AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024495.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024495.01.T01 MTR_3g078560 89.097 321 20 1 210 530 225 530 0.0 578
MsG0580024495.01.T01 MTR_3g078560 75.472 106 11 1 82 187 6 96 3.93e-40 155
MsG0580024495.01.T01 MTR_5g012120 95.333 150 4 1 556 702 48 197 7.38e-95 292
MsG0580024495.01.T01 MTR_5g012120 95.333 150 4 1 556 702 125 274 1.30e-94 294
MsG0580024495.01.T01 MTR_3g024400 43.636 110 58 2 558 664 98 206 1.00e-18 86.3
MsG0580024495.01.T01 MTR_3g024400 43.636 110 58 2 558 664 146 254 3.09e-18 85.9
MsG0580024495.01.T01 MTR_6g053090 34.454 119 74 2 556 671 160 277 4.33e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024495.01.T01 AT1G04590 61.314 137 47 2 556 689 201 334 3.84e-48 174
MsG0580024495.01.T01 AT1G04590 60.000 140 47 2 556 689 201 337 1.10e-47 173
MsG0580024495.01.T01 AT4G18975 35.714 112 68 2 556 664 153 263 6.91e-14 73.2
MsG0580024495.01.T01 AT4G18975 35.714 112 68 2 556 664 153 263 6.91e-14 73.2
MsG0580024495.01.T01 AT4G18975 35.714 112 68 2 556 664 153 263 6.91e-14 73.2
MsG0580024495.01.T01 AT4G18975 35.714 112 68 2 556 664 126 236 8.96e-14 72.4
MsG0580024495.01.T01 AT4G21190 36.607 112 67 2 556 664 113 223 1.90e-13 72.4

Find 162 sgRNAs with CRISPR-Local

Find 537 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACTTCCTTCCACCTTTCT+TGG 0.166292 5:-5554043 None:intergenic
CTTCCAATTGGTGGTCTTAT+TGG 0.195132 5:+5547605 MsG0580024495.01.T01:CDS
GGTACTTTGAAGCCAATATT+TGG 0.196044 5:+5547527 MsG0580024495.01.T01:CDS
TTGGAGAAGCACACAAATTC+TGG 0.212798 5:+5552077 MsG0580024495.01.T01:CDS
AATTCCACTCCCATTGTAAT+TGG 0.226722 5:-5549143 None:intergenic
TTTCTCTGTGATCCAAATAT+TGG 0.253593 5:-5547539 None:intergenic
TCTTGTCCAAGGTAATTAAA+TGG 0.274212 5:+5551978 MsG0580024495.01.T01:intron
ATTGATGAAGGGGCTCTTAA+AGG 0.276726 5:+5548787 MsG0580024495.01.T01:CDS
TAGCCATTGGGTTATGAAAA+AGG 0.278948 5:+5548490 MsG0580024495.01.T01:CDS
AAATTCTGGGAAATGAAAAT+TGG 0.302899 5:+5552091 MsG0580024495.01.T01:CDS
ATATGCTTGAAGATCTTGTT+AGG 0.315068 5:+5552179 MsG0580024495.01.T01:CDS
ACCCTATGGTTGTAATTTAG+AGG 0.317657 5:+5548703 MsG0580024495.01.T01:CDS
GCTTTGATTGATGATGTATT+AGG 0.342586 5:+5549082 MsG0580024495.01.T01:CDS
AGTGGGTGAGAGAAATTAAA+AGG 0.344355 5:+5548630 MsG0580024495.01.T01:CDS
CTGATTTGCATTCTGTTCCT+TGG 0.362517 5:+5552116 MsG0580024495.01.T01:CDS
CACAAAACAATTCTAGTAAG+TGG 0.383769 5:+5548612 MsG0580024495.01.T01:CDS
TCCGGTGGAGGGTGCAGATC+GGG 0.383994 5:-5548003 None:intergenic
GGATCTGGTGTCTCCGGTGG+AGG 0.388484 5:-5548015 None:intergenic
TTCCTCCAGGATCCCATTGA+TGG 0.389913 5:-5549207 None:intergenic
TCATGATATCAGTATATTAT+CGG 0.392240 5:+5552152 MsG0580024495.01.T01:CDS
GATGACTCGATCACTTGAAA+TGG 0.396299 5:+5549171 MsG0580024495.01.T01:CDS
TTCAATTTAATGATAGCCAT+TGG 0.406196 5:+5548477 MsG0580024495.01.T01:CDS
CAAGGCTGAGATGAGAGAAT+TGG 0.414990 5:-5549450 None:intergenic
GCTTGTCCGGCTCCCATCAA+TGG 0.417857 5:+5549194 MsG0580024495.01.T01:CDS
ACTTATCAGCAATCAGATAT+AGG 0.420592 5:-5548892 None:intergenic
GGATGCTGAGCAAGGGGCAG+GGG 0.421808 5:+5551999 MsG0580024495.01.T01:CDS
AAGGGGCAGGGGACGACGAT+GGG 0.422241 5:+5552010 MsG0580024495.01.T01:CDS
ATTGTTCATGTTCAATTGCT+TGG 0.424611 5:+5549363 MsG0580024495.01.T01:CDS
TCACTTGAAATGGGCTTGTC+CGG 0.427405 5:+5549181 MsG0580024495.01.T01:CDS
AACAATAAACCTAGTGGGTC+AGG 0.427665 5:+5548589 MsG0580024495.01.T01:CDS
ATGGATGCTGAGCAAGGGGC+AGG 0.437905 5:+5551997 MsG0580024495.01.T01:CDS
ATCTCAATATTAAGAGTAGA+TGG 0.439608 5:-5549040 None:intergenic
TGGTGGTCTTATTGGAAGAA+TGG 0.441031 5:+5547613 MsG0580024495.01.T01:CDS
CTCCGGTGGAGGGTGCAGAT+CGG 0.447068 5:-5548004 None:intergenic
GAATTCCATCTCAAGGTCAT+TGG 0.449592 5:+5548864 MsG0580024495.01.T01:CDS
AGAGTCAAAGGAGGTTGGTA+AGG 0.450586 5:+5547780 MsG0580024495.01.T01:CDS
AGAAATTCATCCCAGACCTA+TGG 0.451387 5:+5547680 MsG0580024495.01.T01:CDS
CATAAAGATGCTATTGATGA+AGG 0.451520 5:+5548775 MsG0580024495.01.T01:CDS
TTGTTCATGTTCAATTGCTT+GGG 0.452439 5:+5549364 MsG0580024495.01.T01:CDS
TAATATTGAGATCTCTTCAA+TGG 0.453501 5:+5549051 MsG0580024495.01.T01:CDS
TTCCTTCCACCTTTCTTGGT+CGG 0.454987 5:-5554039 None:intergenic
GAGGAAGCACCGACCAAGAA+AGG 0.462577 5:+5554030 MsG0580024495.01.T01:CDS
TCACCGATGATTGTTTGAAA+AGG 0.462949 5:-5548739 None:intergenic
CTTGTCCGGCTCCCATCAAT+GGG 0.466260 5:+5549195 MsG0580024495.01.T01:CDS
TCAATTTAATGATAGCCATT+GGG 0.467132 5:+5548478 MsG0580024495.01.T01:CDS
GATTGTGATGAAGGCGGATC+TGG 0.467940 5:-5548030 None:intergenic
GAGTCCTTTCTAGATTCATC+GGG 0.468680 5:-5554090 None:intergenic
AGAGTCCTTTCTAGATTCAT+CGG 0.468952 5:-5554091 None:intergenic
ATTAGTCTCTCCAACATCAT+TGG 0.469361 5:-5547451 None:intergenic
ACTGATTCGAGCGTTAGATA+TGG 0.471532 5:+5552045 MsG0580024495.01.T01:CDS
GAGGAGAAGCTTCCAATTGG+TGG 0.471864 5:+5547596 MsG0580024495.01.T01:CDS
AACAGTGGAACAAATTGGTC+AGG 0.473072 5:+5548551 MsG0580024495.01.T01:CDS
CCACTCCCATTGTAATTGGT+TGG 0.475586 5:-5549139 None:intergenic
AGGAATAGAGTTACTAGGTT+CGG 0.476854 5:+5548454 MsG0580024495.01.T01:intron
TCAAGCATATCCCATAGGTC+TGG 0.477604 5:-5547691 None:intergenic
GATCTCTTCAATGGTGGTGA+TGG 0.480503 5:+5549060 MsG0580024495.01.T01:CDS
TCAGAGGAGAAGCTTCCAAT+TGG 0.482806 5:+5547593 MsG0580024495.01.T01:CDS
CAGAGAAAATGAAGGTCGAC+TGG 0.484451 5:+5547554 MsG0580024495.01.T01:CDS
GATCTGGTGTCTCCGGTGGA+GGG 0.489947 5:-5548014 None:intergenic
TGTTGCTACAGCACAAAGTA+AGG 0.499049 5:-5549326 None:intergenic
TCCCGATCTGCACCCTCCAC+CGG 0.499698 5:+5548002 MsG0580024495.01.T01:CDS
AACCTCTAAATTACAACCAT+AGG 0.500651 5:-5548705 None:intergenic
TGGAGAAGCACACAAATTCT+GGG 0.500787 5:+5552078 MsG0580024495.01.T01:CDS
GGCTCCCATCAATGGGATCC+TGG 0.502068 5:+5549202 MsG0580024495.01.T01:CDS
ATGACTCGATCACTTGAAAT+GGG 0.502090 5:+5549172 MsG0580024495.01.T01:CDS
GGTGGTTGATCCAGTTAAAA+CGG 0.504073 5:+5547506 MsG0580024495.01.T01:CDS
TGATGTGACCGCTCTGGTGG+TGG 0.504294 5:-5547844 None:intergenic
ATCTGCAGGTCACAATGAAT+CGG 0.510074 5:+5547909 MsG0580024495.01.T01:CDS
GAAATTCATCCCAGACCTAT+GGG 0.512152 5:+5547681 MsG0580024495.01.T01:CDS
CAAGCATATCCCATAGGTCT+GGG 0.514259 5:-5547690 None:intergenic
TAACTCCTTCACCTTTCACT+TGG 0.514287 5:-5548919 None:intergenic
TGGATGCTGAGCAAGGGGCA+GGG 0.515875 5:+5551998 MsG0580024495.01.T01:CDS
TGACTAGAGTCTAGCGACTC+TGG 0.516495 5:-5548060 None:intergenic
GAGGAACATGGAAGTGGAAA+GGG 0.518298 5:+5549006 MsG0580024495.01.T01:CDS
CAAGGGGCAGGGGACGACGA+TGG 0.518339 5:+5552009 MsG0580024495.01.T01:CDS
TTGATGATGTATTAGGCCCT+TGG 0.518754 5:+5549089 MsG0580024495.01.T01:CDS
ACCACCAGAGCGGTCACATC+AGG 0.519629 5:+5547846 MsG0580024495.01.T01:CDS
CTTCCAATAAGACCACCAAT+TGG 0.520898 5:-5547608 None:intergenic
ATGGAAAGGAAGATGCGTAT+TGG 0.521104 5:+5547485 MsG0580024495.01.T01:CDS
TCCTCCAGGATCCCATTGAT+GGG 0.523020 5:-5549206 None:intergenic
TTAGATATGGATCATAGAGT+TGG 0.524101 5:+5552058 MsG0580024495.01.T01:CDS
TGAAGAGAAAGATAGAGTAA+TGG 0.524227 5:+5553978 MsG0580024495.01.T01:CDS
GGTGGTGGTGATTGTGATGA+AGG 0.525242 5:-5548039 None:intergenic
AGGATCCCATTGATGGGAGC+CGG 0.526283 5:-5549200 None:intergenic
GCAAATGCATATGAGATGTT+AGG 0.526460 5:+5553949 MsG0580024495.01.T01:CDS
AGAGTGAGAGCCAATGATGT+TGG 0.530015 5:+5547441 None:intergenic
GGCGGATCTGGTGTCTCCGG+TGG 0.533349 5:-5548018 None:intergenic
CTAATGTATTTCACATGCCA+AGG 0.534486 5:-5549106 None:intergenic
AATAGCATCTTTATGACTGA+AGG 0.537538 5:-5548767 None:intergenic
GAGCAGGAGGAACATGGAAG+TGG 0.537916 5:+5549000 MsG0580024495.01.T01:CDS
AATTCCTGATGTGACCGCTC+TGG 0.537977 5:-5547850 None:intergenic
CACAAAGTAAGGCGACAACT+AGG 0.537985 5:-5549315 None:intergenic
TATGCTTGAAGATCTTGTTA+GGG 0.547355 5:+5552180 MsG0580024495.01.T01:CDS
TAAGGCGACAACTAGGACAA+TGG 0.548857 5:-5549308 None:intergenic
GGTTGCCAACCAATTACAAT+GGG 0.551517 5:+5549134 MsG0580024495.01.T01:CDS
ATAAAGATGCTATTGATGAA+GGG 0.553247 5:+5548776 MsG0580024495.01.T01:CDS
ACCTCTAAATTACAACCATA+GGG 0.553356 5:-5548704 None:intergenic
AGAGAGGTGAGAAGGAGAGA+AGG 0.556890 5:+5547974 MsG0580024495.01.T01:CDS
AATTAAATGGATGCTGAGCA+AGG 0.557804 5:+5551991 MsG0580024495.01.T01:CDS
TCCTGATGTGACCGCTCTGG+TGG 0.558384 5:-5547847 None:intergenic
TGGACAGGAATAGAGTTACT+AGG 0.560032 5:+5548449 MsG0580024495.01.T01:intron
ACATGGAAGATATTTGAAAG+AGG 0.563329 5:+5547649 MsG0580024495.01.T01:CDS
GAAGGCGGATCTGGTGTCTC+CGG 0.563779 5:-5548021 None:intergenic
AAATTGGTCAGGTTGTATGT+TGG 0.564858 5:+5548562 MsG0580024495.01.T01:CDS
ATAAAATATAGACAACCCTA+TGG 0.565726 5:+5548689 MsG0580024495.01.T01:CDS
CCAACCAATTACAATGGGAG+TGG 0.566319 5:+5549139 MsG0580024495.01.T01:CDS
CTGCTCCAATGACCTTGAGA+TGG 0.568289 5:-5548869 None:intergenic
GAAGCCCGATGAATCTAGAA+AGG 0.569279 5:+5554086 MsG0580024495.01.T01:CDS
TATGAAGAGTCAAAGGAGGT+TGG 0.572468 5:+5547775 MsG0580024495.01.T01:CDS
TCATCTCAGCCTTGAGGACA+CGG 0.572748 5:+5549459 MsG0580024495.01.T01:CDS
ACAAAACAATTCTAGTAAGT+GGG 0.572974 5:+5548613 MsG0580024495.01.T01:CDS
GATAAGTTTATCCAAGTGAA+AGG 0.573163 5:+5548908 MsG0580024495.01.T01:CDS
GAGTCTAGCGACTCTGGTGG+TGG 0.574267 5:-5548054 None:intergenic
TGAGACACAGAGAGGTGAGA+AGG 0.575455 5:+5547966 MsG0580024495.01.T01:CDS
AGAAAACTATGAAGAGTCAA+AGG 0.576460 5:+5547768 MsG0580024495.01.T01:CDS
CGGTTGCCAACCAATTACAA+TGG 0.577256 5:+5549133 MsG0580024495.01.T01:CDS
GGAGGAACATGGAAGTGGAA+AGG 0.579935 5:+5549005 MsG0580024495.01.T01:CDS
AAAACCGAGTCATTTCCTCC+AGG 0.582472 5:-5549220 None:intergenic
GTTGGTAAGGAGACAAACTC+TGG 0.583579 5:+5547793 MsG0580024495.01.T01:CDS
ATGTGAAATACATTAGTTGT+CGG 0.584951 5:+5549113 MsG0580024495.01.T01:CDS
TAAAGATGCTATTGATGAAG+GGG 0.586017 5:+5548777 MsG0580024495.01.T01:CDS
GATCTAACAATAAACCTAGT+GGG 0.587536 5:+5548584 MsG0580024495.01.T01:CDS
TTTATCCAAGTGAAAGGTGA+AGG 0.589354 5:+5548914 MsG0580024495.01.T01:CDS
ATTAAATGGATGCTGAGCAA+GGG 0.593427 5:+5551992 MsG0580024495.01.T01:CDS
TCTCATTCAGAACGTACTCA+TGG 0.597978 5:-5547741 None:intergenic
AGGACTCTGCGGACAAGTAG+CGG 0.600526 5:+5554106 MsG0580024495.01.T01:CDS
GAAAGGAAGATGCGTATTGG+TGG 0.601050 5:+5547488 MsG0580024495.01.T01:CDS
CAGACTCAAGCATATCCCAT+AGG 0.601186 5:-5547696 None:intergenic
GGATCGCTGCTTAGTTTGAG+CGG 0.601785 5:+5547814 MsG0580024495.01.T01:CDS
CAAACAGGAATTCCATCTCA+AGG 0.608066 5:+5548857 MsG0580024495.01.T01:CDS
ATGAGATGGCACAACTGCCA+AGG 0.609782 5:-5552133 None:intergenic
GCTTGAGTCTGCAGAAGGCG+AGG 0.610176 5:+5547708 MsG0580024495.01.T01:CDS
GGATCTAACAATAAACCTAG+TGG 0.611389 5:+5548583 MsG0580024495.01.T01:CDS
TGAATGATTAATTTATCCCG+AGG 0.615040 5:-5553919 None:intergenic
GAAGCACCGACCAAGAAAGG+TGG 0.615826 5:+5554033 MsG0580024495.01.T01:CDS
GGGACGACGATGGGAACATA+CGG 0.617286 5:+5552019 MsG0580024495.01.T01:CDS
AATATACTGATATCATGAGA+TGG 0.619629 5:-5552147 None:intergenic
TCATCTCTTCACTATCAAAG+AGG 0.621230 5:+5554011 MsG0580024495.01.T01:CDS
TATTGAGATCTCTTCAATGG+TGG 0.622031 5:+5549054 MsG0580024495.01.T01:CDS
GTTACTCTGTATGCTTTCAG+AGG 0.622323 5:+5547577 MsG0580024495.01.T01:CDS
TTAAATGGATGCTGAGCAAG+GGG 0.622969 5:+5551993 MsG0580024495.01.T01:CDS
GACACCATTCACAAAATGCA+TGG 0.623549 5:+5547879 MsG0580024495.01.T01:CDS
TTGGATCACAGAGAAAATGA+AGG 0.625554 5:+5547546 MsG0580024495.01.T01:CDS
AGAGAAAATGAAGGTCGACT+GGG 0.627295 5:+5547555 MsG0580024495.01.T01:CDS
CTTGCAAGCTACTTGTGTCA+AGG 0.629767 5:+5549390 MsG0580024495.01.T01:CDS
GGGTGAGAGAAATTAAAAGG+TGG 0.631323 5:+5548633 MsG0580024495.01.T01:CDS
ATTCTCTCATCTCAGCCTTG+AGG 0.635037 5:+5549453 MsG0580024495.01.T01:CDS
ATGGCAAGCAGAATGCGACA+TGG 0.639706 5:+5547632 MsG0580024495.01.T01:CDS
CACCGACCAAGAAAGGTGGA+AGG 0.641215 5:+5554037 MsG0580024495.01.T01:CDS
AGTTACTAAGTACAACAAAG+TGG 0.646566 5:+5548937 MsG0580024495.01.T01:CDS
TGCAGGTCACAATGAATCGG+TGG 0.648349 5:+5547912 MsG0580024495.01.T01:CDS
GGATCCTGGAGGAAATGACT+CGG 0.658510 5:+5549216 MsG0580024495.01.T01:CDS
TAATGTATTTCACATGCCAA+GGG 0.661889 5:-5549105 None:intergenic
GATATGCTTGAGTCTGCAGA+AGG 0.662881 5:+5547703 MsG0580024495.01.T01:CDS
AAACTATGAAGAGTCAAAGG+AGG 0.676783 5:+5547771 MsG0580024495.01.T01:CDS
CTAGAGTCTAGCGACTCTGG+TGG 0.701854 5:-5548057 None:intergenic
GGTGGTGATTGTGATGAAGG+CGG 0.710748 5:-5548036 None:intergenic
TCCCATCAATGGGATCCTGG+AGG 0.720925 5:+5549205 MsG0580024495.01.T01:CDS
ACAATGGGAGTGGAATTGTG+TGG 0.727183 5:+5549149 MsG0580024495.01.T01:CDS
TGAATCTAGAAAGGACTCTG+CGG 0.736241 5:+5554095 MsG0580024495.01.T01:CDS
GCATCGAACCACCACCAGAG+CGG 0.748454 5:+5547836 MsG0580024495.01.T01:CDS
GCAGCAACTGAGACACAGAG+AGG 0.762617 5:+5547958 MsG0580024495.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAATAAAATTTCAAATA+AGG + Chr5:5551659-5551678 MsG0580024495.01.T01:intron 10.0%
!!! TCATATTTTTATTAAAATCA+TGG - Chr5:5551031-5551050 None:intergenic 10.0%
!! AAAAGAAAATACCTATAAAT+TGG + Chr5:5551496-5551515 MsG0580024495.01.T01:intron 15.0%
!! AAATTTCAATTTCCATTATT+TGG - Chr5:5552215-5552234 None:intergenic 15.0%
!! AATTTCAATTTCCATTATTT+GGG - Chr5:5552214-5552233 None:intergenic 15.0%
!! AGATTATAGCATAATAATAA+GGG - Chr5:5549872-5549891 None:intergenic 15.0%
!! ATTAATAACACTATTAGAAT+GGG - Chr5:5552253-5552272 None:intergenic 15.0%
!! TAAATTAATCATTCAAAAAG+TGG + Chr5:5553927-5553946 MsG0580024495.01.T01:CDS 15.0%
!!! AAATAATGGAAATTGAAATT+TGG + Chr5:5552214-5552233 MsG0580024495.01.T01:intron 15.0%
!!! TCTATATTTTATGCTATTTT+TGG - Chr5:5548681-5548700 None:intergenic 15.0%
!!! TTTTTGAGAAAAAAAAAACT+AGG - Chr5:5550504-5550523 None:intergenic 15.0%
!! AAAAGTAAACTATCACATTT+GGG - Chr5:5551225-5551244 None:intergenic 20.0%
!! AAAGATAATAAAGTTAGTGA+AGG - Chr5:5550701-5550720 None:intergenic 20.0%
!! AAATACCATAGAATTATCAT+CGG + Chr5:5549895-5549914 MsG0580024495.01.T01:intron 20.0%
!! AATTCAAACAAAAGTTAAGT+AGG - Chr5:5550277-5550296 None:intergenic 20.0%
!! ACAAGATTAAATACTTAACT+CGG + Chr5:5553682-5553701 MsG0580024495.01.T01:intron 20.0%
!! ATACCAAACAAAAAATAACT+TGG - Chr5:5548412-5548431 None:intergenic 20.0%
!! ATATTCAATAATCTTTCCTT+TGG + Chr5:5550230-5550249 MsG0580024495.01.T01:intron 20.0%
!! ATGATAATTCTATGGTATTT+GGG - Chr5:5549895-5549914 None:intergenic 20.0%
!! ATTCAAACAAAAGTTAAGTA+GGG - Chr5:5550276-5550295 None:intergenic 20.0%
!! ATTCATATGAATTGAATACT+TGG - Chr5:5550368-5550387 None:intergenic 20.0%
!! GAGATTATAGCATAATAATA+AGG - Chr5:5549873-5549892 None:intergenic 20.0%
!! GATTAATAACACTATTAGAA+TGG - Chr5:5552254-5552273 None:intergenic 20.0%
!! TACAAAATTGATAAACTTTG+TGG - Chr5:5551771-5551790 None:intergenic 20.0%
!! TACCAAACAAAAAATAACTT+GGG - Chr5:5548411-5548430 None:intergenic 20.0%
!! TATTATAAATAAAGATGCAG+AGG + Chr5:5549725-5549744 MsG0580024495.01.T01:intron 20.0%
!! TCATGATATCAGTATATTAT+CGG + Chr5:5552152-5552171 MsG0580024495.01.T01:CDS 20.0%
!! TGATCTATTATTATTGATAC+AGG - Chr5:5549847-5549866 None:intergenic 20.0%
!! TTCTACTATACTAAATTGAT+TGG + Chr5:5552355-5552374 MsG0580024495.01.T01:intron 20.0%
!! TTTCATATACTTCTATTGAT+TGG + Chr5:5551726-5551745 MsG0580024495.01.T01:intron 20.0%
!!! AAGCTATTATTAGTTTCTTT+TGG + Chr5:5552332-5552351 MsG0580024495.01.T01:intron 20.0%
!!! AAGTTATTTTTTGTTTGGTA+TGG + Chr5:5548411-5548430 MsG0580024495.01.T01:intron 20.0%
!!! AGTTAAGGTTTAGAATTATA+TGG + Chr5:5553267-5553286 MsG0580024495.01.T01:intron 20.0%
!!! ATAGAAGTATATGAAAAGAA+AGG - Chr5:5551722-5551741 None:intergenic 20.0%
!!! ATTTTTCAATTAGATCAAAC+AGG + Chr5:5548842-5548861 MsG0580024495.01.T01:CDS 20.0%
!!! CAAAAAAGTATCTAATCATT+AGG - Chr5:5551802-5551821 None:intergenic 20.0%
!!! CTGTTTAGATTTTTTTTATG+GGG - Chr5:5551542-5551561 None:intergenic 20.0%
!!! GCTGTTTAGATTTTTTTTAT+GGG - Chr5:5551543-5551562 None:intergenic 20.0%
!!! GGTTCAATTTGATTTTTTTT+TGG - Chr5:5552913-5552932 None:intergenic 20.0%
!!! TAACTTTTGTTTGAATTGAT+TGG + Chr5:5550280-5550299 MsG0580024495.01.T01:intron 20.0%
!!! TCAATTTGATTTTTTTTTGG+TGG - Chr5:5552910-5552929 None:intergenic 20.0%
!!! TGATGAATTTTTGGTATTAA+TGG + Chr5:5553648-5553667 MsG0580024495.01.T01:intron 20.0%
!!! TGCTGTTTAGATTTTTTTTA+TGG - Chr5:5551544-5551563 None:intergenic 20.0%
!!! TGGTATATCTTTTAATCTAA+TGG + Chr5:5548379-5548398 MsG0580024495.01.T01:intron 20.0%
!!! TTCTAAAATAAAAGCTAATG+AGG - Chr5:5551109-5551128 None:intergenic 20.0%
!!! TTTTATTAAAATCATGGACT+TGG - Chr5:5551025-5551044 None:intergenic 20.0%
! AAATACCGATGATAATTCTA+TGG - Chr5:5549903-5549922 None:intergenic 25.0%
! AACTTAATACAATCACCTAA+AGG + Chr5:5550011-5550030 MsG0580024495.01.T01:intron 25.0%
! AATATACTGATATCATGAGA+TGG - Chr5:5552150-5552169 None:intergenic 25.0%
! AATCTTTCTATAACGATAGA+GGG - Chr5:5550636-5550655 None:intergenic 25.0%
! AATTGAATTGATGAAGATGA+TGG - Chr5:5550911-5550930 None:intergenic 25.0%
! ACAAAACAATTCTAGTAAGT+GGG + Chr5:5548613-5548632 MsG0580024495.01.T01:CDS 25.0%
! ATAAAATATAGACAACCCTA+TGG + Chr5:5548689-5548708 MsG0580024495.01.T01:CDS 25.0%
! ATAAAGATGCTATTGATGAA+GGG + Chr5:5548776-5548795 MsG0580024495.01.T01:CDS 25.0%
! ATATTTCTTGTAGGCAAATA+TGG - Chr5:5551304-5551323 None:intergenic 25.0%
! ATCTCAATATTAAGAGTAGA+TGG - Chr5:5549043-5549062 None:intergenic 25.0%
! ATGAAAGATGAACAATTTGA+AGG + Chr5:5551459-5551478 MsG0580024495.01.T01:intron 25.0%
! ATGTGAAATACATTAGTTGT+CGG + Chr5:5549113-5549132 MsG0580024495.01.T01:CDS 25.0%
! CAAGATTAAATACTTAACTC+GGG + Chr5:5553683-5553702 MsG0580024495.01.T01:intron 25.0%
! CATCAGAATAAATAGTACTA+AGG - Chr5:5551950-5551969 None:intergenic 25.0%
! CCAAAAAATGTTTCAAGATA+TGG - Chr5:5552491-5552510 None:intergenic 25.0%
! GAAAAGTAAACTATCACATT+TGG - Chr5:5551226-5551245 None:intergenic 25.0%
! GAAAATAAAACAAGCTAACT+TGG + Chr5:5553231-5553250 MsG0580024495.01.T01:intron 25.0%
! GATGATAATTCTATGGTATT+TGG - Chr5:5549896-5549915 None:intergenic 25.0%
! TAATATTGAGATCTCTTCAA+TGG + Chr5:5549051-5549070 MsG0580024495.01.T01:CDS 25.0%
! TCAATTTAATGATAGCCATT+GGG + Chr5:5548478-5548497 MsG0580024495.01.T01:CDS 25.0%
! TGTTATTGTACTTCTTCTAT+AGG + Chr5:5553764-5553783 MsG0580024495.01.T01:intron 25.0%
! TTAATCAAGACATGAAACAA+AGG - Chr5:5553863-5553882 None:intergenic 25.0%
! TTCAATTTAATGATAGCCAT+TGG + Chr5:5548477-5548496 MsG0580024495.01.T01:CDS 25.0%
! TTGATGAATATCTGTCATAA+TGG + Chr5:5550062-5550081 MsG0580024495.01.T01:intron 25.0%
!! AAACCTTTTCAAACAATCAT+CGG + Chr5:5548736-5548755 MsG0580024495.01.T01:CDS 25.0%
!! AAATTCTGGGAAATGAAAAT+TGG + Chr5:5552091-5552110 MsG0580024495.01.T01:CDS 25.0%
!! AATAGTGTTATTAATCGATG+TGG + Chr5:5552258-5552277 MsG0580024495.01.T01:intron 25.0%
!! ACCACAATGTTGATAAAAAA+AGG - Chr5:5551924-5551943 None:intergenic 25.0%
!! AGGAAAAGTTCTTTATTTGA+GGG - Chr5:5551347-5551366 None:intergenic 25.0%
!! ATACTAAATTGATTGGTTGA+TGG + Chr5:5552362-5552381 MsG0580024495.01.T01:intron 25.0%
!! ATTTTATAACTTATGCCCTT+AGG - Chr5:5549616-5549635 None:intergenic 25.0%
!! CTTCAAACATTATTTTCACT+GGG - Chr5:5551423-5551442 None:intergenic 25.0%
!! CTTGATTAAAAGCTTTTCAA+GGG + Chr5:5553874-5553893 MsG0580024495.01.T01:intron 25.0%
!! GTCATTTCAAATTTCTTTTG+AGG + Chr5:5553705-5553724 MsG0580024495.01.T01:intron 25.0%
!! TACTAAATTGATTGGTTGAT+GGG + Chr5:5552363-5552382 MsG0580024495.01.T01:intron 25.0%
!! TCTTGATTAAAAGCTTTTCA+AGG + Chr5:5553873-5553892 MsG0580024495.01.T01:intron 25.0%
!! TGGTGGATCTAAAATTTAAA+TGG - Chr5:5552762-5552781 None:intergenic 25.0%
!! TGTTTGAATTGATTGGTTAA+TGG + Chr5:5550287-5550306 MsG0580024495.01.T01:intron 25.0%
!!! AATTCCTATTTTTGATGGAA+AGG + Chr5:5547471-5547490 MsG0580024495.01.T01:CDS 25.0%
!!! ACCTTTTTTTATCAACATTG+TGG + Chr5:5551920-5551939 MsG0580024495.01.T01:intron 25.0%
!!! AGACTAATTCCTATTTTTGA+TGG + Chr5:5547466-5547485 MsG0580024495.01.T01:CDS 25.0%
!!! CCATATCTTGAAACATTTTT+TGG + Chr5:5552488-5552507 MsG0580024495.01.T01:intron 25.0%
!!! GCTTTTATTTTAGAAACGTT+TGG + Chr5:5551114-5551133 MsG0580024495.01.T01:intron 25.0%
!!! TATTTTTTGTTTGGTATGGA+AGG + Chr5:5548415-5548434 MsG0580024495.01.T01:intron 25.0%
!!! TTAATGGAGTTTTTTGTTGA+TGG + Chr5:5553139-5553158 MsG0580024495.01.T01:intron 25.0%
!!! TTTATGCTATTTTTGGAATC+TGG - Chr5:5548674-5548693 None:intergenic 25.0%
!!! TTTTTTATGGGGTTAATGTT+CGG - Chr5:5551531-5551550 None:intergenic 25.0%
!!! TTTTTTCCATTTCTGAGTAT+TGG - Chr5:5553192-5553211 None:intergenic 25.0%
AAACAAGCTAACTTGGAAAA+CGG + Chr5:5553238-5553257 MsG0580024495.01.T01:intron 30.0%
AAATAAAGATGCAGAGGAAA+AGG + Chr5:5549731-5549750 MsG0580024495.01.T01:intron 30.0%
AAATTTAAATGGCCATGATG+TGG - Chr5:5552751-5552770 None:intergenic 30.0%
AACCTCTAAATTACAACCAT+AGG - Chr5:5548708-5548727 None:intergenic 30.0%
AATAAAGATGCAGAGGAAAA+GGG + Chr5:5549732-5549751 MsG0580024495.01.T01:intron 30.0%
AATAGCATCTTTATGACTGA+AGG - Chr5:5548770-5548789 None:intergenic 30.0%
ACAAAAGTTAAGTAGGGAAA+TGG - Chr5:5550270-5550289 None:intergenic 30.0%
ACATGGAAGATATTTGAAAG+AGG + Chr5:5547649-5547668 MsG0580024495.01.T01:CDS 30.0%
ACCTCTAAATTACAACCATA+GGG - Chr5:5548707-5548726 None:intergenic 30.0%
ACTTATCAGCAATCAGATAT+AGG - Chr5:5548895-5548914 None:intergenic 30.0%
AGAAAAACAGTGGAACAAAT+TGG + Chr5:5548546-5548565 MsG0580024495.01.T01:CDS 30.0%
AGAAAACTATGAAGAGTCAA+AGG + Chr5:5547768-5547787 MsG0580024495.01.T01:CDS 30.0%
AGAAGTTTCATGTTAGATAC+TGG - Chr5:5549939-5549958 None:intergenic 30.0%
AGATAATTCTTGCAGGTAAA+TGG - Chr5:5550872-5550891 None:intergenic 30.0%
AGTTACTAAGTACAACAAAG+TGG + Chr5:5548937-5548956 MsG0580024495.01.T01:CDS 30.0%
ATACCAGTAACTATGTTTGA+AGG - Chr5:5553463-5553482 None:intergenic 30.0%
ATATGCTTGAAGATCTTGTT+AGG + Chr5:5552179-5552198 MsG0580024495.01.T01:CDS 30.0%
ATGCTTTAATATCTTGTCCA+AGG + Chr5:5551967-5551986 MsG0580024495.01.T01:intron 30.0%
ATGTGCTGAGTATTAATTGT+TGG - Chr5:5548191-5548210 None:intergenic 30.0%
ATTGTTCATGTTCAATTGCT+TGG + Chr5:5549363-5549382 MsG0580024495.01.T01:CDS 30.0%
CAAAAATCACAGTGAAAAAG+AGG + Chr5:5550518-5550537 MsG0580024495.01.T01:intron 30.0%
CAAGTGCTAAAAAGAAGAAA+GGG + Chr5:5554064-5554083 MsG0580024495.01.T01:CDS 30.0%
CAATCTTTCTATAACGATAG+AGG - Chr5:5550637-5550656 None:intergenic 30.0%
CACAAAACAATTCTAGTAAG+TGG + Chr5:5548612-5548631 MsG0580024495.01.T01:CDS 30.0%
CATAAAGATGCTATTGATGA+AGG + Chr5:5548775-5548794 MsG0580024495.01.T01:CDS 30.0%
CCAGTGAAAATAATGTTTGA+AGG + Chr5:5551421-5551440 MsG0580024495.01.T01:intron 30.0%
CTCTATCGTTATAGAAAGAT+TGG + Chr5:5550635-5550654 MsG0580024495.01.T01:intron 30.0%
CTTAACTCAAATTGTCAACA+TGG - Chr5:5551400-5551419 None:intergenic 30.0%
GAGAAAAATAAACCAGAGAT+TGG + Chr5:5550186-5550205 MsG0580024495.01.T01:intron 30.0%
GATAAGTTTATCCAAGTGAA+AGG + Chr5:5548908-5548927 MsG0580024495.01.T01:CDS 30.0%
GATCTAACAATAAACCTAGT+GGG + Chr5:5548584-5548603 MsG0580024495.01.T01:CDS 30.0%
GTCAACTGAAATTTCTTTCT+GGG - Chr5:5551902-5551921 None:intergenic 30.0%
TAAAGATGCTATTGATGAAG+GGG + Chr5:5548777-5548796 MsG0580024495.01.T01:CDS 30.0%
TAATGTATTTCACATGCCAA+GGG - Chr5:5549108-5549127 None:intergenic 30.0%
TACCAGTAACTATGTTTGAA+GGG - Chr5:5553462-5553481 None:intergenic 30.0%
TATGCTTGAAGATCTTGTTA+GGG + Chr5:5552180-5552199 MsG0580024495.01.T01:CDS 30.0%
TCAAAAACACGATAAGTCTA+TGG - Chr5:5549982-5550001 None:intergenic 30.0%
TCAAGTGCTAAAAAGAAGAA+AGG + Chr5:5554063-5554082 MsG0580024495.01.T01:CDS 30.0%
TCATGAATGAAAACAAGTGA+TGG + Chr5:5551059-5551078 MsG0580024495.01.T01:intron 30.0%
TCATTTAGTAGAATAAAGCC+TGG + Chr5:5552294-5552313 MsG0580024495.01.T01:intron 30.0%
TCTGCAATAGTTAATCATTG+TGG + Chr5:5550478-5550497 MsG0580024495.01.T01:intron 30.0%
TCTTCCTTTCCATCAAAAAT+AGG - Chr5:5547478-5547497 None:intergenic 30.0%
TCTTGTCCAAGGTAATTAAA+TGG + Chr5:5551978-5551997 MsG0580024495.01.T01:intron 30.0%
TGAAGAGAAAGATAGAGTAA+TGG + Chr5:5553978-5553997 MsG0580024495.01.T01:CDS 30.0%
TGAATGATTAATTTATCCCG+AGG - Chr5:5553922-5553941 None:intergenic 30.0%
TTAGAATTATATGGATGACG+TGG + Chr5:5553276-5553295 MsG0580024495.01.T01:intron 30.0%
TTAGATATGGATCATAGAGT+TGG + Chr5:5552058-5552077 MsG0580024495.01.T01:CDS 30.0%
TTGAATATGAACAATGTCAG+TGG + Chr5:5553602-5553621 MsG0580024495.01.T01:intron 30.0%
TTGTTCATGTTCAATTGCTT+GGG + Chr5:5549364-5549383 MsG0580024495.01.T01:CDS 30.0%
TTTCTCTGTGATCCAAATAT+TGG - Chr5:5547542-5547561 None:intergenic 30.0%
! ACAACAAATTTGAAGTTGAG+TGG - Chr5:5552665-5552684 None:intergenic 30.0%
! ATACCTATAAATTGGCTTAC+AGG + Chr5:5551504-5551523 MsG0580024495.01.T01:intron 30.0%
! CCTTCAAACATTATTTTCAC+TGG - Chr5:5551424-5551443 None:intergenic 30.0%
! GACAGTATTCATTGATTATG+TGG - Chr5:5553573-5553592 None:intergenic 30.0%
! GAGGAAAAGTTCTTTATTTG+AGG - Chr5:5551348-5551367 None:intergenic 30.0%
! GCACATTCAAACTATTTTCA+TGG - Chr5:5550165-5550184 None:intergenic 30.0%
! TAATTCTTTTTATGAGCAGG+AGG + Chr5:5548987-5549006 MsG0580024495.01.T01:CDS 30.0%
! TGAGGCATTTACAGATAAAA+AGG - Chr5:5550821-5550840 None:intergenic 30.0%
!! ACTTTGTTGATGGCTATATA+CGG + Chr5:5553811-5553830 MsG0580024495.01.T01:intron 30.0%
!! AGGCTTTATTCTACTAAATG+AGG - Chr5:5552295-5552314 None:intergenic 30.0%
!! ATCAAAGAGCCATTTTCTTT+CGG - Chr5:5551376-5551395 None:intergenic 30.0%
!! GCTTTGATTGATGATGTATT+AGG + Chr5:5549082-5549101 MsG0580024495.01.T01:CDS 30.0%
!! TATGGAAGGTATTAGAAATG+TGG + Chr5:5548429-5548448 MsG0580024495.01.T01:intron 30.0%
!! TTTTGGGGAATTCATTTATC+AGG + Chr5:5549267-5549286 MsG0580024495.01.T01:CDS 30.0%
!!! CTCACATTTACCTGTTTTTT+GGG + Chr5:5550423-5550442 MsG0580024495.01.T01:intron 30.0%
!!! GACCCAAGTTATTTTTTGTT+TGG + Chr5:5548406-5548425 MsG0580024495.01.T01:intron 30.0%
!!! TGTCAAGGTGAGTTTTATTT+GGG - Chr5:5551201-5551220 None:intergenic 30.0%
!!! TTTGTTGATGGTGTTTTAGT+GGG + Chr5:5553151-5553170 MsG0580024495.01.T01:intron 30.0%
!!! TTTTGTTGATGGTGTTTTAG+TGG + Chr5:5553150-5553169 MsG0580024495.01.T01:intron 30.0%
AAACTATGAAGAGTCAAAGG+AGG + Chr5:5547771-5547790 MsG0580024495.01.T01:CDS 35.0%
AAAGGGAAATACACTATCAG+TGG + Chr5:5553056-5553075 MsG0580024495.01.T01:intron 35.0%
AAAGGTTGTAGCAAAGATCA+TGG - Chr5:5550803-5550822 None:intergenic 35.0%
AACCAGAATGAGAAAAACAG+TGG + Chr5:5548536-5548555 MsG0580024495.01.T01:CDS 35.0%
AACGCTTTAACACACTCTAT+TGG - Chr5:5553322-5553341 None:intergenic 35.0%
AATACTTGGCTCATCAACAA+TGG - Chr5:5550354-5550373 None:intergenic 35.0%
AATTAAATGGATGCTGAGCA+AGG + Chr5:5551991-5552010 MsG0580024495.01.T01:CDS 35.0%
AATTCCACTCCCATTGTAAT+TGG - Chr5:5549146-5549165 None:intergenic 35.0%
ACCCTATGGTTGTAATTTAG+AGG + Chr5:5548703-5548722 MsG0580024495.01.T01:CDS 35.0%
ACTGTCCAAGATGAATTTGA+GGG - Chr5:5550979-5550998 None:intergenic 35.0%
AGAGTCCTTTCTAGATTCAT+CGG - Chr5:5554094-5554113 None:intergenic 35.0%
AGATGAAGGTTCTTCAAGAA+AGG - Chr5:5550612-5550631 None:intergenic 35.0%
AGCCATTGGGTTATGAAAAA+GGG + Chr5:5548491-5548510 MsG0580024495.01.T01:CDS 35.0%
AGGAATAGAGTTACTAGGTT+CGG + Chr5:5548454-5548473 MsG0580024495.01.T01:intron 35.0%
AGTGGGTGAGAGAAATTAAA+AGG + Chr5:5548630-5548649 MsG0580024495.01.T01:CDS 35.0%
ATGACTCGATCACTTGAAAT+GGG + Chr5:5549172-5549191 MsG0580024495.01.T01:CDS 35.0%
ATTAAATGGATGCTGAGCAA+GGG + Chr5:5551992-5552011 MsG0580024495.01.T01:CDS 35.0%
CAGCATCCATTTAATTACCT+TGG - Chr5:5551987-5552006 None:intergenic 35.0%
CAGTAACCAATACTCAGAAA+TGG + Chr5:5553183-5553202 MsG0580024495.01.T01:intron 35.0%
CTAAACAGCATCTGTGTATT+TGG + Chr5:5551554-5551573 MsG0580024495.01.T01:intron 35.0%
CTAATGTATTTCACATGCCA+AGG - Chr5:5549109-5549128 None:intergenic 35.0%
CTGTCAAAGATAATTCTTGC+AGG - Chr5:5550879-5550898 None:intergenic 35.0%
CTTGCAACAACATAATAACC+AGG - Chr5:5552315-5552334 None:intergenic 35.0%
GACAATGCATAACATATGCA+AGG + Chr5:5552863-5552882 MsG0580024495.01.T01:intron 35.0%
GAGGTTGAGATATTTCTTGT+AGG - Chr5:5551313-5551332 None:intergenic 35.0%
GATAACAGGGTCAATTGTTA+AGG + Chr5:5548355-5548374 MsG0580024495.01.T01:intron 35.0%
GATGAAGGTTCTTCAAGAAA+GGG - Chr5:5550611-5550630 None:intergenic 35.0%
GATTGAAAAGAGAGAACCAT+GGG - Chr5:5552801-5552820 None:intergenic 35.0%
GATTGCAGATGAAGAATTGT+TGG + Chr5:5551261-5551280 MsG0580024495.01.T01:intron 35.0%
GCAAATGCATATGAGATGTT+AGG + Chr5:5553949-5553968 MsG0580024495.01.T01:CDS 35.0%
GGAAAACGGTTATCAAGTTA+AGG + Chr5:5553252-5553271 MsG0580024495.01.T01:intron 35.0%
GGATCTAACAATAAACCTAG+TGG + Chr5:5548583-5548602 MsG0580024495.01.T01:CDS 35.0%
GGTCAACTGAAATTTCTTTC+TGG - Chr5:5551903-5551922 None:intergenic 35.0%
GTAAATCAAATGTGGGATCT+TGG - Chr5:5550844-5550863 None:intergenic 35.0%
GTAACATGGTTAGATCTGTT+AGG - Chr5:5550954-5550973 None:intergenic 35.0%
GTTAGATATAGGACTCCTAA+GGG + Chr5:5549598-5549617 MsG0580024495.01.T01:intron 35.0%
GTTATTTGTTCGTTGGCAAT+AGG + Chr5:5550568-5550587 MsG0580024495.01.T01:intron 35.0%
TAGCCATTGGGTTATGAAAA+AGG + Chr5:5548490-5548509 MsG0580024495.01.T01:CDS 35.0%
TATTGAGATCTCTTCAATGG+TGG + Chr5:5549054-5549073 MsG0580024495.01.T01:CDS 35.0%
TCAACAACAACCCAAAAAAC+AGG - Chr5:5550436-5550455 None:intergenic 35.0%
TCACATGTTAAGTCGATTGA+TGG - Chr5:5550117-5550136 None:intergenic 35.0%
TCACCGATGATTGTTTGAAA+AGG - Chr5:5548742-5548761 None:intergenic 35.0%
TCATCTCTTCACTATCAAAG+AGG + Chr5:5554011-5554030 MsG0580024495.01.T01:CDS 35.0%
TGATTGAAAAGAGAGAACCA+TGG - Chr5:5552802-5552821 None:intergenic 35.0%
TGCCTTTCAAGCAAAAACAA+GGG - Chr5:5550678-5550697 None:intergenic 35.0%
TGTTAGATATAGGACTCCTA+AGG + Chr5:5549597-5549616 MsG0580024495.01.T01:intron 35.0%
TTATGTTATCCTTCACCTTG+AGG + Chr5:5549547-5549566 MsG0580024495.01.T01:intron 35.0%
TTCTTCATCTGCAATCACAA+TGG - Chr5:5551257-5551276 None:intergenic 35.0%
TTGGATCACAGAGAAAATGA+AGG + Chr5:5547546-5547565 MsG0580024495.01.T01:CDS 35.0%
TTTATCCAAGTGAAAGGTGA+AGG + Chr5:5548914-5548933 MsG0580024495.01.T01:CDS 35.0%
TTTCAAGCAAAAACAAGGGA+AGG - Chr5:5550674-5550693 None:intergenic 35.0%
TTTGTGAGATAAAAGTCGGA+TGG - Chr5:5552994-5553013 None:intergenic 35.0%
! AAATTGGTCAGGTTGTATGT+TGG + Chr5:5548562-5548581 MsG0580024495.01.T01:CDS 35.0%
! AAGCTTTTGATCGTAAACCT+CGG + Chr5:5553902-5553921 MsG0580024495.01.T01:CDS 35.0%
! AAGGTATTAGAAATGTGGAC+AGG + Chr5:5548434-5548453 MsG0580024495.01.T01:intron 35.0%
! ACAGCACAATGAGAGTTTTT+GGG + Chr5:5549251-5549270 MsG0580024495.01.T01:CDS 35.0%
! GCGTAATTCTTTTTATGAGC+AGG + Chr5:5548984-5549003 MsG0580024495.01.T01:CDS 35.0%
! GGATTGGGTATTTTGTATGT+GGG + Chr5:5549758-5549777 MsG0580024495.01.T01:intron 35.0%
! GTGGTTTGTGAGATAAAAGT+CGG - Chr5:5552998-5553017 None:intergenic 35.0%
! TACAGCACAATGAGAGTTTT+TGG + Chr5:5549250-5549269 MsG0580024495.01.T01:CDS 35.0%
! TGAGACTTTGCAAACTTTTG+AGG + Chr5:5550769-5550788 MsG0580024495.01.T01:intron 35.0%
! TGTACCATGCATTTTGTGAA+TGG - Chr5:5547886-5547905 None:intergenic 35.0%
!! CTGTCTTGTTATTTGTTCGT+TGG + Chr5:5550561-5550580 MsG0580024495.01.T01:intron 35.0%
!! GGTACTTTGAAGCCAATATT+TGG + Chr5:5547527-5547546 MsG0580024495.01.T01:CDS 35.0%
!! TAAGAGGTGGTGTTTTGTTA+AGG - Chr5:5552704-5552723 None:intergenic 35.0%
!! TCAAAGAGCCATTTTCTTTC+GGG - Chr5:5551375-5551394 None:intergenic 35.0%
!! TTAAAAGCTTTTCAAGGGAC+TGG + Chr5:5553879-5553898 MsG0580024495.01.T01:intron 35.0%
!! TTCCACTGTTTTTCTCATTC+TGG - Chr5:5548541-5548560 None:intergenic 35.0%
!! TTTACAGTTCTAGAGCCTTT+AGG - Chr5:5550029-5550048 None:intergenic 35.0%
!!! ATTTTGTATGTGGGTTGGTT+TGG + Chr5:5549767-5549786 MsG0580024495.01.T01:intron 35.0%
!!! ATTTTTTTTTGGTGGTGTCC+GGG - Chr5:5552902-5552921 None:intergenic 35.0%
!!! CTGTCAAGGTGAGTTTTATT+TGG - Chr5:5551202-5551221 None:intergenic 35.0%
!!! CTTCAAAGTACCGTTTTAAC+TGG - Chr5:5547519-5547538 None:intergenic 35.0%
!!! GATTTTTTTTTGGTGGTGTC+CGG - Chr5:5552903-5552922 None:intergenic 35.0%
!!! GCTCACATTTACCTGTTTTT+TGG + Chr5:5550422-5550441 MsG0580024495.01.T01:intron 35.0%
!!! GTCAAGGTGAGTTTTATTTG+GGG - Chr5:5551200-5551219 None:intergenic 35.0%
!!! GTTTAGCGCTGATGAATTTT+TGG + Chr5:5553639-5553658 MsG0580024495.01.T01:intron 35.0%
!!! TTCCCTTGTTTTTGCTTGAA+AGG + Chr5:5550673-5550692 MsG0580024495.01.T01:intron 35.0%
!!! TTTTGTATGTGGGTTGGTTT+GGG + Chr5:5549768-5549787 MsG0580024495.01.T01:intron 35.0%
AAAGATTCACCTTGTCCTCA+AGG - Chr5:5549565-5549584 None:intergenic 40.0%
AACAGTGGAACAAATTGGTC+AGG + Chr5:5548551-5548570 MsG0580024495.01.T01:CDS 40.0%
AACGCTTTAACACACTCCAT+TGG + Chr5:5552436-5552455 MsG0580024495.01.T01:intron 40.0%
AAGAATTGCACATCTGCAAC+AGG + Chr5:5551601-5551620 MsG0580024495.01.T01:intron 40.0%
ACAGGAAAGTAACTGCAGAA+AGG - Chr5:5549829-5549848 None:intergenic 40.0%
ACAGGGTCAATTGTTAAGGT+TGG + Chr5:5548359-5548378 MsG0580024495.01.T01:intron 40.0%
ACGTTTGGATTCTCTCTCAA+TGG + Chr5:5551129-5551148 MsG0580024495.01.T01:intron 40.0%
AGAAATTCATCCCAGACCTA+TGG + Chr5:5547680-5547699 MsG0580024495.01.T01:CDS 40.0%
AGAGAAAATGAAGGTCGACT+GGG + Chr5:5547555-5547574 MsG0580024495.01.T01:CDS 40.0%
AGGACAAGGTGAATCTTTAG+GGG + Chr5:5549567-5549586 MsG0580024495.01.T01:intron 40.0%
ATCTGCAGGTCACAATGAAT+CGG + Chr5:5547909-5547928 MsG0580024495.01.T01:CDS 40.0%
ATGGAAAGGAAGATGCGTAT+TGG + Chr5:5547485-5547504 MsG0580024495.01.T01:CDS 40.0%
ATTAAGGTTGGATGAAGGGA+TGG - Chr5:5552626-5552645 None:intergenic 40.0%
ATTGATGAAGGGGCTCTTAA+AGG + Chr5:5548787-5548806 MsG0580024495.01.T01:CDS 40.0%
ATTGGACAGTTTGATGGAAG+AGG + Chr5:5550204-5550223 MsG0580024495.01.T01:intron 40.0%
CAAACAGGAATTCCATCTCA+AGG + Chr5:5548857-5548876 MsG0580024495.01.T01:CDS 40.0%
CAATTTCTCTCTGCAATGTG+AGG + Chr5:5550926-5550945 MsG0580024495.01.T01:intron 40.0%
CACTGTCCAAGATGAATTTG+AGG - Chr5:5550980-5550999 None:intergenic 40.0%
CAGTAACCTGAATAAGTGGT+AGG - Chr5:5552514-5552533 None:intergenic 40.0%
CCATCAACAAAGTGTAAGAG+AGG - Chr5:5553804-5553823 None:intergenic 40.0%
CCATTGGGTTATGAAAAAGG+GGG + Chr5:5548493-5548512 MsG0580024495.01.T01:CDS 40.0%
CCTCTCTTACACTTTGTTGA+TGG + Chr5:5553801-5553820 MsG0580024495.01.T01:intron 40.0%
CGAACCTAAATGACATTCTC+CGG - Chr5:5552967-5552986 None:intergenic 40.0%
CTTCCAATAAGACCACCAAT+TGG - Chr5:5547611-5547630 None:intergenic 40.0%
GAAATTCATCCCAGACCTAT+GGG + Chr5:5547681-5547700 MsG0580024495.01.T01:CDS 40.0%
GAATTCCATCTCAAGGTCAT+TGG + Chr5:5548864-5548883 MsG0580024495.01.T01:CDS 40.0%
GACACCATTCACAAAATGCA+TGG + Chr5:5547879-5547898 MsG0580024495.01.T01:CDS 40.0%
GAGGACAAGGTGAATCTTTA+GGG + Chr5:5549566-5549585 MsG0580024495.01.T01:intron 40.0%
GAGTCCTTTCTAGATTCATC+GGG - Chr5:5554093-5554112 None:intergenic 40.0%
GATAACATAAGTGTCCACCA+GGG - Chr5:5549537-5549556 None:intergenic 40.0%
GATGACTCGATCACTTGAAA+TGG + Chr5:5549171-5549190 MsG0580024495.01.T01:CDS 40.0%
GATGCAGTAACCTGAATAAG+TGG - Chr5:5552518-5552537 None:intergenic 40.0%
GCCATTGGGTTATGAAAAAG+GGG + Chr5:5548492-5548511 MsG0580024495.01.T01:CDS 40.0%
GGAAACAGCTAAACAGGTAT+TGG - Chr5:5551004-5551023 None:intergenic 40.0%
GGAAGCGGTAAATCAAATGT+GGG - Chr5:5550851-5550870 None:intergenic 40.0%
GGGTAAGCTTTCCCAAATAA+TGG + Chr5:5552200-5552219 MsG0580024495.01.T01:intron 40.0%
GGGTGAGAGAAATTAAAAGG+TGG + Chr5:5548633-5548652 MsG0580024495.01.T01:CDS 40.0%
GGTCCTGTAAGCCAATTTAT+AGG - Chr5:5551510-5551529 None:intergenic 40.0%
GGTGGTTGATCCAGTTAAAA+CGG + Chr5:5547506-5547525 MsG0580024495.01.T01:CDS 40.0%
GGTTGCCAACCAATTACAAT+GGG + Chr5:5549134-5549153 MsG0580024495.01.T01:CDS 40.0%
GTACAAGCAAAAAACACCCA+TGG + Chr5:5552782-5552801 MsG0580024495.01.T01:intron 40.0%
GTCCCTTCAAACATAGTTAC+TGG + Chr5:5553457-5553476 MsG0580024495.01.T01:intron 40.0%
GTGAGGTCAAAAGGATAACA+GGG + Chr5:5548342-5548361 MsG0580024495.01.T01:intron 40.0%
GTGCCTTTCAAGCAAAAACA+AGG - Chr5:5550679-5550698 None:intergenic 40.0%
GTTACTCTGTATGCTTTCAG+AGG + Chr5:5547577-5547596 MsG0580024495.01.T01:CDS 40.0%
GTTTCAAGATATGGATGACG+TGG - Chr5:5552482-5552501 None:intergenic 40.0%
TAACGATAGAGGGAAGATGA+AGG - Chr5:5550626-5550645 None:intergenic 40.0%
TAACTCCTTCACCTTTCACT+TGG - Chr5:5548922-5548941 None:intergenic 40.0%
TACTGCCCTCAAATTCATCT+TGG + Chr5:5550971-5550990 MsG0580024495.01.T01:intron 40.0%
TATCAATTGCTTCCCTATGC+TGG - Chr5:5552577-5552596 None:intergenic 40.0%
TATGAAGAGTCAAAGGAGGT+TGG + Chr5:5547775-5547794 MsG0580024495.01.T01:CDS 40.0%
TCACAAACCACCATACTTGA+CGG + Chr5:5553007-5553026 MsG0580024495.01.T01:intron 40.0%
TCTCATTCAGAACGTACTCA+TGG - Chr5:5547744-5547763 None:intergenic 40.0%
TCTTCAGATGCAACAAGAGA+CGG + Chr5:5548138-5548157 MsG0580024495.01.T01:intron 40.0%
TGAAGTTGAGTGGTTGTTGA+TGG - Chr5:5552655-5552674 None:intergenic 40.0%
TGAATCTAGAAAGGACTCTG+CGG + Chr5:5554095-5554114 MsG0580024495.01.T01:CDS 40.0%
TGAATTTGAGGGCAGTAACA+TGG - Chr5:5550968-5550987 None:intergenic 40.0%
TGAGGACAAGGTGAATCTTT+AGG + Chr5:5549565-5549584 MsG0580024495.01.T01:intron 40.0%
TGCATAACATATGCAAGGTC+CGG + Chr5:5552868-5552887 MsG0580024495.01.T01:intron 40.0%
TGCATGGTACAAAAATCTGC+AGG + Chr5:5547895-5547914 MsG0580024495.01.T01:CDS 40.0%
TGGAAGCGGTAAATCAAATG+TGG - Chr5:5550852-5550871 None:intergenic 40.0%
TGGACAGGAATAGAGTTACT+AGG + Chr5:5548449-5548468 MsG0580024495.01.T01:intron 40.0%
TGGACCAATTAGAGAAAGAG+TGG + Chr5:5553296-5553315 MsG0580024495.01.T01:intron 40.0%
TGTGAGGTCAAAAGGATAAC+AGG + Chr5:5548341-5548360 MsG0580024495.01.T01:intron 40.0%
TGTTGCTACAGCACAAAGTA+AGG - Chr5:5549329-5549348 None:intergenic 40.0%
TTAAATGGATGCTGAGCAAG+GGG + Chr5:5551993-5552012 MsG0580024495.01.T01:CDS 40.0%
TTCGTTGGCAATAGGAACAA+GGG + Chr5:5550576-5550595 MsG0580024495.01.T01:intron 40.0%
TTCTTGCAGGTAAATGGAAG+CGG - Chr5:5550866-5550885 None:intergenic 40.0%
TTGGCCACTCTTTCTCTAAT+TGG - Chr5:5553303-5553322 None:intergenic 40.0%
TTGGTCACACTCTCTCTAAT+TGG + Chr5:5552455-5552474 MsG0580024495.01.T01:intron 40.0%
TTTGGATTCTCTCTCAATGG+CGG + Chr5:5551132-5551151 MsG0580024495.01.T01:intron 40.0%
! AACAATAAACCTAGTGGGTC+AGG + Chr5:5548589-5548608 MsG0580024495.01.T01:CDS 40.0%
! AGCTTTTGATCGTAAACCTC+GGG + Chr5:5553903-5553922 MsG0580024495.01.T01:CDS 40.0%
! ATTAGAGAGAGTGTGACCAA+TGG - Chr5:5552455-5552474 None:intergenic 40.0%
! ATTTGGGGTCTCAAGCTTTA+TGG - Chr5:5551185-5551204 None:intergenic 40.0%
! CAGCACAATGAGAGTTTTTG+GGG + Chr5:5549252-5549271 MsG0580024495.01.T01:CDS 40.0%
! CGGAGAATGTCATTTAGGTT+CGG + Chr5:5552965-5552984 MsG0580024495.01.T01:intron 40.0%
! CTGATTTGCATTCTGTTCCT+TGG + Chr5:5552116-5552135 MsG0580024495.01.T01:CDS 40.0%
! GGAGAATGTCATTTAGGTTC+GGG + Chr5:5552966-5552985 MsG0580024495.01.T01:intron 40.0%
! GGGATTGGGTATTTTGTATG+TGG + Chr5:5549757-5549776 MsG0580024495.01.T01:intron 40.0%
! GTCGCTCTACTTCAAGTTAT+GGG + Chr5:5549510-5549529 MsG0580024495.01.T01:intron 40.0%
! GTGGATTAAGGTTGGATGAA+GGG - Chr5:5552630-5552649 None:intergenic 40.0%
! TGGAGAAGCACACAAATTCT+GGG + Chr5:5552078-5552097 MsG0580024495.01.T01:CDS 40.0%
! TGGGTATTTTGTATGTGGGT+TGG + Chr5:5549762-5549781 MsG0580024495.01.T01:intron 40.0%
! TGTCGCTCTACTTCAAGTTA+TGG + Chr5:5549509-5549528 MsG0580024495.01.T01:intron 40.0%
! TTGGAGAAGCACACAAATTC+TGG + Chr5:5552077-5552096 MsG0580024495.01.T01:CDS 40.0%
! TTTTATGAGCAGGAGGAACA+TGG + Chr5:5548994-5549013 MsG0580024495.01.T01:CDS 40.0%
! TTTTGGCCTACCACTTATTC+AGG + Chr5:5552505-5552524 MsG0580024495.01.T01:intron 40.0%
!! ACGGTTTATGGTGGATTAAG+AGG - Chr5:5552720-5552739 None:intergenic 40.0%
!! ACTGATTCGAGCGTTAGATA+TGG + Chr5:5552045-5552064 MsG0580024495.01.T01:CDS 40.0%
!! CTTCCAATTGGTGGTCTTAT+TGG + Chr5:5547605-5547624 MsG0580024495.01.T01:CDS 40.0%
!! GGGGGAGTATTGTTAGATAT+AGG + Chr5:5549587-5549606 MsG0580024495.01.T01:intron 40.0%
!! GTTTATGGTGGATTAAGAGG+TGG - Chr5:5552717-5552736 None:intergenic 40.0%
!! TGGTGGTCTTATTGGAAGAA+TGG + Chr5:5547613-5547632 MsG0580024495.01.T01:CDS 40.0%
!! TTGATGATGTATTAGGCCCT+TGG + Chr5:5549089-5549108 MsG0580024495.01.T01:CDS 40.0%
!! TTGTTGATGGAGGTGGATTA+AGG - Chr5:5552642-5552661 None:intergenic 40.0%
!!! GTGTTTTTTGCTTGTACTGG+TGG - Chr5:5552779-5552798 None:intergenic 40.0%
!!! TGGGTGTTTTTTGCTTGTAC+TGG - Chr5:5552782-5552801 None:intergenic 40.0%
AAAACCGAGTCATTTCCTCC+AGG - Chr5:5549223-5549242 None:intergenic 45.0%
AAAGATGCAGAGGAAAAGGG+TGG + Chr5:5549735-5549754 MsG0580024495.01.T01:intron 45.0%
AAGATGCAGAGGAAAAGGGT+GGG + Chr5:5549736-5549755 MsG0580024495.01.T01:intron 45.0%
ACAAGGGTCACACAACGAAA+GGG + Chr5:5553039-5553058 MsG0580024495.01.T01:intron 45.0%
ACAATGGGAGTGGAATTGTG+TGG + Chr5:5549149-5549168 MsG0580024495.01.T01:CDS 45.0%
AGCTTCATGCATGAGAGCAA+AGG - Chr5:5550733-5550752 None:intergenic 45.0%
ATGCAGAATCTGAAGGGTCA+TGG + Chr5:5553105-5553124 MsG0580024495.01.T01:intron 45.0%
ATTCTCTCATCTCAGCCTTG+AGG + Chr5:5549453-5549472 MsG0580024495.01.T01:CDS 45.0%
CAAGCATATCCCATAGGTCT+GGG - Chr5:5547693-5547712 None:intergenic 45.0%
CAAGGCTGAGATGAGAGAAT+TGG - Chr5:5549453-5549472 None:intergenic 45.0%
CACAAAGTAAGGCGACAACT+AGG - Chr5:5549318-5549337 None:intergenic 45.0%
CAGAAAGGTAACCAACCTCT+AGG - Chr5:5549814-5549833 None:intergenic 45.0%
CAGACTCAAGCATATCCCAT+AGG - Chr5:5547699-5547718 None:intergenic 45.0%
CAGAGAAAATGAAGGTCGAC+TGG + Chr5:5547554-5547573 MsG0580024495.01.T01:CDS 45.0%
CATAACATATGCAAGGTCCG+GGG + Chr5:5552870-5552889 MsG0580024495.01.T01:intron 45.0%
CCAACCAATTACAATGGGAG+TGG + Chr5:5549139-5549158 MsG0580024495.01.T01:CDS 45.0%
CCACTCCCATTGTAATTGGT+TGG - Chr5:5549142-5549161 None:intergenic 45.0%
CCAGAGATTGGACAGTTTGA+TGG + Chr5:5550198-5550217 MsG0580024495.01.T01:intron 45.0%
CCATCAAACTGTCCAATCTC+TGG - Chr5:5550201-5550220 None:intergenic 45.0%
CCATGATGTGGTTGAACAGA+CGG - Chr5:5552739-5552758 None:intergenic 45.0%
CCTCACATCCCGAAAGAAAA+TGG + Chr5:5551364-5551383 MsG0580024495.01.T01:intron 45.0%
CGGTTGCCAACCAATTACAA+TGG + Chr5:5549133-5549152 MsG0580024495.01.T01:CDS 45.0%
CTATCACATTTGGGCTGTCA+AGG - Chr5:5551216-5551235 None:intergenic 45.0%
CTTCTACCAAGACCAGCATA+GGG + Chr5:5552562-5552581 MsG0580024495.01.T01:intron 45.0%
CTTGCAAGCTACTTGTGTCA+AGG + Chr5:5549390-5549409 MsG0580024495.01.T01:CDS 45.0%
GAAAGGAAGATGCGTATTGG+TGG + Chr5:5547488-5547507 MsG0580024495.01.T01:CDS 45.0%
GAAGCCCGATGAATCTAGAA+AGG + Chr5:5554086-5554105 MsG0580024495.01.T01:CDS 45.0%
GAGGAACATGGAAGTGGAAA+GGG + Chr5:5549006-5549025 MsG0580024495.01.T01:CDS 45.0%
GATATGCTTGAGTCTGCAGA+AGG + Chr5:5547703-5547722 MsG0580024495.01.T01:CDS 45.0%
GCAACACACTTGCAACTGAA+CGG + Chr5:5548285-5548304 MsG0580024495.01.T01:intron 45.0%
GCATAACATATGCAAGGTCC+GGG + Chr5:5552869-5552888 MsG0580024495.01.T01:intron 45.0%
GCTTCATGCATGAGAGCAAA+GGG - Chr5:5550732-5550751 None:intergenic 45.0%
GGAAGGATTGTGAGGTCAAA+AGG + Chr5:5548333-5548352 MsG0580024495.01.T01:intron 45.0%
GGACAAGGTGAATCTTTAGG+GGG + Chr5:5549568-5549587 MsG0580024495.01.T01:intron 45.0%
GGACTTGGAAACAGCTAAAC+AGG - Chr5:5551010-5551029 None:intergenic 45.0%
GGAGAAGTTATGCAAGCCAA+AGG - Chr5:5550249-5550268 None:intergenic 45.0%
GGATAACATAAGTGTCCACC+AGG - Chr5:5549538-5549557 None:intergenic 45.0%
GGGAAATACACTATCAGTGG+TGG + Chr5:5553059-5553078 MsG0580024495.01.T01:intron 45.0%
GTGGTTGAACAGACGGTTTA+TGG - Chr5:5552732-5552751 None:intergenic 45.0%
GTTCGTTGGCAATAGGAACA+AGG + Chr5:5550575-5550594 MsG0580024495.01.T01:intron 45.0%
GTTGAACAGACGGTTTATGG+TGG - Chr5:5552729-5552748 None:intergenic 45.0%
GTTTCAACGTCGCTTCAGTT+GGG + Chr5:5548312-5548331 MsG0580024495.01.T01:intron 45.0%
TAAGGCGACAACTAGGACAA+TGG - Chr5:5549311-5549330 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCA+CGG - Chr5:5552841-5552860 None:intergenic 45.0%
TATCCTTCACCTTGAGGACA+AGG + Chr5:5549553-5549572 MsG0580024495.01.T01:intron 45.0%
TCAAATGTGGGATCTTGGTG+AGG - Chr5:5550839-5550858 None:intergenic 45.0%
TCAAGCATATCCCATAGGTC+TGG - Chr5:5547694-5547713 None:intergenic 45.0%
TCAGAGGAGAAGCTTCCAAT+TGG + Chr5:5547593-5547612 MsG0580024495.01.T01:CDS 45.0%
TCTTCTACCAAGACCAGCAT+AGG + Chr5:5552561-5552580 MsG0580024495.01.T01:intron 45.0%
TGACCCTTCAGATTCTGCAT+CGG - Chr5:5553105-5553124 None:intergenic 45.0%
TGACGTTTCTCCGTCAAGTA+TGG - Chr5:5553020-5553039 None:intergenic 45.0%
TGACTTCCTTCCACCTTTCT+TGG - Chr5:5554046-5554065 None:intergenic 45.0%
TGGCATCAACCAACTTGCAA+TGG + Chr5:5548241-5548260 MsG0580024495.01.T01:intron 45.0%
TTCAGTTGGGAAGGATTGTG+AGG + Chr5:5548325-5548344 MsG0580024495.01.T01:intron 45.0%
TTCCTTCCACCTTTCTTGGT+CGG - Chr5:5554042-5554061 None:intergenic 45.0%
TTGACGGAGAAACGTCACAA+GGG + Chr5:5553023-5553042 MsG0580024495.01.T01:intron 45.0%
TTGGGTTATGAAAAAGGGGG+TGG + Chr5:5548496-5548515 MsG0580024495.01.T01:CDS 45.0%
TTTCCCTTCCTCCTTGGATT+GGG - Chr5:5548165-5548184 None:intergenic 45.0%
TTTGAGGGCTAAACACAGTG+AGG - Chr5:5551332-5551351 None:intergenic 45.0%
! AACGCCGGAGAATGTCATTT+AGG + Chr5:5552960-5552979 MsG0580024495.01.T01:intron 45.0%
! AGTTGAGTGGTTGTTGATGG+AGG - Chr5:5552652-5552671 None:intergenic 45.0%
! CCATTTTCTTTCGGGATGTG+AGG - Chr5:5551367-5551386 None:intergenic 45.0%
! GACAAGGTGAATCTTTAGGG+GGG + Chr5:5549569-5549588 MsG0580024495.01.T01:intron 45.0%
! GATCTCTTCAATGGTGGTGA+TGG + Chr5:5549060-5549079 MsG0580024495.01.T01:CDS 45.0%
! GTTGGTAAGGAGACAAACTC+TGG + Chr5:5547793-5547812 MsG0580024495.01.T01:CDS 45.0%
! TACTTCAAGTTATGGGACCC+TGG + Chr5:5549517-5549536 MsG0580024495.01.T01:intron 45.0%
! TCACTTGAAATGGGCTTGTC+CGG + Chr5:5549181-5549200 MsG0580024495.01.T01:CDS 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG + Chr5:5552841-5552860 MsG0580024495.01.T01:intron 45.0%
!! AGAGTCAAAGGAGGTTGGTA+AGG + Chr5:5547780-5547799 MsG0580024495.01.T01:CDS 45.0%
!! ATTGCAAGTTGGTTGATGCC+AGG - Chr5:5548242-5548261 None:intergenic 45.0%
!! CCCCCTTTTTCATAACCCAA+TGG - Chr5:5548496-5548515 None:intergenic 45.0%
!! GGTGGATTAAGGTTGGATGA+AGG - Chr5:5552631-5552650 None:intergenic 45.0%
!! TGATGGAGGTGGATTAAGGT+TGG - Chr5:5552638-5552657 None:intergenic 45.0%
AACCTGCGACAGATCTCCAA+CGG + Chr5:5548082-5548101 MsG0580024495.01.T01:intron 50.0%
AATTCCTGATGTGACCGCTC+TGG - Chr5:5547853-5547872 None:intergenic 50.0%
ACCAACTGAGCTAAGCTCAC+GGG - Chr5:5552840-5552859 None:intergenic 50.0%
AGAGAGGTGAGAAGGAGAGA+AGG + Chr5:5547974-5547993 MsG0580024495.01.T01:CDS 50.0%
AGAGGAAAAGGGTGGGGATT+GGG + Chr5:5549743-5549762 MsG0580024495.01.T01:intron 50.0%
AGATGCAGAGGAAAAGGGTG+GGG + Chr5:5549737-5549756 MsG0580024495.01.T01:intron 50.0%
ATGAGATGGCACAACTGCCA+AGG - Chr5:5552136-5552155 None:intergenic 50.0%
ATGGCAAGCAGAATGCGACA+TGG + Chr5:5547632-5547651 MsG0580024495.01.T01:CDS 50.0%
ATGGTCCTGGTGGTTTGAAC+GGG - Chr5:5552607-5552626 None:intergenic 50.0%
CACAAGGGTCACACAACGAA+AGG + Chr5:5553038-5553057 MsG0580024495.01.T01:intron 50.0%
CAGAATCTGAAGGGTCATGG+TGG + Chr5:5553108-5553127 MsG0580024495.01.T01:intron 50.0%
CCGTCTGTTCAACCACATCA+TGG + Chr5:5552736-5552755 MsG0580024495.01.T01:intron 50.0%
CGTTTCAACGTCGCTTCAGT+TGG + Chr5:5548311-5548330 MsG0580024495.01.T01:intron 50.0%
CGTTTCTCCGTCAAGTATGG+TGG - Chr5:5553017-5553036 None:intergenic 50.0%
CTAGGCTCTCTAACTCCTAG+AGG + Chr5:5549796-5549815 MsG0580024495.01.T01:intron 50.0%
CTGCTCCAATGACCTTGAGA+TGG - Chr5:5548872-5548891 None:intergenic 50.0%
CTTGACGGAGAAACGTCACA+AGG + Chr5:5553022-5553041 MsG0580024495.01.T01:intron 50.0%
CTTTCCCTTCCTCCTTGGAT+TGG - Chr5:5548166-5548185 None:intergenic 50.0%
GAAAAACAGCCGTGTCCTCA+AGG - Chr5:5549471-5549490 None:intergenic 50.0%
GAGGAGAAGCTTCCAATTGG+TGG + Chr5:5547596-5547615 MsG0580024495.01.T01:CDS 50.0%
GATGGTCCTGGTGGTTTGAA+CGG - Chr5:5552608-5552627 None:intergenic 50.0%
GATTGTGATGAAGGCGGATC+TGG - Chr5:5548033-5548052 None:intergenic 50.0%
GCATCTGAAGACGACCAATC+CGG - Chr5:5548129-5548148 None:intergenic 50.0%
GCTCTCTAACTCCTAGAGGT+TGG + Chr5:5549800-5549819 MsG0580024495.01.T01:intron 50.0%
GGAGGAACATGGAAGTGGAA+AGG + Chr5:5549005-5549024 MsG0580024495.01.T01:CDS 50.0%
GGATCCTGGAGGAAATGACT+CGG + Chr5:5549216-5549235 MsG0580024495.01.T01:CDS 50.0%
GGTGGTGATTGTGATGAAGG+CGG - Chr5:5548039-5548058 None:intergenic 50.0%
TCACCTTGTCCTCAAGGTGA+AGG - Chr5:5549559-5549578 None:intergenic 50.0%
TCATCTCAGCCTTGAGGACA+CGG + Chr5:5549459-5549478 MsG0580024495.01.T01:CDS 50.0%
TCCTCCAGGATCCCATTGAT+GGG - Chr5:5549209-5549228 None:intergenic 50.0%
TGACTAGAGTCTAGCGACTC+TGG - Chr5:5548063-5548082 None:intergenic 50.0%
TGAGACACAGAGAGGTGAGA+AGG + Chr5:5547966-5547985 MsG0580024495.01.T01:CDS 50.0%
TGCAGGTCACAATGAATCGG+TGG + Chr5:5547912-5547931 MsG0580024495.01.T01:CDS 50.0%
TTCCCTTCCTCCTTGGATTG+GGG - Chr5:5548164-5548183 None:intergenic 50.0%
TTCCTCCAGGATCCCATTGA+TGG - Chr5:5549210-5549229 None:intergenic 50.0%
! ATCTGAAGGGTCATGGTGGA+CGG + Chr5:5553112-5553131 MsG0580024495.01.T01:intron 50.0%
! ATGACATTCTCCGGCGTTGA+CGG - Chr5:5552958-5552977 None:intergenic 50.0%
! GCACCGATGCAGAATCTGAA+GGG + Chr5:5553099-5553118 MsG0580024495.01.T01:intron 50.0%
! GGATCGCTGCTTAGTTTGAG+CGG + Chr5:5547814-5547833 MsG0580024495.01.T01:CDS 50.0%
! GGTGGTGGTGATTGTGATGA+AGG - Chr5:5548042-5548061 None:intergenic 50.0%
! TGAGTGGTTGTTGATGGAGG+TGG - Chr5:5552649-5552668 None:intergenic 50.0%
! TGCACCGATGCAGAATCTGA+AGG + Chr5:5553098-5553117 MsG0580024495.01.T01:intron 50.0%
! TGTTTTGTGCCTGACCCACT+AGG - Chr5:5548601-5548620 None:intergenic 50.0%
! TTCAAGTTATGGGACCCTGG+TGG + Chr5:5549520-5549539 MsG0580024495.01.T01:intron 50.0%
! TTGCTTCCCTATGCTGGTCT+TGG - Chr5:5552571-5552590 None:intergenic 50.0%
!! CATGGTGGACGGTGGTTTAA+TGG + Chr5:5553123-5553142 MsG0580024495.01.T01:intron 50.0%
!!! GGACACGGCTGTTTTTCTAG+TGG + Chr5:5549474-5549493 MsG0580024495.01.T01:CDS 50.0%
ACATACCACCGCCGCTGAAA+TGG + Chr5:5548207-5548226 MsG0580024495.01.T01:intron 55.0%
AGACGACCAATCCGGTGGTT+TGG - Chr5:5548121-5548140 None:intergenic 55.0%
AGGATCCCATTGATGGGAGC+CGG - Chr5:5549203-5549222 None:intergenic 55.0%
CAACGTCGCTTCAGTTGGGA+AGG + Chr5:5548316-5548335 MsG0580024495.01.T01:intron 55.0%
CACCGACCAAGAAAGGTGGA+AGG + Chr5:5554037-5554056 MsG0580024495.01.T01:CDS 55.0%
CAGAGGAAAAGGGTGGGGAT+TGG + Chr5:5549742-5549761 MsG0580024495.01.T01:intron 55.0%
CCAACTGAGCTAAGCTCACG+GGG - Chr5:5552839-5552858 None:intergenic 55.0%
CTAGAGTCTAGCGACTCTGG+TGG - Chr5:5548060-5548079 None:intergenic 55.0%
CTTGTCCGGCTCCCATCAAT+GGG + Chr5:5549195-5549214 MsG0580024495.01.T01:CDS 55.0%
GACGACCAATCCGGTGGTTT+GGG - Chr5:5548120-5548139 None:intergenic 55.0%
GAGCAGGAGGAACATGGAAG+TGG + Chr5:5549000-5549019 MsG0580024495.01.T01:CDS 55.0%
GCAGCAACTGAGACACAGAG+AGG + Chr5:5547958-5547977 MsG0580024495.01.T01:CDS 55.0%
GCGGTCGAACCATTGCAAGT+TGG - Chr5:5548253-5548272 None:intergenic 55.0%
GGGACGACGATGGGAACATA+CGG + Chr5:5552019-5552038 MsG0580024495.01.T01:CDS 55.0%
GTTGGATGAAGGGATGGTCC+TGG - Chr5:5552620-5552639 None:intergenic 55.0%
TCAGTGGTGGCAGACACAAG+TGG + Chr5:5553072-5553091 MsG0580024495.01.T01:intron 55.0%
TCCCATCAATGGGATCCTGG+AGG + Chr5:5549205-5549224 MsG0580024495.01.T01:CDS 55.0%
TCTGAAGACGACCAATCCGG+TGG - Chr5:5548126-5548145 None:intergenic 55.0%
TGGCTCTTTCCCTTCCTCCT+TGG - Chr5:5548171-5548190 None:intergenic 55.0%
TGGTCCTGGTGGTTTGAACG+GGG - Chr5:5552606-5552625 None:intergenic 55.0%
TTGACGGCGTGCATGTAAGG+CGG - Chr5:5552942-5552961 None:intergenic 55.0%
! GCAAGTGTGTTGCTCGTCGT+CGG - Chr5:5548278-5548297 None:intergenic 55.0%
!! GAAGCACCGACCAAGAAAGG+TGG + Chr5:5554033-5554052 MsG0580024495.01.T01:CDS 55.0%
!! GAGGAAGCACCGACCAAGAA+AGG + Chr5:5554030-5554049 MsG0580024495.01.T01:CDS 55.0%
!! GCAAGTTGGTTGATGCCAGG+CGG - Chr5:5548239-5548258 None:intergenic 55.0%
!! GGGTTGGTTTGGGAGAGACT+AGG + Chr5:5549778-5549797 MsG0580024495.01.T01:intron 55.0%
ACCACCAGAGCGGTCACATC+AGG + Chr5:5547846-5547865 MsG0580024495.01.T01:CDS 60.0%
AGAACCGCCACCCAAACCAC+CGG + Chr5:5548107-5548126 MsG0580024495.01.T01:intron 60.0%
ATGGATGCTGAGCAAGGGGC+AGG + Chr5:5551997-5552016 MsG0580024495.01.T01:CDS 60.0%
CAAGAGACGGCCCCAATCCA+AGG + Chr5:5548151-5548170 MsG0580024495.01.T01:intron 60.0%
CAAGGTCCGGGGTTCAAACC+CGG + Chr5:5552881-5552900 MsG0580024495.01.T01:intron 60.0%
CCCCGTGAGCTTAGCTCAGT+TGG + Chr5:5552836-5552855 MsG0580024495.01.T01:intron 60.0%
CTCCGTTGGAGATCTGTCGC+AGG - Chr5:5548087-5548106 None:intergenic 60.0%
CTGAGCTAAGCTCACGGGGA+CGG - Chr5:5552835-5552854 None:intergenic 60.0%
GAAGGCGGATCTGGTGTCTC+CGG - Chr5:5548024-5548043 None:intergenic 60.0%
GAGTCTAGCGACTCTGGTGG+TGG - Chr5:5548057-5548076 None:intergenic 60.0%
GATCTGGTGTCTCCGGTGGA+GGG - Chr5:5548017-5548036 None:intergenic 60.0%
GCATCGAACCACCACCAGAG+CGG + Chr5:5547836-5547855 MsG0580024495.01.T01:CDS 60.0%
GCTTGAGTCTGCAGAAGGCG+AGG + Chr5:5547708-5547727 MsG0580024495.01.T01:CDS 60.0%
GCTTGTCCGGCTCCCATCAA+TGG + Chr5:5549194-5549213 MsG0580024495.01.T01:CDS 60.0%
GGATGAAGGGATGGTCCTGG+TGG - Chr5:5552617-5552636 None:intergenic 60.0%
GGCCCCAATCCAAGGAGGAA+GGG + Chr5:5548159-5548178 MsG0580024495.01.T01:intron 60.0%
GGCTCCCATCAATGGGATCC+TGG + Chr5:5549202-5549221 MsG0580024495.01.T01:CDS 60.0%
GGTCCTGGTGGTTTGAACGG+GGG - Chr5:5552605-5552624 None:intergenic 60.0%
GTGGTGGCAGACACAAGTGG+TGG + Chr5:5553075-5553094 MsG0580024495.01.T01:intron 60.0%
TACATGCACGCCGTCAACGC+CGG + Chr5:5552945-5552964 MsG0580024495.01.T01:intron 60.0%
TCCTGATGTGACCGCTCTGG+TGG - Chr5:5547850-5547869 None:intergenic 60.0%
TCTCCCCCGTTCAAACCACC+AGG + Chr5:5552599-5552618 MsG0580024495.01.T01:intron 60.0%
TGATGTGACCGCTCTGGTGG+TGG - Chr5:5547847-5547866 None:intergenic 60.0%
TGGATGCTGAGCAAGGGGCA+GGG + Chr5:5551998-5552017 MsG0580024495.01.T01:CDS 60.0%
TGGTGTCCGGGTTTGAACCC+CGG - Chr5:5552890-5552909 None:intergenic 60.0%
! CAATCCGGTGGTTTGGGTGG+CGG - Chr5:5548114-5548133 None:intergenic 60.0%
! GACCAATCCGGTGGTTTGGG+TGG - Chr5:5548117-5548136 None:intergenic 60.0%
! GCGTTGACGGCGTGCATGTA+AGG - Chr5:5552945-5552964 None:intergenic 60.0%
! GTGTTGCTCGTCGTCGGTAG+CGG - Chr5:5548272-5548291 None:intergenic 60.0%
! TGGTTGATGCCAGGCGGTTC+CGG - Chr5:5548233-5548252 None:intergenic 60.0%
!! TGAAGGGTCATGGTGGACGG+TGG + Chr5:5553115-5553134 MsG0580024495.01.T01:intron 60.0%
AAGGGGCAGGGGACGACGAT+GGG + Chr5:5552010-5552029 MsG0580024495.01.T01:CDS 65.0%
ACCACCGCCGCTGAAATGGC+CGG + Chr5:5548211-5548230 MsG0580024495.01.T01:intron 65.0%
AGCTAAGCTCACGGGGACGG+TGG - Chr5:5552832-5552851 None:intergenic 65.0%
CGCCACCCAAACCACCGGAT+TGG + Chr5:5548112-5548131 MsG0580024495.01.T01:intron 65.0%
CGGCCCCAATCCAAGGAGGA+AGG + Chr5:5548158-5548177 MsG0580024495.01.T01:intron 65.0%
CTGAAATGGCCGGAACCGCC+TGG + Chr5:5548221-5548240 MsG0580024495.01.T01:intron 65.0%
GAGACGGCCCCAATCCAAGG+AGG + Chr5:5548154-5548173 MsG0580024495.01.T01:intron 65.0%
GGATCTGGTGTCTCCGGTGG+AGG - Chr5:5548018-5548037 None:intergenic 65.0%
GGATGCTGAGCAAGGGGCAG+GGG + Chr5:5551999-5552018 MsG0580024495.01.T01:CDS 65.0%
GGCGGTTCCGGCCATTTCAG+CGG - Chr5:5548221-5548240 None:intergenic 65.0%
GGTTCCGGCCATTTCAGCGG+CGG - Chr5:5548218-5548237 None:intergenic 65.0%
GTGCATGTAAGGCGGCGTGG+TGG - Chr5:5552934-5552953 None:intergenic 65.0%
TCCCGATCTGCACCCTCCAC+CGG + Chr5:5548002-5548021 MsG0580024495.01.T01:CDS 65.0%
! CTCCGGTGGAGGGTGCAGAT+CGG - Chr5:5548007-5548026 None:intergenic 65.0%
! TCCGGTGGAGGGTGCAGATC+GGG - Chr5:5548006-5548025 None:intergenic 65.0%
! TGGGTGGCGGTTCTCTCCGT+TGG - Chr5:5548101-5548120 None:intergenic 65.0%
CAAGGGGCAGGGGACGACGA+TGG + Chr5:5552009-5552028 MsG0580024495.01.T01:CDS 70.0%
GGCGGATCTGGTGTCTCCGG+TGG - Chr5:5548021-5548040 None:intergenic 70.0%
GGCGTGCATGTAAGGCGGCG+TGG - Chr5:5552937-5552956 None:intergenic 70.0%
TCCGGCCATTTCAGCGGCGG+TGG - Chr5:5548215-5548234 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 5547454 5554125 5547454 ID=MsG0580024495.01;Name=MsG0580024495.01
Chr5 mRNA 5547454 5554125 5547454 ID=MsG0580024495.01.T01;Parent=MsG0580024495.01;Name=MsG0580024495.01.T01;_AED=0.40;_eAED=0.87;_QI=0|0|0.25|1|0.66|0.75|4|0|702
Chr5 exon 5547454 5548078 5547454 ID=MsG0580024495.01.T01:exon:19092;Parent=MsG0580024495.01.T01
Chr5 exon 5548456 5549495 5548456 ID=MsG0580024495.01.T01:exon:19093;Parent=MsG0580024495.01.T01
Chr5 exon 5551989 5552201 5551989 ID=MsG0580024495.01.T01:exon:19094;Parent=MsG0580024495.01.T01
Chr5 exon 5553895 5554125 5553895 ID=MsG0580024495.01.T01:exon:19095;Parent=MsG0580024495.01.T01
Chr5 CDS 5547454 5548078 5547454 ID=MsG0580024495.01.T01:cds;Parent=MsG0580024495.01.T01
Chr5 CDS 5548456 5549495 5548456 ID=MsG0580024495.01.T01:cds;Parent=MsG0580024495.01.T01
Chr5 CDS 5551989 5552201 5551989 ID=MsG0580024495.01.T01:cds;Parent=MsG0580024495.01.T01
Chr5 CDS 5553895 5554125 5553895 ID=MsG0580024495.01.T01:cds;Parent=MsG0580024495.01.T01
Gene Sequence

>MsG0580024495.01.T01

ATGATGTTGGAGAGACTAATTCCTATTTTTGATGGAAAGGAAGATGCGTATTGGTGGTTGATCCAGTTAAAACGGTACTTTGAAGCCAATATTTGGATCACAGAGAAAATGAAGGTCGACTGGGTTACTCTGTATGCTTTCAGAGGAGAAGCTTCCAATTGGTGGTCTTATTGGAAGAATGGCAAGCAGAATGCGACATGGAAGATATTTGAAAGAGGTTTTATTCAGAAATTCATCCCAGACCTATGGGATATGCTTGAGTCTGCAGAAGGCGAGGAGCAAGAAAGCCATGAGTACGTTCTGAATGAGAACACAGAAAACTATGAAGAGTCAAAGGAGGTTGGTAAGGAGACAAACTCTGGATCGCTGCTTAGTTTGAGCGGCATCGAACCACCACCAGAGCGGTCACATCAGGAATTTCATGTGACACCATTCACAAAATGCATGGTACAAAAATCTGCAGGTCACAATGAATCGGTGGTAGTGTTTGAGACAATCATCAATGCAGCAACTGAGACACAGAGAGGTGAGAAGGAGAGAAGGATTGTTCCCGATCTGCACCCTCCACCGGAGACACCAGATCCGCCTTCATCACAATCACCACCACCAGAGTCGCTAGACTCTAGAATAGAGTTACTAGGTTCGGTTCAATTTAATGATAGCCATTGGGTTATGAAAAAGGGGGTGGCTATAGTAGATGATACAAACCAGAATGAGAAAAACAGTGGAACAAATTGGTCAGGTTGTATGTTGGATCTAACAATAAACCTAGTGGGTCAGGCACAAAACAATTCTAGTAAGTGGGTGAGAGAAATTAAAAGGTGGAGCAATGTAGAGTCACCAGATTCCAAAAATAGCATAAAATATAGACAACCCTATGGTTGTAATTTAGAGGTTTTTGCATCAAACCTTTTCAAACAATCATCGGTGATTCATCCTTCAGTCATAAAGATGCTATTGATGAAGGGGCTCTTAAAGGATAACATACGTACAAATATTCTGAAGCACACTATTTTTCAATTAGATCAAACAGGAATTCCATCTCAAGGTCATTGGAGCAGCCTATATCTGATTGCTGATAAGTTTATCCAAGTGAAAGGTGAAGGAGTTACTAAGTACAACAAAGTGGTTTTATCTATATTGTTGAAGACACGCGTAATTCTTTTTATGAGCAGGAGGAACATGGAAGTGGAAAGGGAATTGTCACTGCCATCTACTCTTAATATTGAGATCTCTTCAATGGTGGTGATGGCTTTGATTGATGATGTATTAGGCCCTTGGCATGTGAAATACATTAGTTGTCGGTTGCCAACCAATTACAATGGGAGTGGAATTGTGTGGATGACTCGATCACTTGAAATGGGCTTGTCCGGCTCCCATCAATGGGATCCTGGAGGAAATGACTCGGTTTTCGAACACTACAGCACAATGAGAGTTTTTGGGGAATTCATTTATCAGGAAATTCAATGTCTCATCGCCATTGTCCTAGTTGTCGCCTTACTTTGTGCTGTAGCAACAGTTGTCTTGCTGAAATTGTTCATGTTCAATTGCTTGGGTGACTTGCAAGCTACTTGTGTCAAGGCTACTCTAGTAGTTAGCAATGACAAAATGTACTCAAACCAATTCTCTCATCTCAGCCTTGAGGACACGGCTGTTTTTCTAGTGGTAATTAAATGGATGCTGAGCAAGGGGCAGGGGACGACGATGGGAACATACGGTCAACTGATTCGAGCGTTAGATATGGATCATAGAGTTGGAGAAGCACACAAATTCTGGGAAATGAAAATTGGCACTGATTTGCATTCTGTTCCTTGGCAGTTGTGCCATCTCATGATATCAGTATATTATCGGAACAATATGCTTGAAGATCTTGTTAGGGGACTGGAAGCTTTTGATCGTAAACCTCGGGATAAATTAATCATTCAAAAAGTGGCAAATGCATATGAGATGTTAGGCTTGATTGAAGAGAAAGATAGAGTAATGGAAAAATATAGTCATCTCTTCACTATCAAAGAGGAAGCACCGACCAAGAAAGGTGGAAGGAAGTCAAGTGCTAAAAAGAAGAAAGGGAAGCCCGATGAATCTAGAAAGGACTCTGCGGACAAGTAG

Protein sequence

>MsG0580024495.01.T01

MMLERLIPIFDGKEDAYWWLIQLKRYFEANIWITEKMKVDWVTLYAFRGEASNWWSYWKNGKQNATWKIFERGFIQKFIPDLWDMLESAEGEEQESHEYVLNENTENYEESKEVGKETNSGSLLSLSGIEPPPERSHQEFHVTPFTKCMVQKSAGHNESVVVFETIINAATETQRGEKERRIVPDLHPPPETPDPPSSQSPPPESLDSRIELLGSVQFNDSHWVMKKGVAIVDDTNQNEKNSGTNWSGCMLDLTINLVGQAQNNSSKWVREIKRWSNVESPDSKNSIKYRQPYGCNLEVFASNLFKQSSVIHPSVIKMLLMKGLLKDNIRTNILKHTIFQLDQTGIPSQGHWSSLYLIADKFIQVKGEGVTKYNKVVLSILLKTRVILFMSRRNMEVERELSLPSTLNIEISSMVVMALIDDVLGPWHVKYISCRLPTNYNGSGIVWMTRSLEMGLSGSHQWDPGGNDSVFEHYSTMRVFGEFIYQEIQCLIAIVLVVALLCAVATVVLLKLFMFNCLGDLQATCVKATLVVSNDKMYSNQFSHLSLEDTAVFLVVIKWMLSKGQGTTMGTYGQLIRALDMDHRVGEAHKFWEMKIGTDLHSVPWQLCHLMISVYYRNNMLEDLVRGLEAFDRKPRDKLIIQKVANAYEMLGLIEEKDRVMEKYSHLFTIKEEAPTKKGGRKSSAKKKKGKPDESRKDSADK*