Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98561.t1 | XP_003611980.1 | 94.8 | 115 | 5 | 1 | 5 | 119 | 452 | 565 | 1.40E-54 | 223.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98561.t1 | Q9XFH4 | 78.8 | 99 | 20 | 1 | 21 | 119 | 486 | 583 | 1.9e-39 | 164.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98561.t1 | G7KDI7 | 94.8 | 115 | 5 | 1 | 5 | 119 | 452 | 565 | 1.0e-54 | 223.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene98561 | 0.822643 | 2.12E-53 | -1.69E-46 |
| MS.gene049877 | MS.gene98561 | 0.800764 | 1.24E-48 | -1.69E-46 |
| MS.gene050026 | MS.gene98561 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene050029 | MS.gene98561 | 0.806106 | 9.66E-50 | -1.69E-46 |
| MS.gene052190 | MS.gene98561 | 0.808727 | 2.69E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene98561 | 0.805996 | 1.02E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene98561 | 0.821596 | 3.71E-53 | -1.69E-46 |
| MS.gene053166 | MS.gene98561 | 0.817357 | 3.44E-52 | -1.69E-46 |
| MS.gene053396 | MS.gene98561 | 0.810614 | 1.06E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene98561 | 0.805742 | 1.15E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene98561 | 0.85619 | 3.80E-62 | -1.69E-46 |
| MS.gene05423 | MS.gene98561 | 0.811236 | 7.75E-51 | -1.69E-46 |
| MS.gene054291 | MS.gene98561 | -0.83278 | 7.78E-56 | -1.69E-46 |
| MS.gene054651 | MS.gene98561 | 0.806471 | 8.10E-50 | -1.69E-46 |
| MS.gene054991 | MS.gene98561 | 0.813712 | 2.23E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene98561 | 0.805455 | 1.32E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene98561 | 0.827189 | 1.79E-54 | -1.69E-46 |
| MS.gene055841 | MS.gene98561 | 0.801374 | 9.28E-49 | -1.69E-46 |
| MS.gene056162 | MS.gene98561 | 0.800617 | 1.33E-48 | -1.69E-46 |
| MS.gene056776 | MS.gene98561 | 0.819257 | 1.28E-52 | -1.69E-46 |
| MS.gene056779 | MS.gene98561 | 0.812156 | 4.89E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene98561 | 0.811063 | 8.44E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene98561 | 0.814063 | 1.86E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene98561 | 0.808961 | 2.39E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene98561 | 0.823607 | 1.26E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene98561 | 0.806143 | 9.49E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene98561 | 0.805433 | 1.34E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene98561 | 0.800281 | 1.55E-48 | -1.69E-46 |
| MS.gene060634 | MS.gene98561 | -0.829455 | 5.10E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98561.t1 | MTR_4g077600 | 88.800 | 125 | 13 | 1 | 15 | 139 | 42 | 165 | 8.98e-72 | 222 |
| MS.gene98561.t1 | MTR_5g020000 | 94.783 | 115 | 5 | 1 | 5 | 119 | 452 | 565 | 7.55e-68 | 228 |
| MS.gene98561.t1 | MTR_4g077600 | 91.429 | 105 | 8 | 1 | 15 | 119 | 83 | 186 | 3.31e-61 | 197 |
| MS.gene98561.t1 | MTR_8g018930 | 95.312 | 64 | 3 | 0 | 15 | 78 | 42 | 105 | 4.34e-36 | 129 |
| MS.gene98561.t1 | MTR_7g075850 | 94.545 | 55 | 3 | 0 | 168 | 222 | 114 | 168 | 9.15e-26 | 104 |
| MS.gene98561.t1 | MTR_8g033270 | 83.636 | 55 | 9 | 0 | 168 | 222 | 113 | 167 | 8.30e-23 | 96.7 |
| MS.gene98561.t1 | MTR_5g005840 | 45.833 | 96 | 47 | 2 | 20 | 115 | 637 | 727 | 4.24e-16 | 80.9 |
| MS.gene98561.t1 | MTR_1g105050 | 44.792 | 96 | 49 | 2 | 20 | 115 | 650 | 741 | 1.08e-15 | 79.7 |
| MS.gene98561.t1 | MTR_1g013190 | 39.823 | 113 | 52 | 3 | 15 | 119 | 563 | 667 | 7.13e-15 | 77.0 |
| MS.gene98561.t1 | MTR_4g118845 | 42.453 | 106 | 53 | 3 | 13 | 115 | 444 | 544 | 1.30e-14 | 76.3 |
| MS.gene98561.t1 | MTR_4g118845 | 42.453 | 106 | 53 | 3 | 13 | 115 | 257 | 357 | 2.00e-14 | 75.5 |
| MS.gene98561.t1 | MTR_4g118720 | 37.719 | 114 | 60 | 4 | 9 | 115 | 1270 | 1379 | 2.39e-14 | 75.9 |
| MS.gene98561.t1 | MTR_3g053910 | 37.607 | 117 | 66 | 2 | 7 | 117 | 829 | 944 | 5.84e-14 | 74.3 |
| MS.gene98561.t1 | MTR_3g053910 | 37.607 | 117 | 66 | 2 | 7 | 117 | 858 | 973 | 5.96e-14 | 74.3 |
| MS.gene98561.t1 | MTR_8g030550 | 37.815 | 119 | 60 | 4 | 9 | 119 | 1260 | 1372 | 6.94e-13 | 70.9 |
| MS.gene98561.t1 | MTR_8g030550 | 36.134 | 119 | 62 | 4 | 9 | 119 | 1260 | 1372 | 7.23e-13 | 70.9 |
| MS.gene98561.t1 | MTR_8g030550 | 38.793 | 116 | 57 | 4 | 9 | 116 | 1260 | 1369 | 8.13e-13 | 70.9 |
| MS.gene98561.t1 | MTR_5g090090 | 38.393 | 112 | 62 | 2 | 12 | 117 | 880 | 990 | 8.58e-13 | 70.9 |
| MS.gene98561.t1 | MTR_5g090090 | 38.393 | 112 | 62 | 2 | 12 | 117 | 880 | 990 | 9.40e-13 | 70.5 |
| MS.gene98561.t1 | MTR_8g033030 | 96.774 | 31 | 1 | 0 | 279 | 309 | 66 | 96 | 2.40e-12 | 63.2 |
| MS.gene98561.t1 | MTR_7g078090 | 38.136 | 118 | 65 | 4 | 20 | 135 | 1286 | 1397 | 5.00e-12 | 68.6 |
| MS.gene98561.t1 | MTR_7g045505 | 37.500 | 96 | 57 | 2 | 20 | 115 | 279 | 371 | 9.12e-12 | 67.4 |
| MS.gene98561.t1 | MTR_7g045505 | 37.500 | 96 | 57 | 2 | 20 | 115 | 279 | 371 | 1.02e-11 | 67.0 |
| MS.gene98561.t1 | MTR_6g477950 | 52.941 | 51 | 24 | 0 | 338 | 388 | 94 | 144 | 4.35e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98561.t1 | AT5G66750 | 78.788 | 99 | 20 | 1 | 21 | 119 | 486 | 583 | 4.71e-40 | 152 |
| MS.gene98561.t1 | AT3G61120 | 60.606 | 66 | 25 | 1 | 168 | 233 | 111 | 175 | 9.90e-17 | 79.7 |
| MS.gene98561.t1 | AT2G45650 | 62.295 | 61 | 23 | 0 | 168 | 228 | 112 | 172 | 2.09e-16 | 79.0 |
| MS.gene98561.t1 | AT3G06010 | 42.708 | 96 | 51 | 2 | 20 | 115 | 677 | 768 | 2.35e-15 | 78.6 |
| MS.gene98561.t1 | AT5G19310 | 43.750 | 96 | 50 | 2 | 20 | 115 | 395 | 486 | 4.34e-15 | 77.8 |
| MS.gene98561.t1 | AT5G19310 | 43.750 | 96 | 50 | 2 | 20 | 115 | 659 | 750 | 5.35e-15 | 77.4 |
| MS.gene98561.t1 | AT2G25170 | 37.615 | 109 | 60 | 3 | 15 | 119 | 576 | 680 | 7.82e-15 | 77.0 |
| MS.gene98561.t1 | AT2G25170 | 37.615 | 109 | 60 | 3 | 15 | 119 | 567 | 671 | 8.39e-15 | 77.0 |
| MS.gene98561.t1 | AT2G25170 | 37.615 | 109 | 60 | 3 | 15 | 119 | 550 | 654 | 8.59e-15 | 77.0 |
| MS.gene98561.t1 | AT2G25170 | 37.615 | 109 | 60 | 3 | 15 | 119 | 550 | 654 | 8.59e-15 | 77.0 |
| MS.gene98561.t1 | AT2G28290 | 39.474 | 114 | 58 | 5 | 9 | 115 | 1019 | 1128 | 8.78e-15 | 77.0 |
| MS.gene98561.t1 | AT2G28290 | 39.474 | 114 | 58 | 5 | 9 | 115 | 1019 | 1128 | 8.78e-15 | 77.0 |
| MS.gene98561.t1 | AT2G28290 | 39.474 | 114 | 58 | 5 | 9 | 115 | 1019 | 1128 | 8.78e-15 | 77.0 |
| MS.gene98561.t1 | AT2G28290 | 39.474 | 114 | 58 | 5 | 9 | 115 | 1020 | 1129 | 8.78e-15 | 77.0 |
| MS.gene98561.t1 | AT2G28290 | 39.474 | 114 | 58 | 5 | 9 | 115 | 1019 | 1128 | 8.78e-15 | 77.0 |
| MS.gene98561.t1 | AT2G28290 | 39.474 | 114 | 58 | 5 | 9 | 115 | 1020 | 1129 | 8.78e-15 | 77.0 |
| MS.gene98561.t1 | AT2G13370 | 39.316 | 117 | 62 | 3 | 7 | 117 | 883 | 996 | 3.13e-14 | 75.1 |
| MS.gene98561.t1 | AT2G13370 | 39.316 | 117 | 62 | 3 | 7 | 117 | 883 | 996 | 3.13e-14 | 75.1 |
| MS.gene98561.t1 | AT2G13370 | 39.316 | 117 | 62 | 3 | 7 | 117 | 883 | 996 | 3.13e-14 | 75.1 |
| MS.gene98561.t1 | AT2G44980 | 38.739 | 111 | 49 | 4 | 13 | 115 | 332 | 431 | 1.16e-13 | 73.2 |
| MS.gene98561.t1 | AT2G44980 | 38.739 | 111 | 49 | 4 | 13 | 115 | 324 | 423 | 1.18e-13 | 73.2 |
| MS.gene98561.t1 | AT2G44980 | 38.739 | 111 | 49 | 4 | 13 | 115 | 333 | 432 | 1.25e-13 | 73.2 |
| MS.gene98561.t1 | AT2G46020 | 37.705 | 122 | 60 | 4 | 20 | 135 | 1273 | 1384 | 1.26e-12 | 70.5 |
| MS.gene98561.t1 | AT2G46020 | 37.705 | 122 | 60 | 4 | 20 | 135 | 1273 | 1384 | 1.26e-12 | 70.5 |
| MS.gene98561.t1 | AT2G46020 | 37.705 | 122 | 60 | 4 | 20 | 135 | 1273 | 1384 | 1.26e-12 | 70.5 |
| MS.gene98561.t1 | AT2G46020 | 37.705 | 122 | 60 | 4 | 20 | 135 | 1272 | 1383 | 1.31e-12 | 70.1 |
| MS.gene98561.t1 | AT2G46020 | 37.705 | 122 | 60 | 4 | 20 | 135 | 1272 | 1383 | 1.31e-12 | 70.1 |
| MS.gene98561.t1 | AT2G46020 | 37.705 | 122 | 60 | 4 | 20 | 135 | 1272 | 1383 | 1.31e-12 | 70.1 |
| MS.gene98561.t1 | AT5G44800 | 40.541 | 111 | 58 | 4 | 15 | 120 | 959 | 1066 | 4.09e-12 | 68.6 |
Find 75 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAACGAGTCTTAATAATT+TGG | 0.204285 | 5.2:+72671407 | MS.gene98561:CDS |
| CAAAGCCTGTTCATGTTTAC+AGG | 0.245028 | 5.2:+72672737 | MS.gene98561:CDS |
| CTTGGAAGCACAATTATTAT+AGG | 0.252841 | 5.2:-72674323 | None:intergenic |
| TTGCTTGCAGACACAGATTA+TGG | 0.287180 | 5.2:+72673272 | MS.gene98561:intron |
| CTCTTAGAATCAGTCTTTGA+TGG | 0.316379 | 5.2:+72671465 | MS.gene98561:CDS |
| GAATCCTCAAGTGGATTTAC+AGG | 0.323066 | 5.2:+72672684 | MS.gene98561:intron |
| TCAATTGCTTGACCGATTGC+TGG | 0.350272 | 5.2:+72671622 | MS.gene98561:CDS |
| CAAGAGTTTAACAAAAGTTT+CGG | 0.353401 | 5.2:+72674027 | MS.gene98561:CDS |
| GACCAAAGTGCTAGATATAA+TGG | 0.367410 | 5.2:+72671787 | MS.gene98561:CDS |
| TCAAACCTTCTTCTTGTGCT+TGG | 0.370945 | 5.2:+72676025 | MS.gene98561:CDS |
| CAAAAGTTTCGGTAAGCCTT+AGG | 0.394429 | 5.2:+72674038 | MS.gene98561:CDS |
| TTCGAAGTTCGCAGGATTGA+TGG | 0.400367 | 5.2:+72671833 | MS.gene98561:CDS |
| ACAGATTATGGTTGGACAAA+TGG | 0.406697 | 5.2:+72673284 | MS.gene98561:CDS |
| ATAATTTGGTAATTCAGCTT+AGG | 0.413604 | 5.2:+72671421 | MS.gene98561:CDS |
| TTAAGATATCTTGATAGAAA+AGG | 0.432646 | 5.2:+72674768 | MS.gene98561:CDS |
| GAGACATAAATAAGCAACTT+AGG | 0.433002 | 5.2:+72673751 | MS.gene98561:CDS |
| TGTAGCTCTTTCATGTTCAA+TGG | 0.438226 | 5.2:-72673070 | None:intergenic |
| GTTCGGTGAAGCTGGATGAT+AGG | 0.450647 | 5.2:+72671855 | MS.gene98561:CDS |
| GAGAGCCTGTAAACATGAAC+AGG | 0.456171 | 5.2:-72672742 | None:intergenic |
| CTTGATAGAAAAGGCAAGAA+TGG | 0.458584 | 5.2:+72674777 | MS.gene98561:CDS |
| GATTGATGGTTCGGTGAAGC+TGG | 0.464329 | 5.2:+72671847 | MS.gene98561:CDS |
| AGTTCGCAGGATTGATGGTT+CGG | 0.469989 | 5.2:+72671838 | MS.gene98561:CDS |
| CTTGGAACCTCTCTACTTTG+TGG | 0.472185 | 5.2:+72676043 | MS.gene98561:CDS |
| AATCTAGAGAAACAACTTGA+AGG | 0.479115 | 5.2:+72673094 | MS.gene98561:CDS |
| ATCCATTATATCTAGCACTT+TGG | 0.479735 | 5.2:-72671789 | None:intergenic |
| CAAATAGCCGCTCCAGCAAT+CGG | 0.487147 | 5.2:-72671634 | None:intergenic |
| AAGAAGAAGGTTTGAAAGGA+TGG | 0.493952 | 5.2:-72676017 | None:intergenic |
| CATTTAATTAATGAGACACT+GGG | 0.495505 | 5.2:+72671223 | None:intergenic |
| AGGTTCCAAGCACAAGAAGA+AGG | 0.498266 | 5.2:-72676030 | None:intergenic |
| TCAAGTGGATTTACAGGCCA+TGG | 0.499561 | 5.2:+72672690 | MS.gene98561:CDS |
| AAGACTGATTCTAAGAGGTC+AGG | 0.504261 | 5.2:-72671459 | None:intergenic |
| AAGGAGCTTTAGCACAAACT+AGG | 0.524425 | 5.2:+72673113 | MS.gene98561:CDS |
| TCATTTAATTAATGAGACAC+TGG | 0.525047 | 5.2:+72671222 | None:intergenic |
| ACCAAATTATTAAGACTCGT+TGG | 0.527668 | 5.2:-72671408 | None:intergenic |
| GGAGGGTCTGTACCAATGCT+TGG | 0.529102 | 5.2:+72671882 | MS.gene98561:CDS |
| ATGGATAGATGTCACAGAAT+CGG | 0.529752 | 5.2:+72672709 | MS.gene98561:CDS |
| AATGGAAGAGCTCAAGAGAA+AGG | 0.534556 | 5.2:+72673302 | MS.gene98561:CDS |
| GCTTATTTATGTCTCCAAGA+TGG | 0.536219 | 5.2:-72673743 | None:intergenic |
| ATGTTGCAGGAACGCCATCT+TGG | 0.536441 | 5.2:+72673729 | MS.gene98561:intron |
| CTAACACTGTAGGAGGATCA+TGG | 0.537340 | 5.2:-72676592 | None:intergenic |
| AAAAGGGTTTCGAAGTTCGC+AGG | 0.542238 | 5.2:+72671825 | MS.gene98561:CDS |
| CATCAAAGACTGATTCTAAG+AGG | 0.545515 | 5.2:-72671464 | None:intergenic |
| TGCTGGAGCGGCTATTTGCA+CGG | 0.548438 | 5.2:+72671639 | MS.gene98561:CDS |
| AAGTTGTGTTGTCCAAGCAT+TGG | 0.556162 | 5.2:-72671894 | None:intergenic |
| TTGGACAAGAAACGATCGAT+TGG | 0.561791 | 5.2:+72671254 | MS.gene98561:CDS |
| TTGCAGACACAGATTATGGT+TGG | 0.563237 | 5.2:+72673276 | MS.gene98561:intron |
| TGCTTGACCGATTGCTGGAG+CGG | 0.565312 | 5.2:+72671627 | MS.gene98561:CDS |
| GCACAAGAAGAAGGTTTGAA+AGG | 0.568007 | 5.2:-72676021 | None:intergenic |
| GGAACCTCTCTACTTTGTGG+TGG | 0.572641 | 5.2:+72676046 | MS.gene98561:CDS |
| TGAAGCTGGATGATAGGAAA+CGG | 0.574761 | 5.2:+72671861 | MS.gene98561:CDS |
| TGTAAATGAGAAACAGCTGC+AGG | 0.575982 | 5.2:+72676544 | MS.gene98561:CDS |
| TCAACAGCTAACACTGTAGG+AGG | 0.577253 | 5.2:-72676599 | None:intergenic |
| CGCTACTGCACGATCAGTAG+AGG | 0.577328 | 5.2:+72672764 | MS.gene98561:CDS |
| TGTAAATCTTCGCTTAAGCA+AGG | 0.578162 | 5.2:-72676640 | None:intergenic |
| TGTGGTGGCATTGCAAACCT+TGG | 0.582228 | 5.2:+72676061 | MS.gene98561:CDS |
| TTCTGATCTTCAGTCAGCAG+TGG | 0.594795 | 5.2:+72671765 | MS.gene98561:CDS |
| TGCGCTTAGCAGTAATAAGA+CGG | 0.601521 | 5.2:-72676481 | None:intergenic |
| ACTTCAACAGCTAACACTGT+AGG | 0.604561 | 5.2:-72676602 | None:intergenic |
| CTTTAGCACAAACTAGGCAG+AGG | 0.608366 | 5.2:+72673119 | MS.gene98561:CDS |
| TCAATTATCTCATTCACAGG+AGG | 0.610756 | 5.2:-72671584 | None:intergenic |
| CTTCGCTTAAGCAAGGTCAT+CGG | 0.616870 | 5.2:-72676633 | None:intergenic |
| AGCACAAACTAGGCAGAGGA+AGG | 0.620141 | 5.2:+72673123 | MS.gene98561:CDS |
| GATTCTGTGACATCTATCCA+TGG | 0.629171 | 5.2:-72672707 | None:intergenic |
| TGTACTCCAGAATCCTCAAG+TGG | 0.630189 | 5.2:+72672675 | MS.gene98561:intron |
| AATGAGAAACAGCTGCAGGA+AGG | 0.632595 | 5.2:+72676548 | MS.gene98561:CDS |
| ATGGCCTGTAAATCCACTTG+AGG | 0.637188 | 5.2:-72672688 | None:intergenic |
| CTGATTCTAAGAGGTCAGGA+TGG | 0.643894 | 5.2:-72671455 | None:intergenic |
| TTTAATTAATGAGACACTGG+GGG | 0.644582 | 5.2:+72671225 | None:intergenic |
| GCTATTTGCACGGAATCACA+AGG | 0.650119 | 5.2:+72671649 | MS.gene98561:CDS |
| GCTGGATGATAGGAAACGGA+GGG | 0.657077 | 5.2:+72671865 | MS.gene98561:CDS |
| TGGCATTGCAAACCTTGGAG+TGG | 0.662345 | 5.2:+72676066 | MS.gene98561:CDS |
| AGCTGGATGATAGGAAACGG+AGG | 0.666015 | 5.2:+72671864 | MS.gene98561:CDS |
| GGACAACTAATGAAGATCTG+AGG | 0.681737 | 5.2:+72673990 | MS.gene98561:CDS |
| ATTTAATTAATGAGACACTG+GGG | 0.697632 | 5.2:+72671224 | None:intergenic |
| AATGCCACCACAAAGTAGAG+AGG | 0.713159 | 5.2:-72676050 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACAAATAATTAATTG+TGG | - | chr5.2:72673442-72673461 | None:intergenic | 10.0% |
| !!! | ATTAAATTTAATTTTTCTAC+AGG | + | chr5.2:72675589-72675608 | MS.gene98561:intron | 10.0% |
| !! | AACACTTAAATACTTAATAT+AGG | - | chr5.2:72674857-72674876 | None:intergenic | 15.0% |
| !! | ATAATCTGGTAATTAATTAA+TGG | + | chr5.2:72672973-72672992 | MS.gene98561:intron | 15.0% |
| !! | ATGTCATAAATGATAATTTA+TGG | + | chr5.2:72672012-72672031 | MS.gene98561:intron | 15.0% |
| !! | TGTAACATAAATTATCATTT+AGG | + | chr5.2:72675249-72675268 | MS.gene98561:intron | 15.0% |
| !! | TTATGTCAAAATATAATACT+TGG | - | chr5.2:72674344-72674363 | None:intergenic | 15.0% |
| !!! | AATTTGCTTATATATTTGAA+AGG | + | chr5.2:72673831-72673850 | MS.gene98561:intron | 15.0% |
| !!! | AATTTTTCATTTGAAAGAAA+GGG | + | chr5.2:72671292-72671311 | MS.gene98561:intron | 15.0% |
| !!! | GATTATTATTTTAGTGAAAA+GGG | + | chr5.2:72671809-72671828 | MS.gene98561:CDS | 15.0% |
| !!! | GTTTTTATGATAATTTGATA+AGG | + | chr5.2:72672108-72672127 | MS.gene98561:intron | 15.0% |
| !!! | TTATATTTTAAATTGGTGAT+TGG | + | chr5.2:72674505-72674524 | MS.gene98561:intron | 15.0% |
| !!! | TTTGCTTTATCTAATTTTAA+TGG | - | chr5.2:72675403-72675422 | None:intergenic | 15.0% |
| !!! | TTTTTTAAAAATTGCTCTAA+AGG | + | chr5.2:72675654-72675673 | MS.gene98561:intron | 15.0% |
| !! | AAAATGATATTGGGAAATTT+AGG | + | chr5.2:72675180-72675199 | MS.gene98561:intron | 20.0% |
| !! | AAATTAGATAAAGCAAAAGT+TGG | + | chr5.2:72675406-72675425 | MS.gene98561:intron | 20.0% |
| !! | AACAAATAATTAATTGTGGT+AGG | - | chr5.2:72673438-72673457 | None:intergenic | 20.0% |
| !! | AATGAGATAATTGAAAAATG+TGG | + | chr5.2:72671593-72671612 | MS.gene98561:CDS | 20.0% |
| !! | AGATACAAAAAAATAGATAG+TGG | + | chr5.2:72673393-72673412 | MS.gene98561:intron | 20.0% |
| !! | ATACATTCAATACAATTATC+TGG | - | chr5.2:72673600-72673619 | None:intergenic | 20.0% |
| !! | ATACTTAGATGAATATGATA+CGG | + | chr5.2:72672793-72672812 | MS.gene98561:intron | 20.0% |
| !! | ATATTAAGAAAAGTAACTTG+AGG | - | chr5.2:72671931-72671950 | None:intergenic | 20.0% |
| !! | ATTTAGTTGTTACATAGAAT+AGG | - | chr5.2:72676340-72676359 | None:intergenic | 20.0% |
| !! | CAAATTATCATAAAAACCTT+GGG | - | chr5.2:72672105-72672124 | None:intergenic | 20.0% |
| !! | GATACAAAAAAATAGATAGT+GGG | + | chr5.2:72673394-72673413 | MS.gene98561:intron | 20.0% |
| !! | GTATTTAAGTGTTTAGTATA+TGG | + | chr5.2:72674864-72674883 | MS.gene98561:intron | 20.0% |
| !! | TCAAATTATCATAAAAACCT+TGG | - | chr5.2:72672106-72672125 | None:intergenic | 20.0% |
| !! | TTAACAAGTGTAAATATCAT+AGG | + | chr5.2:72674291-72674310 | MS.gene98561:intron | 20.0% |
| !! | TTAAGATATCTTGATAGAAA+AGG | + | chr5.2:72674768-72674787 | MS.gene98561:CDS | 20.0% |
| !!! | ATGCAAGTGAATATTTATTT+TGG | - | chr5.2:72674456-72674475 | None:intergenic | 20.0% |
| !!! | CAATTTTTCATTTGAAAGAA+AGG | + | chr5.2:72671291-72671310 | MS.gene98561:intron | 20.0% |
| !!! | CAGTGATTATTTTTTTACAT+AGG | - | chr5.2:72675884-72675903 | None:intergenic | 20.0% |
| !!! | GATTTAGATTTTACAAGAAA+TGG | + | chr5.2:72674825-72674844 | MS.gene98561:intron | 20.0% |
| !!! | GGATTATTATTTTAGTGAAA+AGG | + | chr5.2:72671808-72671827 | MS.gene98561:CDS | 20.0% |
| !!! | GTATTGAATGTATTTCTATA+CGG | + | chr5.2:72673607-72673626 | MS.gene98561:intron | 20.0% |
| !!! | TTTAAAATGGAAGTGTTAAT+TGG | - | chr5.2:72676124-72676143 | None:intergenic | 20.0% |
| !!! | TTTATTTTCTGTGTAGTAAA+AGG | + | chr5.2:72673966-72673985 | MS.gene98561:intron | 20.0% |
| ! | AAAAACAGAACACAAGAAAA+AGG | - | chr5.2:72676203-72676222 | None:intergenic | 25.0% |
| ! | AACAAAGCTGAAAAATCATT+AGG | + | chr5.2:72676503-72676522 | MS.gene98561:CDS | 25.0% |
| ! | AACTGAGATCAATATGAATT+TGG | - | chr5.2:72675745-72675764 | None:intergenic | 25.0% |
| ! | AATAAATTCACAACTTGCAT+TGG | + | chr5.2:72674898-72674917 | MS.gene98561:intron | 25.0% |
| ! | AATTAGCTAAATCATCCAAT+CGG | - | chr5.2:72671509-72671528 | None:intergenic | 25.0% |
| ! | ACTGAGATCAATATGAATTT+GGG | - | chr5.2:72675744-72675763 | None:intergenic | 25.0% |
| ! | AGGAAACTAATTTCAGATTT+AGG | - | chr5.2:72674629-72674648 | None:intergenic | 25.0% |
| ! | ATAAATTCACAACTTGCATT+GGG | + | chr5.2:72674899-72674918 | MS.gene98561:intron | 25.0% |
| ! | CAAGAGTTTAACAAAAGTTT+CGG | + | chr5.2:72674027-72674046 | MS.gene98561:CDS | 25.0% |
| ! | GAAAATACCTCGATTTAAAA+TGG | - | chr5.2:72676137-72676156 | None:intergenic | 25.0% |
| ! | TAATATATGTAGACAAACTC+TGG | + | chr5.2:72672381-72672400 | MS.gene98561:intron | 25.0% |
| ! | TAGAAACAAAAAAACACACA+TGG | - | chr5.2:72676180-72676199 | None:intergenic | 25.0% |
| ! | TATATCTTCATGACAGAAAT+TGG | - | chr5.2:72674239-72674258 | None:intergenic | 25.0% |
| ! | TATCATTTAGGAAACTGAAT+GGG | + | chr5.2:72675261-72675280 | MS.gene98561:intron | 25.0% |
| ! | TGATAATTTATGGATCTGTT+TGG | + | chr5.2:72672022-72672041 | MS.gene98561:intron | 25.0% |
| ! | TGATACTTTGTTCTATGAAT+GGG | + | chr5.2:72675289-72675308 | MS.gene98561:intron | 25.0% |
| ! | TGGAATAATTTAATGCATAG+AGG | - | chr5.2:72672306-72672325 | None:intergenic | 25.0% |
| ! | TGTATCTATATCTCTCTAAA+TGG | - | chr5.2:72673380-72673399 | None:intergenic | 25.0% |
| ! | TTATCATTTAGGAAACTGAA+TGG | + | chr5.2:72675260-72675279 | MS.gene98561:intron | 25.0% |
| ! | TTCATTACAGATAATTGCTA+GGG | + | chr5.2:72673035-72673054 | MS.gene98561:intron | 25.0% |
| !! | ATAATTTGGTAATTCAGCTT+AGG | + | chr5.2:72671421-72671440 | MS.gene98561:CDS | 25.0% |
| !! | ATTTTATCGTTATACAGTGT+TGG | - | chr5.2:72673543-72673562 | None:intergenic | 25.0% |
| !! | ATTTTGCAAAAGTAGCTATT+TGG | + | chr5.2:72674158-72674177 | MS.gene98561:intron | 25.0% |
| !! | CAACACCTTAATTTATTTCT+AGG | - | chr5.2:72675219-72675238 | None:intergenic | 25.0% |
| !! | GCAACATTGGTTAATTAAAT+TGG | - | chr5.2:72674207-72674226 | None:intergenic | 25.0% |
| !! | TAAAATGACACTATTTTGTG+AGG | + | chr5.2:72674923-72674942 | MS.gene98561:intron | 25.0% |
| !! | TTTTAACGAAAATTCAGAAG+TGG | + | chr5.2:72672058-72672077 | MS.gene98561:intron | 25.0% |
| !! | TTTTCAATTATCTCATTCAC+AGG | - | chr5.2:72671590-72671609 | None:intergenic | 25.0% |
| !! | TTTTTCATGTCCATATTACA+AGG | + | chr5.2:72676297-72676316 | MS.gene98561:intron | 25.0% |
| !!! | ACTTTTAGGATATAGTTTCT+TGG | - | chr5.2:72672175-72672194 | None:intergenic | 25.0% |
| !!! | ATTTTAACACTTGAATCATG+AGG | + | chr5.2:72674421-72674440 | MS.gene98561:intron | 25.0% |
| !!! | CTGAATTGAAGTTTTTTTGT+TGG | + | chr5.2:72672520-72672539 | MS.gene98561:intron | 25.0% |
| !!! | GAAGTGTTAATTGGATTTTA+GGG | - | chr5.2:72676115-72676134 | None:intergenic | 25.0% |
| !!! | GGTTTTAATAAGAATGTACT+CGG | - | chr5.2:72674595-72674614 | None:intergenic | 25.0% |
| !!! | GTGTTGCTTTAATTTTCTTT+TGG | + | chr5.2:72673196-72673215 | MS.gene98561:intron | 25.0% |
| !!! | TTATGAGATTTTGAAGCTAA+GGG | + | chr5.2:72676371-72676390 | MS.gene98561:intron | 25.0% |
| !!! | TTTATGAGATTTTGAAGCTA+AGG | + | chr5.2:72676370-72676389 | MS.gene98561:intron | 25.0% |
| AAAAAGAAAAGCAGAATCTG+AGG | + | chr5.2:72675815-72675834 | MS.gene98561:intron | 30.0% | |
| AAAGCAACACATGATTTCAT+TGG | - | chr5.2:72673186-72673205 | None:intergenic | 30.0% | |
| AAAGCTGAAAAATCATTAGG+AGG | + | chr5.2:72676506-72676525 | MS.gene98561:CDS | 30.0% | |
| AAATAAGCAACTTAGGTTCA+AGG | + | chr5.2:72673758-72673777 | MS.gene98561:intron | 30.0% | |
| AACTATCACGCATAACTTTA+CGG | - | chr5.2:72672269-72672288 | None:intergenic | 30.0% | |
| AACTTGTAAACATGCTTAAG+GGG | - | chr5.2:72672146-72672165 | None:intergenic | 30.0% | |
| AAGCTGAAAAATCATTAGGA+GGG | + | chr5.2:72676507-72676526 | MS.gene98561:CDS | 30.0% | |
| AATCTAGAGAAACAACTTGA+AGG | + | chr5.2:72673094-72673113 | MS.gene98561:CDS | 30.0% | |
| ACAAGTGTAAATATCATAGG+TGG | + | chr5.2:72674294-72674313 | MS.gene98561:intron | 30.0% | |
| ACCAAATTATTAAGACTCGT+TGG | - | chr5.2:72671411-72671430 | None:intergenic | 30.0% | |
| ACGAGTATATGTTTCAAAAC+TGG | + | chr5.2:72674948-72674967 | MS.gene98561:intron | 30.0% | |
| ATACGATCTAAAAGTTGACA+TGG | - | chr5.2:72675120-72675139 | None:intergenic | 30.0% | |
| ATCAAAGTGGAAAGTCTTAA+GGG | + | chr5.2:72675351-72675370 | MS.gene98561:intron | 30.0% | |
| ATCCATTATATCTAGCACTT+TGG | - | chr5.2:72671792-72671811 | None:intergenic | 30.0% | |
| ATCTCTTCAAATGGTAGAAA+TGG | + | chr5.2:72673484-72673503 | MS.gene98561:intron | 30.0% | |
| ATGTAAGTAAAATGTCCGAT+TGG | + | chr5.2:72671491-72671510 | MS.gene98561:intron | 30.0% | |
| CAAAAGTCAGCAAACAATAA+AGG | - | chr5.2:72674992-72675011 | None:intergenic | 30.0% | |
| CAACTTGTAAACATGCTTAA+GGG | - | chr5.2:72672147-72672166 | None:intergenic | 30.0% | |
| CAGATTTAGGAATCTTAAAC+AGG | - | chr5.2:72674616-72674635 | None:intergenic | 30.0% | |
| CATTTCACTTAACAATCTCA+TGG | - | chr5.2:72672945-72672964 | None:intergenic | 30.0% | |
| CGAAGCCTAGAAATAAATTA+AGG | + | chr5.2:72675211-72675230 | MS.gene98561:intron | 30.0% | |
| CTATATCTCTGTTTAAACCA+TGG | + | chr5.2:72672413-72672432 | MS.gene98561:intron | 30.0% | |
| CTCCATTTATTTCAAGGAAA+TGG | - | chr5.2:72673353-72673372 | None:intergenic | 30.0% | |
| CTCCATTTCCTTGAAATAAA+TGG | + | chr5.2:72673348-72673367 | MS.gene98561:intron | 30.0% | |
| CTGATACTTTGTTCTATGAA+TGG | + | chr5.2:72675288-72675307 | MS.gene98561:intron | 30.0% | |
| CTGTAGGAGAAAATGATATT+GGG | + | chr5.2:72675171-72675190 | MS.gene98561:intron | 30.0% | |
| GAAATGGAGAAGGTAATAAA+TGG | + | chr5.2:72673500-72673519 | MS.gene98561:intron | 30.0% | |
| GAAATGTGTGTAGTATAATC+TGG | + | chr5.2:72672959-72672978 | MS.gene98561:intron | 30.0% | |
| GAGACATAAATAAGCAACTT+AGG | + | chr5.2:72673751-72673770 | MS.gene98561:CDS | 30.0% | |
| GAGGAGTTGTAATAATTTGA+AGG | - | chr5.2:72673151-72673170 | None:intergenic | 30.0% | |
| GCATTTACTAAACCTGAAAT+TGG | + | chr5.2:72674684-72674703 | MS.gene98561:intron | 30.0% | |
| GGCAAAATTCAGTATGATAA+AGG | + | chr5.2:72675022-72675041 | MS.gene98561:intron | 30.0% | |
| GTTCATTACAGATAATTGCT+AGG | + | chr5.2:72673034-72673053 | MS.gene98561:intron | 30.0% | |
| TCACATGTCACAAATTGAAA+AGG | + | chr5.2:72672497-72672516 | MS.gene98561:intron | 30.0% | |
| TCATTACAGATAATTGCTAG+GGG | + | chr5.2:72673036-72673055 | MS.gene98561:intron | 30.0% | |
| TCCAACGAGTCTTAATAATT+TGG | + | chr5.2:72671407-72671426 | MS.gene98561:CDS | 30.0% | |
| TCTGTAGGAGAAAATGATAT+TGG | + | chr5.2:72675170-72675189 | MS.gene98561:intron | 30.0% | |
| TCTTGTCATTAACATACCTA+AGG | - | chr5.2:72674057-72674076 | None:intergenic | 30.0% | |
| TGATAAAGGCAATGTTACAA+AGG | + | chr5.2:72675036-72675055 | MS.gene98561:intron | 30.0% | |
| TGTCTCTTTATTAATGTTGC+AGG | + | chr5.2:72673716-72673735 | MS.gene98561:intron | 30.0% | |
| TGTGTCTTTATCTCTTCAAA+TGG | + | chr5.2:72673475-72673494 | MS.gene98561:intron | 30.0% | |
| TGTTATTAAAAATGCTCCCA+AGG | + | chr5.2:72672086-72672105 | MS.gene98561:intron | 30.0% | |
| TTAGTCTGTAAGAATTGGAA+TGG | + | chr5.2:72675433-72675452 | MS.gene98561:intron | 30.0% | |
| TTATTCATTAACTGCCTCAT+TGG | + | chr5.2:72674545-72674564 | MS.gene98561:intron | 30.0% | |
| TTTACTAAACCTGAAATTGG+TGG | + | chr5.2:72674687-72674706 | MS.gene98561:intron | 30.0% | |
| ! | AACACTTCCATTTTAAATCG+AGG | + | chr5.2:72676127-72676146 | MS.gene98561:intron | 30.0% |
| ! | ATATGATACGGTCCTTTTAT+AGG | + | chr5.2:72672805-72672824 | MS.gene98561:intron | 30.0% |
| ! | ATTTTCTGTGTAGTAAAAGG+TGG | + | chr5.2:72673969-72673988 | MS.gene98561:intron | 30.0% |
| ! | CTTGGAAGCACAATTATTAT+AGG | - | chr5.2:72674326-72674345 | None:intergenic | 30.0% |
| ! | GTTGTCAAGTATTCTCTTTT+AGG | + | chr5.2:72675992-72676011 | MS.gene98561:intron | 30.0% |
| ! | TATGATACGGTCCTTTTATA+GGG | + | chr5.2:72672806-72672825 | MS.gene98561:intron | 30.0% |
| ! | TCATTGGTAAAAAAGTACAG+AGG | - | chr5.2:72673170-72673189 | None:intergenic | 30.0% |
| ! | TGTTAGTAGATGTTGATTGA+TGG | + | chr5.2:72675682-72675701 | MS.gene98561:intron | 30.0% |
| !! | ACTCAGATTCTGAAACAATA+GGG | - | chr5.2:72675854-72675873 | None:intergenic | 30.0% |
| !! | TTCTGAAACAATAGGGAATT+TGG | - | chr5.2:72675847-72675866 | None:intergenic | 30.0% |
| !!! | AGCTACTTTTGCAAAATCAT+TGG | - | chr5.2:72674155-72674174 | None:intergenic | 30.0% |
| !!! | GCTTCAAAAAGAGTACTTTT+AGG | - | chr5.2:72672189-72672208 | None:intergenic | 30.0% |
| !!! | GGAAGTGTTAATTGGATTTT+AGG | - | chr5.2:72676116-72676135 | None:intergenic | 30.0% |
| !!! | GTGTTTTAGTCTGTAAGAAT+TGG | + | chr5.2:72675428-72675447 | MS.gene98561:intron | 30.0% |
| AAAAATCATTAGGAGGGGAT+TGG | + | chr5.2:72676513-72676532 | MS.gene98561:CDS | 35.0% | |
| AACCTGATAGCAATTAGCAA+AGG | - | chr5.2:72671747-72671766 | None:intergenic | 35.0% | |
| AAGAAGAAGGTTTGAAAGGA+TGG | - | chr5.2:72676020-72676039 | None:intergenic | 35.0% | |
| ACACTTCTCATAGTGTCTAT+TGG | + | chr5.2:72674380-72674399 | MS.gene98561:intron | 35.0% | |
| ACAGATTATGGTTGGACAAA+TGG | + | chr5.2:72673284-72673303 | MS.gene98561:CDS | 35.0% | |
| AGAATCTTTCTTCTTTCTGC+TGG | + | chr5.2:72672598-72672617 | MS.gene98561:intron | 35.0% | |
| AGCTGAAAAATCATTAGGAG+GGG | + | chr5.2:72676508-72676527 | MS.gene98561:CDS | 35.0% | |
| ATGACAGAAATTGCAATTGC+AGG | + | chr5.2:72674720-72674739 | MS.gene98561:intron | 35.0% | |
| ATGGATAGATGTCACAGAAT+CGG | + | chr5.2:72672709-72672728 | MS.gene98561:CDS | 35.0% | |
| ATTTGAACCGCCTTGTAATA+TGG | - | chr5.2:72676310-72676329 | None:intergenic | 35.0% | |
| CAAAAAGGTGGAAGTTTCTT+TGG | - | chr5.2:72675463-72675482 | None:intergenic | 35.0% | |
| CACTAATGCTTCAGTTTCAA+TGG | - | chr5.2:72672326-72672345 | None:intergenic | 35.0% | |
| CATCAAAGTGGAAAGTCTTA+AGG | + | chr5.2:72675350-72675369 | MS.gene98561:intron | 35.0% | |
| CTCTTAGAATCAGTCTTTGA+TGG | + | chr5.2:72671465-72671484 | MS.gene98561:CDS | 35.0% | |
| CTTGATAGAAAAGGCAAGAA+TGG | + | chr5.2:72674777-72674796 | MS.gene98561:CDS | 35.0% | |
| GAATCTTTCTTCTTTCTGCT+GGG | + | chr5.2:72672599-72672618 | MS.gene98561:intron | 35.0% | |
| GCAACTTGTAAACATGCTTA+AGG | - | chr5.2:72672148-72672167 | None:intergenic | 35.0% | |
| GCACACATAAGTGTTCAAAA+TGG | - | chr5.2:72673683-72673702 | None:intergenic | 35.0% | |
| GCTTATTTATGTCTCCAAGA+TGG | - | chr5.2:72673746-72673765 | None:intergenic | 35.0% | |
| GGCAATCTCCATTTATTTCA+AGG | - | chr5.2:72673359-72673378 | None:intergenic | 35.0% | |
| GTAACAACTAAATGCTGCAA+CGG | + | chr5.2:72676347-72676366 | MS.gene98561:intron | 35.0% | |
| TCAAATGGTAGAAATGGAGA+AGG | + | chr5.2:72673490-72673509 | MS.gene98561:intron | 35.0% | |
| TCAATTATCTCATTCACAGG+AGG | - | chr5.2:72671587-72671606 | None:intergenic | 35.0% | |
| TGATTATCACCACCAATTTC+AGG | - | chr5.2:72674699-72674718 | None:intergenic | 35.0% | |
| TGTAGCTCTTTCATGTTCAA+TGG | - | chr5.2:72673073-72673092 | None:intergenic | 35.0% | |
| TGTTTCAGAATCTGAGTGAA+TGG | + | chr5.2:72675857-72675876 | MS.gene98561:intron | 35.0% | |
| TTCATGTCCATATTACAAGG+CGG | + | chr5.2:72676300-72676319 | MS.gene98561:intron | 35.0% | |
| TTGTTGTATCATTGAAGTCC+TGG | - | chr5.2:72672570-72672589 | None:intergenic | 35.0% | |
| ! | AAAATCTCCTCTTAGCCTTT+AGG | - | chr5.2:72672222-72672241 | None:intergenic | 35.0% |
| ! | ACTGAAGCATTAGTGGTAAT+TGG | + | chr5.2:72672331-72672350 | MS.gene98561:intron | 35.0% |
| ! | CAAAGAAACTTCCACCTTTT+TGG | + | chr5.2:72675461-72675480 | MS.gene98561:intron | 35.0% |
| ! | CATCAAAGACTGATTCTAAG+AGG | - | chr5.2:72671467-72671486 | None:intergenic | 35.0% |
| ! | CATTGAAACTGAAGCATTAG+TGG | + | chr5.2:72672324-72672343 | MS.gene98561:intron | 35.0% |
| ! | GACCAAAGTGCTAGATATAA+TGG | + | chr5.2:72671787-72671806 | MS.gene98561:CDS | 35.0% |
| !! | ACCATCGTTTTTACTTCCAT+CGG | + | chr5.2:72675779-72675798 | MS.gene98561:intron | 35.0% |
| !! | AGTTTGTTCTTTTACCTTGC+AGG | + | chr5.2:72675714-72675733 | MS.gene98561:intron | 35.0% |
| !! | CACTCAGATTCTGAAACAAT+AGG | - | chr5.2:72675855-72675874 | None:intergenic | 35.0% |
| !! | GCTGACTTTTGTTTCAAAAG+TGG | + | chr5.2:72675001-72675020 | MS.gene98561:intron | 35.0% |
| !! | TTGGTGTTCTTTTGCAACAT+TGG | - | chr5.2:72674220-72674239 | None:intergenic | 35.0% |
| !!! | GCAAGTTGTTTTAGACTTGT+TGG | - | chr5.2:72673799-72673818 | None:intergenic | 35.0% |
| AAGAATGACAAGGGTTCTGT+AGG | + | chr5.2:72675155-72675174 | MS.gene98561:intron | 40.0% | |
| AAGCATTAGTGGTAATTGGC+GGG | + | chr5.2:72672335-72672354 | MS.gene98561:intron | 40.0% | |
| AAGTTGTGTTGTCCAAGCAT+TGG | - | chr5.2:72671897-72671916 | None:intergenic | 40.0% | |
| AATGGAAGAGCTCAAGAGAA+AGG | + | chr5.2:72673302-72673321 | MS.gene98561:CDS | 40.0% | |
| ACAAAGGCTGCTTCATCTAA+GGG | + | chr5.2:72675052-72675071 | MS.gene98561:intron | 40.0% | |
| ACATGAGAGCAAGAATGACA+AGG | + | chr5.2:72675145-72675164 | MS.gene98561:intron | 40.0% | |
| ACTTCAACAGCTAACACTGT+AGG | - | chr5.2:72676605-72676624 | None:intergenic | 40.0% | |
| AGTGTTGCAACACAAATCCA+TGG | - | chr5.2:72672433-72672452 | None:intergenic | 40.0% | |
| ATCACGCACTCATCAAATAG+TGG | - | chr5.2:72674652-72674671 | None:intergenic | 40.0% | |
| CAAAAGTTTCGGTAAGCCTT+AGG | + | chr5.2:72674038-72674057 | MS.gene98561:CDS | 40.0% | |
| CAAAGCCTGTTCATGTTTAC+AGG | + | chr5.2:72672737-72672756 | MS.gene98561:CDS | 40.0% | |
| CACGAGCTTTCTTTCCAAAA+AGG | - | chr5.2:72675478-72675497 | None:intergenic | 40.0% | |
| CATGAGAGCAAGAATGACAA+GGG | + | chr5.2:72675146-72675165 | MS.gene98561:intron | 40.0% | |
| GAACACTCACAATCTCATTG+AGG | + | chr5.2:72673879-72673898 | MS.gene98561:intron | 40.0% | |
| GAGAACATCCTGCATCAAAT+TGG | - | chr5.2:72671389-72671408 | None:intergenic | 40.0% | |
| GAGCTTTCTTTCCAAAAAGG+TGG | - | chr5.2:72675475-72675494 | None:intergenic | 40.0% | |
| GATCGCAATGAACATCAAAG+TGG | + | chr5.2:72675338-72675357 | MS.gene98561:intron | 40.0% | |
| GATTCTGTGACATCTATCCA+TGG | - | chr5.2:72672710-72672729 | None:intergenic | 40.0% | |
| GCACAAGAAGAAGGTTTGAA+AGG | - | chr5.2:72676024-72676043 | None:intergenic | 40.0% | |
| GGACAACTAATGAAGATCTG+AGG | + | chr5.2:72673990-72674009 | MS.gene98561:CDS | 40.0% | |
| GGAGAAGGTAATAAATGGAG+AGG | + | chr5.2:72673505-72673524 | MS.gene98561:intron | 40.0% | |
| GTAAATCCACTTGAGGATTC+TGG | - | chr5.2:72672684-72672703 | None:intergenic | 40.0% | |
| GTATTGTGCCAATTTGATGC+AGG | + | chr5.2:72671378-72671397 | MS.gene98561:intron | 40.0% | |
| TACAAAGGCTGCTTCATCTA+AGG | + | chr5.2:72675051-72675070 | MS.gene98561:intron | 40.0% | |
| TCAAACCTTCTTCTTGTGCT+TGG | + | chr5.2:72676025-72676044 | MS.gene98561:CDS | 40.0% | |
| TCAACATCCGACCCTATAAA+AGG | - | chr5.2:72672820-72672839 | None:intergenic | 40.0% | |
| TCTAGGAAGTTTGCAAAGCA+TGG | + | chr5.2:72672885-72672904 | MS.gene98561:intron | 40.0% | |
| TGAAGCTGGATGATAGGAAA+CGG | + | chr5.2:72671861-72671880 | MS.gene98561:CDS | 40.0% | |
| TGAATTTGGGAATTCCTGCA+AGG | - | chr5.2:72675731-72675750 | None:intergenic | 40.0% | |
| TGATAGCAATTAGCAAAGGC+AGG | - | chr5.2:72671743-72671762 | None:intergenic | 40.0% | |
| TGCCTTTGCTAATTGCTATC+AGG | + | chr5.2:72671742-72671761 | MS.gene98561:intron | 40.0% | |
| TGCGCTTAGCAGTAATAAGA+CGG | - | chr5.2:72676484-72676503 | None:intergenic | 40.0% | |
| TGTAAATGAGAAACAGCTGC+AGG | + | chr5.2:72676544-72676563 | MS.gene98561:CDS | 40.0% | |
| TTGCAGACACAGATTATGGT+TGG | + | chr5.2:72673276-72673295 | MS.gene98561:intron | 40.0% | |
| TTGCTTGCAGACACAGATTA+TGG | + | chr5.2:72673272-72673291 | MS.gene98561:intron | 40.0% | |
| TTGGACAAGAAACGATCGAT+TGG | + | chr5.2:72671254-72671273 | MS.gene98561:CDS | 40.0% | |
| TTTGCAAAGCATGGCATATG+CGG | + | chr5.2:72672894-72672913 | MS.gene98561:intron | 40.0% | |
| ! | AAGACTGATTCTAAGAGGTC+AGG | - | chr5.2:72671462-72671481 | None:intergenic | 40.0% |
| ! | AAGGAGCTTTAGCACAAACT+AGG | + | chr5.2:72673113-72673132 | MS.gene98561:CDS | 40.0% |
| ! | AGGCTAAGAGGAGATTTTTG+TGG | + | chr5.2:72672224-72672243 | MS.gene98561:intron | 40.0% |
| ! | ATACGGTCCTTTTATAGGGT+CGG | + | chr5.2:72672810-72672829 | MS.gene98561:intron | 40.0% |
| ! | GAAGCATTAGTGGTAATTGG+CGG | + | chr5.2:72672334-72672353 | MS.gene98561:intron | 40.0% |
| ! | GAATCCTCAAGTGGATTTAC+AGG | + | chr5.2:72672684-72672703 | MS.gene98561:intron | 40.0% |
| ! | GCAAAATCATTGGTTGAGAG+AGG | - | chr5.2:72674145-72674164 | None:intergenic | 40.0% |
| !! | CATATTTTTGCTCCACTCCA+AGG | - | chr5.2:72676081-72676100 | None:intergenic | 40.0% |
| !! | CATCGTTTTTACTTCCATCG+GGG | + | chr5.2:72675781-72675800 | MS.gene98561:intron | 40.0% |
| !! | CCATCGTTTTTACTTCCATC+GGG | + | chr5.2:72675780-72675799 | MS.gene98561:intron | 40.0% |
| !! | CTTTTTGGAAAGAAAGCTCG+TGG | + | chr5.2:72675476-72675495 | MS.gene98561:intron | 40.0% |
| AAAAGGGTTTCGAAGTTCGC+AGG | + | chr5.2:72671825-72671844 | MS.gene98561:CDS | 45.0% | |
| AATGAGAAACAGCTGCAGGA+AGG | + | chr5.2:72676548-72676567 | MS.gene98561:CDS | 45.0% | |
| AATGCCACCACAAAGTAGAG+AGG | - | chr5.2:72676053-72676072 | None:intergenic | 45.0% | |
| ACGCACTCATCAAATAGTGG+AGG | - | chr5.2:72674649-72674668 | None:intergenic | 45.0% | |
| AGCATTAGTGGTAATTGGCG+GGG | + | chr5.2:72672336-72672355 | MS.gene98561:intron | 45.0% | |
| AGGTTCCAAGCACAAGAAGA+AGG | - | chr5.2:72676033-72676052 | None:intergenic | 45.0% | |
| ATGGCCTGTAAATCCACTTG+AGG | - | chr5.2:72672691-72672710 | None:intergenic | 45.0% | |
| CACAACACCTAAAGGCTAAG+AGG | + | chr5.2:72672212-72672231 | MS.gene98561:intron | 45.0% | |
| CCCGATGGAAGTAAAAACGA+TGG | - | chr5.2:72675783-72675802 | None:intergenic | 45.0% | |
| CTAACACTGTAGGAGGATCA+TGG | - | chr5.2:72676595-72676614 | None:intergenic | 45.0% | |
| CTTGGAACCTCTCTACTTTG+TGG | + | chr5.2:72676043-72676062 | MS.gene98561:CDS | 45.0% | |
| CTTTAGCACAAACTAGGCAG+AGG | + | chr5.2:72673119-72673138 | MS.gene98561:CDS | 45.0% | |
| GAAGCTTGCACAACACCTAA+AGG | + | chr5.2:72672204-72672223 | MS.gene98561:intron | 45.0% | |
| GAGACACTGGGGGAAATATT+TGG | + | chr5.2:72671235-72671254 | MS.gene98561:CDS | 45.0% | |
| GAGAGCCTGTAAACATGAAC+AGG | - | chr5.2:72672745-72672764 | None:intergenic | 45.0% | |
| GCCACAAAAAGGAAGCAGAA+AGG | - | chr5.2:72671700-72671719 | None:intergenic | 45.0% | |
| GCTATTTGCACGGAATCACA+AGG | + | chr5.2:72671649-72671668 | MS.gene98561:CDS | 45.0% | |
| GGAAAGTCTTAAGGGAAGTG+CGG | + | chr5.2:72675359-72675378 | MS.gene98561:intron | 45.0% | |
| TCAACAGCTAACACTGTAGG+AGG | - | chr5.2:72676602-72676621 | None:intergenic | 45.0% | |
| TCAATTGCTTGACCGATTGC+TGG | + | chr5.2:72671622-72671641 | MS.gene98561:CDS | 45.0% | |
| TGTACTCCAGAATCCTCAAG+TGG | + | chr5.2:72672675-72672694 | MS.gene98561:intron | 45.0% | |
| TTAGAGATGCGACACCAATG+AGG | - | chr5.2:72674562-72674581 | None:intergenic | 45.0% | |
| TTCGAAGTTCGCAGGATTGA+TGG | + | chr5.2:72671833-72671852 | MS.gene98561:CDS | 45.0% | |
| TTCTGATCTTCAGTCAGCAG+TGG | + | chr5.2:72671765-72671784 | MS.gene98561:CDS | 45.0% | |
| ! | AGTTCGCAGGATTGATGGTT+CGG | + | chr5.2:72671838-72671857 | MS.gene98561:CDS | 45.0% |
| ! | CTGATTCTAAGAGGTCAGGA+TGG | - | chr5.2:72671458-72671477 | None:intergenic | 45.0% |
| ! | GCCTTTCTGCTTCCTTTTTG+TGG | + | chr5.2:72671696-72671715 | MS.gene98561:intron | 45.0% |
| ! | TCAAGTGGATTTACAGGCCA+TGG | + | chr5.2:72672690-72672709 | MS.gene98561:CDS | 45.0% |
| !!! | TTTGTTATTATATTTTAAAT+TGG | + | chr5.2:72674498-72674517 | MS.gene98561:intron | 5.0% |
| AACCCACATAGCTGACAGTG+AGG | - | chr5.2:72671340-72671359 | None:intergenic | 50.0% | |
| ACCCACATAGCTGACAGTGA+GGG | - | chr5.2:72671339-72671358 | None:intergenic | 50.0% | |
| ACCCTCACTGTCAGCTATGT+GGG | + | chr5.2:72671335-72671354 | MS.gene98561:intron | 50.0% | |
| AGCACAAACTAGGCAGAGGA+AGG | + | chr5.2:72673123-72673142 | MS.gene98561:CDS | 50.0% | |
| AGCTGGATGATAGGAAACGG+AGG | + | chr5.2:72671864-72671883 | MS.gene98561:CDS | 50.0% | |
| ATGTTGCAGGAACGCCATCT+TGG | + | chr5.2:72673729-72673748 | MS.gene98561:intron | 50.0% | |
| CAAATAGCCGCTCCAGCAAT+CGG | - | chr5.2:72671637-72671656 | None:intergenic | 50.0% | |
| GCATATGCGGAGTGAGCAAA+AGG | + | chr5.2:72672907-72672926 | MS.gene98561:intron | 50.0% | |
| GCATTAGTGGTAATTGGCGG+GGG | + | chr5.2:72672337-72672356 | MS.gene98561:intron | 50.0% | |
| GCTGGATGATAGGAAACGGA+GGG | + | chr5.2:72671865-72671884 | MS.gene98561:CDS | 50.0% | |
| GGAACCTCTCTACTTTGTGG+TGG | + | chr5.2:72676046-72676065 | MS.gene98561:CDS | 50.0% | |
| GGTGTAGATGAGTAGCAGCT+TGG | - | chr5.2:72671722-72671741 | None:intergenic | 50.0% | |
| GTAGCAGCTTGGCCACAAAA+AGG | - | chr5.2:72671711-72671730 | None:intergenic | 50.0% | |
| GTTGAAGCTTGAGCATGTGC+AGG | + | chr5.2:72672856-72672875 | MS.gene98561:intron | 50.0% | |
| TGGCATTGCAAACCTTGGAG+TGG | + | chr5.2:72676066-72676085 | MS.gene98561:CDS | 50.0% | |
| TGTGGTGGCATTGCAAACCT+TGG | + | chr5.2:72676061-72676080 | MS.gene98561:CDS | 50.0% | |
| ! | GAAGCAGAAAGGCACAAGCA+TGG | - | chr5.2:72671689-72671708 | None:intergenic | 50.0% |
| ! | GTTCGGTGAAGCTGGATGAT+AGG | + | chr5.2:72671855-72671874 | MS.gene98561:CDS | 50.0% |
| ! | TTTCGTGTGAAGTACCCCGA+TGG | - | chr5.2:72675798-72675817 | None:intergenic | 50.0% |
| !! | GATTGATGGTTCGGTGAAGC+TGG | + | chr5.2:72671847-72671866 | MS.gene98561:CDS | 50.0% |
| CACCCTCACTGTCAGCTATG+TGG | + | chr5.2:72671334-72671353 | MS.gene98561:intron | 55.0% | |
| CGCTACTGCACGATCAGTAG+AGG | + | chr5.2:72672764-72672783 | MS.gene98561:CDS | 55.0% | |
| GAAGTCCTGGATCTGCTCGT+TGG | - | chr5.2:72672557-72672576 | None:intergenic | 55.0% | |
| GCATGTGCAGGATGAGCTCT+AGG | + | chr5.2:72672868-72672887 | MS.gene98561:intron | 55.0% | |
| GGAGGGTCTGTACCAATGCT+TGG | + | chr5.2:72671882-72671901 | MS.gene98561:CDS | 55.0% | |
| TGCTGGAGCGGCTATTTGCA+CGG | + | chr5.2:72671639-72671658 | MS.gene98561:CDS | 55.0% | |
| TGCTTGACCGATTGCTGGAG+CGG | + | chr5.2:72671627-72671646 | MS.gene98561:CDS | 55.0% | |
| GTCCTGGATCTGCTCGTTGG+CGG | - | chr5.2:72672554-72672573 | None:intergenic | 60.0% | |
| TTCCGCCAACGAGCAGATCC+AGG | + | chr5.2:72672549-72672568 | MS.gene98561:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 72671233 | 72676649 | 72671233 | ID=MS.gene98561 |
| chr5.2 | mRNA | 72671233 | 72676649 | 72671233 | ID=MS.gene98561.t1;Parent=MS.gene98561 |
| chr5.2 | exon | 72671233 | 72671275 | 72671233 | ID=MS.gene98561.t1.exon1;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72671233 | 72671275 | 72671233 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| chr5.2 | exon | 72671400 | 72671492 | 72671400 | ID=MS.gene98561.t1.exon2;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72671400 | 72671492 | 72671400 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| chr5.2 | exon | 72671576 | 72671670 | 72671576 | ID=MS.gene98561.t1.exon3;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72671576 | 72671670 | 72671576 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| chr5.2 | exon | 72671764 | 72671933 | 72671764 | ID=MS.gene98561.t1.exon4;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72671764 | 72671933 | 72671764 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| chr5.2 | exon | 72672685 | 72672785 | 72672685 | ID=MS.gene98561.t1.exon5;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72672685 | 72672785 | 72672685 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| chr5.2 | exon | 72673056 | 72673144 | 72673056 | ID=MS.gene98561.t1.exon6;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72673056 | 72673144 | 72673056 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| chr5.2 | exon | 72673282 | 72673323 | 72673282 | ID=MS.gene98561.t1.exon7;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72673282 | 72673323 | 72673282 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| chr5.2 | exon | 72673738 | 72673772 | 72673738 | ID=MS.gene98561.t1.exon8;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72673738 | 72673772 | 72673738 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| chr5.2 | exon | 72673982 | 72674059 | 72673982 | ID=MS.gene98561.t1.exon9;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72673982 | 72674059 | 72673982 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| chr5.2 | exon | 72674313 | 72674344 | 72674313 | ID=MS.gene98561.t1.exon10;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72674313 | 72674344 | 72674313 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| chr5.2 | exon | 72674742 | 72674798 | 72674742 | ID=MS.gene98561.t1.exon11;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72674742 | 72674798 | 72674742 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| chr5.2 | exon | 72676014 | 72676105 | 72676014 | ID=MS.gene98561.t1.exon12;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72676014 | 72676105 | 72676014 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| chr5.2 | exon | 72676392 | 72676649 | 72676392 | ID=MS.gene98561.t1.exon13;Parent=MS.gene98561.t1 |
| chr5.2 | CDS | 72676392 | 72676649 | 72676392 | ID=cds.MS.gene98561.t1;Parent=MS.gene98561.t1 |
| Gene Sequence |
| Protein sequence |
