Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037965.01.T01 | XP_024636298.1 | 90.909 | 451 | 40 | 1 | 36 | 485 | 77 | 527 | 0 | 835 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037965.01.T01 | Q9LDD4 | 48 | 200 | 96 | 4 | 289 | 485 | 374 | 568 | 6.50E-51 | 185 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037965.01.T01 | A0A072VX39 | 90.466 | 451 | 39 | 2 | 36 | 485 | 145 | 592 | 0.0 | 826 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048826.01 | MsG0780037965.01 | 0.814499 | 1.493287e-51 | 1.003708e-48 |
| MsG0080049020.01 | MsG0780037965.01 | 0.803167 | 3.967423e-49 | 1.979896e-46 |
| MsG0180000470.01 | MsG0780037965.01 | 0.822821 | 1.929722e-53 | 1.632914e-50 |
| MsG0180001063.01 | MsG0780037965.01 | 0.848631 | 5.420486e-60 | 1.000892e-56 |
| MsG0180002842.01 | MsG0780037965.01 | 0.818398 | 2.001257e-52 | 1.496495e-49 |
| MsG0180003952.01 | MsG0780037965.01 | 0.803326 | 3.677181e-49 | 1.842493e-46 |
| MsG0180006054.01 | MsG0780037965.01 | 0.834625 | 2.690441e-56 | 3.210665e-53 |
| MsG0280010722.01 | MsG0780037965.01 | 0.831843 | 1.326117e-55 | 1.456645e-52 |
| MsG0280011059.01 | MsG0780037965.01 | -0.805065 | 1.597863e-49 | 8.373111e-47 |
| MsG0280011175.01 | MsG0780037965.01 | 0.857911 | 1.182349e-62 | 2.964890e-59 |
| MsG0380011609.01 | MsG0780037965.01 | 0.838101 | 3.511365e-57 | 4.654703e-54 |
| MsG0380014251.01 | MsG0780037965.01 | 0.807985 | 3.867659e-50 | 2.185185e-47 |
| MsG0680030880.01 | MsG0780037965.01 | 0.809038 | 2.304914e-50 | 1.338889e-47 |
| MsG0680030882.01 | MsG0780037965.01 | 0.802910 | 4.483179e-49 | 2.222689e-46 |
| MsG0680031379.01 | MsG0780037965.01 | 0.829582 | 4.749941e-55 | 4.881831e-52 |
| MsG0680034230.01 | MsG0780037965.01 | 0.806700 | 7.243033e-50 | 3.957691e-47 |
| MsG0480018653.01 | MsG0780037965.01 | 0.801983 | 6.959106e-49 | 3.369520e-46 |
| MsG0480018883.01 | MsG0780037965.01 | 0.829273 | 5.644123e-55 | 5.749763e-52 |
| MsG0480020002.01 | MsG0780037965.01 | 0.801050 | 1.081239e-48 | 5.113555e-46 |
| MsG0480020025.01 | MsG0780037965.01 | 0.806355 | 8.563758e-50 | 4.638245e-47 |
| MsG0480021189.01 | MsG0780037965.01 | 0.800488 | 1.407686e-48 | 6.562862e-46 |
| MsG0480021558.01 | MsG0780037965.01 | 0.832713 | 8.080161e-56 | 9.105869e-53 |
| MsG0480021869.01 | MsG0780037965.01 | 0.823962 | 1.044285e-53 | 9.126226e-51 |
| MsG0480021925.01 | MsG0780037965.01 | 0.820409 | 6.965678e-53 | 5.507386e-50 |
| MsG0480022068.01 | MsG0780037965.01 | 0.826052 | 3.351441e-54 | 3.108744e-51 |
| MsG0480023251.01 | MsG0780037965.01 | 0.817843 | 2.672059e-52 | 1.967704e-49 |
| MsG0480023489.01 | MsG0780037965.01 | 0.814114 | 1.817027e-51 | 1.208513e-48 |
| MsG0580024495.01 | MsG0780037965.01 | 0.801530 | 8.622628e-49 | 4.127377e-46 |
| MsG0580024552.01 | MsG0780037965.01 | 0.834340 | 3.170990e-56 | 3.752280e-53 |
| MsG0580025182.01 | MsG0780037965.01 | -0.801800 | 7.589076e-49 | 3.657604e-46 |
| MsG0580025467.01 | MsG0780037965.01 | 0.820310 | 7.336945e-53 | 5.784780e-50 |
| MsG0580025987.01 | MsG0780037965.01 | 0.804387 | 2.214180e-49 | 1.140120e-46 |
| MsG0380015590.01 | MsG0780037965.01 | 0.802208 | 6.255591e-49 | 3.046306e-46 |
| MsG0380016285.01 | MsG0780037965.01 | 0.829020 | 6.501208e-55 | 6.572103e-52 |
| MsG0380017176.01 | MsG0780037965.01 | 0.807980 | 3.876996e-50 | 2.190169e-47 |
| MsG0380017461.01 | MsG0780037965.01 | 0.817372 | 3.412633e-52 | 2.480815e-49 |
| MsG0380017543.01 | MsG0780037965.01 | 0.809513 | 1.823466e-50 | 1.072733e-47 |
| MsG0380018075.01 | MsG0780037965.01 | 0.801992 | 6.929688e-49 | 3.356077e-46 |
| MsG0480018183.01 | MsG0780037965.01 | 0.802989 | 4.317730e-49 | 2.144824e-46 |
| MsG0480018236.01 | MsG0780037965.01 | 0.829901 | 3.970657e-55 | 4.119446e-52 |
| MsG0580027766.01 | MsG0780037965.01 | 0.804947 | 1.691399e-49 | 8.836739e-47 |
| MsG0580028428.01 | MsG0780037965.01 | 0.803765 | 2.982114e-49 | 1.511236e-46 |
| MsG0580029925.01 | MsG0780037965.01 | 0.810556 | 1.086961e-50 | 6.572586e-48 |
| MsG0280006770.01 | MsG0780037965.01 | 0.818708 | 1.702180e-52 | 1.283638e-49 |
| MsG0280008112.01 | MsG0780037965.01 | 0.804952 | 1.687043e-49 | 8.815194e-47 |
| MsG0280008894.01 | MsG0780037965.01 | 0.815495 | 8.978095e-52 | 6.199966e-49 |
| MsG0780036128.01 | MsG0780037965.01 | 0.810563 | 1.083432e-50 | 6.552455e-48 |
| MsG0780037457.01 | MsG0780037965.01 | 0.806505 | 7.963691e-50 | 4.329857e-47 |
| MsG0780037964.01 | MsG0780037965.01 | 0.815250 | 1.017759e-51 | 6.980482e-49 |
| MsG0780037965.01 | MsG0780039178.01 | 0.805438 | 1.334930e-49 | 7.062436e-47 |
| MsG0780037965.01 | MsG0780039631.01 | 0.817004 | 4.127790e-52 | 2.970740e-49 |
| MsG0780037965.01 | MsG0780039867.01 | -0.826043 | 3.368417e-54 | 3.123664e-51 |
| MsG0780037965.01 | MsG0780040576.01 | -0.826897 | 2.108359e-54 | 2.003523e-51 |
| MsG0780037965.01 | MsG0780040596.01 | 0.824986 | 5.996132e-54 | 5.395739e-51 |
| MsG0780037965.01 | MsG0780040888.01 | 0.810617 | 1.054611e-50 | 6.387441e-48 |
| MsG0780037965.01 | MsG0780041507.01 | 0.825117 | 5.581813e-54 | 5.041632e-51 |
| MsG0780037965.01 | MsG0880041861.01 | 0.805166 | 1.521809e-49 | 7.995210e-47 |
| MsG0780037965.01 | MsG0880042435.01 | -0.802785 | 4.756686e-49 | 2.350877e-46 |
| MsG0780037965.01 | MsG0880044266.01 | 0.801962 | 7.028403e-49 | 3.401241e-46 |
| MsG0780037965.01 | MsG0880044728.01 | 0.808746 | 2.661788e-50 | 1.534205e-47 |
| MsG0780037965.01 | MsG0880045117.01 | 0.810000 | 1.432388e-50 | 8.536196e-48 |
| MsG0780037965.01 | MsG0880045896.01 | 0.802718 | 4.911580e-49 | 2.423227e-46 |
| MsG0780037965.01 | MsG0880045937.01 | 0.800432 | 1.445196e-48 | 6.728336e-46 |
| MsG0780037965.01 | MsG0880046620.01 | 0.813021 | 3.159386e-51 | 2.039987e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037965.01.T01 | MTR_1g073380 | 90.466 | 451 | 39 | 2 | 36 | 485 | 145 | 592 | 0.0 | 826 |
| MsG0780037965.01.T01 | MTR_1g073380 | 87.879 | 33 | 4 | 0 | 1 | 33 | 1 | 33 | 1.62e-11 | 67.0 |
| MsG0780037965.01.T01 | MTR_1g073530 | 86.696 | 451 | 46 | 3 | 36 | 485 | 145 | 582 | 0.0 | 770 |
| MsG0780037965.01.T01 | MTR_1g073530 | 90.909 | 33 | 3 | 0 | 1 | 33 | 1 | 33 | 2.59e-11 | 66.2 |
| MsG0780037965.01.T01 | MTR_1g073590 | 86.130 | 447 | 46 | 5 | 40 | 485 | 148 | 579 | 0.0 | 748 |
| MsG0780037965.01.T01 | MTR_1g073590 | 90.909 | 33 | 3 | 0 | 1 | 33 | 1 | 33 | 5.75e-12 | 68.6 |
| MsG0780037965.01.T01 | MTR_8g098605 | 68.723 | 470 | 101 | 5 | 38 | 485 | 145 | 590 | 0.0 | 622 |
| MsG0780037965.01.T01 | MTR_8g098645 | 69.108 | 314 | 77 | 4 | 192 | 485 | 27 | 340 | 3.64e-148 | 427 |
| MsG0780037965.01.T01 | MTR_8g098635 | 81.250 | 192 | 35 | 1 | 294 | 484 | 99 | 290 | 4.59e-108 | 323 |
| MsG0780037965.01.T01 | MTR_8g098635 | 67.901 | 81 | 26 | 0 | 146 | 226 | 15 | 95 | 1.17e-26 | 109 |
| MsG0780037965.01.T01 | MTR_8g098635 | 81.250 | 192 | 35 | 1 | 294 | 484 | 182 | 373 | 1.01e-106 | 323 |
| MsG0780037965.01.T01 | MTR_8g098635 | 60.185 | 108 | 26 | 1 | 136 | 226 | 71 | 178 | 7.16e-29 | 117 |
| MsG0780037965.01.T01 | MTR_6g071350 | 52.695 | 334 | 99 | 9 | 66 | 391 | 92 | 374 | 4.71e-86 | 270 |
| MsG0780037965.01.T01 | MTR_0259s0060 | 64.088 | 181 | 17 | 3 | 287 | 466 | 14 | 147 | 4.27e-68 | 216 |
| MsG0780037965.01.T01 | MTR_8g098655 | 65.143 | 175 | 42 | 3 | 36 | 192 | 136 | 309 | 6.78e-62 | 204 |
| MsG0780037965.01.T01 | MTR_5g048010 | 46.526 | 331 | 115 | 10 | 74 | 391 | 8 | 289 | 2.08e-56 | 190 |
| MsG0780037965.01.T01 | MTR_7g078120 | 36.170 | 329 | 165 | 9 | 146 | 464 | 273 | 566 | 4.02e-54 | 191 |
| MsG0780037965.01.T01 | MTR_7g078120 | 36.170 | 329 | 165 | 9 | 146 | 464 | 273 | 566 | 1.00e-53 | 191 |
| MsG0780037965.01.T01 | MTR_1g073430 | 91.111 | 90 | 8 | 0 | 36 | 125 | 74 | 163 | 1.12e-49 | 167 |
| MsG0780037965.01.T01 | MTR_8g028905 | 44.624 | 186 | 99 | 3 | 289 | 470 | 408 | 593 | 2.01e-44 | 165 |
| MsG0780037965.01.T01 | MTR_1g073420 | 91.429 | 70 | 5 | 1 | 417 | 485 | 59 | 128 | 2.83e-37 | 133 |
| MsG0780037965.01.T01 | MTR_1g073420 | 54.023 | 87 | 6 | 2 | 195 | 281 | 3 | 55 | 2.89e-16 | 75.5 |
| MsG0780037965.01.T01 | MTR_7g066890 | 35.882 | 170 | 101 | 2 | 289 | 452 | 194 | 361 | 3.91e-26 | 109 |
| MsG0780037965.01.T01 | MTR_3g023780 | 37.255 | 204 | 111 | 5 | 267 | 457 | 127 | 326 | 7.16e-26 | 110 |
| MsG0780037965.01.T01 | MTR_7g066890 | 35.882 | 170 | 101 | 2 | 289 | 452 | 296 | 463 | 3.40e-25 | 108 |
| MsG0780037965.01.T01 | MTR_6g071355 | 57.732 | 97 | 21 | 2 | 380 | 475 | 1 | 78 | 3.21e-24 | 96.3 |
| MsG0780037965.01.T01 | MTR_7g066880 | 30.000 | 170 | 111 | 3 | 289 | 452 | 186 | 353 | 1.54e-16 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037965.01.T01 | AT4G11400 | 48.000 | 200 | 96 | 4 | 289 | 485 | 374 | 568 | 6.62e-52 | 185 |
| MsG0780037965.01.T01 | AT4G11400 | 48.000 | 200 | 96 | 4 | 289 | 485 | 374 | 568 | 6.62e-52 | 185 |
| MsG0780037965.01.T01 | AT2G46040 | 39.779 | 181 | 105 | 2 | 281 | 458 | 352 | 531 | 2.14e-34 | 136 |
| MsG0780037965.01.T01 | AT2G46040 | 39.779 | 181 | 105 | 2 | 281 | 458 | 352 | 531 | 2.14e-34 | 136 |
| MsG0780037965.01.T01 | AT2G46040 | 39.779 | 181 | 105 | 2 | 281 | 458 | 366 | 545 | 2.22e-34 | 136 |
| MsG0780037965.01.T01 | AT5G04110 | 36.646 | 161 | 90 | 4 | 289 | 438 | 362 | 521 | 3.16e-25 | 109 |
| MsG0780037965.01.T01 | AT5G04110 | 36.646 | 161 | 90 | 4 | 289 | 438 | 361 | 520 | 3.33e-25 | 109 |
| MsG0780037965.01.T01 | AT5G04110 | 36.646 | 161 | 90 | 4 | 289 | 438 | 361 | 520 | 3.33e-25 | 109 |
| MsG0780037965.01.T01 | AT1G26580 | 30.876 | 217 | 130 | 4 | 267 | 465 | 47 | 261 | 3.61e-23 | 102 |
| MsG0780037965.01.T01 | AT1G26580 | 30.876 | 217 | 130 | 4 | 267 | 465 | 113 | 327 | 4.83e-23 | 102 |
| MsG0780037965.01.T01 | AT1G26580 | 30.876 | 217 | 130 | 4 | 267 | 465 | 113 | 327 | 4.83e-23 | 102 |
| MsG0780037965.01.T01 | AT1G13880 | 36.464 | 181 | 101 | 5 | 287 | 457 | 127 | 303 | 3.25e-21 | 96.3 |
| MsG0780037965.01.T01 | AT1G13880 | 36.464 | 181 | 101 | 5 | 287 | 457 | 126 | 302 | 3.50e-21 | 96.3 |
| MsG0780037965.01.T01 | AT2G03470 | 39.716 | 141 | 81 | 3 | 327 | 463 | 164 | 304 | 3.84e-21 | 96.3 |
| MsG0780037965.01.T01 | AT2G03470 | 39.716 | 141 | 81 | 3 | 327 | 463 | 163 | 303 | 4.11e-21 | 96.3 |
| MsG0780037965.01.T01 | AT1G13880 | 36.464 | 181 | 101 | 5 | 287 | 457 | 136 | 312 | 4.43e-21 | 95.9 |
| MsG0780037965.01.T01 | AT5G04110 | 36.986 | 146 | 79 | 5 | 289 | 422 | 361 | 505 | 5.56e-18 | 87.0 |
Find 113 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTTGATGGTTCCGTTAA+TGG | 0.068856 | 7:-37184948 | None:intergenic |
| TACCATCACCGTTGACATTT+TGG | 0.128019 | 7:-37184806 | None:intergenic |
| CCATTGGGGATTTGATAAAA+TGG | 0.180493 | 7:+37186262 | MsG0780037965.01.T01:CDS |
| CAATGGACTGGTGTAGTTTA+TGG | 0.202655 | 7:+37186044 | MsG0780037965.01.T01:CDS |
| TCCGTTAATGGTTGAGTTAC+AGG | 0.225152 | 7:-37184936 | None:intergenic |
| TTATACTCCTTCCCCTTTGA+TGG | 0.227519 | 7:-37184960 | None:intergenic |
| TCACGAGAATCATCACTAAA+TGG | 0.231296 | 7:-37185978 | None:intergenic |
| TAAAACTTTAATTTCACTTT+TGG | 0.247070 | 7:+37186705 | MsG0780037965.01.T01:three_prime_UTR |
| CACCGTCACATTTGTTATTT+CGG | 0.268330 | 7:-37184782 | None:intergenic |
| GATGATGACGAAGTCGAATT+TGG | 0.269756 | 7:+37186503 | MsG0780037965.01.T01:CDS |
| CTGCAAGTTCTTCCTCAAAA+TGG | 0.277274 | 7:-37186620 | None:intergenic |
| TCTTCAGTCACAGCTGCATT+TGG | 0.293597 | 7:-37185942 | None:intergenic |
| TGATGAAGAAAAGACATTTA+AGG | 0.313271 | 7:+37186313 | MsG0780037965.01.T01:CDS |
| TCAGTAAAAGTTTCAGCTTC+AGG | 0.316688 | 7:-37184528 | None:intergenic |
| CATCATAAAGCACATTGATT+TGG | 0.322571 | 7:+37184719 | MsG0780037965.01.T01:CDS |
| TTGGATGATGATCCATAGTT+TGG | 0.324832 | 7:-37185053 | None:intergenic |
| GATGAAGCTGAAGTTTGAAT+TGG | 0.326776 | 7:+37186226 | MsG0780037965.01.T01:CDS |
| GGTCTTGAATCATCTTTAAC+AGG | 0.327003 | 7:-37186101 | None:intergenic |
| TGAATTTGAGACGTAGTAAA+AGG | 0.331609 | 7:+37185781 | MsG0780037965.01.T01:CDS |
| TTAATTCTCGCAAACGTAAA+CGG | 0.334594 | 7:+37184907 | MsG0780037965.01.T01:CDS |
| GCCTGTAACTCAACCATTAA+CGG | 0.341226 | 7:+37184935 | MsG0780037965.01.T01:CDS |
| TTCAAAATGCTCGGACTAAA+CGG | 0.357502 | 7:-37186752 | None:intergenic |
| TTCTTCTTGATCACAACATC+TGG | 0.358660 | 7:-37185873 | None:intergenic |
| CAAGAGTGATGGTTATTTAT+CGG | 0.364961 | 7:+37184749 | MsG0780037965.01.T01:CDS |
| AATCGTTAGGCACACGAGTA+TGG | 0.366764 | 7:+37186078 | MsG0780037965.01.T01:CDS |
| GAAGTCGAATTTGGATCTTT+TGG | 0.370187 | 7:+37186512 | MsG0780037965.01.T01:CDS |
| TTATAAAAGTTCATGGAAAA+CGG | 0.374418 | 7:+37184489 | None:intergenic |
| AGTTTGGTTCTGCATGCTTT+CGG | 0.375513 | 7:-37185037 | None:intergenic |
| GCTGTTTATTGCATCCTCCT+TGG | 0.375588 | 7:+37186648 | MsG0780037965.01.T01:three_prime_UTR |
| TAATTCTCGCAAACGTAAAC+GGG | 0.384199 | 7:+37184908 | MsG0780037965.01.T01:CDS |
| CACTCCTTGAATTCAGTTGA+TGG | 0.388773 | 7:-37186563 | None:intergenic |
| CGTGATAAGTTTGTTTCTGT+TGG | 0.390129 | 7:+37185996 | MsG0780037965.01.T01:CDS |
| AACCGCCTCTTGTGCGGAAA+CGG | 0.397919 | 7:+37184875 | MsG0780037965.01.T01:CDS |
| AATGGACTGGTGTAGTTTAT+GGG | 0.405764 | 7:+37186045 | MsG0780037965.01.T01:CDS |
| CATTGGGGATTTGATAAAAT+GGG | 0.415280 | 7:+37186263 | MsG0780037965.01.T01:CDS |
| AAACTACACCAGTCCATTGC+GGG | 0.425596 | 7:-37186040 | None:intergenic |
| GTGTCCATCAACTGAATTCA+AGG | 0.433131 | 7:+37186559 | MsG0780037965.01.T01:CDS |
| TTTCTTCATCACCAGTCCAT+TGG | 0.435383 | 7:-37186301 | None:intergenic |
| AAGCATGCAGAACCAAACTA+TGG | 0.435744 | 7:+37185041 | MsG0780037965.01.T01:CDS |
| TATAAAAGTTCATGGAAAAC+GGG | 0.438007 | 7:+37184490 | None:intergenic |
| GTCTCTTAAGTTGCATGGTA+TGG | 0.438652 | 7:+37185812 | MsG0780037965.01.T01:CDS |
| TGATGTTACTCGATTCTAAC+GGG | 0.439420 | 7:-37184701 | None:intergenic |
| CGTCCAGTTACTTTCAAAAG+AGG | 0.446172 | 7:+37186387 | MsG0780037965.01.T01:CDS |
| ATGAAGCTGAAGTTTGAATT+GGG | 0.447468 | 7:+37186227 | MsG0780037965.01.T01:CDS |
| TCGTGCCAAGTATGAGGATT+CGG | 0.451587 | 7:+37185734 | MsG0780037965.01.T01:CDS |
| TTTCAGCTTCAGGCCGATCA+AGG | 0.454502 | 7:-37184518 | None:intergenic |
| GTTTATTGCATCCTCCTTGG+AGG | 0.458902 | 7:+37186651 | MsG0780037965.01.T01:three_prime_UTR |
| GATTGCATATTGCTGCAAAC+AGG | 0.460811 | 7:+37186204 | MsG0780037965.01.T01:CDS |
| AAAATTGGGCACTGGTGTTA+AGG | 0.461038 | 7:+37184845 | MsG0780037965.01.T01:CDS |
| TCAAAGGGGAAGGAGTATAA+AGG | 0.465628 | 7:+37184963 | MsG0780037965.01.T01:CDS |
| ACAAGATCTGTTTCAGTAGT+AGG | 0.467920 | 7:-37186122 | None:intergenic |
| TTTACTGAAATTCATAGAAA+CGG | 0.475299 | 7:+37184543 | MsG0780037965.01.T01:CDS |
| AGTCCTATGGAGAAAACAAC+TGG | 0.476468 | 7:+37185846 | MsG0780037965.01.T01:CDS |
| TATGAGGATTCGGTTTCTCT+TGG | 0.478939 | 7:+37185744 | MsG0780037965.01.T01:CDS |
| ACCATTAACGGAACCATCAA+AGG | 0.486128 | 7:+37184947 | MsG0780037965.01.T01:CDS |
| ACTACTGAAACAGATCTTGT+TGG | 0.488100 | 7:+37186125 | MsG0780037965.01.T01:CDS |
| CACGAGAATCATCACTAAAT+GGG | 0.488835 | 7:-37185977 | None:intergenic |
| TCCATTGCGGGACTTCCACT+TGG | 0.490081 | 7:-37186028 | None:intergenic |
| GGGACTTCCACTTGGAAAAG+AGG | 0.495364 | 7:-37186020 | None:intergenic |
| GTGGAAGTCCCGCAATGGAC+TGG | 0.500938 | 7:+37186032 | MsG0780037965.01.T01:CDS |
| ACCATAAACTTCAAAATGCT+CGG | 0.505596 | 7:-37186761 | None:intergenic |
| AATGTCAACGGTGATGGTAA+TGG | 0.506261 | 7:+37184810 | MsG0780037965.01.T01:CDS |
| CCATTAACGGAACCATCAAA+GGG | 0.513675 | 7:+37184948 | MsG0780037965.01.T01:CDS |
| CTCCGTTTCCGCACAAGAGG+CGG | 0.517041 | 7:-37184877 | None:intergenic |
| GGGAGTGACTCTAAATCGTT+AGG | 0.521416 | 7:+37186065 | MsG0780037965.01.T01:CDS |
| GGTGCATCGTGCCAAGTATG+AGG | 0.522667 | 7:+37185728 | MsG0780037965.01.T01:CDS |
| CTCTTGTGCGGAAACGGAGA+AGG | 0.532423 | 7:+37184881 | MsG0780037965.01.T01:CDS |
| GAAGGAGTATAAAGGAGGCC+AGG | 0.532750 | 7:+37184971 | MsG0780037965.01.T01:CDS |
| GCATCTGAACAGAAATGTCC+TGG | 0.538414 | 7:-37184989 | None:intergenic |
| TCTATGTCTCTTAAGTTGCA+TGG | 0.539525 | 7:+37185807 | MsG0780037965.01.T01:CDS |
| CTTCTCCGTTTCCGCACAAG+AGG | 0.540441 | 7:-37184880 | None:intergenic |
| ATAGTGCAGTTCAAAACCTT+GGG | 0.542469 | 7:+37184592 | MsG0780037965.01.T01:CDS |
| CTATCAGAATCGAGTGACTT+CGG | 0.542718 | 7:+37186466 | MsG0780037965.01.T01:CDS |
| GCGAGGAAGTTTCACTCCAA+TGG | 0.542815 | 7:+37186285 | MsG0780037965.01.T01:CDS |
| AGAAACCGAATCCTCATACT+TGG | 0.546181 | 7:-37185739 | None:intergenic |
| GGGATTTGATAAAATGGGCG+AGG | 0.561801 | 7:+37186268 | MsG0780037965.01.T01:CDS |
| ATAAATAACCATCACTCTTG+TGG | 0.562805 | 7:-37184746 | None:intergenic |
| GTCCAAAATGTCAACGGTGA+TGG | 0.566507 | 7:+37184804 | MsG0780037965.01.T01:CDS |
| ACATTTCTGTTCAGATGCTG+AGG | 0.568396 | 7:+37184994 | MsG0780037965.01.T01:CDS |
| GATAGTGCAGTTCAAAACCT+TGG | 0.570558 | 7:+37184591 | MsG0780037965.01.T01:CDS |
| TTGGTTAACCACAAGAGTGA+TGG | 0.572454 | 7:+37184738 | MsG0780037965.01.T01:CDS |
| TTATGCTTTACAGAAGGTGA+AGG | 0.574719 | 7:+37185707 | MsG0780037965.01.T01:intron |
| ATGATGTTACTCGATTCTAA+CGG | 0.575917 | 7:-37184702 | None:intergenic |
| GTCTCAAATTCATCGTACCT+TGG | 0.576475 | 7:-37185770 | None:intergenic |
| TTCAGCTTCAGGCCGATCAA+GGG | 0.582627 | 7:-37184517 | None:intergenic |
| TCCAAGTGGAAGTCCCGCAA+TGG | 0.584534 | 7:+37186027 | MsG0780037965.01.T01:CDS |
| GAAGTTTCACTCCAATGGAC+TGG | 0.584625 | 7:+37186290 | MsG0780037965.01.T01:CDS |
| TGATATAACCGCCTCTTGTG+CGG | 0.584809 | 7:+37184869 | MsG0780037965.01.T01:CDS |
| GAAACAGATCTTGTTGGTAG+AGG | 0.588593 | 7:+37186131 | MsG0780037965.01.T01:CDS |
| AAAACGGGTCATCCCTTGAT+CGG | 0.589892 | 7:+37184505 | MsG0780037965.01.T01:CDS |
| AACGGTGGTTGTCTTGTCGA+GGG | 0.592172 | 7:+37184561 | MsG0780037965.01.T01:CDS |
| AACGGAACCATCAAAGGGGA+AGG | 0.593313 | 7:+37184953 | MsG0780037965.01.T01:CDS |
| TTACAGCATAAATGTTGTGG+GGG | 0.594908 | 7:-37186685 | None:intergenic |
| AACCGAAATAACAAATGTGA+CGG | 0.598410 | 7:+37184780 | MsG0780037965.01.T01:CDS |
| GGTTGGCAGCGCCTCCAAGG+AGG | 0.600805 | 7:-37186662 | None:intergenic |
| AAACGGTGGTTGTCTTGTCG+AGG | 0.603053 | 7:+37184560 | MsG0780037965.01.T01:CDS |
| ACAGCATAAATGTTGTGGGG+GGG | 0.609091 | 7:-37186683 | None:intergenic |
| AGTGTTCAGAGAACAAGTAA+TGG | 0.612428 | 7:+37186582 | MsG0780037965.01.T01:CDS |
| TCGGTTTCTCTTGGTCACCA+AGG | 0.612735 | 7:+37185753 | MsG0780037965.01.T01:CDS |
| TTTACAGCATAAATGTTGTG+GGG | 0.616994 | 7:-37186686 | None:intergenic |
| GCAATGAGTTCACATACCCA+AGG | 0.620152 | 7:-37184608 | None:intergenic |
| CTTGTTGGTAGAGGAAGACG+AGG | 0.623018 | 7:+37186140 | MsG0780037965.01.T01:CDS |
| TACAGCATAAATGTTGTGGG+GGG | 0.623482 | 7:-37186684 | None:intergenic |
| ACTGAAATTCATAGAAACGG+TGG | 0.632868 | 7:+37184546 | MsG0780037965.01.T01:CDS |
| AAACTATGGATCATCATCCA+AGG | 0.633710 | 7:+37185055 | MsG0780037965.01.T01:CDS |
| GAGGGCACGAGATGTTCTGT+CGG | 0.634607 | 7:+37185013 | MsG0780037965.01.T01:CDS |
| CATTTCTGTTCAGATGCTGA+GGG | 0.635466 | 7:+37184995 | MsG0780037965.01.T01:CDS |
| GTCAACGGTGATGGTAATGG+CGG | 0.639485 | 7:+37184813 | MsG0780037965.01.T01:CDS |
| TAAACTACACCAGTCCATTG+CGG | 0.655876 | 7:-37186041 | None:intergenic |
| AAAGAGGACAAGAAAAGACA+TGG | 0.658301 | 7:+37186403 | MsG0780037965.01.T01:CDS |
| GACGGTGTCCAAAATGTCAA+CGG | 0.686720 | 7:+37184798 | MsG0780037965.01.T01:CDS |
| AAGGGGAAGGAGTATAAAGG+AGG | 0.692342 | 7:+37184966 | MsG0780037965.01.T01:CDS |
| CATTAACGGAACCATCAAAG+GGG | 0.745908 | 7:+37184949 | MsG0780037965.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATAATCAAAATCTAC+CGG | + | Chr7:37185238-37185257 | MsG0780037965.01.T01:intron | 15.0% |
| !! | TATATATATATATTGCAAAC+TGG | + | Chr7:37185578-37185597 | MsG0780037965.01.T01:intron | 15.0% |
| !!! | TAAAACTTTAATTTCACTTT+TGG | + | Chr7:37186705-37186724 | MsG0780037965.01.T01:three_prime_UTR | 15.0% |
| !! | ATTCATTGAATAATCTATAG+TGG | - | Chr7:37185615-37185634 | None:intergenic | 20.0% |
| !! | TTTACTGAAATTCATAGAAA+CGG | + | Chr7:37184543-37184562 | MsG0780037965.01.T01:CDS | 20.0% |
| !!! | TTATACATGATTTTACACAT+TGG | + | Chr7:37185103-37185122 | MsG0780037965.01.T01:intron | 20.0% |
| ! | TGATGAAGAAAAGACATTTA+AGG | + | Chr7:37186313-37186332 | MsG0780037965.01.T01:CDS | 25.0% |
| ! | TGTGTAATGAAAATATACCT+TGG | - | Chr7:37185075-37185094 | None:intergenic | 25.0% |
| !! | AACTCTTTTTCTAGATCTAT+TGG | - | Chr7:37184633-37184652 | None:intergenic | 25.0% |
| !! | TGTTCCAAAAATACTTGTTT+TGG | - | Chr7:37186364-37186383 | None:intergenic | 25.0% |
| !! | TTTTACAGCATAAATGTTGT+GGG | - | Chr7:37186690-37186709 | None:intergenic | 25.0% |
| !!! | CACATCAATTAGTATTGATT+GGG | - | Chr7:37185343-37185362 | None:intergenic | 25.0% |
| !!! | CATTATTTTAGGAAAGAAAC+CGG | - | Chr7:37185260-37185279 | None:intergenic | 25.0% |
| !!! | CATTTTGAAGTTTATGGTTT+TGG | + | Chr7:37186766-37186785 | MsG0780037965.01.T01:three_prime_UTR | 25.0% |
| !!! | GTTCCAAAAATACTTGTTTT+GGG | - | Chr7:37186363-37186382 | None:intergenic | 25.0% |
| AACCGAAATAACAAATGTGA+CGG | + | Chr7:37184780-37184799 | MsG0780037965.01.T01:CDS | 30.0% | |
| AATCCAAATCATGCGATTTA+GGG | - | Chr7:37185430-37185449 | None:intergenic | 30.0% | |
| ACCATAAACTTCAAAATGCT+CGG | - | Chr7:37186764-37186783 | None:intergenic | 30.0% | |
| ATAAATAACCATCACTCTTG+TGG | - | Chr7:37184749-37184768 | None:intergenic | 30.0% | |
| ATGAAGCTGAAGTTTGAATT+GGG | + | Chr7:37186227-37186246 | MsG0780037965.01.T01:CDS | 30.0% | |
| ATGATGTTACTCGATTCTAA+CGG | - | Chr7:37184705-37184724 | None:intergenic | 30.0% | |
| CAAGAGTGATGGTTATTTAT+CGG | + | Chr7:37184749-37184768 | MsG0780037965.01.T01:CDS | 30.0% | |
| CATTGGGGATTTGATAAAAT+GGG | + | Chr7:37186263-37186282 | MsG0780037965.01.T01:CDS | 30.0% | |
| CCTTTAGATTTGAGCAAAAA+AGG | - | Chr7:37184662-37184681 | None:intergenic | 30.0% | |
| GAAACTTTATGCTTTACAGA+AGG | + | Chr7:37185701-37185720 | MsG0780037965.01.T01:intron | 30.0% | |
| GATTATTCAATGAATCACTG+TGG | + | Chr7:37185620-37185639 | MsG0780037965.01.T01:intron | 30.0% | |
| TTAATTCTCGCAAACGTAAA+CGG | + | Chr7:37184907-37184926 | MsG0780037965.01.T01:CDS | 30.0% | |
| TTTACAGCATAAATGTTGTG+GGG | - | Chr7:37186689-37186708 | None:intergenic | 30.0% | |
| ! | CATCATAAAGCACATTGATT+TGG | + | Chr7:37184719-37184738 | MsG0780037965.01.T01:CDS | 30.0% |
| ! | GTTTTACAGCATAAATGTTG+TGG | - | Chr7:37186691-37186710 | None:intergenic | 30.0% |
| ! | TGAATTTGAGACGTAGTAAA+AGG | + | Chr7:37185781-37185800 | MsG0780037965.01.T01:CDS | 30.0% |
| !! | GCACATCAATTAGTATTGAT+TGG | - | Chr7:37185344-37185363 | None:intergenic | 30.0% |
| !! | TGATTTGATAAGCCATTTTG+AGG | + | Chr7:37186608-37186627 | MsG0780037965.01.T01:three_prime_UTR | 30.0% |
| !!! | AAAAATACTTGTTTTGGGAG+GGG | - | Chr7:37186358-37186377 | None:intergenic | 30.0% |
| !!! | CAAAAATACTTGTTTTGGGA+GGG | - | Chr7:37186359-37186378 | None:intergenic | 30.0% |
| !!! | CCTTTTTTGCTCAAATCTAA+AGG | + | Chr7:37184659-37184678 | MsG0780037965.01.T01:CDS | 30.0% |
| AAACTATGGATCATCATCCA+AGG | + | Chr7:37185055-37185074 | MsG0780037965.01.T01:CDS | 35.0% | |
| AAAGAGGACAAGAAAAGACA+TGG | + | Chr7:37186403-37186422 | MsG0780037965.01.T01:CDS | 35.0% | |
| ACAAGATCTGTTTCAGTAGT+AGG | - | Chr7:37186125-37186144 | None:intergenic | 35.0% | |
| ACTACTGAAACAGATCTTGT+TGG | + | Chr7:37186125-37186144 | MsG0780037965.01.T01:CDS | 35.0% | |
| ACTGAAATTCATAGAAACGG+TGG | + | Chr7:37184546-37184565 | MsG0780037965.01.T01:CDS | 35.0% | |
| AGTGTTCAGAGAACAAGTAA+TGG | + | Chr7:37186582-37186601 | MsG0780037965.01.T01:CDS | 35.0% | |
| ATAGTGCAGTTCAAAACCTT+GGG | + | Chr7:37184592-37184611 | MsG0780037965.01.T01:CDS | 35.0% | |
| ATCCAAATCATGCGATTTAG+GGG | - | Chr7:37185429-37185448 | None:intergenic | 35.0% | |
| ATTGATGTGCGTATCTTTGT+TGG | + | Chr7:37185354-37185373 | MsG0780037965.01.T01:intron | 35.0% | |
| CACGAGAATCATCACTAAAT+GGG | - | Chr7:37185980-37185999 | None:intergenic | 35.0% | |
| CCATTCATGTGAAAACATTC+TGG | - | Chr7:37185155-37185174 | None:intergenic | 35.0% | |
| CCATTGGGGATTTGATAAAA+TGG | + | Chr7:37186262-37186281 | MsG0780037965.01.T01:CDS | 35.0% | |
| GAATCCAAATCATGCGATTT+AGG | - | Chr7:37185431-37185450 | None:intergenic | 35.0% | |
| GATGAAGCTGAAGTTTGAAT+TGG | + | Chr7:37186226-37186245 | MsG0780037965.01.T01:CDS | 35.0% | |
| GGAATCAGAAAAAAGTCCTA+TGG | + | Chr7:37185833-37185852 | MsG0780037965.01.T01:CDS | 35.0% | |
| GGTCTTGAATCATCTTTAAC+AGG | - | Chr7:37186104-37186123 | None:intergenic | 35.0% | |
| TAATTCTCGCAAACGTAAAC+GGG | + | Chr7:37184908-37184927 | MsG0780037965.01.T01:CDS | 35.0% | |
| TCACGAGAATCATCACTAAA+TGG | - | Chr7:37185981-37186000 | None:intergenic | 35.0% | |
| TCAGTAAAAGTTTCAGCTTC+AGG | - | Chr7:37184531-37184550 | None:intergenic | 35.0% | |
| TGATGTTACTCGATTCTAAC+GGG | - | Chr7:37184704-37184723 | None:intergenic | 35.0% | |
| TTACAGCATAAATGTTGTGG+GGG | - | Chr7:37186688-37186707 | None:intergenic | 35.0% | |
| TTATGCTTTACAGAAGGTGA+AGG | + | Chr7:37185707-37185726 | MsG0780037965.01.T01:intron | 35.0% | |
| TTCAAAATGCTCGGACTAAA+CGG | - | Chr7:37186755-37186774 | None:intergenic | 35.0% | |
| TTCTTCTTGATCACAACATC+TGG | - | Chr7:37185876-37185895 | None:intergenic | 35.0% | |
| TTGGATGATGATCCATAGTT+TGG | - | Chr7:37185056-37185075 | None:intergenic | 35.0% | |
| ! | CCAGAATGTTTTCACATGAA+TGG | + | Chr7:37185152-37185171 | MsG0780037965.01.T01:intron | 35.0% |
| ! | CCATTTTATCAAATCCCCAA+TGG | - | Chr7:37186265-37186284 | None:intergenic | 35.0% |
| ! | CCTCCCAAAACAAGTATTTT+TGG | + | Chr7:37186357-37186376 | MsG0780037965.01.T01:CDS | 35.0% |
| ! | GAAGTCGAATTTGGATCTTT+TGG | + | Chr7:37186512-37186531 | MsG0780037965.01.T01:CDS | 35.0% |
| ! | TCTATGTCTCTTAAGTTGCA+TGG | + | Chr7:37185807-37185826 | MsG0780037965.01.T01:CDS | 35.0% |
| !! | AATGGACTGGTGTAGTTTAT+GGG | + | Chr7:37186045-37186064 | MsG0780037965.01.T01:CDS | 35.0% |
| !! | ATGTGAAAACATTCTGGTTC+AGG | - | Chr7:37185149-37185168 | None:intergenic | 35.0% |
| !! | CACCGTCACATTTGTTATTT+CGG | - | Chr7:37184785-37184804 | None:intergenic | 35.0% |
| !! | CGTGATAAGTTTGTTTCTGT+TGG | + | Chr7:37185996-37186015 | MsG0780037965.01.T01:CDS | 35.0% |
| !! | CTCTTTTGAAAGTAACTGGA+CGG | - | Chr7:37186389-37186408 | None:intergenic | 35.0% |
| !! | TGTCCTCTTTTGAAAGTAAC+TGG | - | Chr7:37186393-37186412 | None:intergenic | 35.0% |
| !! | TTTGGATCTTTTGGTGGTTT+CGG | + | Chr7:37186521-37186540 | MsG0780037965.01.T01:CDS | 35.0% |
| !!! | CCAAAAATACTTGTTTTGGG+AGG | - | Chr7:37186360-37186379 | None:intergenic | 35.0% |
| !!! | TCCGAGCATTTTGAAGTTTA+TGG | + | Chr7:37186760-37186779 | MsG0780037965.01.T01:three_prime_UTR | 35.0% |
| AAGCATGCAGAACCAAACTA+TGG | + | Chr7:37185041-37185060 | MsG0780037965.01.T01:CDS | 40.0% | |
| ACATTTCTGTTCAGATGCTG+AGG | + | Chr7:37184994-37185013 | MsG0780037965.01.T01:CDS | 40.0% | |
| ACCATTAACGGAACCATCAA+AGG | + | Chr7:37184947-37184966 | MsG0780037965.01.T01:CDS | 40.0% | |
| AGAAACCGAATCCTCATACT+TGG | - | Chr7:37185742-37185761 | None:intergenic | 40.0% | |
| AGTCCTATGGAGAAAACAAC+TGG | + | Chr7:37185846-37185865 | MsG0780037965.01.T01:CDS | 40.0% | |
| CACTCCTTGAATTCAGTTGA+TGG | - | Chr7:37186566-37186585 | None:intergenic | 40.0% | |
| CATTAACGGAACCATCAAAG+GGG | + | Chr7:37184949-37184968 | MsG0780037965.01.T01:CDS | 40.0% | |
| CATTTCTGTTCAGATGCTGA+GGG | + | Chr7:37184995-37185014 | MsG0780037965.01.T01:CDS | 40.0% | |
| CCATTAACGGAACCATCAAA+GGG | + | Chr7:37184948-37184967 | MsG0780037965.01.T01:CDS | 40.0% | |
| CTATCAGAATCGAGTGACTT+CGG | + | Chr7:37186466-37186485 | MsG0780037965.01.T01:CDS | 40.0% | |
| CTGCAAGTTCTTCCTCAAAA+TGG | - | Chr7:37186623-37186642 | None:intergenic | 40.0% | |
| GATAGTGCAGTTCAAAACCT+TGG | + | Chr7:37184591-37184610 | MsG0780037965.01.T01:CDS | 40.0% | |
| GATTGCATATTGCTGCAAAC+AGG | + | Chr7:37186204-37186223 | MsG0780037965.01.T01:CDS | 40.0% | |
| GCCTGTAACTCAACCATTAA+CGG | + | Chr7:37184935-37184954 | MsG0780037965.01.T01:CDS | 40.0% | |
| GTCTCAAATTCATCGTACCT+TGG | - | Chr7:37185773-37185792 | None:intergenic | 40.0% | |
| GTGTCCATCAACTGAATTCA+AGG | + | Chr7:37186559-37186578 | MsG0780037965.01.T01:CDS | 40.0% | |
| TAAACTACACCAGTCCATTG+CGG | - | Chr7:37186044-37186063 | None:intergenic | 40.0% | |
| TACAGCATAAATGTTGTGGG+GGG | - | Chr7:37186687-37186706 | None:intergenic | 40.0% | |
| TACCCCTAAATCGCATGATT+TGG | + | Chr7:37185424-37185443 | MsG0780037965.01.T01:intron | 40.0% | |
| TCCGTTAATGGTTGAGTTAC+AGG | - | Chr7:37184939-37184958 | None:intergenic | 40.0% | |
| TGTTGGATAGCGATCACAAT+AGG | + | Chr7:37185371-37185390 | MsG0780037965.01.T01:intron | 40.0% | |
| TTATACTCCTTCCCCTTTGA+TGG | - | Chr7:37184963-37184982 | None:intergenic | 40.0% | |
| TTGGTTAACCACAAGAGTGA+TGG | + | Chr7:37184738-37184757 | MsG0780037965.01.T01:CDS | 40.0% | |
| TTTCTTCATCACCAGTCCAT+TGG | - | Chr7:37186304-37186323 | None:intergenic | 40.0% | |
| ! | AATGTCAACGGTGATGGTAA+TGG | + | Chr7:37184810-37184829 | MsG0780037965.01.T01:CDS | 40.0% |
| ! | CATGATTTGGATTCTGCTGT+GGG | + | Chr7:37185437-37185456 | MsG0780037965.01.T01:intron | 40.0% |
| ! | CGTCCAGTTACTTTCAAAAG+AGG | + | Chr7:37186387-37186406 | MsG0780037965.01.T01:CDS | 40.0% |
| ! | GAAACAGATCTTGTTGGTAG+AGG | + | Chr7:37186131-37186150 | MsG0780037965.01.T01:CDS | 40.0% |
| ! | GATGATGACGAAGTCGAATT+TGG | + | Chr7:37186503-37186522 | MsG0780037965.01.T01:CDS | 40.0% |
| ! | GGGTTCTGCATTTTACCATT+GGG | + | Chr7:37186247-37186266 | MsG0780037965.01.T01:CDS | 40.0% |
| ! | GGTTCTGCATTTTACCATTG+GGG | + | Chr7:37186248-37186267 | MsG0780037965.01.T01:CDS | 40.0% |
| ! | GTCGAATTTGGATCTTTTGG+TGG | + | Chr7:37186515-37186534 | MsG0780037965.01.T01:CDS | 40.0% |
| ! | GTCTCTTAAGTTGCATGGTA+TGG | + | Chr7:37185812-37185831 | MsG0780037965.01.T01:CDS | 40.0% |
| ! | TACCATCACCGTTGACATTT+TGG | - | Chr7:37184809-37184828 | None:intergenic | 40.0% |
| ! | TATGAGGATTCGGTTTCTCT+TGG | + | Chr7:37185744-37185763 | MsG0780037965.01.T01:CDS | 40.0% |
| ! | TCAAAGGGGAAGGAGTATAA+AGG | + | Chr7:37184963-37184982 | MsG0780037965.01.T01:CDS | 40.0% |
| ! | TGGGTTCTGCATTTTACCAT+TGG | + | Chr7:37186246-37186265 | MsG0780037965.01.T01:CDS | 40.0% |
| !! | AAAATTGGGCACTGGTGTTA+AGG | + | Chr7:37184845-37184864 | MsG0780037965.01.T01:CDS | 40.0% |
| !! | AGTTTGGTTCTGCATGCTTT+CGG | - | Chr7:37185040-37185059 | None:intergenic | 40.0% |
| !! | CAATGGACTGGTGTAGTTTA+TGG | + | Chr7:37186044-37186063 | MsG0780037965.01.T01:CDS | 40.0% |
| !! | CGGTTTCAAGGCTTTTTAGT+TGG | - | Chr7:37185489-37185508 | None:intergenic | 40.0% |
| !! | CGTGCAAACTGGTTTGTAAA+AGG | + | Chr7:37185516-37185535 | MsG0780037965.01.T01:intron | 40.0% |
| !! | TTGCCAGTTGTTTTCTCCAT+AGG | - | Chr7:37185852-37185871 | None:intergenic | 40.0% |
| !! | TTGGATCTTTTGGTGGTTTC+GGG | + | Chr7:37186522-37186541 | MsG0780037965.01.T01:CDS | 40.0% |
| !! | TTTTGAGGAAGAACTTGCAG+AGG | + | Chr7:37186623-37186642 | MsG0780037965.01.T01:three_prime_UTR | 40.0% |
| !!! | CTTTTTTCTCACAGCTGCTT+TGG | - | Chr7:37185910-37185929 | None:intergenic | 40.0% |
| AAAACGGGTCATCCCTTGAT+CGG | + | Chr7:37184505-37184524 | MsG0780037965.01.T01:CDS | 45.0% | |
| AAACTACACCAGTCCATTGC+GGG | - | Chr7:37186043-37186062 | None:intergenic | 45.0% | |
| AATCGTTAGGCACACGAGTA+TGG | + | Chr7:37186078-37186097 | MsG0780037965.01.T01:CDS | 45.0% | |
| ACAGCATAAATGTTGTGGGG+GGG | - | Chr7:37186686-37186705 | None:intergenic | 45.0% | |
| ACCAGTTTGCACGATAGTGT+CGG | - | Chr7:37185509-37185528 | None:intergenic | 45.0% | |
| GAAGTTTCACTCCAATGGAC+TGG | + | Chr7:37186290-37186309 | MsG0780037965.01.T01:CDS | 45.0% | |
| GACGATGAAAAATTGGGCAC+TGG | + | Chr7:37184837-37184856 | MsG0780037965.01.T01:CDS | 45.0% | |
| GACGGTGTCCAAAATGTCAA+CGG | + | Chr7:37184798-37184817 | MsG0780037965.01.T01:CDS | 45.0% | |
| GCAATGAGTTCACATACCCA+AGG | - | Chr7:37184611-37184630 | None:intergenic | 45.0% | |
| GCATCTGAACAGAAATGTCC+TGG | - | Chr7:37184992-37185011 | None:intergenic | 45.0% | |
| GCTGTTTATTGCATCCTCCT+TGG | + | Chr7:37186648-37186667 | MsG0780037965.01.T01:three_prime_UTR | 45.0% | |
| GGGAGTGACTCTAAATCGTT+AGG | + | Chr7:37186065-37186084 | MsG0780037965.01.T01:CDS | 45.0% | |
| GGGATTTGATAAAATGGGCG+AGG | + | Chr7:37186268-37186287 | MsG0780037965.01.T01:CDS | 45.0% | |
| GTCCAAAATGTCAACGGTGA+TGG | + | Chr7:37184804-37184823 | MsG0780037965.01.T01:CDS | 45.0% | |
| GTTTATTGCATCCTCCTTGG+AGG | + | Chr7:37186651-37186670 | MsG0780037965.01.T01:three_prime_UTR | 45.0% | |
| TCGTGCCAAGTATGAGGATT+CGG | + | Chr7:37185734-37185753 | MsG0780037965.01.T01:CDS | 45.0% | |
| TCTTCAGTCACAGCTGCATT+TGG | - | Chr7:37185945-37185964 | None:intergenic | 45.0% | |
| TGATATAACCGCCTCTTGTG+CGG | + | Chr7:37184869-37184888 | MsG0780037965.01.T01:CDS | 45.0% | |
| ! | AAGGGGAAGGAGTATAAAGG+AGG | + | Chr7:37184966-37184985 | MsG0780037965.01.T01:CDS | 45.0% |
| ! | CCCTTTGATGGTTCCGTTAA+TGG | - | Chr7:37184951-37184970 | None:intergenic | 45.0% |
| ! | GCATGATTTGGATTCTGCTG+TGG | + | Chr7:37185436-37185455 | MsG0780037965.01.T01:intron | 45.0% |
| ! | GCTTGCTGCTAACTGCTATA+GGG | + | Chr7:37185302-37185321 | MsG0780037965.01.T01:intron | 45.0% |
| ! | TGTTGGTCCTCTTTTCCAAG+TGG | + | Chr7:37186013-37186032 | MsG0780037965.01.T01:CDS | 45.0% |
| !! | AGCTTGCTGCTAACTGCTAT+AGG | + | Chr7:37185301-37185320 | MsG0780037965.01.T01:intron | 45.0% |
| !!! | AATTTTATATACATTATTTT+AGG | - | Chr7:37185271-37185290 | None:intergenic | 5.0% |
| AAACGGTGGTTGTCTTGTCG+AGG | + | Chr7:37184560-37184579 | MsG0780037965.01.T01:CDS | 50.0% | |
| AACGGAACCATCAAAGGGGA+AGG | + | Chr7:37184953-37184972 | MsG0780037965.01.T01:CDS | 50.0% | |
| AACGGTGGTTGTCTTGTCGA+GGG | + | Chr7:37184561-37184580 | MsG0780037965.01.T01:CDS | 50.0% | |
| ACCGACACTATCGTGCAAAC+TGG | + | Chr7:37185505-37185524 | MsG0780037965.01.T01:intron | 50.0% | |
| CAACCTTGAAATGGACAGGG+TGG | + | Chr7:37185462-37185481 | MsG0780037965.01.T01:intron | 50.0% | |
| CATAAATGTTGTGGGGGGGT+TGG | - | Chr7:37186682-37186701 | None:intergenic | 50.0% | |
| GCGAGGAAGTTTCACTCCAA+TGG | + | Chr7:37186285-37186304 | MsG0780037965.01.T01:CDS | 50.0% | |
| GCGCAACCTTGAAATGGACA+GGG | + | Chr7:37185459-37185478 | MsG0780037965.01.T01:intron | 50.0% | |
| GGCGGCGACGATGAAAAATT+GGG | + | Chr7:37184831-37184850 | MsG0780037965.01.T01:CDS | 50.0% | |
| GGGACTTCCACTTGGAAAAG+AGG | - | Chr7:37186023-37186042 | None:intergenic | 50.0% | |
| TCGGTTTCTCTTGGTCACCA+AGG | + | Chr7:37185753-37185772 | MsG0780037965.01.T01:CDS | 50.0% | |
| TGGCGGCGACGATGAAAAAT+TGG | + | Chr7:37184830-37184849 | MsG0780037965.01.T01:CDS | 50.0% | |
| TTCAGCTTCAGGCCGATCAA+GGG | - | Chr7:37184520-37184539 | None:intergenic | 50.0% | |
| TTTCAGCTTCAGGCCGATCA+AGG | - | Chr7:37184521-37184540 | None:intergenic | 50.0% | |
| ! | CTTGTTGGTAGAGGAAGACG+AGG | + | Chr7:37186140-37186159 | MsG0780037965.01.T01:CDS | 50.0% |
| ! | GAAGGAGTATAAAGGAGGCC+AGG | + | Chr7:37184971-37184990 | MsG0780037965.01.T01:CDS | 50.0% |
| !! | GATCTTTTGGTGGTTTCGGG+AGG | + | Chr7:37186525-37186544 | MsG0780037965.01.T01:CDS | 50.0% |
| !! | GCACGATAGTGTCGGTTTCA+AGG | - | Chr7:37185501-37185520 | None:intergenic | 50.0% |
| !! | GTCAACGGTGATGGTAATGG+CGG | + | Chr7:37184813-37184832 | MsG0780037965.01.T01:CDS | 50.0% |
| AACCGCCTCTTGTGCGGAAA+CGG | + | Chr7:37184875-37184894 | MsG0780037965.01.T01:CDS | 55.0% | |
| CTCTTGTGCGGAAACGGAGA+AGG | + | Chr7:37184881-37184900 | MsG0780037965.01.T01:CDS | 55.0% | |
| CTGTGGGCGCAACCTTGAAA+TGG | + | Chr7:37185453-37185472 | MsG0780037965.01.T01:intron | 55.0% | |
| CTTCTCCGTTTCCGCACAAG+AGG | - | Chr7:37184883-37184902 | None:intergenic | 55.0% | |
| GGACCACCCTGTCCATTTCA+AGG | - | Chr7:37185468-37185487 | None:intergenic | 55.0% | |
| GGCGCAACCTTGAAATGGAC+AGG | + | Chr7:37185458-37185477 | MsG0780037965.01.T01:intron | 55.0% | |
| GGTGCATCGTGCCAAGTATG+AGG | + | Chr7:37185728-37185747 | MsG0780037965.01.T01:CDS | 55.0% | |
| TCCAAGTGGAAGTCCCGCAA+TGG | + | Chr7:37186027-37186046 | MsG0780037965.01.T01:CDS | 55.0% | |
| TCCATTGCGGGACTTCCACT+TGG | - | Chr7:37186031-37186050 | None:intergenic | 55.0% | |
| ! | GAGGGCACGAGATGTTCTGT+CGG | + | Chr7:37185013-37185032 | MsG0780037965.01.T01:CDS | 55.0% |
| CTCCGTTTCCGCACAAGAGG+CGG | - | Chr7:37184880-37184899 | None:intergenic | 60.0% | |
| GTGGAAGTCCCGCAATGGAC+TGG | + | Chr7:37186032-37186051 | MsG0780037965.01.T01:CDS | 60.0% | |
| GGTTGGCAGCGCCTCCAAGG+AGG | - | Chr7:37186665-37186684 | None:intergenic | 70.0% | |
| ! | GGGGGTTGGCAGCGCCTCCA+AGG | - | Chr7:37186668-37186687 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 37184501 | 37186827 | 37184501 | ID=MsG0780037965.01;Name=MsG0780037965.01 |
| Chr7 | mRNA | 37184501 | 37186827 | 37184501 | ID=MsG0780037965.01.T01;Parent=MsG0780037965.01;Name=MsG0780037965.01.T01;_AED=0.32;_eAED=0.32;_QI=0|1|1|1|0.5|0.42|7|226|485 |
| Chr7 | exon | 37185720 | 37186827 | 37185720 | ID=MsG0780037965.01.T01:exon:5741;Parent=MsG0780037965.01.T01 |
| Chr7 | exon | 37184501 | 37185076 | 37184501 | ID=MsG0780037965.01.T01:exon:5740;Parent=MsG0780037965.01.T01 |
| Chr7 | CDS | 37184501 | 37185076 | 37184501 | ID=MsG0780037965.01.T01:cds;Parent=MsG0780037965.01.T01 |
| Chr7 | CDS | 37185720 | 37186601 | 37185720 | ID=MsG0780037965.01.T01:cds;Parent=MsG0780037965.01.T01 |
| Chr7 | three_prime_UTR | 37186602 | 37186827 | 37186602 | ID=MsG0780037965.01.T01:three_prime_utr;Parent=MsG0780037965.01.T01 |
| Gene Sequence |
| Protein sequence |
