | 7.4:+87323474 | MS.gene97597:intron |
| GTTTATGGGATCACACCATC+TGG | 0.539788 | 7.4:+87322197 | MS.gene97597:CDS |
| GAAGCAATTATTGATCCAGA+AGG | 0.539977 | 7.4:+87323086 | MS.gene97597:CDS |
| AAGCAATTATTGATCCAGAA+GGG | 0.545644 | 7.4:+87323087 | MS.gene97597:CDS |
| TTAAATATTTCATTTATCTG+TGG | 0.548437 | 7.4:-87323164 | None:intergenic |
| AACATGATGTTTGTCACAGC+TGG | 0.557381 | 7.4:+87324152 | MS.gene97597:CDS |
| CAATGATACACTCTCTGCTA+TGG | 0.557805 | 7.4:+87321929 | MS.gene97597:CDS |
| GGTAAATCAGAGTGTTGAGT+TGG | 0.557814 | 7.4:-87322083 | None:intergenic |
| GAAAATACACCACCTTGTCC+AGG | 0.565413 | 7.4:+87323365 | MS.gene97597:CDS |
| GTTTGTCACAGCTGGTGGAA+TGG | 0.572866 | 7.4:+87324160 | MS.gene97597:CDS |
| TTGACAAAATATTTACCAGA+TGG | 0.581272 | 7.4:-87322212 | None:intergenic |
| ATTGCAGCGTTAAGAACCGC+AGG | 0.587759 | 7.4:-87321975 | None:intergenic |
| ATCATTATGACATCTCCTTG+TGG | 0.589120 | 7.4:-87323516 | None:intergenic |
| TCTACTCGGACCAATGATGA+TGG | 0.591740 | 7.4:+87322161 | MS.gene97597:CDS |
| ACCACACCATTGACAAAGCA+GGG | 0.592656 | 7.4:-87322286 | None:intergenic |
| ATCATTGTCATCTATTTGTG+GGG | 0.602565 | 7.4:-87321913 | None:intergenic |
| ACCCTGCTTTGTCAATGGTG+TGG | 0.605546 | 7.4:+87322285 | MS.gene97597:CDS |
| AACCAACAAATGTATCTCGA+TGG | 0.605786 | 7.4:+87324114 | MS.gene97597:CDS |
| ATGATGTTTGTCACAGCTGG+TGG | 0.606417 | 7.4:+87324155 | MS.gene97597:CDS |
| AATATTTAACAAATCAATGA+CGG | 0.613308 | 7.4:+87323178 | MS.gene97597:CDS |
| TCAACTTTGGTTGATGTAGG+GGG | 0.614546 | 7.4:+87323260 | MS.gene97597:CDS |
| AGCAATTATTGATCCAGAAG+GGG | 0.627732 | 7.4:+87323088 | MS.gene97597:CDS |
| AGAAATGGATTACCTGGACA+AGG | 0.660847 | 7.4:-87323377 | None:intergenic |
| TGCCAATATGGTGTTTCCTG+CGG | 0.681065 | 7.4:+87321959 | MS.gene97597:CDS |
| ATGTTTGAAAGTGTTCCACA+AGG | 0.690688 | 7.4:+87323501 | MS.gene97597:CDS |
| TGGAATGGAAAGAAGTGTGA+AGG | 0.698054 | 7.4:+87324175 | MS.gene97597:CDS |
| AATGGATTACCTGGACAAGG+TGG | 0.711936 | 7.4:-87323374 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTACTTATTTAAAAAC+TGG | + | chr7.4:87322533-87322552 | MS.gene97597:intron | 10.0% |
| !! | TAAAAAAATTGAATATTTGT+AGG | + | chr7.4:87322488-87322507 | MS.gene97597:intron | 10.0% |
| !!! | AAAATATTTTTATAATGTGT+AGG | + | chr7.4:87323051-87323070 | MS.gene97597:intron | 10.0% |
| !!! | AAACATTCTAAAAAATAAAT+AGG | + | chr7.4:87323677-87323696 | MS.gene97597:intron | 10.0% |
| !! | AAAATTTCCAAATTTCATTT+AGG | + | chr7.4:87323456-87323475 | MS.gene97597:intron | 15.0% |
| !! | AATATTTAACAAATCAATGA+CGG | + | chr7.4:87323178-87323197 | MS.gene97597:CDS | 15.0% |
| !! | ATCAAACTTATAAAATTTCA+TGG | - | chr7.4:87322799-87322818 | None:intergenic | 15.0% |
| !! | ATGTTGTGTATAATAAATTA+TGG | - | chr7.4:87322932-87322951 | None:intergenic | 15.0% |
| !! | CTCATTTATTAAAACTAATA+TGG | + | chr7.4:87323820-87323839 | MS.gene97597:intron | 15.0% |
| !! | TGTTGTGTATAATAAATTAT+GGG | - | chr7.4:87322931-87322950 | None:intergenic | 15.0% |
| !! | TTAAATATTTCATTTATCTG+TGG | - | chr7.4:87323167-87323186 | None:intergenic | 15.0% |
| !!! | ATTCTTCAGTTTTTAATTTT+TGG | - | chr7.4:87323896-87323915 | None:intergenic | 15.0% |
| !!! | ATTTCCTTTTAAAATATTAG+AGG | - | chr7.4:87323743-87323762 | None:intergenic | 15.0% |
| !!! | GATACATATAACAAATTTTT+AGG | - | chr7.4:87323777-87323796 | None:intergenic | 15.0% |
| !!! | TTTCCTTTTAAAATATTAGA+GGG | - | chr7.4:87323742-87323761 | None:intergenic | 15.0% |
| !! | AAAAATTATCACATGAGAAA+TGG | - | chr7.4:87323395-87323414 | None:intergenic | 20.0% |
| !! | AAATCGTGAATATAAATTGT+AGG | + | chr7.4:87322573-87322592 | MS.gene97597:intron | 20.0% |
| !! | AAATTAATTGCCTTTATTGA+TGG | - | chr7.4:87323326-87323345 | None:intergenic | 20.0% |
| !! | AATTAATTGCCTTTATTGAT+GGG | - | chr7.4:87323325-87323344 | None:intergenic | 20.0% |
| !! | ATATGGATGTATTAATTCTT+AGG | + | chr7.4:87323837-87323856 | MS.gene97597:intron | 20.0% |
| !! | ATGTAAAAACTAAAACTAGT+GGG | - | chr7.4:87323578-87323597 | None:intergenic | 20.0% |
| !! | CTACAATAACTAATATCATT+AGG | - | chr7.4:87322879-87322898 | None:intergenic | 20.0% |
| !! | CTTTAACAAAATCATTACAA+TGG | + | chr7.4:87322748-87322767 | MS.gene97597:intron | 20.0% |
| !! | TATGTAAAAACTAAAACTAG+TGG | - | chr7.4:87323579-87323598 | None:intergenic | 20.0% |
| !! | TTTATTTGATATCATTGCTA+AGG | + | chr7.4:87322007-87322026 | MS.gene97597:CDS | 20.0% |
| !!! | TAACATTATTTTTGTATCCT+TGG | + | chr7.4:87323953-87323972 | MS.gene97597:intron | 20.0% |
| !!! | TATTTTGTCAAGTATGAAAA+TGG | + | chr7.4:87322224-87322243 | MS.gene97597:CDS | 20.0% |
| ! | AAGAATTATGCTTTCATACA+TGG | - | chr7.4:87322379-87322398 | None:intergenic | 25.0% |
| ! | AGAATTATGCTTTCATACAT+GGG | - | chr7.4:87322378-87322397 | None:intergenic | 25.0% |
| ! | ATTCTCTTTATCATTGGTAT+AGG | - | chr7.4:87321874-87321893 | None:intergenic | 25.0% |
| ! | CTCACAAAAATAATAGTTCA+AGG | - | chr7.4:87322461-87322480 | None:intergenic | 25.0% |
| ! | CTTATAAAATTTCATGGAGT+AGG | - | chr7.4:87322793-87322812 | None:intergenic | 25.0% |
| ! | GAGCAATAAAATATAATCCA+AGG | - | chr7.4:87323973-87323992 | None:intergenic | 25.0% |
| ! | GGATAAAAAAAACTAAGTTG+TGG | + | chr7.4:87323632-87323651 | MS.gene97597:intron | 25.0% |
| ! | TAAATTGACTACATCAATCA+AGG | - | chr7.4:87322331-87322350 | None:intergenic | 25.0% |
| ! | TAATATTAGGTTTCTGCTAT+CGG | - | chr7.4:87322603-87322622 | None:intergenic | 25.0% |
| ! | TATCATTGTCATCTATTTGT+GGG | - | chr7.4:87321917-87321936 | None:intergenic | 25.0% |
| ! | TGAAAATGGTGATTCTTATT+TGG | + | chr7.4:87322238-87322257 | MS.gene97597:CDS | 25.0% |
| ! | TTCAATGCCTAAATGAAATT+TGG | - | chr7.4:87323466-87323485 | None:intergenic | 25.0% |
| ! | TTGACAAAATATTTACCAGA+TGG | - | chr7.4:87322215-87322234 | None:intergenic | 25.0% |
| !! | GAAAATGGTGATTCTTATTT+GGG | + | chr7.4:87322239-87322258 | MS.gene97597:CDS | 25.0% |
| !! | GGATTATATTTTATTGCTCT+AGG | + | chr7.4:87323974-87323993 | MS.gene97597:intron | 25.0% |
| !! | TATTTTCAATTACTTGTGGA+AGG | - | chr7.4:87323352-87323371 | None:intergenic | 25.0% |
| !!! | ACACCCTCTAATATTTTAAA+AGG | + | chr7.4:87323736-87323755 | MS.gene97597:intron | 25.0% |
| !!! | TAACTTTGAAGCAATTTCAA+AGG | - | chr7.4:87322063-87322082 | None:intergenic | 25.0% |
| AAGCAATTATTGATCCAGAA+GGG | + | chr7.4:87323087-87323106 | MS.gene97597:CDS | 30.0% | |
| AAGGAAAGTTCACATAATGA+TGG | + | chr7.4:87322026-87322045 | MS.gene97597:CDS | 30.0% | |
| AATATTAGGTTTCTGCTATC+GGG | - | chr7.4:87322602-87322621 | None:intergenic | 30.0% | |
| AGAATCCTTGAAAAATACCA+AGG | + | chr7.4:87323224-87323243 | MS.gene97597:CDS | 30.0% | |
| AGCAGAAACCTAATATTAGA+TGG | + | chr7.4:87322605-87322624 | MS.gene97597:intron | 30.0% | |
| ATCATTGTCATCTATTTGTG+GGG | - | chr7.4:87321916-87321935 | None:intergenic | 30.0% | |
| ATTTGAGGGAATATCAACTT+TGG | + | chr7.4:87323247-87323266 | MS.gene97597:CDS | 30.0% | |
| CAAGTTATAACTAAATCGTG+CGG | + | chr7.4:87323611-87323630 | MS.gene97597:intron | 30.0% | |
| CACATGATTCTCTTTATCAT+TGG | - | chr7.4:87321880-87321899 | None:intergenic | 30.0% | |
| CTCTAAATACCCATCAATAA+AGG | + | chr7.4:87323313-87323332 | MS.gene97597:CDS | 30.0% | |
| GAAAAATACCAAGGATTTGA+GGG | + | chr7.4:87323233-87323252 | MS.gene97597:CDS | 30.0% | |
| GAATTCAAGGCTAAAAAACA+AGG | - | chr7.4:87322965-87322984 | None:intergenic | 30.0% | |
| GTATCATTGTCATCTATTTG+TGG | - | chr7.4:87321918-87321937 | None:intergenic | 30.0% | |
| TATATCAACAAGCTATTAGC+AGG | - | chr7.4:87323025-87323044 | None:intergenic | 30.0% | |
| TGAAAAATACCAAGGATTTG+AGG | + | chr7.4:87323232-87323251 | MS.gene97597:CDS | 30.0% | |
| ! | ACTTTTCATCTGACCAATTA+TGG | - | chr7.4:87324007-87324026 | None:intergenic | 30.0% |
| ! | ATATCAACTTTGGTTGATGT+AGG | + | chr7.4:87323257-87323276 | MS.gene97597:CDS | 30.0% |
| ! | CAAATCCTTGGTATTTTTCA+AGG | - | chr7.4:87323232-87323251 | None:intergenic | 30.0% |
| ! | GGTGTATTTTCAATTACTTG+TGG | - | chr7.4:87323356-87323375 | None:intergenic | 30.0% |
| ! | TATCAACTTTGGTTGATGTA+GGG | + | chr7.4:87323258-87323277 | MS.gene97597:CDS | 30.0% |
| !! | CATTTAGGCATTGAATATGT+TGG | + | chr7.4:87323471-87323490 | MS.gene97597:intron | 30.0% |
| !!! | AAGTTTTGAATTCAACAGAC+AGG | + | chr7.4:87322830-87322849 | MS.gene97597:intron | 30.0% |
| !!! | TTCCATGAACTTTTTTGAAC+AGG | - | chr7.4:87323115-87323134 | None:intergenic | 30.0% |
| AACACTCTGATTTACCGAAT+AGG | + | chr7.4:87322090-87322109 | MS.gene97597:CDS | 35.0% | |
| AACATGTCGTCAAGAATTCA+AGG | - | chr7.4:87322978-87322997 | None:intergenic | 35.0% | |
| AACCAACAAATGTATCTCGA+TGG | + | chr7.4:87324114-87324133 | MS.gene97597:CDS | 35.0% | |
| AAGGCTAAAAAACAAGGTCA+TGG | - | chr7.4:87322959-87322978 | None:intergenic | 35.0% | |
| AGCAATTATTGATCCAGAAG+GGG | + | chr7.4:87323088-87323107 | MS.gene97597:CDS | 35.0% | |
| AGGAGATGTCATAATGATCA+AGG | + | chr7.4:87323521-87323540 | MS.gene97597:CDS | 35.0% | |
| ATCAAGGTATGTGTGTGTAT+GGG | + | chr7.4:87323537-87323556 | MS.gene97597:intron | 35.0% | |
| ATCATTATGACATCTCCTTG+TGG | - | chr7.4:87323519-87323538 | None:intergenic | 35.0% | |
| ATGAGAATGAGCTTTCCATT+TGG | - | chr7.4:87324068-87324087 | None:intergenic | 35.0% | |
| CCTAATATTAGATGGTCCAA+CGG | + | chr7.4:87322613-87322632 | MS.gene97597:intron | 35.0% | |
| GAAGCAATTATTGATCCAGA+AGG | + | chr7.4:87323086-87323105 | MS.gene97597:CDS | 35.0% | |
| GACCTGTTCAAAAAAGTTCA+TGG | + | chr7.4:87323110-87323129 | MS.gene97597:CDS | 35.0% | |
| GTAGCATAGTGAGAGTTTAT+GGG | + | chr7.4:87322183-87322202 | MS.gene97597:CDS | 35.0% | |
| GTGAAGGAATATGAGAGTTT+GGG | + | chr7.4:87324191-87324210 | MS.gene97597:CDS | 35.0% | |
| TAGCCGCTAAGTTTGAATAT+GGG | + | chr7.4:87322896-87322915 | MS.gene97597:intron | 35.0% | |
| TCACCCATATTCAAACTTAG+CGG | - | chr7.4:87322902-87322921 | None:intergenic | 35.0% | |
| TGTCTTGCTTTCTCTATCAT+TGG | + | chr7.4:87324248-87324267 | MS.gene97597:CDS | 35.0% | |
| TGTGAAGGAATATGAGAGTT+TGG | + | chr7.4:87324190-87324209 | MS.gene97597:CDS | 35.0% | |
| TTGATATTCCCTCAAATCCT+TGG | - | chr7.4:87323244-87323263 | None:intergenic | 35.0% | |
| TTTCTCTATCATTGGAGTGA+TGG | + | chr7.4:87324256-87324275 | MS.gene97597:CDS | 35.0% | |
| TTTGTTAAAGAGTCTCGCAT+CGG | - | chr7.4:87322738-87322757 | None:intergenic | 35.0% | |
| ! | ATCAACTTTGGTTGATGTAG+GGG | + | chr7.4:87323259-87323278 | MS.gene97597:CDS | 35.0% |
| !! | ATGTTTGAAAGTGTTCCACA+AGG | + | chr7.4:87323501-87323520 | MS.gene97597:CDS | 35.0% |
| !! | CCAACGGATTTTAGAAATCA+TGG | + | chr7.4:87322629-87322648 | MS.gene97597:intron | 35.0% |
| !! | CCATGATTTCTAAAATCCGT+TGG | - | chr7.4:87322632-87322651 | None:intergenic | 35.0% |
| !! | TTAGGCATTGAATATGTTGG+AGG | + | chr7.4:87323474-87323493 | MS.gene97597:intron | 35.0% |
| !! | TTTGTTGGTTCTAGATCTTC+TGG | - | chr7.4:87324104-87324123 | None:intergenic | 35.0% |
| AACATACGATCGAGCCTATT+CGG | - | chr7.4:87322107-87322126 | None:intergenic | 40.0% | |
| AACATGATGTTTGTCACAGC+TGG | + | chr7.4:87324152-87324171 | MS.gene97597:CDS | 40.0% | |
| AGAATGAGCTTTCCATTTGG+TGG | - | chr7.4:87324065-87324084 | None:intergenic | 40.0% | |
| AGCCATCGAGATACATTTGT+TGG | - | chr7.4:87324119-87324138 | None:intergenic | 40.0% | |
| CAATGATACACTCTCTGCTA+TGG | + | chr7.4:87321929-87321948 | MS.gene97597:CDS | 40.0% | |
| CACTATGCTACCATCATCAT+TGG | - | chr7.4:87322174-87322193 | None:intergenic | 40.0% | |
| CCGTTGGACCATCTAATATT+AGG | - | chr7.4:87322616-87322635 | None:intergenic | 40.0% | |
| CTCGGACATGAGTTTATAAG+TGG | - | chr7.4:87322704-87322723 | None:intergenic | 40.0% | |
| GATCAAGGTATGTGTGTGTA+TGG | + | chr7.4:87323536-87323555 | MS.gene97597:intron | 40.0% | |
| GGACATGAGTTTATAAGTGG+AGG | - | chr7.4:87322701-87322720 | None:intergenic | 40.0% | |
| GGTAGCATAGTGAGAGTTTA+TGG | + | chr7.4:87322182-87322201 | MS.gene97597:CDS | 40.0% | |
| GTAGCCGCTAAGTTTGAATA+TGG | + | chr7.4:87322895-87322914 | MS.gene97597:intron | 40.0% | |
| TACAAAGCTTTGCCACCAAA+TGG | + | chr7.4:87324050-87324069 | MS.gene97597:CDS | 40.0% | |
| ! | TCAACTTTGGTTGATGTAGG+GGG | + | chr7.4:87323260-87323279 | MS.gene97597:CDS | 40.0% |
| ! | TCTAGATCTTCTGGTTGCAA+GGG | - | chr7.4:87324095-87324114 | None:intergenic | 40.0% |
| ! | TGGAATGGAAAGAAGTGTGA+AGG | + | chr7.4:87324175-87324194 | MS.gene97597:CDS | 40.0% |
| ! | TTCTAGATCTTCTGGTTGCA+AGG | - | chr7.4:87324096-87324115 | None:intergenic | 40.0% |
| !! | AGAAATGGATTACCTGGACA+AGG | - | chr7.4:87323380-87323399 | None:intergenic | 40.0% |
| !! | CACATGAGAAATGGATTACC+TGG | - | chr7.4:87323386-87323405 | None:intergenic | 40.0% |
| !! | CTCTTCTGTCTGTTTCTACT+CGG | + | chr7.4:87322147-87322166 | MS.gene97597:CDS | 40.0% |
| !! | GGTAAATCAGAGTGTTGAGT+TGG | - | chr7.4:87322086-87322105 | None:intergenic | 40.0% |
| !! | TATGGTACTTGGTGCCAATA+TGG | + | chr7.4:87321947-87321966 | MS.gene97597:CDS | 40.0% |
| AACCGCAGGAAACACCATAT+TGG | - | chr7.4:87321964-87321983 | None:intergenic | 45.0% | |
| ACACTCTCTGCTATGGTACT+TGG | + | chr7.4:87321936-87321955 | MS.gene97597:CDS | 45.0% | |
| ACCACACCATTGACAAAGCA+GGG | - | chr7.4:87322289-87322308 | None:intergenic | 45.0% | |
| ATGATGTTTGTCACAGCTGG+TGG | + | chr7.4:87324155-87324174 | MS.gene97597:CDS | 45.0% | |
| GAAAATACACCACCTTGTCC+AGG | + | chr7.4:87323365-87323384 | MS.gene97597:CDS | 45.0% | |
| GAGAGTTTGGGAAAACGATC+TGG | + | chr7.4:87324203-87324222 | MS.gene97597:CDS | 45.0% | |
| GTAATCCTCACCTCACAAGT+CGG | - | chr7.4:87322679-87322698 | None:intergenic | 45.0% | |
| GTTTATGGGATCACACCATC+TGG | + | chr7.4:87322197-87322216 | MS.gene97597:CDS | 45.0% | |
| TACCACACCATTGACAAAGC+AGG | - | chr7.4:87322290-87322309 | None:intergenic | 45.0% | |
| TCTACTCGGACCAATGATGA+TGG | + | chr7.4:87322161-87322180 | MS.gene97597:CDS | 45.0% | |
| TCTAGGCTGTCAGCCATAAT+TGG | + | chr7.4:87323991-87324010 | MS.gene97597:intron | 45.0% | |
| TGCCAATATGGTGTTTCCTG+CGG | + | chr7.4:87321959-87321978 | MS.gene97597:CDS | 45.0% | |
| ! | TTTTTGAACAGGTCCCCTTC+TGG | - | chr7.4:87323104-87323123 | None:intergenic | 45.0% |
| !! | AATGGATTACCTGGACAAGG+TGG | - | chr7.4:87323377-87323396 | None:intergenic | 45.0% |
| !! | AATAATATTGTAAATTAAAT+TGG | - | chr7.4:87323431-87323450 | None:intergenic | 5.0% |
| ACCCTGCTTTGTCAATGGTG+TGG | + | chr7.4:87322285-87322304 | MS.gene97597:CDS | 50.0% | |
| ATTGCAGCGTTAAGAACCGC+AGG | - | chr7.4:87321978-87321997 | None:intergenic | 50.0% | |
| GCATCGGATCAAAGATGGCT+CGG | - | chr7.4:87322722-87322741 | None:intergenic | 50.0% | |
| GTCTCACCCTGCTTTGTCAA+TGG | + | chr7.4:87322280-87322299 | MS.gene97597:CDS | 50.0% | |
| GTCTCGCATCGGATCAAAGA+TGG | - | chr7.4:87322727-87322746 | None:intergenic | 50.0% | |
| GTTTGTCACAGCTGGTGGAA+TGG | + | chr7.4:87324160-87324179 | MS.gene97597:CDS | 50.0% | |
| ! | ACCTCACAAGTCGGTTTCGT+GGG | - | chr7.4:87322670-87322689 | None:intergenic | 50.0% |
| ! | ACTTTGGTTGATGTAGGGGG+TGG | + | chr7.4:87323263-87323282 | MS.gene97597:CDS | 50.0% |
| GTTGATGTAGGGGGTGGAAC+AGG | + | chr7.4:87323269-87323288 | MS.gene97597:CDS | 55.0% | |
| ! | CACCTCACAAGTCGGTTTCG+TGG | - | chr7.4:87322671-87322690 | None:intergenic | 55.0% |
| ! | CCTCACAAGTCGGTTTCGTG+GGG | - | chr7.4:87322669-87322688 | None:intergenic | 55.0% |
| !! | CGAAACCGACTTGTGAGGTG+AGG | + | chr7.4:87322671-87322690 | MS.gene97597:intron | 55.0% |
| !! | CCCCACGAAACCGACTTGTG+AGG | + | chr7.4:87322666-87322685 | MS.gene97597:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 87321867 | 87324292 | 87321867 | ID=MS.gene97597 |
| chr7.4 | mRNA | 87321867 | 87324292 | 87321867 | ID=MS.gene97597.t1;Parent=MS.gene97597 |
| chr7.4 | exon | 87321867 | 87322306 | 87321867 | ID=MS.gene97597.t1.exon1;Parent=MS.gene97597.t1 |
| chr7.4 | CDS | 87321867 | 87322306 | 87321867 | ID=cds.MS.gene97597.t1;Parent=MS.gene97597.t1 |
| chr7.4 | exon | 87323073 | 87323386 | 87323073 | ID=MS.gene97597.t1.exon2;Parent=MS.gene97597.t1 |
| chr7.4 | CDS | 87323073 | 87323386 | 87323073 | ID=cds.MS.gene97597.t1;Parent=MS.gene97597.t1 |
| chr7.4 | exon | 87323478 | 87323542 | 87323478 | ID=MS.gene97597.t1.exon3;Parent=MS.gene97597.t1 |
| chr7.4 | CDS | 87323478 | 87323542 | 87323478 | ID=cds.MS.gene97597.t1;Parent=MS.gene97597.t1 |
| chr7.4 | exon | 87323996 | 87324292 | 87323996 | ID=MS.gene97597.t1.exon4;Parent=MS.gene97597.t1 |
| chr7.4 | CDS | 87323996 | 87324292 | 87323996 | ID=cds.MS.gene97597.t1;Parent=MS.gene97597.t1 |
| Gene Sequence |
| Protein sequence |
