AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080049020.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080049020.01.T01 MTR_3g045720 97.093 172 4 1 7 178 13 183 4.66e-122 345
MsG0080049020.01.T01 MTR_1g015770 27.014 211 135 7 30 233 329 527 3.26e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080049020.01.T01 AT2G26810 61.181 237 84 3 20 256 20 248 4.25e-101 295
MsG0080049020.01.T01 AT2G26810 61.181 237 84 3 20 256 20 248 4.25e-101 295
MsG0080049020.01.T01 AT2G26810 65.089 169 56 3 20 188 20 185 2.90e-75 228
MsG0080049020.01.T01 AT2G26810 65.089 169 56 3 20 188 20 185 2.90e-75 228
MsG0080049020.01.T01 AT2G26810 65.089 169 56 3 20 188 20 185 2.90e-75 228
MsG0080049020.01.T01 AT2G26810 62.733 161 58 2 28 188 35 193 2.01e-68 211
MsG0080049020.01.T01 AT2G26810 62.733 161 58 2 28 188 35 193 2.01e-68 211
MsG0080049020.01.T01 AT1G08125 28.947 190 109 10 61 240 35 208 1.53e-12 66.6
MsG0080049020.01.T01 AT1G08125 28.947 190 109 10 61 240 42 215 1.70e-12 66.6

Find 6 sgRNAs with CRISPR-Local

Find 637 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTCTTTCTACGACGCTT+TGG 0.413908 contig612end:+19536 MsG0080049020.01.T01:intergenic
AGAAAACAAAGGATTGCAAA+AGG 0.496450 contig612end:-19518 MsG0080049020.01.T01:exon
ATTTCTAACTTCTGTAAACA+AGG 0.515003 contig612end:+19568 MsG0080049020.01.T01:intergenic
AGGATTGCAAAAGGAAGAAG+AGG 0.555089 contig612end:-19509 MsG0080049020.01.T01:exon
TTTCTAACTTCTGTAAACAA+GGG 0.615345 contig612end:+19569 MsG0080049020.01.T01:intergenic
GTCGTAGAAAGAGAAAACAA+AGG 0.692171 contig612end:-19529 MsG0080049020.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - contig612end:13549-13568 MsG0080049020.01.T01:intron 0.0%
!! ATATATATATATATATATAT+AGG + contig612end:13568-13549 MsG0080049020.01.T01:intergenic 0.0%
!! TATATATATATATATATATA+GGG - contig612end:13548-13567 MsG0080049020.01.T01:intron 0.0%
!! TATATATATATATATATATA+GGG + contig612end:13567-13548 MsG0080049020.01.T01:intergenic 0.0%
!!! TTTTTTTATTAAAATTTTAA+TGG - contig612end:15027-15046 MsG0080049020.01.T01:intron 0.0%
!! ATTAATATATACAATAACAA+TGG - contig612end:13185-13204 MsG0080049020.01.T01:intron 10.0%
!! TTCTACAAAAAAAAAAAAAA+AGG - contig612end:12514-12533 MsG0080049020.01.T01:intron 10.0%
!!! ATTCTTTTGAATTAAATTAT+TGG + contig612end:12096-12115 MsG0080049020.01.T01:intergenic 10.0%
!!! GATAGTATTTTATTTTTATT+TGG + contig612end:10557-10576 MsG0080049020.01.T01:intergenic 10.0%
!!! GTTAAGATTTTTTATAAAAA+TGG - contig612end:14058-14077 MsG0080049020.01.T01:intron 10.0%
!!! TAAAGTTCTAAATAAAAAAA+TGG + contig612end:12917-12936 MsG0080049020.01.T01:intergenic 10.0%
!!! TTCTTTTGAATTAAATTATT+GGG + contig612end:12095-12114 MsG0080049020.01.T01:intergenic 10.0%
!!! TTTTATTTTTTAAATAGTGT+TGG - contig612end:15126-15145 MsG0080049020.01.T01:intron 10.0%
!!! TTTTTTATTTAGAACTTTAA+TGG - contig612end:12918-12937 MsG0080049020.01.T01:intron 10.0%
!!! TTTTTTTTTTTTATTGATCA+GGG + contig612end:13125-13144 MsG0080049020.01.T01:intergenic 10.0%
!! AACATTATTTGCTTTATATT+GGG - contig612end:11113-11132 MsG0080049020.01.T01:intron 15.0%
!! ACAATAAATAAGTACTTATA+AGG + contig612end:18009-18028 MsG0080049020.01.T01:intergenic 15.0%
!! ATATTTAAATCAAAATTCAG+AGG + contig612end:17559-17578 MsG0080049020.01.T01:intergenic 15.0%
!! CATTAAATTAATATAGTTTG+AGG - contig612end:19433-19452 MsG0080049020.01.T01:intron 15.0%
!! TAAATCTATTATTTGAGAAA+TGG + contig612end:16562-16581 MsG0080049020.01.T01:intergenic 15.0%
!! TATTTAAATCAAAATTCAGA+GGG + contig612end:17558-17577 MsG0080049020.01.T01:intergenic 15.0%
!!! AAATAAATTGAAGATTTTCA+AGG + contig612end:16806-16825 MsG0080049020.01.T01:intergenic 15.0%
!!! AATTTTGTTATTTACTTCTA+CGG + contig612end:16601-16620 MsG0080049020.01.T01:intergenic 15.0%
!!! AGTTTTTTTTTTCTTTCTTT+TGG - contig612end:11676-11695 MsG0080049020.01.T01:intron 15.0%
!!! CTAGTTTTCATTTAAAAAAT+AGG - contig612end:12783-12802 MsG0080049020.01.T01:intron 15.0%
!!! CTTTTTTTTTTTTATTGATC+AGG + contig612end:13126-13145 MsG0080049020.01.T01:intergenic 15.0%
!!! TATTTTTATTTTAGAAGTTG+TGG + contig612end:15910-15929 MsG0080049020.01.T01:intergenic 15.0%
!!! TCTAGTTTCATTAAAAAAAT+AGG - contig612end:14942-14961 MsG0080049020.01.T01:intron 15.0%
!!! TTTGATTTAAATATATATGC+AGG - contig612end:17565-17584 MsG0080049020.01.T01:intron 15.0%
!!! TTTTAATGTTAGATATCAAT+GGG + contig612end:17716-17735 MsG0080049020.01.T01:intergenic 15.0%
!!! TTTTTTTATTTTAGAAGTTG+TGG + contig612end:13814-13833 MsG0080049020.01.T01:intergenic 15.0%
!! AAAAAACTGATATTGAAAAC+CGG + contig612end:12682-12701 MsG0080049020.01.T01:intergenic 20.0%
!! AAATCTATTTGTATAACACA+TGG - contig612end:17373-17392 MsG0080049020.01.T01:intron 20.0%
!! AAATGTATACAAATCAGTAA+GGG - contig612end:13162-13181 MsG0080049020.01.T01:intron 20.0%
!! AACCAGATTACATAAAAAAT+TGG + contig612end:12635-12654 MsG0080049020.01.T01:intergenic 20.0%
!! AACGAAAAATGATTCATATA+TGG - contig612end:18953-18972 MsG0080049020.01.T01:intron 20.0%
!! AATGAATCTATTGAAAAAGA+GGG + contig612end:14368-14387 MsG0080049020.01.T01:intergenic 20.0%
!! ACAATAAGTAAGTATATTGA+AGG + contig612end:17977-17996 MsG0080049020.01.T01:intergenic 20.0%
!! ATAAAAATGGTCAAAGAAAA+TGG - contig612end:14071-14090 MsG0080049020.01.T01:intron 20.0%
!! ATCTTGTTAATTCTTCTTAA+TGG - contig612end:10949-10968 MsG0080049020.01.T01:intron 20.0%
!! ATGTCATGAACAAAATATAT+TGG - contig612end:13352-13371 MsG0080049020.01.T01:intron 20.0%
!! ATGTTCCCTATATATATATA+GGG + contig612end:13558-13577 MsG0080049020.01.T01:intergenic 20.0%
!! ATTTATAACTGTGAATCAAT+TGG + contig612end:11447-11466 MsG0080049020.01.T01:intergenic 20.0%
!! CAACATTATTTGCTTTATAT+TGG - contig612end:11112-11131 MsG0080049020.01.T01:intron 20.0%
!! CAATATAAAGCAAATAATGT+TGG + contig612end:11114-11133 MsG0080049020.01.T01:intergenic 20.0%
!! CTAAAAACTAATATTACATG+TGG - contig612end:12969-12988 MsG0080049020.01.T01:intron 20.0%
!! CTATTAACCAGTTTAAATAA+CGG - contig612end:12707-12726 MsG0080049020.01.T01:intron 20.0%
!! GAAATGTAAAAAAAACTTAC+TGG + contig612end:10305-10324 MsG0080049020.01.T01:intergenic 20.0%
!! GGGATTATTAATACATAATA+AGG + contig612end:17696-17715 MsG0080049020.01.T01:intergenic 20.0%
!! GTCATGAACAATATATATTT+GGG - contig612end:15460-15479 MsG0080049020.01.T01:intron 20.0%
!! TAAAAATGGTCAAAGAAAAT+GGG - contig612end:14072-14091 MsG0080049020.01.T01:intron 20.0%
!! TAAATCGTGGATAAAAAAAT+TGG - contig612end:13884-13903 MsG0080049020.01.T01:intron 20.0%
!! TAAGGAAAACCTATATATAT+GGG + contig612end:16472-16491 MsG0080049020.01.T01:intergenic 20.0%
!! TAAGTTAAATAGAGTCTAAT+TGG - contig612end:13313-13332 MsG0080049020.01.T01:intron 20.0%
!! TAATGAATCTATTGAAAAAG+AGG + contig612end:14369-14388 MsG0080049020.01.T01:intergenic 20.0%
!! TATGTTCCCTATATATATAT+AGG + contig612end:13559-13578 MsG0080049020.01.T01:intergenic 20.0%
!! TCATGAACAATATATATTTG+GGG - contig612end:15461-15480 MsG0080049020.01.T01:intron 20.0%
!! TGAGAAAATAAGAAAGAATA+GGG - contig612end:12136-12155 MsG0080049020.01.T01:CDS 20.0%
!! TGTCATGAACAAAATATATT+GGG - contig612end:13353-13372 MsG0080049020.01.T01:intron 20.0%
!! TGTCATGAACAATATATATT+TGG - contig612end:15459-15478 MsG0080049020.01.T01:intron 20.0%
!! TTAAGAAGAATTAACAAGAT+AGG + contig612end:10949-10968 MsG0080049020.01.T01:intergenic 20.0%
!! TTGAAACTGGTTATTTAAAT+TGG + contig612end:12746-12765 MsG0080049020.01.T01:intergenic 20.0%
!! TTGAAATTTCGATATATTGA+GGG + contig612end:17876-17895 MsG0080049020.01.T01:intergenic 20.0%
!! TTGAGAAAATAAGAAAGAAT+AGG - contig612end:12135-12154 MsG0080049020.01.T01:CDS 20.0%
!! TTTATAACTGTGAATCAATT+GGG + contig612end:11446-11465 MsG0080049020.01.T01:intergenic 20.0%
!!! AAAAAACTGATAATGAATAC+TGG + contig612end:14843-14862 MsG0080049020.01.T01:intergenic 20.0%
!!! AAATGGATTTCATTTAGAAA+TGG - contig612end:14762-14781 MsG0080049020.01.T01:intron 20.0%
!!! AAATGGATTTTGTTTAGAAA+TGG - contig612end:12602-12621 MsG0080049020.01.T01:intron 20.0%
!!! AACCAATTTTTTATGTAATC+TGG - contig612end:12630-12649 MsG0080049020.01.T01:intron 20.0%
!!! AATTTTTGTTTATCTCTTCT+TGG - contig612end:18634-18653 MsG0080049020.01.T01:intron 20.0%
!!! ACTGATTTTTTTATGTAATC+TGG - contig612end:14791-14810 MsG0080049020.01.T01:intron 20.0%
!!! AGACAAAAAATGACTATTTT+AGG + contig612end:10844-10863 MsG0080049020.01.T01:intergenic 20.0%
!!! AGCTTTTATATAAACTTGAA+TGG - contig612end:11595-11614 MsG0080049020.01.T01:intron 20.0%
!!! AGTTCATTTTAGCAAATAAT+TGG + contig612end:18307-18326 MsG0080049020.01.T01:intergenic 20.0%
!!! CTGTAGTTCATTATATTTTT+GGG - contig612end:18888-18907 MsG0080049020.01.T01:intron 20.0%
!!! GACAAAAAATGACTATTTTA+GGG + contig612end:10843-10862 MsG0080049020.01.T01:intergenic 20.0%
!!! GATGTTTTTGTAAAATTTCA+TGG + contig612end:17633-17652 MsG0080049020.01.T01:intergenic 20.0%
!!! GCTTTTATATAAACTTGAAT+GGG - contig612end:11596-11615 MsG0080049020.01.T01:intron 20.0%
!!! GTTTATACTTTTTATGATTG+TGG - contig612end:11886-11905 MsG0080049020.01.T01:intron 20.0%
!!! GTTTTAATGTTAGATATCAA+TGG + contig612end:17717-17736 MsG0080049020.01.T01:intergenic 20.0%
!!! TAACGAAATATTTTAATGTC+AGG + contig612end:17938-17957 MsG0080049020.01.T01:intergenic 20.0%
!!! TATAACACAATTAGTTCTTT+TGG + contig612end:16940-16959 MsG0080049020.01.T01:intergenic 20.0%
!!! TGTAATCTGGTTTTAAAAAA+TGG - contig612end:14804-14823 MsG0080049020.01.T01:intron 20.0%
!!! TGTGTTTTTTTGTTTTAGTT+TGG - contig612end:14216-14235 MsG0080049020.01.T01:intron 20.0%
!!! TTACTGATTTGTATACATTT+CGG + contig612end:13162-13181 MsG0080049020.01.T01:intergenic 20.0%
!!! TTGCGTGATTTTTTTTTTTT+TGG + contig612end:13711-13730 MsG0080049020.01.T01:intergenic 20.0%
!!! TTTGAAATTTCGATATATTG+AGG + contig612end:17877-17896 MsG0080049020.01.T01:intergenic 20.0%
!!! TTTGCGTGATTTTTTTTTTT+TGG + contig612end:13712-13731 MsG0080049020.01.T01:intergenic 20.0%
!!! TTTTTTTTTGGAATAATGTG+TGG + contig612end:13699-13718 MsG0080049020.01.T01:intergenic 20.0%
! AAAAAAAAAATCACGCAAAC+TGG - contig612end:13713-13732 MsG0080049020.01.T01:intron 25.0%
! AAATGAAACAAACCTGTTTA+TGG - contig612end:12485-12504 MsG0080049020.01.T01:intron 25.0%
! AAGAACTAATTGTGTTATAC+TGG - contig612end:16941-16960 MsG0080049020.01.T01:intron 25.0%
! AAGAGAAATCAATACAAAAG+AGG - contig612end:16195-16214 MsG0080049020.01.T01:intron 25.0%
! AATAGCTTAAGAAAAGTAAC+TGG + contig612end:10580-10599 MsG0080049020.01.T01:intergenic 25.0%
! AATATTAGTCCTACTTCTAA+TGG - contig612end:17491-17510 MsG0080049020.01.T01:intron 25.0%
! AATCATTTGTACAAAACAGA+AGG + contig612end:12877-12896 MsG0080049020.01.T01:intergenic 25.0%
! AGTAATATCTAAGCAAATGA+GGG - contig612end:11306-11325 MsG0080049020.01.T01:intron 25.0%
! AGTAATGACTCTATTGAAAA+AGG + contig612end:12189-12208 MsG0080049020.01.T01:intergenic 25.0%
! ATAAGAGAAAGTAACAACAT+AGG + contig612end:14496-14515 MsG0080049020.01.T01:intergenic 25.0%
! ATACAGAAAGCAAAAAATCA+AGG + contig612end:11651-11670 MsG0080049020.01.T01:intergenic 25.0%
! ATAGCTTAAGAAAAGTAACT+GGG + contig612end:10579-10598 MsG0080049020.01.T01:intergenic 25.0%
! ATATAGGATTAGGAGTTAAT+TGG + contig612end:12300-12319 MsG0080049020.01.T01:intergenic 25.0%
! ATCATTTGTACAAAACAGAA+GGG + contig612end:12876-12895 MsG0080049020.01.T01:intergenic 25.0%
! ATTTCTAACTTCTGTAAACA+AGG + contig612end:10025-10044 MsG0080049020.01.T01:intergenic 25.0%
! ATTTGTGATTTATGGTAACA+AGG + contig612end:13217-13236 MsG0080049020.01.T01:intergenic 25.0%
! CAATGTAATCATAATCTGTT+AGG - contig612end:12067-12086 MsG0080049020.01.T01:intron 25.0%
! CACAATAACTCTTTCATATA+GGG + contig612end:18041-18060 MsG0080049020.01.T01:intergenic 25.0%
! CAGATTATGATTACATTGAT+AGG + contig612end:12065-12084 MsG0080049020.01.T01:intergenic 25.0%
! CATAAAACTGATATTGAAAC+TGG + contig612end:14919-14938 MsG0080049020.01.T01:intergenic 25.0%
! CATAAAAGTAACATTGAAAC+TGG + contig612end:12759-12778 MsG0080049020.01.T01:intergenic 25.0%
! CCAAGGAAATAAAATTTACT+TGG - contig612end:11364-11383 MsG0080049020.01.T01:intron 25.0%
! CGAAAAACTAATATTACATG+TGG - contig612end:15079-15098 MsG0080049020.01.T01:intron 25.0%
! CTAAATAGTTCATGATTAAG+TGG + contig612end:15057-15076 MsG0080049020.01.T01:intergenic 25.0%
! CTATTAACCAGTTTAAATGA+CGG - contig612end:14867-14886 MsG0080049020.01.T01:intron 25.0%
! GAAATGTATACAAATCAGTA+AGG - contig612end:13161-13180 MsG0080049020.01.T01:intron 25.0%
! GTAAGGAAAACCTATATATA+TGG + contig612end:16473-16492 MsG0080049020.01.T01:intergenic 25.0%
! GTAATGACTCTATTGAAAAA+GGG + contig612end:12188-12207 MsG0080049020.01.T01:intergenic 25.0%
! GTCATGAACAAAATATATTG+GGG - contig612end:13354-13373 MsG0080049020.01.T01:intron 25.0%
! TAATGACTCTATTGAAAAAG+GGG + contig612end:12187-12206 MsG0080049020.01.T01:intergenic 25.0%
! TACAAAACATGAAATCTTGT+AGG - contig612end:16694-16713 MsG0080049020.01.T01:intron 25.0%
! TAGTAATATCTAAGCAAATG+AGG - contig612end:11305-11324 MsG0080049020.01.T01:intron 25.0%
! TATAGGATTAGGAGTTAATT+GGG + contig612end:12299-12318 MsG0080049020.01.T01:intergenic 25.0%
! TCAATACAAAAGAGGAATAA+AGG - contig612end:16203-16222 MsG0080049020.01.T01:intron 25.0%
! TCACAATAACTCTTTCATAT+AGG + contig612end:18042-18061 MsG0080049020.01.T01:intergenic 25.0%
! TGAACATTTACCCTAAATTT+CGG - contig612end:10901-10920 MsG0080049020.01.T01:intron 25.0%
! TTATGTTAGGATATAGGAAA+AGG + contig612end:14537-14556 MsG0080049020.01.T01:intergenic 25.0%
! TTCAGTTTCTACACAAAAAA+AGG - contig612end:14674-14693 MsG0080049020.01.T01:intron 25.0%
! TTGAAACTGGTTATTTAAAC+TGG + contig612end:14906-14925 MsG0080049020.01.T01:intergenic 25.0%
! TTGCTTAGATATTACTATTG+CGG + contig612end:11302-11321 MsG0080049020.01.T01:intergenic 25.0%
! TTGGATAAAAATACACAGAT+CGG + contig612end:16390-16409 MsG0080049020.01.T01:intergenic 25.0%
! TTGTTAGGATTTGAATTGTT+TGG + contig612end:12349-12368 MsG0080049020.01.T01:intergenic 25.0%
! TTTCTAACTTCTGTAAACAA+GGG + contig612end:10024-10043 MsG0080049020.01.T01:intergenic 25.0%
!! AAAACTGCTTAATTTTTCTG+AGG - contig612end:13239-13258 MsG0080049020.01.T01:intron 25.0%
!! AGTTTTCAATTTGTGATCTA+TGG + contig612end:15330-15349 MsG0080049020.01.T01:intergenic 25.0%
!! ATTTTCTGTGTCTTTATAAC+TGG - contig612end:11623-11642 MsG0080049020.01.T01:intron 25.0%
!! CAATTTGTAGGTTGAAAATT+GGG - contig612end:15960-15979 MsG0080049020.01.T01:intron 25.0%
!! CCTTCTTATTTGTAAAACTA+GGG + contig612end:11937-11956 MsG0080049020.01.T01:intergenic 25.0%
!! CTTCTTATTTGTAAAACTAG+GGG + contig612end:11936-11955 MsG0080049020.01.T01:intergenic 25.0%
!! GAAATTTTACAAAAACATCC+TGG - contig612end:17634-17653 MsG0080049020.01.T01:intron 25.0%
!! GCTGTAGTTCATTATATTTT+TGG - contig612end:18887-18906 MsG0080049020.01.T01:intron 25.0%
!! GTGGCATAATATTGTATTTT+TGG - contig612end:17108-17127 MsG0080049020.01.T01:intron 25.0%
!! TATTTGCTAAAATGAACTAG+AGG - contig612end:18309-18328 MsG0080049020.01.T01:intron 25.0%
!! TCAATTTGTAGGTTGAAAAT+TGG - contig612end:15959-15978 MsG0080049020.01.T01:intron 25.0%
!! TGCAATGAAGAACTTAATTT+TGG + contig612end:18867-18886 MsG0080049020.01.T01:intergenic 25.0%
!! TTAAATGCCTAAAAGTATGA+TGG - contig612end:17742-17761 MsG0080049020.01.T01:intron 25.0%
!! TTAGTTTGGAATAATGTGTT+AGG - contig612end:14230-14249 MsG0080049020.01.T01:intron 25.0%
!! TTCTTTTGACACAAAACATT+GGG + contig612end:16840-16859 MsG0080049020.01.T01:intergenic 25.0%
!! TTTCTTTTGACACAAAACAT+TGG + contig612end:16841-16860 MsG0080049020.01.T01:intergenic 25.0%
!! TTTTGGTCTCTTAGTTATAT+TGG + contig612end:16923-16942 MsG0080049020.01.T01:intergenic 25.0%
!!! AGTTTTCGATTTGTGATTTA+TGG + contig612end:13225-13244 MsG0080049020.01.T01:intergenic 25.0%
!!! ATAGTGAAACAGTTTTAGTT+TGG + contig612end:11338-11357 MsG0080049020.01.T01:intergenic 25.0%
!!! ATCTGTGTATTTTTATCCAA+TGG - contig612end:16390-16409 MsG0080049020.01.T01:intron 25.0%
!!! ATGCACTTTTTTTATTGATC+AGG + contig612end:15230-15249 MsG0080049020.01.T01:intergenic 25.0%
!!! ATTTTCTTCCAAAGTATTAC+TGG - contig612end:12036-12055 MsG0080049020.01.T01:intron 25.0%
!!! CACTTATTTTTTCATGAGAT+TGG - contig612end:19100-19119 MsG0080049020.01.T01:intron 25.0%
!!! CCAAGTAAATTTTATTTCCT+TGG + contig612end:11367-11386 MsG0080049020.01.T01:intergenic 25.0%
!!! CCTAGTTTTACAAATAAGAA+GGG - contig612end:11935-11954 MsG0080049020.01.T01:CDS 25.0%
!!! CTAGTTTTACAAATAAGAAG+GGG - contig612end:11936-11955 MsG0080049020.01.T01:CDS 25.0%
!!! GATTTATAAAACTTGTTGCA+AGG + contig612end:18804-18823 MsG0080049020.01.T01:intergenic 25.0%
!!! GTTTTAGATTATGATGCAAA+CGG - contig612end:13910-13929 MsG0080049020.01.T01:intron 25.0%
!!! TAAACAGGTTTGTTTCATTT+TGG + contig612end:12485-12504 MsG0080049020.01.T01:intergenic 25.0%
!!! TACTGATTTGTATACATTTC+GGG + contig612end:13161-13180 MsG0080049020.01.T01:intergenic 25.0%
!!! TAGCACATATTGCTTTTATA+AGG - contig612end:13027-13046 MsG0080049020.01.T01:intron 25.0%
!!! TAGTTTTACAAATAAGAAGG+GGG - contig612end:11937-11956 MsG0080049020.01.T01:CDS 25.0%
!!! TATCTAAACCAGTTTTAAAC+TGG - contig612end:12811-12830 MsG0080049020.01.T01:intron 25.0%
!!! TGCACTTTTTTTATTGATCA+GGG + contig612end:15229-15248 MsG0080049020.01.T01:intergenic 25.0%
!!! TGTAATCTGGTTTTCAAAAA+TGG - contig612end:12643-12662 MsG0080049020.01.T01:intron 25.0%
!!! TTCATTATATTTTTGGGACT+TGG - contig612end:18894-18913 MsG0080049020.01.T01:intron 25.0%
!!! TTGCAATTTTGATACATTGA+AGG - contig612end:18128-18147 MsG0080049020.01.T01:intron 25.0%
!!! TTTTTTTATGTGTATGCGTA+TGG - contig612end:11215-11234 MsG0080049020.01.T01:intron 25.0%
AAAACATGTTGAGATGTTTC+AGG - contig612end:11792-11811 MsG0080049020.01.T01:intron 30.0%
AAAATGCATAAATGAGAAGC+TGG - contig612end:11571-11590 MsG0080049020.01.T01:intron 30.0%
AAACATGTTGAGATGTTTCA+GGG - contig612end:11793-11812 MsG0080049020.01.T01:intron 30.0%
AAATATATGTGATTCCTCCA+AGG + contig612end:11045-11064 MsG0080049020.01.T01:intergenic 30.0%
AAATGGATACAGATCAGTAA+GGG - contig612end:15261-15280 MsG0080049020.01.T01:intron 30.0%
AAATGGTTTATGCTTCAATC+CGG - contig612end:12660-12679 MsG0080049020.01.T01:intron 30.0%
AACCATCGGATATAAATACA+CGG - contig612end:13633-13652 MsG0080049020.01.T01:intron 30.0%
AAGAATTAACAAGATAGGAG+GGG + contig612end:10944-10963 MsG0080049020.01.T01:intergenic 30.0%
AAGAGAAACCAATACAAAAG+AGG - contig612end:14096-14115 MsG0080049020.01.T01:intron 30.0%
AATGACTCTATTGAAAAAGG+GGG + contig612end:12186-12205 MsG0080049020.01.T01:intergenic 30.0%
ACTAATTGTGTTATACTGGT+TGG - contig612end:16945-16964 MsG0080049020.01.T01:intron 30.0%
AGAAAACAAAGGATTGCAAA+AGG - contig612end:10072-10091 MsG0080049020.01.T01:exon 30.0%
AGAAGAATTAACAAGATAGG+AGG + contig612end:10946-10965 MsG0080049020.01.T01:intergenic 30.0%
AGAAGAGATGGTAACAATAT+AGG + contig612end:12316-12335 MsG0080049020.01.T01:intergenic 30.0%
AGATAGCAATAGATAGTAGT+GGG - contig612end:18740-18759 MsG0080049020.01.T01:intron 30.0%
AGATATGCTCCCATATATAT+AGG - contig612end:16460-16479 MsG0080049020.01.T01:intron 30.0%
AGTTGTAGGATTGAGTAATT+TGG + contig612end:19205-19224 MsG0080049020.01.T01:intergenic 30.0%
ATAAAAATAACGTGTCATCG+TGG + contig612end:16510-16529 MsG0080049020.01.T01:intergenic 30.0%
ATACAAAAGAGGAATAAAGG+AGG - contig612end:14107-14126 MsG0080049020.01.T01:intron 30.0%
ATAGGATTAGGAGTTAATTG+GGG + contig612end:12298-12317 MsG0080049020.01.T01:intergenic 30.0%
ATAGGTTTCCAGTAATACTT+TGG + contig612end:12047-12066 MsG0080049020.01.T01:intergenic 30.0%
ATGCACTCTTCTATTTATAC+AGG - contig612end:14436-14455 MsG0080049020.01.T01:intron 30.0%
ATGCTTAAAATCAAGACCAA+AGG - contig612end:19152-19171 MsG0080049020.01.T01:intron 30.0%
ATTAACAAAGTGCACAATCA+GGG - contig612end:18099-18118 MsG0080049020.01.T01:intron 30.0%
ATTAGGAAAACCTTTCAAAG+AGG + contig612end:11394-11413 MsG0080049020.01.T01:intergenic 30.0%
ATTTACTCACCATTAGAAGT+AGG + contig612end:17503-17522 MsG0080049020.01.T01:intergenic 30.0%
CATTATCATCTCATAGTTGA+TGG - contig612end:18693-18712 MsG0080049020.01.T01:intron 30.0%
CCAATACAAAAGAGGAATAA+AGG - contig612end:14104-14123 MsG0080049020.01.T01:intron 30.0%
CTGAAACAAAGTGTATTGTT+GGG - contig612end:19369-19388 MsG0080049020.01.T01:intron 30.0%
CTGATTAAATAATACTCCTC+TGG - contig612end:18919-18938 MsG0080049020.01.T01:intron 30.0%
GAAAGTAACAACATAGGATA+AGG + contig612end:14490-14509 MsG0080049020.01.T01:intergenic 30.0%
GAAGAATTAACAAGATAGGA+GGG + contig612end:10945-10964 MsG0080049020.01.T01:intergenic 30.0%
GACATATCAATATCAACCAT+CGG - contig612end:13619-13638 MsG0080049020.01.T01:intron 30.0%
GATGGTAACAATATAGGATT+AGG + contig612end:12310-12329 MsG0080049020.01.T01:intergenic 30.0%
GCAAACTATAAACAGAAAAC+TGG + contig612end:17062-17081 MsG0080049020.01.T01:intergenic 30.0%
GGATTTGAATTGTTTGGATT+TGG + contig612end:12343-12362 MsG0080049020.01.T01:intergenic 30.0%
GGTTCTTCATATAGATCTTT+GGG - contig612end:17803-17822 MsG0080049020.01.T01:CDS 30.0%
GTAAATACCTAGATGATCAA+TGG - contig612end:17517-17536 MsG0080049020.01.T01:intron 30.0%
GTAGAAGAACAATTATTGGT+CGG - contig612end:10483-10502 MsG0080049020.01.T01:intron 30.0%
GTATTGAGAAGTCAATTTGT+AGG - contig612end:15948-15967 MsG0080049020.01.T01:intron 30.0%
GTCTAATGTCATACAGAATA+AGG + contig612end:17230-17249 MsG0080049020.01.T01:intergenic 30.0%
GTGTCTGAATTCAAAGAAAT+TGG - contig612end:16741-16760 MsG0080049020.01.T01:intron 30.0%
GTGTGATTATGTTAGGATAT+AGG + contig612end:14543-14562 MsG0080049020.01.T01:intergenic 30.0%
GTTCTTCATATAGATCTTTG+GGG - contig612end:17804-17823 MsG0080049020.01.T01:CDS 30.0%
GTTTGGCATAAAAAAAGGTT+TGG + contig612end:14704-14723 MsG0080049020.01.T01:intergenic 30.0%
TAATATTACATGTGGCATGT+TGG - contig612end:12977-12996 MsG0080049020.01.T01:intron 30.0%
TACATAGATACTGATAAAGC+TGG - contig612end:17782-17801 MsG0080049020.01.T01:CDS 30.0%
TAGATAATCATTCAGCAACA+TGG + contig612end:11770-11789 MsG0080049020.01.T01:intergenic 30.0%
TAGGAACCCAATAATATGTT+AGG - contig612end:14249-14268 MsG0080049020.01.T01:intron 30.0%
TATGTTAAACAGAGTCTAGT+TGG - contig612end:15419-15438 MsG0080049020.01.T01:intron 30.0%
TCATTTGTACAAAACAGAAG+GGG + contig612end:12875-12894 MsG0080049020.01.T01:intergenic 30.0%
TCGCTCCCTATATATATATA+GGG - contig612end:13540-13559 MsG0080049020.01.T01:intron 30.0%
TCTATGCATTTGATAAGGAA+GGG + contig612end:16883-16902 MsG0080049020.01.T01:intergenic 30.0%
TCTATTTGTATAACACATGG+TGG - contig612end:17376-17395 MsG0080049020.01.T01:intron 30.0%
TGCTTAAAATCAAGACCAAA+GGG - contig612end:19153-19172 MsG0080049020.01.T01:intron 30.0%
TGGGTTCCTAACATATTATT+GGG + contig612end:14258-14277 MsG0080049020.01.T01:intergenic 30.0%
TGGTTCTTCATATAGATCTT+TGG - contig612end:17802-17821 MsG0080049020.01.T01:CDS 30.0%
TGTATATCCAATCACTTCAA+AGG + contig612end:10603-10622 MsG0080049020.01.T01:intergenic 30.0%
TGTGTGATTATGTTAGGATA+AGG + contig612end:12378-12397 MsG0080049020.01.T01:intergenic 30.0%
TGTTGTCATTCCGAAATTTA+GGG + contig612end:10914-10933 MsG0080049020.01.T01:intergenic 30.0%
TTACTCAATCCTACAACTTT+AGG - contig612end:19207-19226 MsG0080049020.01.T01:intron 30.0%
TTACTGATCTGTATCCATTT+CGG + contig612end:15261-15280 MsG0080049020.01.T01:intergenic 30.0%
TTAGAAGTTGTGGTTTCAAA+CGG + contig612end:13804-13823 MsG0080049020.01.T01:intergenic 30.0%
TTAGACCACATAGAATAATC+AGG + contig612end:17413-17432 MsG0080049020.01.T01:intergenic 30.0%
TTCAAAGAAATTGGACAGTT+TGG - contig612end:16750-16769 MsG0080049020.01.T01:intron 30.0%
TTCGCTCCCTATATATATAT+AGG - contig612end:13539-13558 MsG0080049020.01.T01:intron 30.0%
TTGGGTTCCTAACATATTAT+TGG + contig612end:14259-14278 MsG0080049020.01.T01:intergenic 30.0%
TTGTTGTCATTCCGAAATTT+AGG + contig612end:10915-10934 MsG0080049020.01.T01:intergenic 30.0%
! AAGAGTTATTGTGAGTATTG+AGG - contig612end:18048-18067 MsG0080049020.01.T01:intron 30.0%
! AATTTGAAGTTACCAGCTTA+CGG - contig612end:10228-10247 MsG0080049020.01.T01:CDS 30.0%
! AGTTTTACAAATAAGAAGGG+GGG - contig612end:11938-11957 MsG0080049020.01.T01:CDS 30.0%
! ATAACCTTCTAAAGATCTAC+GGG + contig612end:18202-18221 MsG0080049020.01.T01:intergenic 30.0%
! ATTTTACAAAAACATCCTGG+AGG - contig612end:17637-17656 MsG0080049020.01.T01:intron 30.0%
! CAATTCGTAGGTTGAAAATT+GGG - contig612end:13861-13880 MsG0080049020.01.T01:intron 30.0%
! CCCTTCTTATTTGTAAAACT+AGG + contig612end:11938-11957 MsG0080049020.01.T01:intergenic 30.0%
! CCTTTATTCCTCTTTTGTAT+TGG + contig612end:14107-14126 MsG0080049020.01.T01:intergenic 30.0%
! CTGTAATGATTGATCTTTTC+TGG - contig612end:10200-10219 MsG0080049020.01.T01:CDS 30.0%
! CTTTTCGTATATCGAAACTT+AGG + contig612end:10357-10376 MsG0080049020.01.T01:intergenic 30.0%
! GATAACCTTCTAAAGATCTA+CGG + contig612end:18203-18222 MsG0080049020.01.T01:intergenic 30.0%
! GCACGATATTACATTGTTTT+AGG - contig612end:11983-12002 MsG0080049020.01.T01:CDS 30.0%
! GTTTAAAACGAGTCTGAAAA+TGG - contig612end:12585-12604 MsG0080049020.01.T01:intron 30.0%
! GTTTAAAATGAGTCTGGAAA+TGG - contig612end:14745-14764 MsG0080049020.01.T01:intron 30.0%
! TATAGGAAAAGGAGTTTGTT+AGG + contig612end:14526-14545 MsG0080049020.01.T01:intergenic 30.0%
! TATTTCTTGCTTTGAATCAC+AGG - contig612end:17264-17283 MsG0080049020.01.T01:intron 30.0%
! TCAATTCGTAGGTTGAAAAT+TGG - contig612end:13860-13879 MsG0080049020.01.T01:intron 30.0%
! TGTTTCACTATGTTTTACCA+AGG - contig612end:11347-11366 MsG0080049020.01.T01:intron 30.0%
! TTGTAATAGTGTCACTATGA+CGG + contig612end:10788-10807 MsG0080049020.01.T01:intergenic 30.0%
! TTTCTTTATGATCTGAGATG+AGG + contig612end:17444-17463 MsG0080049020.01.T01:intergenic 30.0%
!! AAAGGAGTTTGTTAGGATAT+TGG + contig612end:14519-14538 MsG0080049020.01.T01:intergenic 30.0%
!! ACTAGCAAAGGCTTTAAAAT+AGG + contig612end:18259-18278 MsG0080049020.01.T01:intergenic 30.0%
!! AGAGTTATTGTGAGTATTGA+GGG - contig612end:18049-18068 MsG0080049020.01.T01:intron 30.0%
!! ATATAGATCTTTGGGGTAAT+AGG - contig612end:17811-17830 MsG0080049020.01.T01:CDS 30.0%
!! ATTTTTGAAAGTGCACTTCA+TGG + contig612end:19079-19098 MsG0080049020.01.T01:intergenic 30.0%
!! GGTTGTTATTTCTGAAAATG+TGG + contig612end:13054-13073 MsG0080049020.01.T01:intergenic 30.0%
!! GTTTCCAAATCATTTTAGTG+TGG - contig612end:18840-18859 MsG0080049020.01.T01:intron 30.0%
!!! CCCTAGTTTTACAAATAAGA+AGG - contig612end:11934-11953 MsG0080049020.01.T01:CDS 30.0%
!!! GATAAGCTATTTTGAAACCT+TGG - contig612end:11079-11098 MsG0080049020.01.T01:CDS 30.0%
AAAAGAGGAATAAAGGAGGA+GGG - contig612end:14111-14130 MsG0080049020.01.T01:intron 35.0%
AAATTGGACTTTACTCCCTT+TGG + contig612end:19171-19190 MsG0080049020.01.T01:intergenic 35.0%
AACACCAGAACCTAATTCAA+TGG + contig612end:11827-11846 MsG0080049020.01.T01:intergenic 35.0%
AACTGTGAATCAATTGGGAT+TGG + contig612end:11441-11460 MsG0080049020.01.T01:intergenic 35.0%
AAGACCTTAATCTTTCCACT+AGG - contig612end:15202-15221 MsG0080049020.01.T01:intron 35.0%
AAGATGACTCAAGAAATCCA+TGG - contig612end:19582-19601 MsG0080049020.01.T01:exon 35.0%
AAGGTGATATCACAATGGAT+CGG + contig612end:13757-13776 MsG0080049020.01.T01:intergenic 35.0%
AAGTGATTGGACGAATCATT+CGG - contig612end:10655-10674 MsG0080049020.01.T01:intron 35.0%
AATATGACGACATACAAGAC+AGG - contig612end:11411-11430 MsG0080049020.01.T01:intron 35.0%
AATGTGTGGTAGTTGAAAAG+TGG + contig612end:13685-13704 MsG0080049020.01.T01:intergenic 35.0%
ACACTGCTTGAAAAAGATGT+CGG + contig612end:18226-18245 MsG0080049020.01.T01:intergenic 35.0%
ACCACATAGAATAATCAGGA+AGG + contig612end:17409-17428 MsG0080049020.01.T01:intergenic 35.0%
ACTAAGATTTCTCTTACTGC+AGG - contig612end:19288-19307 MsG0080049020.01.T01:intron 35.0%
ACTCAGTGTGTGATTATGTT+AGG + contig612end:14550-14569 MsG0080049020.01.T01:intergenic 35.0%
ACTGAGTGTGTGATTATGTT+AGG + contig612end:12384-12403 MsG0080049020.01.T01:intergenic 35.0%
AGATGACTCAAGAAATCCAT+GGG - contig612end:19583-19602 MsG0080049020.01.T01:exon 35.0%
AGTAACAACATAGGATAAGG+AGG + contig612end:14487-14506 MsG0080049020.01.T01:intergenic 35.0%
AGTAGCAGAGAAACTAGAAT+GGG - contig612end:17591-17610 MsG0080049020.01.T01:intron 35.0%
ATAATCACACACTCAGTCAT+AGG - contig612end:12387-12406 MsG0080049020.01.T01:intron 35.0%
ATCCGTGTATTTATATCCGA+TGG + contig612end:13638-13657 MsG0080049020.01.T01:intergenic 35.0%
ATCTTAGCTAAGCAAGTGAT+TGG - contig612end:10642-10661 MsG0080049020.01.T01:intron 35.0%
ATTGAAAAAGAGGGAACTCT+AGG + contig612end:14359-14378 MsG0080049020.01.T01:intergenic 35.0%
ATTGAGATCTTGCCTAAGAT+AGG + contig612end:17187-17206 MsG0080049020.01.T01:intergenic 35.0%
ATTTGTGATCTATGGCAACA+AGG + contig612end:15322-15341 MsG0080049020.01.T01:intergenic 35.0%
CAACTTTATTGCAGAATCTG+CGG + contig612end:17308-17327 MsG0080049020.01.T01:intergenic 35.0%
CACATAGTTCCTAAAGTTGT+AGG + contig612end:19219-19238 MsG0080049020.01.T01:intergenic 35.0%
CAGATAGCAATAGATAGTAG+TGG - contig612end:18739-18758 MsG0080049020.01.T01:intron 35.0%
CAGTGACAGTGAAAAGAAAA+AGG + contig612end:10174-10193 MsG0080049020.01.T01:intergenic 35.0%
CCAATAATTGTTCTTCTACC+CGG + contig612end:10482-10501 MsG0080049020.01.T01:intergenic 35.0%
CCTAAGAATGACAGTGTAAA+GGG + contig612end:11525-11544 MsG0080049020.01.T01:intergenic 35.0%
CCTGAAACAAAGTGTATTGT+TGG - contig612end:19368-19387 MsG0080049020.01.T01:intron 35.0%
CCTTAAGCACTTCTTCATTA+TGG + contig612end:17341-17360 MsG0080049020.01.T01:intergenic 35.0%
CCTTTACACTGTCATTCTTA+GGG - contig612end:11523-11542 MsG0080049020.01.T01:intron 35.0%
CTAATAAGAACACTTCATGC+AGG + contig612end:13518-13537 MsG0080049020.01.T01:intergenic 35.0%
CTTTACACTGTCATTCTTAG+GGG - contig612end:11524-11543 MsG0080049020.01.T01:intron 35.0%
CTTTGAATCACAGGTATTAC+CGG - contig612end:17273-17292 MsG0080049020.01.T01:intron 35.0%
GAAAGCTTGTGATTGTGTTA+AGG + contig612end:18482-18501 MsG0080049020.01.T01:intergenic 35.0%
GAAATGGATACAGATCAGTA+AGG - contig612end:15260-15279 MsG0080049020.01.T01:intron 35.0%
GAAGTAGGACTAATATTCTC+AGG + contig612end:17488-17507 MsG0080049020.01.T01:intergenic 35.0%
GAGAACTTGAGTTTAATTCC+GGG - contig612end:10461-10480 MsG0080049020.01.T01:intron 35.0%
GATTAACAAAGTGCACAATC+AGG - contig612end:18098-18117 MsG0080049020.01.T01:intron 35.0%
GCAAAAGCCGTTATTTAAAC+TGG + contig612end:12717-12736 MsG0080049020.01.T01:intergenic 35.0%
GCAATATGTGCTACGTAATT+TGG + contig612end:15169-15188 MsG0080049020.01.T01:intergenic 35.0%
GGAACATATCTAGTGAGAAA+GGG - contig612end:13571-13590 MsG0080049020.01.T01:intron 35.0%
GGAATTAAACTCAAGTTCTC+CGG + contig612end:10461-10480 MsG0080049020.01.T01:intergenic 35.0%
GGAGAACTTGAGTTTAATTC+CGG - contig612end:10460-10479 MsG0080049020.01.T01:intron 35.0%
GGGGAATAAACATGTAAAAC+AGG + contig612end:17162-17181 MsG0080049020.01.T01:intergenic 35.0%
GGTCTCTTAGTTATATTGGT+TGG + contig612end:16919-16938 MsG0080049020.01.T01:intergenic 35.0%
GGTTTGGCAAAAAATAGGTT+TGG + contig612end:12545-12564 MsG0080049020.01.T01:intergenic 35.0%
GTAGAAACTGAACCATAAAC+AGG + contig612end:12500-12519 MsG0080049020.01.T01:intergenic 35.0%
GTATCTTCCATTGATCATCT+AGG + contig612end:17527-17546 MsG0080049020.01.T01:intergenic 35.0%
GTCATTCTTAGGGGATAAAT+TGG - contig612end:11533-11552 MsG0080049020.01.T01:intron 35.0%
GTCGTAGAAAGAGAAAACAA+AGG - contig612end:10061-10080 MsG0080049020.01.T01:exon 35.0%
GTCTATGCATTTGATAAGGA+AGG + contig612end:16884-16903 MsG0080049020.01.T01:intergenic 35.0%
GTCTTGTATGTCGTCATATT+AGG + contig612end:11411-11430 MsG0080049020.01.T01:intergenic 35.0%
GTGATTATGTTAGGATAAGG+AGG + contig612end:12375-12394 MsG0080049020.01.T01:intergenic 35.0%
GTGATTTATGGTAACAAGGA+TGG + contig612end:13213-13232 MsG0080049020.01.T01:intergenic 35.0%
GTTGAAAATTGGGTAAATCG+TGG - contig612end:13871-13890 MsG0080049020.01.T01:intron 35.0%
TAAGGAAGGGAAAATGCATT+TGG + contig612end:16870-16889 MsG0080049020.01.T01:intergenic 35.0%
TAAGTTTCAGATGCAGATGA+AGG - contig612end:19340-19359 MsG0080049020.01.T01:CDS 35.0%
TACTGATCTGTATCCATTTC+GGG + contig612end:15260-15279 MsG0080049020.01.T01:intergenic 35.0%
TACTGTCCTATACACTTGAT+CGG - contig612end:16975-16994 MsG0080049020.01.T01:intron 35.0%
TAGTAGCAGAGAAACTAGAA+TGG - contig612end:17590-17609 MsG0080049020.01.T01:intron 35.0%
TATAGGGTTAACACGAATTG+CGG - contig612end:10714-10733 MsG0080049020.01.T01:intron 35.0%
TATCCTTATGTGAGAACAAG+AGG + contig612end:16428-16447 MsG0080049020.01.T01:intergenic 35.0%
TATTACTATTGCGGTATAGC+AGG + contig612end:11293-11312 MsG0080049020.01.T01:intergenic 35.0%
TCATGACATGAGCTATCAAA+GGG + contig612end:13341-13360 MsG0080049020.01.T01:intergenic 35.0%
TCCTAGCTAAGCAAATTGTT+TGG - contig612end:10392-10411 MsG0080049020.01.T01:intron 35.0%
TCCTTCCTGATTATTCTATG+TGG - contig612end:17405-17424 MsG0080049020.01.T01:intron 35.0%
TCTTGTAGGATTGAAAGACT+TGG - contig612end:16708-16727 MsG0080049020.01.T01:intron 35.0%
TGATCTAGATGTGAAGAACA+AGG - contig612end:14146-14165 MsG0080049020.01.T01:intron 35.0%
TGATCTAGATGTGAAGAACT+AGG - contig612end:16245-16264 MsG0080049020.01.T01:intron 35.0%
TGGAAAGATTAAGGTCTTCT+CGG + contig612end:15200-15219 MsG0080049020.01.T01:intergenic 35.0%
TGGACCACACTAAAATGATT+TGG + contig612end:18847-18866 MsG0080049020.01.T01:intergenic 35.0%
TGTAGGATTGAGTAATTTGG+AGG + contig612end:19202-19221 MsG0080049020.01.T01:intergenic 35.0%
TGTATGACATTAGACCTTGA+CGG - contig612end:17235-17254 MsG0080049020.01.T01:intron 35.0%
TGTATTGTTGGGAATCATGA+AGG - contig612end:19380-19399 MsG0080049020.01.T01:intron 35.0%
TGTCTTCAACTTATTGCTAC+TGG - contig612end:10859-10878 MsG0080049020.01.T01:intron 35.0%
TGTGTGTGTTAGTTGAAAAG+TGG - contig612end:16343-16362 MsG0080049020.01.T01:intron 35.0%
TGTTAACCCTATAGTTCCTA+GGG + contig612end:10707-10726 MsG0080049020.01.T01:intergenic 35.0%
TTCATGACATGAGCTATCAA+AGG + contig612end:13342-13361 MsG0080049020.01.T01:intergenic 35.0%
TTCCTTAAACTTTGACGTAG+CGG - contig612end:11257-11276 MsG0080049020.01.T01:intron 35.0%
TTGAGAAGAAGTCAATTCGT+AGG - contig612end:13849-13868 MsG0080049020.01.T01:intron 35.0%
TTGTCTGCAATGATTGACAA+GGG + contig612end:19555-19574 MsG0080049020.01.T01:intergenic 35.0%
TTTATTCCCCTTCCTATCTT+AGG - contig612end:17172-17191 MsG0080049020.01.T01:intron 35.0%
TTTGGAGGAAGTTCAGAAAT+TGG + contig612end:19187-19206 MsG0080049020.01.T01:intergenic 35.0%
! AAAAAGGTATAGAGAGAGAG+AGG + contig612end:10158-10177 MsG0080049020.01.T01:intergenic 35.0%
! AAAAGGTATAGAGAGAGAGA+GGG + contig612end:10157-10176 MsG0080049020.01.T01:intergenic 35.0%
! AAAGCGGTTTGGCAAAAAAT+AGG + contig612end:12550-12569 MsG0080049020.01.T01:intergenic 35.0%
! AAGCGGTTTGGCATAAAAAA+AGG + contig612end:14709-14728 MsG0080049020.01.T01:intergenic 35.0%
! AATCTGTACTCATGACTTGT+CGG - contig612end:13936-13955 MsG0080049020.01.T01:intron 35.0%
! AGTATGATGGCTTGCAATAT+AGG - contig612end:17755-17774 MsG0080049020.01.T01:intron 35.0%
! ATAGAAGAACGCATTGATAG+AGG + contig612end:12248-12267 MsG0080049020.01.T01:intergenic 35.0%
! ATAGAAGAGTGCATTGATAG+AGG + contig612end:14430-14449 MsG0080049020.01.T01:intergenic 35.0%
! ATTGAATTAGGTTCTGGTGT+TGG - contig612end:11826-11845 MsG0080049020.01.T01:intron 35.0%
! CCAACAATACACTTTGTTTC+AGG + contig612end:19371-19390 MsG0080049020.01.T01:intergenic 35.0%
! GTATGATGGCTTGCAATATA+GGG - contig612end:17756-17775 MsG0080049020.01.T01:intron 35.0%
! GTTGGTCTATGCATTTGATA+AGG + contig612end:16888-16907 MsG0080049020.01.T01:intergenic 35.0%
! TAACCTTCTAAAGATCTACG+GGG + contig612end:18201-18220 MsG0080049020.01.T01:intergenic 35.0%
! TATTGGTTGGCATATGATGT+TGG + contig612end:16906-16925 MsG0080049020.01.T01:intergenic 35.0%
! TCCAAACAATTTGCTTAGCT+AGG + contig612end:10396-10415 MsG0080049020.01.T01:intergenic 35.0%
! TCGTTTATATTTGAGACCAG+AGG + contig612end:18938-18957 MsG0080049020.01.T01:intergenic 35.0%
! TTGCAAGCCATCATACTTTT+AGG + contig612end:17752-17771 MsG0080049020.01.T01:intergenic 35.0%
! TTGTTTGGAATGGAAAATGC+TGG - contig612end:16667-16686 MsG0080049020.01.T01:intron 35.0%
! TTTATTTGGTGATAACCCTC+TGG + contig612end:10543-10562 MsG0080049020.01.T01:intergenic 35.0%
! TTTTTATGCCAAACCGCTTT+TGG - contig612end:14710-14729 MsG0080049020.01.T01:intron 35.0%
!! AACTGATTTGACTTGAGCAT+TGG - contig612end:19489-19508 MsG0080049020.01.T01:exon 35.0%
!! AATGAAGAAGTGCTTAAGGT+AGG - contig612end:17342-17361 MsG0080049020.01.T01:intron 35.0%
!! AGCTATTCCTTTGAAGTGAT+TGG - contig612end:10593-10612 MsG0080049020.01.T01:intron 35.0%
!! ATGAAGAAGTGCTTAAGGTA+GGG - contig612end:17343-17362 MsG0080049020.01.T01:intron 35.0%
!! CCATAATGAAGAAGTGCTTA+AGG - contig612end:17338-17357 MsG0080049020.01.T01:intron 35.0%
!! GAAGATTTTCAAGGAGATGT+TGG + contig612end:16797-16816 MsG0080049020.01.T01:intergenic 35.0%
!!! ATTTTTTGCCAAACCGCTTT+TGG - contig612end:12550-12569 MsG0080049020.01.T01:intron 35.0%
!!! CTATTTTGAAACCTTGGAGT+TGG - contig612end:11085-11104 MsG0080049020.01.T01:CDS 35.0%
!!! GTAAAACTAGGGGCATTTTA+AGG + contig612end:11926-11945 MsG0080049020.01.T01:intergenic 35.0%
AAACTGCCTTAATTTCTCCG+AGG - contig612end:15345-15364 MsG0080049020.01.T01:intron 40.0%
AAAGAGGAATAAAGGAGGAG+GGG - contig612end:14112-14131 MsG0080049020.01.T01:intron 40.0%
AAAGCCTTTGCTAGTTGTCA+TGG - contig612end:18264-18283 MsG0080049020.01.T01:intron 40.0%
AAGAAATAATCACGCCGTCA+AGG + contig612end:17252-17271 MsG0080049020.01.T01:intergenic 40.0%
AAGACCTTAATCGTTCCACT+AGG - contig612end:13098-13117 MsG0080049020.01.T01:intron 40.0%
AATCAGATACTTTGTGGCAG+GGG + contig612end:13287-13306 MsG0080049020.01.T01:intergenic 40.0%
ACTGCCATTGAATTAGGTTC+TGG - contig612end:11820-11839 MsG0080049020.01.T01:intron 40.0%
ACTGCTAGATATATGCAGAG+AGG + contig612end:11014-11033 MsG0080049020.01.T01:intergenic 40.0%
ACTGTCCTATACACTTGATC+GGG - contig612end:16976-16995 MsG0080049020.01.T01:intron 40.0%
ACTTGGTTCACCTCTTTGAA+AGG - contig612end:11381-11400 MsG0080049020.01.T01:intron 40.0%
AGACCTTAATCGTTCCACTA+GGG - contig612end:13099-13118 MsG0080049020.01.T01:intron 40.0%
AGATCTTGCCTAAGATAGGA+AGG + contig612end:17183-17202 MsG0080049020.01.T01:intergenic 40.0%
AGATTTCTCTTACTGCAGGA+TGG - contig612end:19292-19311 MsG0080049020.01.T01:intron 40.0%
AGCATACTTCTGATGATTGG+AGG - contig612end:16642-16661 MsG0080049020.01.T01:intron 40.0%
AGGATTGCAAAAGGAAGAAG+AGG - contig612end:10081-10100 MsG0080049020.01.T01:exon 40.0%
AGGGATTATGTTAGTGTCAG+GGG - contig612end:18068-18087 MsG0080049020.01.T01:intron 40.0%
ATAGCCATGACAACTAGCAA+AGG + contig612end:18271-18290 MsG0080049020.01.T01:intergenic 40.0%
ATATGTGATTCCTCCAAGGT+GGG + contig612end:11041-11060 MsG0080049020.01.T01:intergenic 40.0%
ATCAGATACTTTGTGGCAGA+GGG + contig612end:15392-15411 MsG0080049020.01.T01:intergenic 40.0%
ATCTTGCCTAAGATAGGAAG+GGG + contig612end:17181-17200 MsG0080049020.01.T01:intergenic 40.0%
CAAAAGAGGAATAAAGGAGG+AGG - contig612end:14110-14129 MsG0080049020.01.T01:intron 40.0%
CAAATGTGAATTCCGTAAGC+TGG + contig612end:10243-10262 MsG0080049020.01.T01:intergenic 40.0%
CAATCAGATACTTTGTGGCA+GGG + contig612end:13288-13307 MsG0080049020.01.T01:intergenic 40.0%
CACTGCTTGAAAAAGATGTC+GGG + contig612end:18225-18244 MsG0080049020.01.T01:intergenic 40.0%
CAGCTTACGGAATTCACATT+TGG - contig612end:10241-10260 MsG0080049020.01.T01:CDS 40.0%
CATCCTCTTGTTCTCACATA+AGG - contig612end:16422-16441 MsG0080049020.01.T01:intron 40.0%
CATCTTAGCTCGTGATACAT+AGG + contig612end:18588-18607 MsG0080049020.01.T01:intergenic 40.0%
CCCTAAGAATGACAGTGTAA+AGG + contig612end:11526-11545 MsG0080049020.01.T01:intergenic 40.0%
CCCTTTACACTGTCATTCTT+AGG - contig612end:11522-11541 MsG0080049020.01.T01:intron 40.0%
CCGGGTAGAAGAACAATTAT+TGG - contig612end:10479-10498 MsG0080049020.01.T01:intron 40.0%
CCTTAAACACCATTGCATTG+CGG - contig612end:10750-10769 MsG0080049020.01.T01:intron 40.0%
CTGCTAGATATATGCAGAGA+GGG + contig612end:11013-11032 MsG0080049020.01.T01:intergenic 40.0%
GAAGCCAATCAGATACTTTG+TGG + contig612end:13293-13312 MsG0080049020.01.T01:intergenic 40.0%
GAAGCCTATCAGATACTTTG+TGG + contig612end:15399-15418 MsG0080049020.01.T01:intergenic 40.0%
GAATCATTCGGCTGAATTCT+GGG - contig612end:10667-10686 MsG0080049020.01.T01:intron 40.0%
GACTACTCCTTACACATTCA+GGG - contig612end:18159-18178 MsG0080049020.01.T01:intron 40.0%
GAGGATGACATATCAACCAT+TGG + contig612end:16409-16428 MsG0080049020.01.T01:intergenic 40.0%
GAGGGATTATGTTAGTGTCA+GGG - contig612end:18067-18086 MsG0080049020.01.T01:intron 40.0%
GATCTTGCCTAAGATAGGAA+GGG + contig612end:17182-17201 MsG0080049020.01.T01:intergenic 40.0%
GCAATATGTGCTACGTCATT+TGG + contig612end:13020-13039 MsG0080049020.01.T01:intergenic 40.0%
GCATACTTCTGATGATTGGA+GGG - contig612end:16643-16662 MsG0080049020.01.T01:intron 40.0%
GGAAAACATTAGAAGCTGAG+AGG - contig612end:17002-17021 MsG0080049020.01.T01:intron 40.0%
GGAAAGATTAAGGTCTTCTC+GGG + contig612end:15199-15218 MsG0080049020.01.T01:intergenic 40.0%
GGAGCATATCTAGTGAGAAA+GGG + contig612end:16451-16470 MsG0080049020.01.T01:intergenic 40.0%
GGGAACATATCTAGTGAGAA+AGG - contig612end:13570-13589 MsG0080049020.01.T01:intron 40.0%
GTAGAAGCCGTCATTTAAAC+TGG + contig612end:14877-14896 MsG0080049020.01.T01:intergenic 40.0%
GTAGCAGAGAAACTAGAATG+GGG - contig612end:17592-17611 MsG0080049020.01.T01:intron 40.0%
GTGCATAAACAATCCCGAAA+TGG - contig612end:13145-13164 MsG0080049020.01.T01:intron 40.0%
GTGTTAACCCTATAGTTCCT+AGG + contig612end:10708-10727 MsG0080049020.01.T01:intergenic 40.0%
GTTAACCCTATAGTTCCTAG+GGG + contig612end:10706-10725 MsG0080049020.01.T01:intergenic 40.0%
GTTGTCTGCAATGATTGACA+AGG + contig612end:19556-19575 MsG0080049020.01.T01:intergenic 40.0%
TATATGTGATTCCTCCAAGG+TGG + contig612end:11042-11061 MsG0080049020.01.T01:intergenic 40.0%
TATCAACTGAGCTATGCTCA+CGG - contig612end:19015-19034 MsG0080049020.01.T01:intron 40.0%
TATCAGATACTTTGTGGCAG+AGG + contig612end:15393-15412 MsG0080049020.01.T01:intergenic 40.0%
TATCCTTATGTGAGAGTGAG+AGG - contig612end:13594-13613 MsG0080049020.01.T01:intron 40.0%
TCCAGCATACTTCTGATGAT+TGG - contig612end:16639-16658 MsG0080049020.01.T01:intron 40.0%
TGACAGTGTAAAGGGTTACT+TGG + contig612end:11517-11536 MsG0080049020.01.T01:intergenic 40.0%
TGACTACTCCTTACACATTC+AGG - contig612end:18158-18177 MsG0080049020.01.T01:intron 40.0%
TGACTACTCGTTACACATTC+AGG + contig612end:17846-17865 MsG0080049020.01.T01:intergenic 40.0%
TGAGGGATTATGTTAGTGTC+AGG - contig612end:18066-18085 MsG0080049020.01.T01:intron 40.0%
TGATATCACAATGGATCGGA+AGG + contig612end:13753-13772 MsG0080049020.01.T01:intergenic 40.0%
TGCAATGATTGACAAGGGTA+GGG + contig612end:19550-19569 MsG0080049020.01.T01:intergenic 40.0%
TGCTCAAGTCAAATCAGTTC+TGG + contig612end:19488-19507 MsG0080049020.01.T01:intergenic 40.0%
TGGAACGATTAAGGTCTTCT+GGG + contig612end:13096-13115 MsG0080049020.01.T01:intergenic 40.0%
TGTCTGACTTCTGTCTTTCT+CGG + contig612end:15006-15025 MsG0080049020.01.T01:intergenic 40.0%
TTACCCCGTAGATCTTTAGA+AGG - contig612end:18195-18214 MsG0080049020.01.T01:intron 40.0%
TTATCTCAACCGCAATGCAA+TGG + contig612end:10762-10781 MsG0080049020.01.T01:intergenic 40.0%
TTGCATTGCGGTTGAGATAA+TGG - contig612end:10762-10781 MsG0080049020.01.T01:intron 40.0%
TTTATTGATCAGGGACCTAG+TGG + contig612end:15220-15239 MsG0080049020.01.T01:intergenic 40.0%
TTTCTCTTTCTACGACGCTT+TGG + contig612end:10057-10076 MsG0080049020.01.T01:intergenic 40.0%
TTTGATGAGTGAACAGCCAA+GGG + contig612end:14020-14039 MsG0080049020.01.T01:intergenic 40.0%
! AAAGGTATAGAGAGAGAGAG+GGG + contig612end:10156-10175 MsG0080049020.01.T01:intergenic 40.0%
! AATCTGTACCCATGACTTGT+CGG - contig612end:16035-16054 MsG0080049020.01.T01:intron 40.0%
! AGGATAAGGAGGAGTTGATT+GGG + contig612end:14476-14495 MsG0080049020.01.T01:intergenic 40.0%
! AGGATAAGGAGGAGTTTGTT+AGG + contig612end:12364-12383 MsG0080049020.01.T01:intergenic 40.0%
! CTACGGGGTAATAGTCATTT+TGG + contig612end:18186-18205 MsG0080049020.01.T01:intergenic 40.0%
! GGATTTGGTACAAGAAGAGA+TGG + contig612end:12328-12347 MsG0080049020.01.T01:intergenic 40.0%
! GGTCTGGTTTAAAATGAGTC+TGG - contig612end:14739-14758 MsG0080049020.01.T01:intron 40.0%
! TAGCTGAGCCAGTTTAAAAC+TGG + contig612end:12822-12841 MsG0080049020.01.T01:intergenic 40.0%
! TAGGATAAGGAGGAGTTGAT+TGG + contig612end:14477-14496 MsG0080049020.01.T01:intergenic 40.0%
! TCAACTTATTGCTACTGGCT+TGG - contig612end:10864-10883 MsG0080049020.01.T01:intron 40.0%
! TCCAATCATCAGAAGTATGC+TGG + contig612end:16643-16662 MsG0080049020.01.T01:intergenic 40.0%
! TCTGCCACAAAGTATCTGAT+AGG - contig612end:15392-15411 MsG0080049020.01.T01:intron 40.0%
! TGAGCATAGCTCAGTTGATA+AGG + contig612end:19015-19034 MsG0080049020.01.T01:intergenic 40.0%
! TTCTGAGGAGTTAATCAGCT+GGG - contig612end:13254-13273 MsG0080049020.01.T01:intron 40.0%
! TTTCTGAGGAGTTAATCAGC+TGG - contig612end:13253-13272 MsG0080049020.01.T01:intron 40.0%
! TTTTGGTCCCTGAATGTGTA+AGG + contig612end:18169-18188 MsG0080049020.01.T01:intergenic 40.0%
!! ATGTGGCATGTTGGTTCTAT+TGG - contig612end:12986-13005 MsG0080049020.01.T01:intron 40.0%
!! GAGCATAGCTCAGTTGATAA+GGG + contig612end:19014-19033 MsG0080049020.01.T01:intergenic 40.0%
!! GTCAAACATCCTTTGCTGTT+TGG - contig612end:18506-18525 MsG0080049020.01.T01:intron 40.0%
!!! GTGTTTTGGTTCGAACTGAA+AGG - contig612end:19515-19534 MsG0080049020.01.T01:exon 40.0%
!!! TTGAGCATTGGCTAGTGTTT+TGG - contig612end:19501-19520 MsG0080049020.01.T01:exon 40.0%
!!! TTTTGAAACCTTGGAGTTGG+AGG - contig612end:11088-11107 MsG0080049020.01.T01:intron 40.0%
AAATAACGTGTCATCGTGGC+AGG + contig612end:16506-16525 MsG0080049020.01.T01:intergenic 45.0%
AACTTGCAGGAGCTGTCTAA+CGG + contig612end:18534-18553 MsG0080049020.01.T01:intergenic 45.0%
AAGAGGAATAAAGGAGGAGG+GGG - contig612end:14113-14132 MsG0080049020.01.T01:intron 45.0%
AAGGTATAGAGAGAGAGAGG+GGG + contig612end:10155-10174 MsG0080049020.01.T01:intergenic 45.0%
AATGTTCACATACAGCCCCT+TGG - contig612end:13475-13494 MsG0080049020.01.T01:intron 45.0%
AGAACAAAGTCGAAACCTCC+AGG + contig612end:17655-17674 MsG0080049020.01.T01:intergenic 45.0%
AGAGGTTTGATGAAGCAGGA+TGG - contig612end:14173-14192 MsG0080049020.01.T01:intron 45.0%
AGGATTGAAAGACTTGGCTC+AGG - contig612end:16714-16733 MsG0080049020.01.T01:intron 45.0%
ATCAACTGAGCTATGCTCAC+GGG - contig612end:19016-19035 MsG0080049020.01.T01:intron 45.0%
ATCAGATACTTTGTGGCAGG+GGG + contig612end:13286-13305 MsG0080049020.01.T01:intergenic 45.0%
ATCTCTCGTCCTCATCTTTG+AGG - contig612end:10976-10995 MsG0080049020.01.T01:intron 45.0%
ATTGAAAAAGGGGGAACCCT+AGG + contig612end:12177-12196 MsG0080049020.01.T01:intergenic 45.0%
CATCCTCTCACTCTCACATA+AGG + contig612end:13600-13619 MsG0080049020.01.T01:intergenic 45.0%
CCAATCAGATACTTTGTGGC+AGG + contig612end:13289-13308 MsG0080049020.01.T01:intergenic 45.0%
CCACACGTAGATCTAAAAGC+TGG + contig612end:17092-17111 MsG0080049020.01.T01:intergenic 45.0%
CCACTAAACCAAAAGCGGTT+TGG + contig612end:12561-12580 MsG0080049020.01.T01:intergenic 45.0%
CCAGACCACTAAACCAAAAG+CGG + contig612end:12566-12585 MsG0080049020.01.T01:intergenic 45.0%
CCGCAATGCAATGGTGTTTA+AGG + contig612end:10753-10772 MsG0080049020.01.T01:intergenic 45.0%
CCTATACACTTGATCGGGAA+GGG - contig612end:16981-17000 MsG0080049020.01.T01:intron 45.0%
CGAATCATTCGGCTGAATTC+TGG - contig612end:10666-10685 MsG0080049020.01.T01:intron 45.0%
CTAACGGTACCAAACAGCAA+AGG + contig612end:18518-18537 MsG0080049020.01.T01:intergenic 45.0%
CTGCAATGATTGACAAGGGT+AGG + contig612end:19551-19570 MsG0080049020.01.T01:intergenic 45.0%
GAAAAAGAGGGAACTCTAGG+AGG + contig612end:14356-14375 MsG0080049020.01.T01:intergenic 45.0%
GAAGTTGTGGTTTCAAACGG+TGG + contig612end:13801-13820 MsG0080049020.01.T01:intergenic 45.0%
GACTGAAAGCCTCAAAGATG+AGG + contig612end:10988-11007 MsG0080049020.01.T01:intergenic 45.0%
GAGAGAAAACTCTCCTCCTA+GGG - contig612end:12158-12177 MsG0080049020.01.T01:intron 45.0%
GAGGTTTGATGAAGCAGGAT+GGG - contig612end:14174-14193 MsG0080049020.01.T01:intron 45.0%
GGAACGATTAAGGTCTTCTG+GGG + contig612end:13095-13114 MsG0080049020.01.T01:intergenic 45.0%
GGAGGTTTCGACTTTGTTCT+TGG - contig612end:17655-17674 MsG0080049020.01.T01:intron 45.0%
GGATTGAAAGACTTGGCTCA+GGG - contig612end:16715-16734 MsG0080049020.01.T01:intron 45.0%
GGGACCTAGTGGAAAGATTA+AGG + contig612end:15209-15228 MsG0080049020.01.T01:intergenic 45.0%
GGTGGAAGGTGATATCACAA+TGG + contig612end:13762-13781 MsG0080049020.01.T01:intergenic 45.0%
GGTTGCACTGCCATTGAATT+AGG - contig612end:11814-11833 MsG0080049020.01.T01:intron 45.0%
GTGATCTATGGCAACAAGGA+TGG + contig612end:15318-15337 MsG0080049020.01.T01:intergenic 45.0%
GTGGAACGATTAAGGTCTTC+TGG + contig612end:13097-13116 MsG0080049020.01.T01:intergenic 45.0%
GTTTGATGAGTGAACAGCCA+AGG + contig612end:14021-14040 MsG0080049020.01.T01:intergenic 45.0%
TAATGAGTTCCGCCTGAGAA+CGG - contig612end:10429-10448 MsG0080049020.01.T01:intron 45.0%
TATGTGATTCCTCCAAGGTG+GGG + contig612end:11040-11059 MsG0080049020.01.T01:intergenic 45.0%
TCATATGCCATGTCTGCTTC+TGG + contig612end:19462-19481 MsG0080049020.01.T01:intergenic 45.0%
TCCTATACACTTGATCGGGA+AGG - contig612end:16980-16999 MsG0080049020.01.T01:intron 45.0%
TCTGAGAGGTTTGATGAAGC+AGG - contig612end:14169-14188 MsG0080049020.01.T01:intron 45.0%
TGACGACATACAAGACAGGA+CGG - contig612end:11415-11434 MsG0080049020.01.T01:intron 45.0%
TGGCAGGTTGTATAGTGGTA+AGG + contig612end:16490-16509 MsG0080049020.01.T01:intergenic 45.0%
TGTGAAGAACAAGGTCTGAG+AGG - contig612end:14155-14174 MsG0080049020.01.T01:intron 45.0%
TGTGAAGAACTAGGTCTGAG+AGG - contig612end:16254-16273 MsG0080049020.01.T01:intron 45.0%
TTGGCTCCTCGGAGAAATTA+AGG + contig612end:15354-15373 MsG0080049020.01.T01:intergenic 45.0%
TTTATTGATCAGGGCCCTAG+TGG + contig612end:13116-13135 MsG0080049020.01.T01:intergenic 45.0%
! ATAACCCTCTGGTTCCTAGT+CGG + contig612end:10532-10551 MsG0080049020.01.T01:intergenic 45.0%
! ATTCTGCTTTGTTCCCCATC+AGG - contig612end:12434-12453 MsG0080049020.01.T01:intron 45.0%
! ATTGGAGGGCTTGTTTGGAA+TGG - contig612end:16657-16676 MsG0080049020.01.T01:intron 45.0%
! ATTTGACAGGGCAGTTGGTA+TGG - contig612end:11737-11756 MsG0080049020.01.T01:intron 45.0%
! CAGCTGACTTCGATTTGACA+GGG - contig612end:11725-11744 MsG0080049020.01.T01:intron 45.0%
! CCAGCTTTTAGATCTACGTG+TGG - contig612end:17089-17108 MsG0080049020.01.T01:intron 45.0%
! CCTGCCACAAAGTATCTGAT+TGG - contig612end:13286-13305 MsG0080049020.01.T01:intron 45.0%
! GAATCTGCGGCAAAGTATTC+CGG + contig612end:17295-17314 MsG0080049020.01.T01:intergenic 45.0%
! GATGTTGGTTAATGCACCGA+AGG + contig612end:16782-16801 MsG0080049020.01.T01:intergenic 45.0%
! GGATAAGGAGGAGTTGATTG+GGG + contig612end:14475-14494 MsG0080049020.01.T01:intergenic 45.0%
! GGGAGCATATCTAGTGAGAA+AGG + contig612end:16452-16471 MsG0080049020.01.T01:intergenic 45.0%
! GGTGTTTAAGGTAGCACCTA+GGG + contig612end:10741-10760 MsG0080049020.01.T01:intergenic 45.0%
! GTGTTTAAGGTAGCACCTAG+GGG + contig612end:10740-10759 MsG0080049020.01.T01:intergenic 45.0%
! TCAGCTGACTTCGATTTGAC+AGG - contig612end:11724-11743 MsG0080049020.01.T01:intron 45.0%
! TGATGATTGGAGGGCTTGTT+TGG - contig612end:16652-16671 MsG0080049020.01.T01:intron 45.0%
! TGGTGTTTAAGGTAGCACCT+AGG + contig612end:10742-10761 MsG0080049020.01.T01:intergenic 45.0%
! TTCTGCTTTGTTCCCCATCA+GGG - contig612end:12435-12454 MsG0080049020.01.T01:intron 45.0%
!! TTCTGCCTTCGTTAACTTGC+AGG + contig612end:18547-18566 MsG0080049020.01.T01:intergenic 45.0%
!!! CCAAACCGCTTTTGGTTTAG+TGG - contig612end:12558-12577 MsG0080049020.01.T01:intron 45.0%
!!! ATTACAATATTAATTTTATT+TGG + contig612end:18422-18441 MsG0080049020.01.T01:intergenic 5.0%
AAATCCTGCACACCCCTGAT+GGG + contig612end:12451-12470 MsG0080049020.01.T01:intergenic 50.0%
AACCCTATAGTTCCTAGGGG+AGG + contig612end:10703-10722 MsG0080049020.01.T01:intergenic 50.0%
AACGGTGGAAGCCTAGATTG+AGG + contig612end:13786-13805 MsG0080049020.01.T01:intergenic 50.0%
AAGTCCTACACACCCCTGAT+GGG + contig612end:14617-14636 MsG0080049020.01.T01:intergenic 50.0%
AATAAAGGAGGAGGGGGTCA+TGG - contig612end:14119-14138 MsG0080049020.01.T01:intron 50.0%
AATGTTCACGTACAGCCCCT+TGG - contig612end:15582-15601 MsG0080049020.01.T01:intron 50.0%
ACCCTATAGTTCCTAGGGGA+GGG + contig612end:10702-10721 MsG0080049020.01.T01:intergenic 50.0%
ACCTTCCACCTCCTCAATCT+AGG - contig612end:13772-13791 MsG0080049020.01.T01:intron 50.0%
AGCTGAGAGGCAAAGACGTT+AGG - contig612end:17015-17034 MsG0080049020.01.T01:intron 50.0%
AGGAGTTAATCAGCTGGGCA+TGG - contig612end:13259-13278 MsG0080049020.01.T01:intron 50.0%
AGGATGGGAAAGAGAAGGTG+AGG - contig612end:14189-14208 MsG0080049020.01.T01:intron 50.0%
AGGTATAGAGAGAGAGAGGG+GGG + contig612end:10154-10173 MsG0080049020.01.T01:intergenic 50.0%
ATGAGTGAACAGCCAAGGGA+GGG + contig612end:14016-14035 MsG0080049020.01.T01:intergenic 50.0%
CAGCTCCTGCAAGTTAACGA+AGG - contig612end:18539-18558 MsG0080049020.01.T01:intron 50.0%
CATCGTGGCAGGTTGTATAG+TGG + contig612end:16495-16514 MsG0080049020.01.T01:intergenic 50.0%
CATGGTCTCCGACAAGTCAT+GGG + contig612end:13947-13966 MsG0080049020.01.T01:intergenic 50.0%
CCCTTCCCGATCAAGTGTAT+AGG + contig612end:16984-17003 MsG0080049020.01.T01:intergenic 50.0%
CGGCTGAATTCTGGGTTTCT+AGG - contig612end:10675-10694 MsG0080049020.01.T01:intron 50.0%
GAAGCAGGATGGGAAAGAGA+AGG - contig612end:14184-14203 MsG0080049020.01.T01:intron 50.0%
GAGGTTTCCAGAAGCAGACA+TGG - contig612end:19452-19471 MsG0080049020.01.T01:intron 50.0%
GATGGGAAAGAGAAGGTGAG+GGG - contig612end:14191-14210 MsG0080049020.01.T01:intron 50.0%
GCTGAGAGGCAAAGACGTTA+GGG - contig612end:17016-17035 MsG0080049020.01.T01:intron 50.0%
GGAGAGAAAACTCTCCTCCT+AGG - contig612end:12157-12176 MsG0080049020.01.T01:intron 50.0%
GGATGGGAAAGAGAAGGTGA+GGG - contig612end:14190-14209 MsG0080049020.01.T01:intron 50.0%
GGCCGCTACGTCAAAGTTTA+AGG + contig612end:11262-11281 MsG0080049020.01.T01:intergenic 50.0%
GTCGGACTTTACTTCCCTCT+CGG - contig612end:10501-10520 MsG0080049020.01.T01:intron 50.0%
TCATTCAGCAACATGGCTCC+AGG + contig612end:11763-11782 MsG0080049020.01.T01:intergenic 50.0%
TCTAGCAGTATTCCCCACCT+TGG - contig612end:11025-11044 MsG0080049020.01.T01:CDS 50.0%
! AATGTTGGCCTCCAACTCCA+AGG + contig612end:11099-11118 MsG0080049020.01.T01:intergenic 50.0%
! ATGCAGGAAGAGAGTGTACG+AGG + contig612end:13502-13521 MsG0080049020.01.T01:intergenic 50.0%
! CAAGGGAGGGAGAGATTTTG+CGG + contig612end:14003-14022 MsG0080049020.01.T01:intergenic 50.0%
! CTTCGATTTGACAGGGCAGT+TGG - contig612end:11732-11751 MsG0080049020.01.T01:intron 50.0%
! GACAGTTTGGCTAGCTCCTT+CGG - contig612end:16763-16782 MsG0080049020.01.T01:intron 50.0%
! GAGAGATTTTGCGGTCACGA+AGG + contig612end:13994-14013 MsG0080049020.01.T01:intergenic 50.0%
! TCATGACTTGTCGGAGACCA+TGG - contig612end:13945-13964 MsG0080049020.01.T01:intron 50.0%
! TCTGCTTTGTTCCCCATCAG+GGG - contig612end:12436-12455 MsG0080049020.01.T01:intron 50.0%
! TGCAGGAAGAGAGTGTACGA+GGG + contig612end:13501-13520 MsG0080049020.01.T01:intergenic 50.0%
!! ATGCTGCTTTGATCCCCATC+AGG - contig612end:14600-14619 MsG0080049020.01.T01:intron 50.0%
!! TGCTGCTTTGATCCCCATCA+GGG - contig612end:14601-14620 MsG0080049020.01.T01:intron 50.0%
!! TTCTGGGGTATTGCAGCTGA+CGG + contig612end:13080-13099 MsG0080049020.01.T01:intergenic 50.0%
!!! CCGCTTTTGGTTTAGTGGTC+TGG - contig612end:12563-12582 MsG0080049020.01.T01:intron 50.0%
AATCCTGCACACCCCTGATG+GGG + contig612end:12450-12469 MsG0080049020.01.T01:intergenic 55.0%
AGCAGTATTCCCCACCTTGG+AGG - contig612end:11028-11047 MsG0080049020.01.T01:CDS 55.0%
AGGAGCCAATCAGCTAGGCA+TGG - contig612end:15365-15384 MsG0080049020.01.T01:intron 55.0%
AGGGTCCATGCCTAGCTGAT+TGG + contig612end:15373-15392 MsG0080049020.01.T01:intergenic 55.0%
AGTCCTACACACCCCTGATG+GGG + contig612end:14616-14635 MsG0080049020.01.T01:intergenic 55.0%
CAAATCCTGCACACCCCTGA+TGG + contig612end:12452-12471 MsG0080049020.01.T01:intergenic 55.0%
CAAGTCCTACACACCCCTGA+TGG + contig612end:14618-14637 MsG0080049020.01.T01:intergenic 55.0%
CCATGGTCTCCGACAAGTCA+TGG + contig612end:13948-13967 MsG0080049020.01.T01:intergenic 55.0%
CCCCTCCCCTAGGAACTATA+GGG - contig612end:10698-10717 MsG0080049020.01.T01:intron 55.0%
CCCTATAGTTCCTAGGGGAG+GGG + contig612end:10701-10720 MsG0080049020.01.T01:intergenic 55.0%
CGCAAAATCTCTCCCTCCCT+TGG - contig612end:14001-14020 MsG0080049020.01.T01:intron 55.0%
CGCCTGAGAACGGATCATTC+CGG - contig612end:10439-10458 MsG0080049020.01.T01:intron 55.0%
CGGAATGATCCGTTCTCAGG+CGG + contig612end:10441-10460 MsG0080049020.01.T01:intergenic 55.0%
CTCCGGAATGATCCGTTCTC+AGG + contig612end:10444-10463 MsG0080049020.01.T01:intergenic 55.0%
GAAAAAGGGGGAACCCTAGG+AGG + contig612end:12174-12193 MsG0080049020.01.T01:intergenic 55.0%
GATGAGTGAACAGCCAAGGG+AGG + contig612end:14017-14036 MsG0080049020.01.T01:intergenic 55.0%
GCCTAGATTGAGGAGGTGGA+AGG + contig612end:13776-13795 MsG0080049020.01.T01:intergenic 55.0%
GCGGTATAGCAGGTGCAGTA+TGG + contig612end:11283-11302 MsG0080049020.01.T01:intergenic 55.0%
GGAAGCCTAGATTGAGGAGG+TGG + contig612end:13780-13799 MsG0080049020.01.T01:intergenic 55.0%
GGGCCCTAGTGGAACGATTA+AGG + contig612end:13105-13124 MsG0080049020.01.T01:intergenic 55.0%
GGTATAGAGAGAGAGAGGGG+GGG + contig612end:10153-10172 MsG0080049020.01.T01:intergenic 55.0%
GGTGGAAGCCTAGATTGAGG+AGG + contig612end:13783-13802 MsG0080049020.01.T01:intergenic 55.0%
TAACACGAATTGCGGCCCCT+AGG - contig612end:10722-10741 MsG0080049020.01.T01:intron 55.0%
! AAGAGAGTGTACGAGGGCCA+AGG + contig612end:13495-13514 MsG0080049020.01.T01:intergenic 55.0%
! AGAGAGTGTACGAGGGCCAA+GGG + contig612end:13494-13513 MsG0080049020.01.T01:intergenic 55.0%
! CATCAGGGGTGTGCAGGATT+TGG - contig612end:12450-12469 MsG0080049020.01.T01:intron 55.0%
! CATCAGGGGTGTGTAGGACT+TGG - contig612end:14616-14635 MsG0080049020.01.T01:intron 55.0%
! CCATGACTTGTCGGAGACCA+TGG - contig612end:16044-16063 MsG0080049020.01.T01:intron 55.0%
! GCTGCTTTGATCCCCATCAG+GGG - contig612end:14602-14621 MsG0080049020.01.T01:intron 55.0%
! GGGTATTGCAGCTGACGGAT+CGG + contig612end:13075-13094 MsG0080049020.01.T01:intergenic 55.0%
! TGCCTAGCTGATTGGCTCCT+CGG + contig612end:15365-15384 MsG0080049020.01.T01:intergenic 55.0%
! TTTTGCGGTCACGAAGGCCA+CGG + contig612end:13988-14007 MsG0080049020.01.T01:intergenic 55.0%
AAGGAGGAGGGGGTCATGGT+AGG - contig612end:14123-14142 MsG0080049020.01.T01:intron 60.0%
AAGGAGGAGGGGGTCATGGT+CGG - contig612end:14123-14142 MsG0080049020.01.T01:intron 60.0%
CACGAAGGCCACGGTGAAGA+GGG + contig612end:13979-13998 MsG0080049020.01.T01:intergenic 60.0%
CCCTCCGACTAGGAACCAGA+GGG - contig612end:10525-10544 MsG0080049020.01.T01:intron 60.0%
CTCCGAGGAGCCAATCAGCT+AGG - contig612end:15360-15379 MsG0080049020.01.T01:intron 60.0%
GCCCCTCCCCTAGGAACTAT+AGG - contig612end:10697-10716 MsG0080049020.01.T01:intron 60.0%
TCACGAAGGCCACGGTGAAG+AGG + contig612end:13980-13999 MsG0080049020.01.T01:intergenic 60.0%
TGAAGAGGGTGAGGCGACCA+TGG + contig612end:13965-13984 MsG0080049020.01.T01:intergenic 60.0%
! ACAGGGCAGTTGGTATGGCC+TGG - contig612end:11742-11761 MsG0080049020.01.T01:intron 60.0%
! ACCCTCTGGTTCCTAGTCGG+AGG + contig612end:10529-10548 MsG0080049020.01.T01:intergenic 60.0%
! CCCTCTGGTTCCTAGTCGGA+GGG + contig612end:10528-10547 MsG0080049020.01.T01:intergenic 60.0%
! CCTCTGGTTCCTAGTCGGAG+GGG + contig612end:10527-10546 MsG0080049020.01.T01:intergenic 60.0%
! GAGAGTGTACGAGGGCCAAG+GGG + contig612end:13493-13512 MsG0080049020.01.T01:intergenic 60.0%
! GATCCCCATCAGGGGTGTGT+AGG - contig612end:14610-14629 MsG0080049020.01.T01:intron 60.0%
AGGCCACGGTGAAGAGGGTG+AGG + contig612end:13974-13993 MsG0080049020.01.T01:intergenic 65.0%
CCCCTCCGACTAGGAACCAG+AGG - contig612end:10524-10543 MsG0080049020.01.T01:intron 65.0%
TCGCCTCACCCTCTTCACCG+TGG - contig612end:13968-13987 MsG0080049020.01.T01:intron 65.0%
! GGTTTCTAGGCCCCTCCCCT+AGG - contig612end:10688-10707 MsG0080049020.01.T01:intron 65.0%
! GTTCCCCATCAGGGGTGTGC+AGG - contig612end:12444-12463 MsG0080049020.01.T01:intron 65.0%
CCTAGTCGGAGGGGCCGAGA+GGG + contig612end:10518-10537 MsG0080049020.01.T01:intergenic 70.0%
TCCTAGTCGGAGGGGCCGAG+AGG + contig612end:10519-10538 MsG0080049020.01.T01:intergenic 70.0%
CCCTCTCGGCCCCTCCGACT+AGG - contig612end:10515-10534 MsG0080049020.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
contig612end gene 10001 19611 10001 ID=MsG0080049020.01;
contig612end mRNA 10001 19611 10001 ID=MsG0080049020.01.T01;Parent=MsG0080049020.01
contig612end exon 10001 10302 10001 ID=MsG0080049020.01.T01.exon;Parent=MsG0080049020.01.T01
contig612end CDS 10182 10302 10182 ID=MsG0080049020.01.T01.cds;Parent=MsG0080049020.01.T01
contig612end CDS 11006 11105 11006 ID=MsG0080049020.01.T01.cds;Parent=MsG0080049020.01.T01
contig612end exon 11006 11105 11006 ID=MsG0080049020.01.T01.exon;Parent=MsG0080049020.01.T01
contig612end CDS 11763 11779 11763 ID=MsG0080049020.01.T01.cds;Parent=MsG0080049020.01.T01
contig612end exon 11763 11779 11763 ID=MsG0080049020.01.T01.exon;Parent=MsG0080049020.01.T01
contig612end CDS 11911 12025 11911 ID=MsG0080049020.01.T01.cds;Parent=MsG0080049020.01.T01
contig612end exon 11911 12025 11911 ID=MsG0080049020.01.T01.exon;Parent=MsG0080049020.01.T01
contig612end CDS 12100 12160 12100 ID=MsG0080049020.01.T01.cds;Parent=MsG0080049020.01.T01
contig612end exon 12100 12160 12100 ID=MsG0080049020.01.T01.exon;Parent=MsG0080049020.01.T01
contig612end CDS 12253 12326 12253 ID=MsG0080049020.01.T01.cds;Parent=MsG0080049020.01.T01
contig612end exon 12253 12326 12253 ID=MsG0080049020.01.T01.exon;Parent=MsG0080049020.01.T01
contig612end CDS 17765 17884 17765 ID=MsG0080049020.01.T01.cds;Parent=MsG0080049020.01.T01
contig612end exon 17765 17884 17765 ID=MsG0080049020.01.T01.exon;Parent=MsG0080049020.01.T01
contig612end CDS 19308 19375 19308 ID=MsG0080049020.01.T01.cds;Parent=MsG0080049020.01.T01
contig612end exon 19308 19375 19308 ID=MsG0080049020.01.T01.exon;Parent=MsG0080049020.01.T01
contig612end CDS 19469 19563 19469 ID=MsG0080049020.01.T01.cds;Parent=MsG0080049020.01.T01
contig612end exon 19469 19611 19469 ID=MsG0080049020.01.T01.exon;Parent=MsG0080049020.01.T01
Gene Sequence

>MsG0080049020.01.T01

ATGAACCAAAGCGTCGTAGAAAGAGAAAACAAAGGATTGCAAAAGGAAGAAGAGGAAATCGTTTGCTTAGATGCATCGTTCTTCATGAATGACGATTACCAGCTTACGGAATTCACATTTGGCTCTCAAAATTTTCAGCTCTTCTGTTTGCAATCTGCTTCCACTGACTTCGATTTGACAGGGCAGTTGGTATGGCCTGGAGCCATGTTGCTGAATGATTATCTATCAAAACATGTTGAGATGTTTCAGGGTTGCACTGCCATTGAATTAGGTTCTGGTGTTGGTATTACCGGAATACTTTGCCGCAGATTCTGCAATAAAGTTGTGTTGACAGACCATAATGAAGAAGTGCTTAAGATCATAAAGAAAAATATAGAGCTGCATTCATGTCCTGAGAATATTAGTCCTACTTCTAATGGATTAGTAGCAGAGAAACTAGAATGGGGAAACACTGATCAGATCCATGAAATTTTACAAAAACATCCTGGAGGTTTCGACTTTGTTCTTGGTGCTGATATCTATATCCTTATTATGCATTTTGATCCTGAATTCAAACATCCTTTGCTGTTTGGTACCGTTAGACAGCTCCTGCAAGTTAACGAAGGCAGAAAATGCAAGTTCATACTAGCCTATGTATCACGAGCTAAGATGATGGATTCGATGATTATTTCTGAAGCTTCTAAGTTTCAGATGCAGATGAAGGAAGTGCCTGAAACAAAGTGTATTGTTGGGAATCATGAAGGTGTCATCTATGAGATCACACTCAAGTAA
Protein sequence

>MsG0080049020.01.T01

MNQSVVERENKGLQKEEEEIVCLDASFFMNDDYQLTEFTFGSQNFQLFCLQSASTDFDLTGQLVWPGAMLLNDYLSKHVEMFQGCTAIELGSGVGITGILCRRFCNKVVLTDHNEEVLKIIKKNIELHSCPENISPTSNGLVAEKLEWGNTDQIHEILQKHPGGFDFVLGADIYILIMHFDPEFKHPLLFGTVRQLLQVNEGRKCKFILAYVSRAKMMDSMIISEASKFQMQMKEVPETKCIVGNHEGVIYEITLK*