Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97857.t1 | XP_003621048.1 | 96.8 | 218 | 7 | 0 | 1 | 218 | 419 | 636 | 4.70E-116 | 427.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97857.t1 | Q9LYR6 | 77.8 | 194 | 41 | 1 | 1 | 194 | 420 | 611 | 3.1e-84 | 312.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97857.t1 | G7KXR0 | 96.8 | 218 | 7 | 0 | 1 | 218 | 419 | 636 | 3.4e-116 | 427.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene97857 | 0.813878 | 2.05E-51 | -1.69E-46 |
| MS.gene049756 | MS.gene97857 | 0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene97857 | 0.822644 | 2.12E-53 | -1.69E-46 |
| MS.gene050330 | MS.gene97857 | -0.808986 | 2.36E-50 | -1.69E-46 |
| MS.gene050586 | MS.gene97857 | 0.827336 | 1.65E-54 | -1.69E-46 |
| MS.gene050807 | MS.gene97857 | 0.802986 | 4.32E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene97857 | 0.843228 | 1.59E-58 | -1.69E-46 |
| MS.gene051663 | MS.gene97857 | 0.800443 | 1.44E-48 | -1.69E-46 |
| MS.gene051789 | MS.gene97857 | 0.86468 | 1.02E-64 | -1.69E-46 |
| MS.gene052176 | MS.gene97857 | 0.801427 | 9.05E-49 | -1.69E-46 |
| MS.gene052256 | MS.gene97857 | 0.81573 | 7.96E-52 | -1.69E-46 |
| MS.gene052302 | MS.gene97857 | 0.831614 | 1.51E-55 | -1.69E-46 |
| MS.gene052376 | MS.gene97857 | 0.82796 | 1.17E-54 | -1.69E-46 |
| MS.gene052856 | MS.gene97857 | 0.830328 | 3.12E-55 | -1.69E-46 |
| MS.gene052858 | MS.gene97857 | 0.809166 | 2.16E-50 | -1.69E-46 |
| MS.gene052967 | MS.gene97857 | 0.821115 | 4.79E-53 | -1.69E-46 |
| MS.gene053074 | MS.gene97857 | 0.823401 | 1.41E-53 | -1.69E-46 |
| MS.gene053630 | MS.gene97857 | 0.812228 | 4.71E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene97857 | 0.813851 | 2.08E-51 | -1.69E-46 |
| MS.gene054184 | MS.gene97857 | 0.821707 | 3.50E-53 | -1.69E-46 |
| MS.gene054185 | MS.gene97857 | 0.830763 | 2.45E-55 | -1.69E-46 |
| MS.gene054942 | MS.gene97857 | 0.817742 | 2.82E-52 | -1.69E-46 |
| MS.gene055133 | MS.gene97857 | 0.817449 | 3.28E-52 | -1.69E-46 |
| MS.gene055207 | MS.gene97857 | 0.814324 | 1.63E-51 | -1.69E-46 |
| MS.gene056069 | MS.gene97857 | -0.842909 | 1.94E-58 | -1.69E-46 |
| MS.gene056760 | MS.gene97857 | 0.803989 | 2.68E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene97857 | 0.811968 | 5.37E-51 | -1.69E-46 |
| MS.gene058168 | MS.gene97857 | 0.809263 | 2.06E-50 | -1.69E-46 |
| MS.gene058182 | MS.gene97857 | 0.838024 | 3.68E-57 | -1.69E-46 |
| MS.gene058906 | MS.gene97857 | 0.829284 | 5.61E-55 | -1.69E-46 |
| MS.gene059006 | MS.gene97857 | 0.810791 | 9.67E-51 | -1.69E-46 |
| MS.gene06001 | MS.gene97857 | 0.809815 | 1.57E-50 | -1.69E-46 |
| MS.gene060165 | MS.gene97857 | 0.807651 | 4.56E-50 | -1.69E-46 |
| MS.gene060320 | MS.gene97857 | 0.815757 | 7.85E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene97857 | 0.854197 | 1.45E-61 | -1.69E-46 |
| MS.gene060619 | MS.gene97857 | 0.812159 | 4.88E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97857.t1 | MTR_7g006540 | 96.789 | 218 | 7 | 0 | 1 | 218 | 419 | 636 | 7.10e-154 | 441 |
| MS.gene97857.t1 | MTR_3g112470 | 38.571 | 210 | 114 | 3 | 1 | 209 | 372 | 567 | 2.53e-43 | 153 |
| MS.gene97857.t1 | MTR_7g067010 | 41.753 | 194 | 108 | 2 | 1 | 194 | 373 | 561 | 3.58e-43 | 152 |
| MS.gene97857.t1 | MTR_3g112460 | 37.441 | 211 | 112 | 4 | 1 | 205 | 372 | 568 | 5.03e-42 | 149 |
| MS.gene97857.t1 | MTR_4g015080 | 41.237 | 194 | 109 | 2 | 1 | 194 | 383 | 571 | 4.28e-41 | 147 |
| MS.gene97857.t1 | MTR_4g033310 | 41.146 | 192 | 102 | 4 | 6 | 193 | 302 | 486 | 4.95e-40 | 143 |
| MS.gene97857.t1 | MTR_7g111260 | 36.548 | 197 | 116 | 2 | 1 | 196 | 360 | 548 | 5.24e-40 | 144 |
| MS.gene97857.t1 | MTR_4g033315 | 41.146 | 192 | 102 | 4 | 6 | 193 | 366 | 550 | 1.12e-39 | 143 |
| MS.gene97857.t1 | MTR_4g033310 | 41.146 | 192 | 102 | 4 | 6 | 193 | 366 | 550 | 1.12e-39 | 143 |
| MS.gene97857.t1 | MTR_1g085090 | 36.869 | 198 | 116 | 2 | 1 | 197 | 360 | 549 | 2.47e-39 | 142 |
| MS.gene97857.t1 | MTR_8g038880 | 36.500 | 200 | 119 | 3 | 6 | 203 | 366 | 559 | 4.19e-39 | 142 |
| MS.gene97857.t1 | MTR_3g112450 | 38.278 | 209 | 113 | 4 | 3 | 209 | 375 | 569 | 1.18e-38 | 140 |
| MS.gene97857.t1 | MTR_3g072300 | 39.487 | 195 | 110 | 4 | 4 | 196 | 375 | 563 | 1.04e-37 | 138 |
| MS.gene97857.t1 | MTR_3g069420 | 38.384 | 198 | 116 | 3 | 13 | 208 | 392 | 585 | 1.38e-37 | 137 |
| MS.gene97857.t1 | MTR_3g462710 | 36.082 | 194 | 119 | 2 | 1 | 194 | 266 | 454 | 1.60e-37 | 136 |
| MS.gene97857.t1 | MTR_3g014790 | 35.323 | 201 | 120 | 3 | 4 | 200 | 359 | 553 | 2.27e-37 | 137 |
| MS.gene97857.t1 | MTR_4g033325 | 38.860 | 193 | 115 | 2 | 6 | 198 | 240 | 429 | 2.84e-37 | 135 |
| MS.gene97857.t1 | MTR_4g033325 | 38.860 | 193 | 115 | 2 | 6 | 198 | 266 | 455 | 3.70e-37 | 135 |
| MS.gene97857.t1 | MTR_4g123537 | 32.883 | 222 | 138 | 3 | 1 | 219 | 384 | 597 | 5.62e-37 | 136 |
| MS.gene97857.t1 | MTR_3g100980 | 39.796 | 196 | 108 | 4 | 1 | 195 | 365 | 551 | 5.98e-37 | 135 |
| MS.gene97857.t1 | MTR_3g100980 | 39.796 | 196 | 108 | 4 | 1 | 195 | 393 | 579 | 7.25e-37 | 135 |
| MS.gene97857.t1 | MTR_3g462710 | 36.082 | 194 | 119 | 2 | 1 | 194 | 375 | 563 | 7.74e-37 | 135 |
| MS.gene97857.t1 | MTR_5g085850 | 37.173 | 191 | 105 | 3 | 7 | 197 | 384 | 559 | 7.88e-37 | 135 |
| MS.gene97857.t1 | MTR_0294s0020 | 37.500 | 192 | 117 | 2 | 7 | 198 | 365 | 553 | 1.10e-36 | 135 |
| MS.gene97857.t1 | MTR_4g033325 | 38.860 | 193 | 115 | 2 | 6 | 198 | 364 | 553 | 1.13e-36 | 135 |
| MS.gene97857.t1 | MTR_4g033385 | 37.949 | 195 | 114 | 3 | 6 | 198 | 267 | 456 | 1.47e-36 | 133 |
| MS.gene97857.t1 | MTR_2g017750 | 35.678 | 199 | 122 | 4 | 1 | 196 | 395 | 590 | 2.10e-36 | 134 |
| MS.gene97857.t1 | MTR_8g103233 | 41.622 | 185 | 105 | 2 | 7 | 191 | 372 | 553 | 3.06e-36 | 134 |
| MS.gene97857.t1 | MTR_8g469470 | 35.979 | 189 | 115 | 3 | 7 | 195 | 400 | 582 | 1.53e-35 | 132 |
| MS.gene97857.t1 | MTR_3g069440 | 33.684 | 190 | 122 | 2 | 6 | 195 | 384 | 569 | 1.55e-35 | 132 |
| MS.gene97857.t1 | MTR_8g469310 | 36.410 | 195 | 120 | 3 | 1 | 194 | 380 | 571 | 1.05e-34 | 129 |
| MS.gene97857.t1 | MTR_5g038380 | 36.410 | 195 | 116 | 4 | 1 | 194 | 387 | 574 | 1.73e-34 | 129 |
| MS.gene97857.t1 | MTR_3g069500 | 31.579 | 190 | 116 | 2 | 6 | 195 | 386 | 561 | 3.00e-33 | 125 |
| MS.gene97857.t1 | MTR_7g088825 | 33.937 | 221 | 139 | 4 | 1 | 220 | 376 | 590 | 5.68e-33 | 125 |
| MS.gene97857.t1 | MTR_3g005010 | 35.385 | 195 | 115 | 3 | 4 | 194 | 356 | 543 | 7.25e-33 | 124 |
| MS.gene97857.t1 | MTR_7g088790 | 33.846 | 195 | 123 | 3 | 1 | 194 | 383 | 572 | 8.15e-33 | 124 |
| MS.gene97857.t1 | MTR_7g098200 | 33.010 | 206 | 134 | 2 | 14 | 219 | 277 | 478 | 8.43e-33 | 123 |
| MS.gene97857.t1 | MTR_4g033330 | 39.655 | 174 | 94 | 4 | 7 | 176 | 367 | 533 | 1.22e-32 | 124 |
| MS.gene97857.t1 | MTR_7g098200 | 32.864 | 213 | 137 | 3 | 9 | 219 | 384 | 592 | 2.77e-32 | 123 |
| MS.gene97857.t1 | MTR_7g098230 | 33.175 | 211 | 131 | 5 | 7 | 215 | 379 | 581 | 2.83e-32 | 123 |
| MS.gene97857.t1 | MTR_7g098200 | 33.171 | 205 | 133 | 2 | 15 | 219 | 382 | 582 | 2.93e-32 | 123 |
| MS.gene97857.t1 | MTR_7g098040 | 35.047 | 214 | 126 | 6 | 7 | 213 | 387 | 594 | 3.12e-32 | 123 |
| MS.gene97857.t1 | MTR_4g107530 | 37.089 | 213 | 118 | 5 | 3 | 209 | 391 | 593 | 7.45e-32 | 122 |
| MS.gene97857.t1 | MTR_4g011280 | 34.123 | 211 | 132 | 3 | 8 | 214 | 389 | 596 | 3.08e-31 | 120 |
| MS.gene97857.t1 | MTR_8g087780 | 40.704 | 199 | 113 | 4 | 1 | 196 | 380 | 576 | 3.26e-31 | 120 |
| MS.gene97857.t1 | MTR_4g107670 | 34.010 | 197 | 125 | 4 | 1 | 196 | 381 | 573 | 3.27e-31 | 120 |
| MS.gene97857.t1 | MTR_8g469480 | 35.052 | 194 | 120 | 3 | 1 | 194 | 397 | 584 | 3.70e-31 | 120 |
| MS.gene97857.t1 | MTR_2g101590 | 34.826 | 201 | 125 | 3 | 16 | 216 | 393 | 587 | 4.26e-31 | 120 |
| MS.gene97857.t1 | MTR_2g101610 | 34.826 | 201 | 125 | 3 | 16 | 216 | 394 | 588 | 4.49e-31 | 120 |
| MS.gene97857.t1 | MTR_4g107510 | 36.946 | 203 | 105 | 6 | 3 | 194 | 394 | 584 | 6.22e-31 | 119 |
| MS.gene97857.t1 | MTR_5g038060 | 36.413 | 184 | 111 | 3 | 11 | 194 | 400 | 577 | 8.28e-31 | 119 |
| MS.gene97857.t1 | MTR_8g087810 | 40.212 | 189 | 108 | 4 | 11 | 196 | 391 | 577 | 9.31e-31 | 119 |
| MS.gene97857.t1 | MTR_4g019580 | 31.915 | 188 | 120 | 2 | 7 | 194 | 390 | 569 | 9.54e-31 | 119 |
| MS.gene97857.t1 | MTR_5g038190 | 30.846 | 201 | 127 | 4 | 7 | 205 | 387 | 577 | 1.09e-30 | 118 |
| MS.gene97857.t1 | MTR_2g101650 | 36.649 | 191 | 114 | 3 | 3 | 191 | 378 | 563 | 1.18e-30 | 118 |
| MS.gene97857.t1 | MTR_5g012270 | 32.124 | 193 | 126 | 2 | 8 | 200 | 391 | 578 | 1.23e-30 | 118 |
| MS.gene97857.t1 | MTR_7g065080 | 31.746 | 189 | 115 | 2 | 6 | 194 | 297 | 471 | 1.63e-30 | 117 |
| MS.gene97857.t1 | MTR_2g101560 | 36.082 | 194 | 112 | 4 | 16 | 203 | 394 | 581 | 1.65e-30 | 118 |
| MS.gene97857.t1 | MTR_7g065080 | 32.804 | 189 | 113 | 3 | 6 | 194 | 384 | 558 | 2.65e-30 | 117 |
| MS.gene97857.t1 | MTR_7g013270 | 36.269 | 193 | 112 | 4 | 1 | 192 | 442 | 624 | 2.67e-30 | 117 |
| MS.gene97857.t1 | MTR_7g088820 | 30.455 | 220 | 140 | 5 | 1 | 212 | 269 | 483 | 3.22e-30 | 116 |
| MS.gene97857.t1 | MTR_7g098180 | 36.022 | 186 | 113 | 3 | 9 | 193 | 389 | 569 | 4.02e-30 | 117 |
| MS.gene97857.t1 | MTR_4g107580 | 31.416 | 226 | 137 | 6 | 3 | 219 | 383 | 599 | 4.20e-30 | 117 |
| MS.gene97857.t1 | MTR_7g098160 | 32.710 | 214 | 137 | 5 | 8 | 219 | 387 | 595 | 4.25e-30 | 117 |
| MS.gene97857.t1 | MTR_7g088820 | 30.455 | 220 | 140 | 5 | 1 | 212 | 317 | 531 | 5.18e-30 | 116 |
| MS.gene97857.t1 | MTR_7g088820 | 30.455 | 220 | 140 | 5 | 1 | 212 | 379 | 593 | 5.91e-30 | 116 |
| MS.gene97857.t1 | MTR_7g010820 | 35.468 | 203 | 130 | 1 | 1 | 203 | 379 | 580 | 8.48e-30 | 116 |
| MS.gene97857.t1 | MTR_7g098090 | 33.168 | 202 | 129 | 4 | 8 | 207 | 392 | 589 | 1.66e-29 | 115 |
| MS.gene97857.t1 | MTR_5g055000 | 32.727 | 220 | 139 | 5 | 1 | 216 | 369 | 583 | 1.97e-29 | 115 |
| MS.gene97857.t1 | MTR_1g026740 | 39.791 | 191 | 112 | 2 | 1 | 191 | 366 | 553 | 2.05e-29 | 115 |
| MS.gene97857.t1 | MTR_1g075440 | 32.394 | 213 | 133 | 4 | 1 | 212 | 377 | 579 | 2.25e-29 | 115 |
| MS.gene97857.t1 | MTR_5g012290 | 30.622 | 209 | 139 | 3 | 1 | 209 | 382 | 584 | 4.83e-29 | 114 |
| MS.gene97857.t1 | MTR_2g005130 | 34.375 | 192 | 113 | 4 | 5 | 194 | 383 | 563 | 7.31e-29 | 113 |
| MS.gene97857.t1 | MTR_7g005930 | 32.812 | 192 | 120 | 2 | 1 | 192 | 385 | 567 | 8.52e-29 | 113 |
| MS.gene97857.t1 | MTR_1g116930 | 33.333 | 192 | 119 | 2 | 1 | 192 | 373 | 555 | 1.00e-28 | 113 |
| MS.gene97857.t1 | MTR_7g098220 | 33.155 | 187 | 119 | 4 | 9 | 193 | 341 | 523 | 1.51e-28 | 112 |
| MS.gene97857.t1 | MTR_7g098220 | 33.155 | 187 | 119 | 4 | 9 | 193 | 385 | 567 | 1.77e-28 | 112 |
| MS.gene97857.t1 | MTR_4g024930 | 34.715 | 193 | 117 | 3 | 1 | 192 | 369 | 553 | 2.35e-28 | 112 |
| MS.gene97857.t1 | MTR_4g114340 | 35.567 | 194 | 118 | 3 | 1 | 194 | 373 | 559 | 3.53e-28 | 111 |
| MS.gene97857.t1 | MTR_2g101640 | 33.166 | 199 | 124 | 3 | 8 | 203 | 382 | 574 | 3.60e-28 | 111 |
| MS.gene97857.t1 | MTR_6g008690 | 31.414 | 191 | 126 | 3 | 7 | 196 | 352 | 538 | 2.49e-27 | 108 |
| MS.gene97857.t1 | MTR_1g026770 | 38.674 | 181 | 108 | 2 | 11 | 191 | 373 | 550 | 4.22e-26 | 105 |
| MS.gene97857.t1 | MTR_1g041835 | 35.052 | 194 | 120 | 3 | 4 | 196 | 378 | 566 | 1.42e-25 | 104 |
| MS.gene97857.t1 | MTR_1g042310 | 31.937 | 191 | 124 | 3 | 7 | 196 | 337 | 522 | 1.49e-25 | 103 |
| MS.gene97857.t1 | MTR_1g042310 | 31.937 | 191 | 124 | 3 | 7 | 196 | 344 | 529 | 1.53e-25 | 103 |
| MS.gene97857.t1 | MTR_1g042310 | 31.937 | 191 | 124 | 3 | 7 | 196 | 381 | 566 | 2.00e-25 | 103 |
| MS.gene97857.t1 | MTR_4g101380 | 31.343 | 201 | 132 | 3 | 8 | 208 | 392 | 586 | 2.65e-25 | 103 |
| MS.gene97857.t1 | MTR_5g014150 | 31.088 | 193 | 127 | 3 | 1 | 192 | 399 | 586 | 3.07e-25 | 103 |
| MS.gene97857.t1 | MTR_1g041815 | 34.536 | 194 | 121 | 3 | 4 | 196 | 378 | 566 | 3.38e-25 | 103 |
| MS.gene97857.t1 | MTR_1g026750 | 37.173 | 191 | 117 | 2 | 1 | 191 | 367 | 554 | 4.79e-25 | 102 |
| MS.gene97857.t1 | MTR_4g098800 | 31.606 | 193 | 121 | 3 | 1 | 192 | 391 | 573 | 5.52e-25 | 102 |
| MS.gene97857.t1 | MTR_4g098800 | 31.606 | 193 | 121 | 3 | 1 | 192 | 456 | 638 | 5.77e-25 | 102 |
| MS.gene97857.t1 | MTR_3g065350 | 39.669 | 121 | 65 | 1 | 1 | 121 | 43 | 155 | 6.57e-25 | 96.3 |
| MS.gene97857.t1 | MTR_1g041875 | 32.927 | 164 | 99 | 2 | 7 | 170 | 384 | 536 | 1.77e-24 | 100 |
| MS.gene97857.t1 | MTR_1g057460 | 31.522 | 184 | 115 | 2 | 8 | 191 | 392 | 564 | 1.86e-24 | 100 |
| MS.gene97857.t1 | MTR_1g057460 | 31.522 | 184 | 115 | 2 | 8 | 191 | 321 | 493 | 2.95e-24 | 100 |
| MS.gene97857.t1 | MTR_0236s0050 | 32.386 | 176 | 108 | 2 | 16 | 191 | 329 | 493 | 6.57e-24 | 99.4 |
| MS.gene97857.t1 | MTR_1g041885 | 31.638 | 177 | 110 | 2 | 1 | 177 | 331 | 496 | 2.25e-23 | 97.8 |
| MS.gene97857.t1 | MTR_1g009200 | 37.500 | 200 | 118 | 4 | 11 | 208 | 387 | 581 | 1.24e-22 | 95.9 |
| MS.gene97857.t1 | MTR_4g033375 | 39.394 | 132 | 79 | 1 | 6 | 137 | 368 | 498 | 7.26e-22 | 93.2 |
| MS.gene97857.t1 | MTR_4g033395 | 38.806 | 134 | 77 | 2 | 6 | 137 | 368 | 498 | 9.61e-21 | 90.1 |
| MS.gene97857.t1 | MTR_1g009170 | 35.366 | 164 | 97 | 2 | 10 | 173 | 203 | 357 | 3.76e-18 | 82.4 |
| MS.gene97857.t1 | MTR_4g107610 | 29.167 | 192 | 126 | 5 | 13 | 202 | 397 | 580 | 6.37e-18 | 82.0 |
| MS.gene97857.t1 | MTR_7g052600 | 31.282 | 195 | 114 | 5 | 5 | 191 | 343 | 525 | 2.75e-17 | 80.1 |
| MS.gene97857.t1 | MTR_7g051830 | 29.570 | 186 | 114 | 4 | 11 | 191 | 352 | 525 | 4.93e-17 | 79.3 |
| MS.gene97857.t1 | MTR_2g093180 | 27.660 | 188 | 116 | 4 | 7 | 194 | 381 | 548 | 1.35e-16 | 78.2 |
| MS.gene97857.t1 | MTR_7g064780 | 28.061 | 196 | 126 | 6 | 2 | 191 | 381 | 567 | 1.85e-16 | 77.8 |
| MS.gene97857.t1 | MTR_7g051880 | 29.570 | 186 | 114 | 4 | 11 | 191 | 352 | 525 | 5.38e-16 | 76.6 |
| MS.gene97857.t1 | MTR_2g093640 | 25.532 | 188 | 120 | 4 | 7 | 194 | 380 | 547 | 7.64e-16 | 75.9 |
| MS.gene97857.t1 | MTR_7g098210 | 26.738 | 187 | 116 | 4 | 9 | 193 | 274 | 441 | 2.89e-15 | 74.3 |
| MS.gene97857.t1 | MTR_4g033390 | 35.870 | 92 | 57 | 1 | 107 | 198 | 30 | 119 | 3.35e-15 | 69.7 |
| MS.gene97857.t1 | MTR_2g093160 | 28.481 | 158 | 96 | 2 | 37 | 194 | 407 | 547 | 6.35e-15 | 73.6 |
| MS.gene97857.t1 | MTR_7g064800 | 28.272 | 191 | 126 | 4 | 1 | 189 | 386 | 567 | 6.41e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97857.t1 | AT5G13400 | 77.835 | 194 | 41 | 1 | 1 | 194 | 420 | 611 | 1.04e-107 | 323 |
| MS.gene97857.t1 | AT5G01180 | 39.691 | 194 | 112 | 2 | 1 | 194 | 375 | 563 | 2.05e-40 | 145 |
| MS.gene97857.t1 | AT5G01180 | 39.691 | 194 | 112 | 2 | 1 | 194 | 375 | 563 | 2.05e-40 | 145 |
| MS.gene97857.t1 | AT5G01180 | 39.691 | 194 | 112 | 2 | 1 | 194 | 375 | 563 | 2.05e-40 | 145 |
| MS.gene97857.t1 | AT2G02040 | 42.188 | 192 | 107 | 3 | 3 | 194 | 394 | 581 | 5.80e-39 | 141 |
| MS.gene97857.t1 | AT3G54140 | 37.629 | 194 | 116 | 2 | 1 | 194 | 375 | 563 | 1.79e-37 | 137 |
| MS.gene97857.t1 | AT3G54140 | 37.629 | 194 | 116 | 2 | 1 | 194 | 375 | 563 | 1.79e-37 | 137 |
| MS.gene97857.t1 | AT3G54450 | 35.450 | 189 | 118 | 2 | 6 | 194 | 358 | 542 | 7.07e-37 | 135 |
| MS.gene97857.t1 | AT3G53960 | 35.233 | 193 | 112 | 4 | 6 | 195 | 392 | 574 | 2.52e-36 | 134 |
| MS.gene97857.t1 | AT1G69870 | 34.597 | 211 | 130 | 4 | 7 | 217 | 413 | 615 | 5.11e-36 | 134 |
| MS.gene97857.t1 | AT1G62200 | 40.110 | 182 | 97 | 3 | 3 | 184 | 408 | 577 | 1.41e-35 | 132 |
| MS.gene97857.t1 | AT1G62200 | 40.110 | 182 | 97 | 3 | 3 | 184 | 451 | 620 | 1.82e-35 | 132 |
| MS.gene97857.t1 | AT1G62200 | 40.110 | 182 | 97 | 3 | 3 | 184 | 437 | 606 | 1.87e-35 | 132 |
| MS.gene97857.t1 | AT2G02020 | 38.860 | 193 | 108 | 4 | 3 | 193 | 337 | 521 | 5.02e-35 | 130 |
| MS.gene97857.t1 | AT2G02020 | 38.860 | 193 | 108 | 4 | 3 | 193 | 358 | 542 | 5.08e-35 | 130 |
| MS.gene97857.t1 | AT2G40460 | 36.082 | 194 | 120 | 3 | 4 | 197 | 369 | 558 | 6.80e-35 | 130 |
| MS.gene97857.t1 | AT1G22550 | 37.037 | 189 | 116 | 2 | 6 | 194 | 374 | 559 | 4.16e-34 | 128 |
| MS.gene97857.t1 | AT1G72140 | 37.949 | 195 | 118 | 2 | 1 | 195 | 362 | 553 | 4.45e-34 | 127 |
| MS.gene97857.t1 | AT1G69850 | 35.714 | 196 | 121 | 4 | 1 | 195 | 389 | 580 | 4.96e-34 | 128 |
| MS.gene97857.t1 | AT1G22540 | 35.638 | 188 | 118 | 2 | 4 | 191 | 365 | 549 | 1.36e-33 | 126 |
| MS.gene97857.t1 | AT3G21670 | 36.316 | 190 | 106 | 2 | 7 | 196 | 386 | 560 | 1.58e-33 | 126 |
| MS.gene97857.t1 | AT1G27040 | 36.181 | 199 | 111 | 5 | 1 | 193 | 340 | 528 | 4.75e-33 | 125 |
| MS.gene97857.t1 | AT1G27040 | 36.181 | 199 | 111 | 5 | 1 | 193 | 372 | 560 | 4.76e-33 | 125 |
| MS.gene97857.t1 | AT1G27040 | 36.181 | 199 | 111 | 5 | 1 | 193 | 368 | 556 | 5.03e-33 | 125 |
| MS.gene97857.t1 | AT3G47960 | 36.126 | 191 | 116 | 3 | 6 | 194 | 422 | 608 | 6.05e-33 | 125 |
| MS.gene97857.t1 | AT1G72120 | 35.859 | 198 | 116 | 4 | 1 | 194 | 362 | 552 | 1.52e-31 | 120 |
| MS.gene97857.t1 | AT1G72130 | 33.163 | 196 | 121 | 4 | 4 | 199 | 235 | 420 | 2.47e-30 | 116 |
| MS.gene97857.t1 | AT1G72130 | 33.163 | 196 | 121 | 4 | 4 | 199 | 235 | 420 | 2.47e-30 | 116 |
| MS.gene97857.t1 | AT1G68570 | 33.333 | 201 | 130 | 3 | 1 | 200 | 347 | 544 | 2.63e-30 | 117 |
| MS.gene97857.t1 | AT1G68570 | 33.333 | 201 | 130 | 3 | 1 | 200 | 377 | 574 | 3.16e-30 | 117 |
| MS.gene97857.t1 | AT1G72130 | 33.163 | 196 | 121 | 4 | 4 | 199 | 353 | 538 | 6.95e-30 | 116 |
| MS.gene97857.t1 | AT5G62680 | 32.984 | 191 | 122 | 3 | 6 | 194 | 406 | 592 | 1.72e-29 | 115 |
| MS.gene97857.t1 | AT1G72125 | 33.333 | 198 | 129 | 2 | 1 | 198 | 366 | 560 | 4.27e-29 | 114 |
| MS.gene97857.t1 | AT3G16180 | 37.864 | 206 | 112 | 5 | 13 | 207 | 391 | 591 | 4.46e-29 | 114 |
| MS.gene97857.t1 | AT1G52190 | 36.649 | 191 | 114 | 3 | 3 | 191 | 381 | 566 | 7.47e-29 | 113 |
| MS.gene97857.t1 | AT1G32450 | 33.649 | 211 | 131 | 5 | 1 | 208 | 395 | 599 | 8.38e-29 | 113 |
| MS.gene97857.t1 | AT1G22570 | 34.031 | 191 | 120 | 2 | 4 | 194 | 339 | 523 | 8.48e-29 | 113 |
| MS.gene97857.t1 | AT1G33440 | 33.028 | 218 | 131 | 5 | 5 | 216 | 388 | 596 | 1.02e-28 | 113 |
| MS.gene97857.t1 | AT1G22570 | 34.031 | 191 | 120 | 2 | 4 | 194 | 376 | 560 | 1.09e-28 | 113 |
| MS.gene97857.t1 | AT5G46050 | 35.928 | 167 | 103 | 2 | 4 | 170 | 266 | 428 | 1.15e-28 | 112 |
| MS.gene97857.t1 | AT1G18880 | 32.143 | 196 | 125 | 3 | 3 | 194 | 375 | 566 | 1.29e-28 | 112 |
| MS.gene97857.t1 | AT2G37900 | 32.632 | 190 | 116 | 3 | 6 | 195 | 311 | 488 | 1.35e-28 | 112 |
| MS.gene97857.t1 | AT2G26690 | 34.951 | 206 | 124 | 5 | 1 | 205 | 341 | 537 | 1.52e-28 | 112 |
| MS.gene97857.t1 | AT2G26690 | 34.951 | 206 | 124 | 5 | 1 | 205 | 329 | 525 | 1.63e-28 | 112 |
| MS.gene97857.t1 | AT5G62730 | 31.188 | 202 | 131 | 4 | 1 | 197 | 331 | 529 | 1.66e-28 | 112 |
| MS.gene97857.t1 | AT2G37900 | 32.632 | 190 | 116 | 3 | 6 | 195 | 390 | 567 | 1.71e-28 | 112 |
| MS.gene97857.t1 | AT2G26690 | 34.951 | 206 | 124 | 5 | 1 | 205 | 374 | 570 | 1.90e-28 | 112 |
| MS.gene97857.t1 | AT5G62730 | 31.188 | 202 | 131 | 4 | 1 | 197 | 390 | 588 | 1.92e-28 | 112 |
| MS.gene97857.t1 | AT5G46050 | 35.928 | 167 | 103 | 2 | 4 | 170 | 378 | 540 | 2.22e-28 | 112 |
| MS.gene97857.t1 | AT3G01350 | 30.457 | 197 | 136 | 1 | 7 | 203 | 365 | 560 | 2.26e-28 | 112 |
| MS.gene97857.t1 | AT5G14940 | 28.866 | 194 | 127 | 3 | 7 | 197 | 359 | 544 | 5.25e-28 | 110 |
| MS.gene97857.t1 | AT5G46040 | 33.649 | 211 | 133 | 4 | 4 | 212 | 378 | 583 | 2.12e-27 | 109 |
| MS.gene97857.t1 | AT1G59740 | 33.880 | 183 | 110 | 3 | 5 | 186 | 397 | 569 | 4.67e-27 | 108 |
| MS.gene97857.t1 | AT1G69860 | 33.511 | 188 | 112 | 2 | 7 | 194 | 375 | 549 | 2.80e-26 | 106 |
| MS.gene97857.t1 | AT1G27080 | 31.319 | 182 | 111 | 3 | 13 | 194 | 339 | 506 | 1.36e-25 | 103 |
| MS.gene97857.t1 | AT1G27080 | 30.319 | 188 | 117 | 3 | 7 | 194 | 375 | 548 | 1.47e-25 | 104 |
| MS.gene97857.t1 | AT4G21680 | 35.204 | 196 | 119 | 4 | 1 | 193 | 382 | 572 | 2.22e-24 | 100 |
| MS.gene97857.t1 | AT1G12110 | 30.288 | 208 | 136 | 4 | 1 | 208 | 384 | 582 | 2.27e-24 | 100 |
| MS.gene97857.t1 | AT5G19640 | 30.769 | 195 | 113 | 4 | 1 | 192 | 407 | 582 | 3.38e-23 | 97.4 |
| MS.gene97857.t1 | AT3G25280 | 33.974 | 156 | 90 | 3 | 37 | 191 | 378 | 521 | 1.16e-21 | 92.8 |
| MS.gene97857.t1 | AT3G25260 | 30.526 | 190 | 107 | 5 | 5 | 191 | 348 | 515 | 5.22e-21 | 90.9 |
| MS.gene97857.t1 | AT3G45650 | 28.713 | 202 | 124 | 5 | 7 | 208 | 368 | 549 | 1.18e-20 | 90.1 |
| MS.gene97857.t1 | AT5G28470 | 29.444 | 180 | 117 | 4 | 13 | 191 | 383 | 553 | 3.20e-19 | 85.9 |
| MS.gene97857.t1 | AT3G45660 | 28.293 | 205 | 130 | 5 | 7 | 211 | 388 | 575 | 3.50e-19 | 85.9 |
| MS.gene97857.t1 | AT3G45660 | 28.293 | 205 | 130 | 5 | 7 | 211 | 367 | 554 | 3.61e-19 | 85.9 |
| MS.gene97857.t1 | AT3G45660 | 28.293 | 205 | 130 | 5 | 7 | 211 | 367 | 554 | 3.61e-19 | 85.9 |
| MS.gene97857.t1 | AT5G11570 | 30.159 | 189 | 118 | 3 | 3 | 191 | 302 | 476 | 3.06e-18 | 82.8 |
| MS.gene97857.t1 | AT5G28470 | 29.444 | 180 | 115 | 5 | 13 | 191 | 383 | 551 | 9.65e-18 | 81.6 |
| MS.gene97857.t1 | AT3G45710 | 27.128 | 188 | 114 | 6 | 22 | 205 | 391 | 559 | 6.87e-17 | 79.3 |
| MS.gene97857.t1 | AT3G45680 | 26.738 | 187 | 115 | 5 | 22 | 207 | 390 | 555 | 8.22e-17 | 79.0 |
| MS.gene97857.t1 | AT3G45720 | 29.032 | 186 | 110 | 7 | 9 | 194 | 377 | 540 | 7.52e-16 | 76.3 |
| MS.gene97857.t1 | AT3G45650 | 25.439 | 228 | 124 | 6 | 7 | 208 | 368 | 575 | 1.17e-15 | 75.5 |
| MS.gene97857.t1 | AT3G45700 | 26.500 | 200 | 121 | 6 | 9 | 204 | 369 | 546 | 6.33e-15 | 73.6 |
Find 25 sgRNAs with CRISPR-Local
Find 35 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACATTAAACTTGATAATT+TGG | 0.135880 | 7.2:+92298589 | MS.gene97857:CDS |
| TGCCAAATTTAAGTGCTTAT+TGG | 0.163181 | 7.2:+92298216 | MS.gene97857:CDS |
| TTGATTCAATATTGCTTAAT+TGG | 0.195137 | 7.2:+92298242 | MS.gene97857:CDS |
| AACCAATAAGCACTTAAATT+TGG | 0.204333 | 7.2:-92298218 | None:intergenic |
| CAAAGAATTGGAATTGGTTT+AGG | 0.253602 | 7.2:+92298095 | MS.gene97857:CDS |
| GCTGCTTTAGCTGGTGGATT+AGG | 0.281571 | 7.2:+92298353 | MS.gene97857:CDS |
| TGAAAAGCGGTACAAAAGTT+TGG | 0.355525 | 7.2:-92298034 | None:intergenic |
| GCATCGCAGCTTCAAAGAAT+TGG | 0.376023 | 7.2:+92298083 | MS.gene97857:CDS |
| CAGATAAAAGACAAGAATCT+TGG | 0.379936 | 7.2:+92298429 | MS.gene97857:CDS |
| CAGCTTCAAAGAATTGGAAT+TGG | 0.381580 | 7.2:+92298089 | MS.gene97857:CDS |
| TCTGCTTATGCTGCTTTAGC+TGG | 0.393452 | 7.2:+92298344 | MS.gene97857:CDS |
| TTGATAATTTGGCAAACAAT+GGG | 0.441596 | 7.2:+92298600 | MS.gene97857:CDS |
| TAAGCACTTAAATTTGGCAT+TGG | 0.472247 | 7.2:-92298212 | None:intergenic |
| CCTGATGCTATGAAAAGTAT+TGG | 0.473797 | 7.2:+92298320 | MS.gene97857:CDS |
| CTTGATAATTTGGCAAACAA+TGG | 0.474016 | 7.2:+92298599 | MS.gene97857:CDS |
| GCTTATGCTGCTTTAGCTGG+TGG | 0.504449 | 7.2:+92298347 | MS.gene97857:CDS |
| ATGAGGAATACACTTAGTCC+TGG | 0.530608 | 7.2:-92297996 | None:intergenic |
| CAGCACATAGATACAAATAC+AGG | 0.546985 | 7.2:+92298543 | MS.gene97857:CDS |
| GACACAACATGTTTATGAGA+TGG | 0.562119 | 7.2:+92298565 | MS.gene97857:CDS |
| AGTGTTGTTAAATCAGCCAC+TGG | 0.562839 | 7.2:+92298401 | MS.gene97857:CDS |
| GGTAATAGAGAGCTAATATG+AGG | 0.570895 | 7.2:-92298013 | None:intergenic |
| CGCATCACTGGTCATCCGCA+TGG | 0.596174 | 7.2:+92298059 | MS.gene97857:CDS |
| CCAGTGATGCGTTTGAAAAG+CGG | 0.602166 | 7.2:-92298047 | None:intergenic |
| TTGTCTCAAAACATCAACAC+TGG | 0.656717 | 7.2:+92298452 | MS.gene97857:CDS |
| TGAAGCTGCGATGCACCATG+CGG | 0.707890 | 7.2:-92298074 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATTCAATATTGCTTAAT+TGG | + | chr7.2:92298242-92298261 | MS.gene97857:CDS | 20.0% |
| !!! | GAACATTAAACTTGATAATT+TGG | + | chr7.2:92298589-92298608 | MS.gene97857:CDS | 20.0% |
| ! | AACCAATAAGCACTTAAATT+TGG | - | chr7.2:92298221-92298240 | None:intergenic | 25.0% |
| !! | TTGATAATTTGGCAAACAAT+GGG | + | chr7.2:92298600-92298619 | MS.gene97857:CDS | 25.0% |
| !!! | CAAGTTTGATTACTTTTACT+GGG | + | chr7.2:92298475-92298494 | MS.gene97857:CDS | 25.0% |
| CAGATAAAAGACAAGAATCT+TGG | + | chr7.2:92298429-92298448 | MS.gene97857:CDS | 30.0% | |
| TAAGCACTTAAATTTGGCAT+TGG | - | chr7.2:92298215-92298234 | None:intergenic | 30.0% | |
| TGCCAAATTTAAGTGCTTAT+TGG | + | chr7.2:92298216-92298235 | MS.gene97857:CDS | 30.0% | |
| ! | CAAAGAATTGGAATTGGTTT+AGG | + | chr7.2:92298095-92298114 | MS.gene97857:CDS | 30.0% |
| ! | CTTGATAATTTGGCAAACAA+TGG | + | chr7.2:92298599-92298618 | MS.gene97857:CDS | 30.0% |
| ! | TCTTTTATCTGAATTTCCAG+TGG | - | chr7.2:92298420-92298439 | None:intergenic | 30.0% |
| ! | TTCGATTTTATCAGTTGCTT+GGG | + | chr7.2:92298121-92298140 | MS.gene97857:CDS | 30.0% |
| ! | TTTCGATTTTATCAGTTGCT+TGG | + | chr7.2:92298120-92298139 | MS.gene97857:CDS | 30.0% |
| !! | GCAAGTTTGATTACTTTTAC+TGG | + | chr7.2:92298474-92298493 | MS.gene97857:CDS | 30.0% |
| !!! | ATTTTGCATTGTTGGTTTGT+TGG | + | chr7.2:92298277-92298296 | MS.gene97857:CDS | 30.0% |
| CAGCACATAGATACAAATAC+AGG | + | chr7.2:92298543-92298562 | MS.gene97857:CDS | 35.0% | |
| CAGCTTCAAAGAATTGGAAT+TGG | + | chr7.2:92298089-92298108 | MS.gene97857:CDS | 35.0% | |
| GACACAACATGTTTATGAGA+TGG | + | chr7.2:92298565-92298584 | MS.gene97857:CDS | 35.0% | |
| GGTAATAGAGAGCTAATATG+AGG | - | chr7.2:92298016-92298035 | None:intergenic | 35.0% | |
| TGAAAAGCGGTACAAAAGTT+TGG | - | chr7.2:92298037-92298056 | None:intergenic | 35.0% | |
| TTGTCTCAAAACATCAACAC+TGG | + | chr7.2:92298452-92298471 | MS.gene97857:CDS | 35.0% | |
| ! | CCAATACTTTTCATAGCATC+AGG | - | chr7.2:92298323-92298342 | None:intergenic | 35.0% |
| ! | CCTGATGCTATGAAAAGTAT+TGG | + | chr7.2:92298320-92298339 | MS.gene97857:CDS | 35.0% |
| !! | GCTGAAGTATTTTGCATTGT+TGG | + | chr7.2:92298269-92298288 | MS.gene97857:CDS | 35.0% |
| ACACTTAGTCCTGGAAAAAC+CGG | - | chr7.2:92297990-92298009 | None:intergenic | 40.0% | |
| ATGAGGAATACACTTAGTCC+TGG | - | chr7.2:92297999-92298018 | None:intergenic | 40.0% | |
| ! | AGTGTTGTTAAATCAGCCAC+TGG | + | chr7.2:92298401-92298420 | MS.gene97857:CDS | 40.0% |
| CCAGTGATGCGTTTGAAAAG+CGG | - | chr7.2:92298050-92298069 | None:intergenic | 45.0% | |
| GCATCGCAGCTTCAAAGAAT+TGG | + | chr7.2:92298083-92298102 | MS.gene97857:CDS | 45.0% | |
| !! | TCTGCTTATGCTGCTTTAGC+TGG | + | chr7.2:92298344-92298363 | MS.gene97857:CDS | 45.0% |
| !! | CCGCTTTTCAAACGCATCAC+TGG | + | chr7.2:92298047-92298066 | MS.gene97857:CDS | 50.0% |
| !! | GCTGCTTTAGCTGGTGGATT+AGG | + | chr7.2:92298353-92298372 | MS.gene97857:CDS | 50.0% |
| !! | GCTTATGCTGCTTTAGCTGG+TGG | + | chr7.2:92298347-92298366 | MS.gene97857:CDS | 50.0% |
| TGAAGCTGCGATGCACCATG+CGG | - | chr7.2:92298077-92298096 | None:intergenic | 55.0% | |
| CGCATCACTGGTCATCCGCA+TGG | + | chr7.2:92298059-92298078 | MS.gene97857:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 92297984 | 92298646 | 92297984 | ID=MS.gene97857 |
| chr7.2 | mRNA | 92297984 | 92298646 | 92297984 | ID=MS.gene97857.t1;Parent=MS.gene97857 |
| chr7.2 | exon | 92297984 | 92298646 | 92297984 | ID=MS.gene97857.t1.exon1;Parent=MS.gene97857.t1 |
| chr7.2 | CDS | 92297984 | 92298646 | 92297984 | ID=cds.MS.gene97857.t1;Parent=MS.gene97857.t1 |
| Gene Sequence |
| Protein sequence |
