Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015402.01.T01 | XP_003600817.2 | 74.654 | 217 | 11 | 2 | 1 | 173 | 1 | 217 | 1.62E-106 | 313 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015402.01.T01 | G7JAK4 | 74.654 | 217 | 11 | 2 | 1 | 173 | 1 | 217 | 7.72e-107 | 313 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048738.01 | MsG0380015402.01 | 0.829166 | 5.992098e-55 | 6.084267e-52 |
| MsG0080048797.01 | MsG0380015402.01 | 0.852376 | 4.807331e-61 | 1.002526e-57 |
| MsG0080048922.01 | MsG0380015402.01 | 0.802605 | 5.183005e-49 | 2.549670e-46 |
| MsG0080049008.01 | MsG0380015402.01 | 0.802549 | 5.321359e-49 | 2.614032e-46 |
| MsG0180000096.01 | MsG0380015402.01 | 0.871133 | 8.621057e-67 | 3.438769e-63 |
| MsG0180000466.01 | MsG0380015402.01 | 0.807392 | 5.169810e-50 | 2.876135e-47 |
| MsG0180000698.01 | MsG0380015402.01 | 0.821534 | 3.836203e-53 | 3.129305e-50 |
| MsG0180001147.01 | MsG0380015402.01 | -0.825933 | 3.577525e-54 | 3.307368e-51 |
| MsG0180001169.01 | MsG0380015402.01 | 0.860563 | 1.892949e-63 | 5.196844e-60 |
| MsG0180001293.01 | MsG0380015402.01 | 0.801131 | 1.040651e-48 | 4.931644e-46 |
| MsG0180001588.01 | MsG0380015402.01 | 0.887937 | 9.193196e-73 | 6.976533e-69 |
| MsG0180001719.01 | MsG0380015402.01 | 0.838456 | 2.844825e-57 | 3.812629e-54 |
| MsG0180003238.01 | MsG0380015402.01 | 0.806111 | 9.640939e-50 | 5.189375e-47 |
| MsG0180003421.01 | MsG0380015402.01 | 0.838198 | 3.315163e-57 | 4.407723e-54 |
| MsG0180003430.01 | MsG0380015402.01 | 0.801429 | 9.043420e-49 | 4.317737e-46 |
| MsG0180003857.01 | MsG0380015402.01 | 0.818658 | 1.747745e-52 | 1.316127e-49 |
| MsG0180003905.01 | MsG0380015402.01 | 0.914901 | 1.111636e-84 | 2.829171e-80 |
| MsG0180004064.01 | MsG0380015402.01 | 0.862565 | 4.632400e-64 | 1.362602e-60 |
| MsG0180004120.01 | MsG0380015402.01 | 0.895608 | 8.152288e-76 | 8.523106e-72 |
| MsG0180004125.01 | MsG0380015402.01 | -0.802820 | 4.678252e-49 | 2.314206e-46 |
| MsG0180004467.01 | MsG0380015402.01 | 0.817910 | 2.580852e-52 | 1.903940e-49 |
| MsG0180004471.01 | MsG0380015402.01 | 0.830235 | 3.292075e-55 | 3.448347e-52 |
| MsG0180004538.01 | MsG0380015402.01 | 0.813729 | 2.208925e-51 | 1.453979e-48 |
| MsG0180004583.01 | MsG0380015402.01 | 0.823748 | 1.171974e-53 | 1.018137e-50 |
| MsG0180004652.01 | MsG0380015402.01 | 0.853405 | 2.442395e-61 | 5.271686e-58 |
| MsG0180004828.01 | MsG0380015402.01 | 0.846573 | 1.994915e-59 | 3.448621e-56 |
| MsG0180005048.01 | MsG0380015402.01 | 0.817289 | 3.562686e-52 | 2.583885e-49 |
| MsG0180005655.01 | MsG0380015402.01 | 0.830659 | 2.593537e-55 | 2.750242e-52 |
| MsG0180005780.01 | MsG0380015402.01 | 0.850132 | 2.069199e-60 | 4.012512e-57 |
| MsG0180005819.01 | MsG0380015402.01 | 0.862587 | 4.558470e-64 | 1.341930e-60 |
| MsG0180005839.01 | MsG0380015402.01 | -0.801077 | 1.067582e-48 | 5.052376e-46 |
| MsG0180006116.01 | MsG0380015402.01 | 0.828994 | 6.597510e-55 | 6.664194e-52 |
| MsG0180006133.01 | MsG0380015402.01 | 0.818981 | 1.475962e-52 | 1.121663e-49 |
| MsG0180006183.01 | MsG0380015402.01 | 0.861345 | 1.095011e-63 | 3.088941e-60 |
| MsG0280006301.01 | MsG0380015402.01 | 0.811890 | 5.584182e-51 | 3.497989e-48 |
| MsG0280010617.01 | MsG0380015402.01 | 0.842878 | 1.976079e-58 | 3.037385e-55 |
| MsG0280010825.01 | MsG0380015402.01 | 0.819207 | 1.310899e-52 | 1.002313e-49 |
| MsG0280010994.01 | MsG0380015402.01 | -0.806252 | 9.003395e-50 | 4.863857e-47 |
| MsG0380012367.01 | MsG0380015402.01 | 0.839541 | 1.490198e-57 | 2.064211e-54 |
| MsG0380012818.01 | MsG0380015402.01 | 0.877564 | 5.680123e-69 | 2.868703e-65 |
| MsG0380014542.01 | MsG0380015402.01 | 0.840652 | 7.642162e-58 | 1.095786e-54 |
| MsG0380014544.01 | MsG0380015402.01 | 0.857744 | 1.324496e-62 | 3.302741e-59 |
| MsG0380014666.01 | MsG0380015402.01 | 0.842320 | 2.779532e-58 | 4.198892e-55 |
| MsG0380015340.01 | MsG0380015402.01 | 0.834285 | 3.274418e-56 | 3.868224e-53 |
| MsG0380015402.01 | MsG0380015656.01 | 0.843093 | 1.732305e-58 | 2.680687e-55 |
| MsG0380015402.01 | MsG0380015828.01 | -0.836186 | 1.084485e-56 | 1.356587e-53 |
| MsG0380015402.01 | MsG0380015857.01 | 0.841049 | 6.012836e-58 | 8.728043e-55 |
| MsG0380015402.01 | MsG0380016031.01 | 0.869717 | 2.511093e-66 | 9.517096e-63 |
| MsG0380015402.01 | MsG0380016096.01 | -0.801791 | 7.621850e-49 | 3.672522e-46 |
| MsG0380015402.01 | MsG0380016250.01 | 0.847798 | 9.203575e-60 | 1.654742e-56 |
| MsG0380015402.01 | MsG0380016760.01 | 0.867693 | 1.133915e-65 | 3.994561e-62 |
| MsG0380015402.01 | MsG0380016819.01 | 0.872172 | 3.900032e-67 | 1.615770e-63 |
| MsG0380015402.01 | MsG0380017079.01 | 0.834609 | 2.715603e-56 | 3.239180e-53 |
| MsG0380015402.01 | MsG0380017128.01 | 0.854941 | 8.799815e-62 | 1.998228e-58 |
| MsG0380015402.01 | MsG0380017181.01 | 0.806057 | 9.896114e-50 | 5.319533e-47 |
| MsG0380015402.01 | MsG0380017332.01 | 0.844852 | 5.846521e-59 | 9.562710e-56 |
| MsG0380015402.01 | MsG0380017380.01 | 0.824553 | 7.582025e-54 | 6.738678e-51 |
| MsG0380015402.01 | MsG0380017416.01 | 0.835553 | 1.569336e-56 | 1.925602e-53 |
| MsG0380015402.01 | MsG0380017483.01 | 0.801357 | 9.353951e-49 | 4.458062e-46 |
| MsG0380015402.01 | MsG0380017588.01 | 0.895900 | 6.173235e-76 | 6.524977e-72 |
| MsG0380015402.01 | MsG0380017696.01 | 0.879165 | 1.556316e-69 | 8.351105e-66 |
| MsG0380015402.01 | MsG0380017700.01 | 0.813859 | 2.067758e-51 | 1.365798e-48 |
| MsG0380015402.01 | MsG0380017826.01 | 0.838464 | 2.831505e-57 | 3.795601e-54 |
| MsG0380015402.01 | MsG0380017932.01 | 0.820639 | 6.167898e-53 | 4.907122e-50 |
| MsG0380015402.01 | MsG0380018035.01 | -0.824775 | 6.723951e-54 | 6.014482e-51 |
| MsG0380015402.01 | MsG0480018228.01 | 0.872858 | 2.301804e-67 | 9.780125e-64 |
| MsG0380015402.01 | MsG0480018362.01 | 0.832820 | 7.598337e-56 | 8.589865e-53 |
| MsG0380015402.01 | MsG0480018486.01 | 0.828397 | 9.198209e-55 | 9.132152e-52 |
| MsG0380015402.01 | MsG0480018767.01 | 0.844038 | 9.679816e-59 | 1.543431e-55 |
| MsG0380015402.01 | MsG0480019601.01 | 0.800872 | 1.175276e-48 | 5.533204e-46 |
| MsG0380015402.01 | MsG0480020398.01 | 0.885182 | 1.013329e-71 | 6.886477e-68 |
| MsG0380015402.01 | MsG0480020937.01 | 0.851693 | 7.514852e-61 | 1.533521e-57 |
| MsG0380015402.01 | MsG0480021100.01 | 0.837640 | 4.612553e-57 | 6.029795e-54 |
| MsG0380015402.01 | MsG0480021151.01 | -0.803675 | 3.113433e-49 | 1.574056e-46 |
| MsG0380015402.01 | MsG0480021175.01 | 0.831734 | 1.411463e-55 | 1.545370e-52 |
| MsG0380015402.01 | MsG0480021224.01 | 0.814698 | 1.349251e-51 | 9.117138e-49 |
| MsG0380015402.01 | MsG0480021301.01 | 0.839865 | 1.227228e-57 | 1.717118e-54 |
| MsG0380015402.01 | MsG0480021456.01 | 0.805825 | 1.107403e-49 | 5.917400e-47 |
| MsG0380015402.01 | MsG0480021486.01 | 0.848447 | 6.093944e-60 | 1.118722e-56 |
| MsG0380015402.01 | MsG0480021704.01 | 0.823890 | 1.085519e-53 | 9.467352e-51 |
| MsG0380015402.01 | MsG0480021740.01 | 0.871770 | 5.304836e-67 | 2.165795e-63 |
| MsG0380015402.01 | MsG0480021773.01 | 0.863260 | 2.827004e-64 | 8.517743e-61 |
| MsG0380015402.01 | MsG0480021902.01 | 0.836497 | 9.039625e-57 | 1.141154e-53 |
| MsG0380015402.01 | MsG0480022006.01 | 0.838954 | 2.115889e-57 | 2.878779e-54 |
| MsG0380015402.01 | MsG0480022302.01 | 0.837224 | 5.895658e-57 | 7.607709e-54 |
| MsG0380015402.01 | MsG0480022307.01 | 0.843869 | 1.074777e-58 | 1.704576e-55 |
| MsG0380015402.01 | MsG0480022320.01 | 0.822832 | 1.918166e-53 | 1.623687e-50 |
| MsG0380015402.01 | MsG0480022378.01 | 0.814327 | 1.630299e-51 | 1.090637e-48 |
| MsG0380015402.01 | MsG0480023125.01 | 0.830468 | 2.888301e-55 | 3.045462e-52 |
| MsG0380015402.01 | MsG0480023375.01 | -0.829356 | 5.390295e-55 | 5.504225e-52 |
| MsG0380015402.01 | MsG0480023386.01 | -0.832530 | 8.969638e-56 | 1.005283e-52 |
| MsG0380015402.01 | MsG0480023414.01 | 0.846360 | 2.280660e-59 | 3.915548e-56 |
| MsG0380015402.01 | MsG0480023424.01 | 0.819100 | 1.386888e-52 | 1.057295e-49 |
| MsG0380015402.01 | MsG0480023426.01 | 0.856419 | 3.258458e-62 | 7.773085e-59 |
| MsG0380015402.01 | MsG0480023575.01 | 0.834883 | 2.315880e-56 | 2.785078e-53 |
| MsG0380015402.01 | MsG0480023626.01 | 0.886833 | 2.424156e-72 | 1.759133e-68 |
| MsG0380015402.01 | MsG0480023663.01 | 0.842888 | 1.963698e-58 | 3.019371e-55 |
| MsG0380015402.01 | MsG0480023706.01 | 0.874167 | 8.345410e-68 | 3.718606e-64 |
| MsG0380015402.01 | MsG0480023774.01 | 0.841750 | 3.931083e-58 | 5.832286e-55 |
| MsG0380015402.01 | MsG0480023842.01 | 0.843103 | 1.721619e-58 | 2.665043e-55 |
| MsG0380015402.01 | MsG0480023913.01 | 0.853421 | 2.416379e-61 | 5.218350e-58 |
| MsG0380015402.01 | MsG0480023996.01 | 0.807661 | 4.532560e-50 | 2.539180e-47 |
| MsG0380015402.01 | MsG0480024002.01 | 0.843225 | 1.597218e-58 | 2.482079e-55 |
| MsG0380015402.01 | MsG0480024019.01 | 0.869542 | 2.863042e-66 | 1.078587e-62 |
| MsG0380015402.01 | MsG0580024158.01 | 0.831668 | 1.464996e-55 | 1.600703e-52 |
| MsG0380015402.01 | MsG0580024276.01 | 0.873467 | 1.438153e-67 | 6.248617e-64 |
| MsG0380015402.01 | MsG0580024481.01 | 0.807907 | 4.018686e-50 | 2.265715e-47 |
| MsG0380015402.01 | MsG0580025038.01 | 0.809881 | 1.519781e-50 | 9.028325e-48 |
| MsG0380015402.01 | MsG0580025504.01 | 0.857018 | 2.171206e-62 | 5.283081e-59 |
| MsG0380015402.01 | MsG0580025633.01 | 0.824163 | 9.367422e-54 | 8.232539e-51 |
| MsG0380015402.01 | MsG0580026029.01 | 0.866530 | 2.666238e-65 | 9.015666e-62 |
| MsG0380015402.01 | MsG0580026343.01 | 0.880475 | 5.322757e-70 | 3.004023e-66 |
| MsG0380015402.01 | MsG0580026446.01 | 0.851079 | 1.121217e-60 | 2.242881e-57 |
| MsG0380015402.01 | MsG0580027135.01 | 0.825063 | 5.748978e-54 | 5.184580e-51 |
| MsG0380015402.01 | MsG0580027854.01 | 0.822491 | 2.302603e-53 | 1.930218e-50 |
| MsG0380015402.01 | MsG0580028364.01 | 0.812840 | 3.462863e-51 | 2.225006e-48 |
| MsG0380015402.01 | MsG0580028927.01 | 0.840900 | 6.581128e-58 | 9.509767e-55 |
| MsG0380015402.01 | MsG0580028955.01 | 0.857164 | 1.967173e-62 | 4.810830e-59 |
| MsG0380015402.01 | MsG0580029218.01 | 0.832835 | 7.532758e-56 | 8.519582e-53 |
| MsG0380015402.01 | MsG0580029696.01 | 0.824809 | 6.600945e-54 | 5.910147e-51 |
| MsG0380015402.01 | MsG0580030141.01 | 0.848242 | 6.945945e-60 | 1.266568e-56 |
| MsG0380015402.01 | MsG0580030179.01 | 0.805161 | 1.525873e-49 | 8.015353e-47 |
| MsG0380015402.01 | MsG0680031006.01 | 0.852709 | 3.863844e-61 | 8.144221e-58 |
| MsG0380015402.01 | MsG0680031356.01 | 0.883839 | 3.193441e-71 | 2.057673e-67 |
| MsG0380015402.01 | MsG0680033645.01 | 0.811673 | 6.223436e-51 | 3.876000e-48 |
| MsG0380015402.01 | MsG0680035776.01 | 0.840314 | 9.366574e-58 | 1.328984e-54 |
| MsG0380015402.01 | MsG0680035792.01 | 0.834858 | 2.349814e-56 | 2.823873e-53 |
| MsG0380015402.01 | MsG0680035905.01 | 0.862647 | 4.369520e-64 | 1.288908e-60 |
| MsG0380015402.01 | MsG0780036015.01 | 0.826712 | 2.333655e-54 | 2.205617e-51 |
| MsG0380015402.01 | MsG0780036553.01 | 0.831907 | 1.279383e-55 | 1.407950e-52 |
| MsG0380015402.01 | MsG0780038393.01 | 0.832125 | 1.130171e-55 | 1.251491e-52 |
| MsG0380015402.01 | MsG0780038647.01 | 0.835509 | 1.609691e-56 | 1.972579e-53 |
| MsG0380015402.01 | MsG0780038736.01 | 0.821294 | 4.358578e-53 | 3.531707e-50 |
| MsG0380015402.01 | MsG0780039536.01 | 0.857099 | 2.055901e-62 | 5.016449e-59 |
| MsG0380015402.01 | MsG0780040276.01 | 0.803532 | 3.333700e-49 | 1.679369e-46 |
| MsG0380015402.01 | MsG0780040367.01 | 0.807006 | 6.240237e-50 | 3.436879e-47 |
| MsG0380015402.01 | MsG0780040460.01 | 0.852528 | 4.351570e-61 | 9.118591e-58 |
| MsG0380015402.01 | MsG0780040554.01 | 0.841440 | 4.744554e-58 | 6.972514e-55 |
| MsG0380015402.01 | MsG0780040594.01 | 0.831544 | 1.572109e-55 | 1.711510e-52 |
| MsG0380015402.01 | MsG0780040641.01 | 0.804414 | 2.184760e-49 | 1.125751e-46 |
| MsG0380015402.01 | MsG0780040830.01 | 0.822405 | 2.410428e-53 | 2.015806e-50 |
| MsG0380015402.01 | MsG0780040899.01 | 0.828638 | 8.041971e-55 | 8.040014e-52 |
| MsG0380015402.01 | MsG0780040978.01 | 0.888508 | 5.548458e-73 | 4.310851e-69 |
| MsG0380015402.01 | MsG0780040990.01 | 0.857592 | 1.469266e-62 | 3.645614e-59 |
| MsG0380015402.01 | MsG0780041219.01 | 0.839473 | 1.551576e-57 | 2.145027e-54 |
| MsG0380015402.01 | MsG0780041232.01 | 0.821180 | 4.629610e-53 | 3.739781e-50 |
| MsG0380015402.01 | MsG0780041273.01 | 0.813399 | 2.610831e-51 | 1.703211e-48 |
| MsG0380015402.01 | MsG0780041560.01 | 0.845743 | 3.357003e-59 | 5.650311e-56 |
| MsG0380015402.01 | MsG0780041591.01 | 0.843123 | 1.699869e-58 | 2.633077e-55 |
| MsG0380015402.01 | MsG0780041823.01 | 0.801892 | 7.266815e-49 | 3.510646e-46 |
| MsG0380015402.01 | MsG0880042392.01 | 0.861871 | 7.562911e-64 | 2.171222e-60 |
| MsG0380015402.01 | MsG0880042833.01 | 0.868871 | 4.729236e-66 | 1.738136e-62 |
| MsG0380015402.01 | MsG0880043684.01 | 0.843836 | 1.096544e-58 | 1.737253e-55 |
| MsG0380015402.01 | MsG0880043714.01 | 0.829320 | 5.497466e-55 | 5.608136e-52 |
| MsG0380015402.01 | MsG0880043907.01 | 0.831745 | 1.402396e-55 | 1.535943e-52 |
| MsG0380015402.01 | MsG0880044139.01 | 0.837135 | 6.212520e-57 | 7.994976e-54 |
| MsG0380015402.01 | MsG0880044356.01 | 0.805021 | 1.631884e-49 | 8.541545e-47 |
| MsG0380015402.01 | MsG0880044437.01 | 0.811657 | 6.275505e-51 | 3.906797e-48 |
| MsG0380015402.01 | MsG0880044968.01 | -0.802732 | 4.880181e-49 | 2.408592e-46 |
| MsG0380015402.01 | MsG0880045015.01 | 0.847013 | 1.512124e-59 | 2.651068e-56 |
| MsG0380015402.01 | MsG0880045356.01 | 0.902166 | 1.279400e-78 | 1.788696e-74 |
| MsG0380015402.01 | MsG0880045439.01 | 0.819299 | 1.248955e-52 | 9.573365e-50 |
| MsG0380015402.01 | MsG0880045584.01 | 0.817521 | 3.159422e-52 | 2.306100e-49 |
| MsG0380015402.01 | MsG0880045612.01 | 0.808638 | 2.806981e-50 | 1.613289e-47 |
| MsG0380015402.01 | MsG0880045647.01 | 0.858530 | 7.732633e-63 | 1.979559e-59 |
| MsG0380015402.01 | MsG0880045725.01 | 0.827150 | 1.833555e-54 | 1.755304e-51 |
| MsG0380015402.01 | MsG0880045761.01 | -0.821682 | 3.546067e-53 | 2.904797e-50 |
| MsG0380015402.01 | MsG0880045836.01 | 0.859602 | 3.691053e-63 | 9.802524e-60 |
| MsG0380015402.01 | MsG0880045991.01 | 0.809595 | 1.750937e-50 | 1.032372e-47 |
| MsG0380015402.01 | MsG0880046010.01 | -0.807277 | 5.467618e-50 | 3.032749e-47 |
| MsG0380015402.01 | MsG0880046904.01 | 0.807732 | 4.378743e-50 | 2.457638e-47 |
| MsG0380015402.01 | MsG0880046905.01 | 0.827166 | 1.817456e-54 | 1.740745e-51 |
| MsG0380015402.01 | MsG0880047057.01 | 0.810459 | 1.140902e-50 | 6.880800e-48 |
| MsG0380015402.01 | MsG0880047090.01 | 0.851034 | 1.153815e-60 | 2.304869e-57 |
| MsG0380015402.01 | MsG0880047146.01 | 0.804951 | 1.688318e-49 | 8.821490e-47 |
| MsG0380015402.01 | MsG0880047310.01 | 0.805632 | 1.215699e-49 | 6.463834e-47 |
| MsG0380015402.01 | MsG0880047331.01 | 0.824338 | 8.518585e-54 | 7.523441e-51 |
| MsG0380015402.01 | MsG0880047343.01 | -0.800117 | 1.675137e-48 | 7.736515e-46 |
| MsG0380015402.01 | MsG0880047414.01 | 0.851185 | 1.046221e-60 | 2.100421e-57 |
| MsG0380015402.01 | MsG0880047450.01 | 0.802314 | 5.949045e-49 | 2.905153e-46 |
| MsG0380015402.01 | MsG0880047649.01 | 0.810606 | 1.060299e-50 | 6.420049e-48 |
| MsG0380015402.01 | MsG0880047681.01 | 0.809184 | 2.145450e-50 | 1.251175e-47 |
| MsG0380015402.01 | MsG0880047704.01 | 0.826077 | 3.305728e-54 | 3.068426e-51 |
| MsG0280006717.01 | MsG0380015402.01 | 0.884893 | 1.299146e-71 | 8.725500e-68 |
| MsG0280006747.01 | MsG0380015402.01 | 0.819004 | 1.458013e-52 | 1.108698e-49 |
| MsG0280006851.01 | MsG0380015402.01 | 0.825876 | 3.690373e-54 | 3.406120e-51 |
| MsG0280007084.01 | MsG0380015402.01 | 0.824222 | 9.070518e-54 | 7.984870e-51 |
| MsG0280007092.01 | MsG0380015402.01 | 0.816363 | 5.749061e-52 | 4.065345e-49 |
| MsG0280007504.01 | MsG0380015402.01 | 0.825554 | 4.400176e-54 | 4.023853e-51 |
| MsG0280007919.01 | MsG0380015402.01 | 0.828574 | 8.335984e-55 | 8.318541e-52 |
| MsG0280010519.01 | MsG0380015402.01 | 0.808234 | 3.424175e-50 | 1.947399e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015402.01.T01 | MTR_3g069730 | 74.654 | 217 | 11 | 2 | 1 | 173 | 1 | 217 | 1.96e-110 | 313 |
| MsG0380015402.01.T01 | MTR_5g081560 | 68.852 | 122 | 31 | 2 | 54 | 173 | 95 | 211 | 1.29e-56 | 177 |
| MsG0380015402.01.T01 | MTR_3g069760 | 50.777 | 193 | 58 | 4 | 10 | 167 | 1 | 191 | 5.01e-53 | 167 |
| MsG0380015402.01.T01 | MTR_7g065920 | 66.372 | 113 | 34 | 3 | 60 | 169 | 119 | 230 | 1.91e-44 | 147 |
| MsG0380015402.01.T01 | MTR_8g086550 | 47.170 | 106 | 46 | 3 | 70 | 171 | 210 | 309 | 6.14e-26 | 100 |
| MsG0380015402.01.T01 | MTR_4g086500 | 46.154 | 104 | 50 | 2 | 70 | 171 | 210 | 309 | 2.51e-25 | 99.4 |
| MsG0380015402.01.T01 | MTR_2g016520 | 42.202 | 109 | 47 | 2 | 66 | 167 | 179 | 278 | 6.98e-25 | 97.8 |
| MsG0380015402.01.T01 | MTR_3g081490 | 50.000 | 46 | 23 | 0 | 65 | 110 | 249 | 294 | 3.68e-11 | 60.8 |
| MsG0380015402.01.T01 | MTR_3g081490 | 50.000 | 46 | 23 | 0 | 65 | 110 | 249 | 294 | 4.52e-11 | 60.5 |
| MsG0380015402.01.T01 | MTR_3g081490 | 50.000 | 46 | 23 | 0 | 65 | 110 | 249 | 294 | 4.57e-11 | 60.5 |
| MsG0380015402.01.T01 | MTR_4g059540 | 58.974 | 39 | 16 | 0 | 65 | 103 | 284 | 322 | 8.82e-11 | 60.1 |
| MsG0380015402.01.T01 | MTR_4g059540 | 58.974 | 39 | 16 | 0 | 65 | 103 | 284 | 322 | 9.79e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015402.01.T01 | AT5G05830 | 64.286 | 112 | 37 | 1 | 65 | 173 | 92 | 203 | 6.07e-42 | 139 |
| MsG0380015402.01.T01 | AT5G01070 | 52.991 | 117 | 48 | 3 | 63 | 173 | 89 | 204 | 1.74e-33 | 118 |
| MsG0380015402.01.T01 | AT2G37950 | 48.649 | 111 | 54 | 1 | 66 | 173 | 95 | 205 | 1.15e-31 | 113 |
| MsG0380015402.01.T01 | AT5G59000 | 49.524 | 105 | 47 | 2 | 67 | 169 | 127 | 227 | 4.61e-27 | 102 |
| MsG0380015402.01.T01 | AT2G34200 | 37.273 | 110 | 61 | 3 | 61 | 170 | 118 | 219 | 4.16e-16 | 73.2 |
| MsG0380015402.01.T01 | AT2G34200 | 37.273 | 110 | 61 | 3 | 61 | 170 | 118 | 219 | 4.16e-16 | 73.2 |
| MsG0380015402.01.T01 | AT5G60580 | 52.174 | 46 | 22 | 0 | 65 | 110 | 266 | 311 | 2.95e-11 | 61.2 |
| MsG0380015402.01.T01 | AT5G60580 | 52.174 | 46 | 22 | 0 | 65 | 110 | 266 | 311 | 2.95e-11 | 61.2 |
| MsG0380015402.01.T01 | AT5G60580 | 52.174 | 46 | 22 | 0 | 65 | 110 | 266 | 311 | 2.97e-11 | 61.2 |
| MsG0380015402.01.T01 | AT5G60580 | 52.174 | 46 | 22 | 0 | 65 | 110 | 266 | 311 | 2.97e-11 | 61.2 |
Find 61 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTTATTTCTTCTCATT+TGG | 0.154678 | 3:+69643562 | MsG0380015402.01.T01:three_prime_UTR |
| AAGCTTCAGCACATTGTTTA+TGG | 0.164350 | 3:-69641035 | None:intergenic |
| TCCTGAAGTTATAGGATTTC+AGG | 0.175642 | 3:-69643258 | None:intergenic |
| CTGCTAGATCCTGAAGTTAT+AGG | 0.214776 | 3:-69643266 | None:intergenic |
| CCAGCTTCCAAACATAATTT+AGG | 0.216231 | 3:+69643454 | MsG0380015402.01.T01:three_prime_UTR |
| CTTCTTATTTCTTCTCATTT+GGG | 0.238153 | 3:+69643563 | MsG0380015402.01.T01:three_prime_UTR |
| ATGTGCTGAAGCTTGGTTTA+AGG | 0.266567 | 3:+69641044 | MsG0380015402.01.T01:CDS |
| AATCTTCATGTCATGGCTTT+GGG | 0.337486 | 3:-69640678 | None:intergenic |
| GAATCTTCATGTCATGGCTT+TGG | 0.342745 | 3:-69640679 | None:intergenic |
| AGCTTCAGCACATTGTTTAT+GGG | 0.344321 | 3:-69641034 | None:intergenic |
| GAATTTCCTCCTTGCCTGTA+TGG | 0.353899 | 3:+69643190 | MsG0380015402.01.T01:CDS |
| GATACTTCCTAAATTATGTT+TGG | 0.383113 | 3:-69643461 | None:intergenic |
| CTTCTCATTTGGGTTATGAA+TGG | 0.389944 | 3:+69643573 | MsG0380015402.01.T01:three_prime_UTR |
| GATGATGACCAACATGAATC+TGG | 0.390187 | 3:+69640964 | MsG0380015402.01.T01:CDS |
| TCATTGCCTTTGTCATCTCC+TGG | 0.395813 | 3:+69643213 | MsG0380015402.01.T01:CDS |
| TCCATTGCTAGAAATGTATC+TGG | 0.396063 | 3:+69643053 | MsG0380015402.01.T01:CDS |
| TCCTGAAATCCTATAACTTC+AGG | 0.402202 | 3:+69643257 | MsG0380015402.01.T01:exon |
| ACACGAACATCCTAGTTCAA+TGG | 0.404206 | 3:-69640992 | None:intergenic |
| CCTAAATTATGTTTGGAAGC+TGG | 0.430685 | 3:-69643454 | None:intergenic |
| CACGAACATCCTAGTTCAAT+GGG | 0.431600 | 3:-69640991 | None:intergenic |
| CATGGTACCTGTGTTTATAA+TGG | 0.435036 | 3:-69643324 | None:intergenic |
| GTAAGATGATTGAGGATTTG+TGG | 0.435692 | 3:+69643289 | MsG0380015402.01.T01:three_prime_UTR |
| AAGTTATAACTTATAATAAC+AGG | 0.436688 | 3:-69643520 | None:intergenic |
| GGCGTTGAGTTTCTGCAGGT+GGG | 0.455693 | 3:-69643151 | None:intergenic |
| CGTTGAGTTTCTGCAGGTGG+GGG | 0.472177 | 3:-69643149 | None:intergenic |
| ATAAACAATGTGCTGAAGCT+TGG | 0.476006 | 3:+69641037 | MsG0380015402.01.T01:CDS |
| ATGTTCGTGTAAAGATGATT+TGG | 0.486734 | 3:+69641005 | MsG0380015402.01.T01:CDS |
| CAAGGAGGAAATTCAAGAAC+CGG | 0.500384 | 3:-69643181 | None:intergenic |
| TGAAGCTTGGTTTAAGGTCA+AGG | 0.518133 | 3:+69641050 | MsG0380015402.01.T01:CDS |
| AACTCTACAGCGGAGAATGT+TGG | 0.523212 | 3:+69640797 | MsG0380015402.01.T01:CDS |
| ACCAGATACATTTCTAGCAA+TGG | 0.523936 | 3:-69643054 | None:intergenic |
| AGGCGTTGAGTTTCTGCAGG+TGG | 0.528353 | 3:-69643152 | None:intergenic |
| CCAAATGAGAAGAAATAAGA+AGG | 0.535311 | 3:-69643562 | None:intergenic |
| AATTCAAGAACCGGTGGAGT+AGG | 0.535576 | 3:-69643172 | None:intergenic |
| AGTAGGCGTTGAGTTTCTGC+AGG | 0.542394 | 3:-69643155 | None:intergenic |
| TGTTCAAGTAAGTAACAAGA+AGG | 0.544984 | 3:+69643389 | MsG0380015402.01.T01:three_prime_UTR |
| AGTTGAGAATCTTCATGTCA+TGG | 0.547212 | 3:-69640685 | None:intergenic |
| CTATAACTTCAGGATCTAGC+AGG | 0.548028 | 3:+69643267 | MsG0380015402.01.T01:three_prime_UTR |
| TCTGGGACTCCCATTGAACT+AGG | 0.554284 | 3:+69640982 | MsG0380015402.01.T01:CDS |
| GACAAAGGCAATGACCATAC+AGG | 0.555573 | 3:-69643204 | None:intergenic |
| AAACTCAACGCCTACTCCAC+CGG | 0.563737 | 3:+69643162 | MsG0380015402.01.T01:CDS |
| GCGTTGAGTTTCTGCAGGTG+GGG | 0.569049 | 3:-69643150 | None:intergenic |
| TCTAGCAGGTAAGATGATTG+AGG | 0.586586 | 3:+69643281 | MsG0380015402.01.T01:three_prime_UTR |
| ATGATGACCAACATGAATCT+GGG | 0.596167 | 3:+69640965 | MsG0380015402.01.T01:CDS |
| TTGAGGACTGCATTGTGTTG+AGG | 0.599028 | 3:+69643622 | MsG0380015402.01.T01:three_prime_UTR |
| TACAGAACTTGTGAAATCTG+TGG | 0.602282 | 3:+69643029 | MsG0380015402.01.T01:intron |
| GAAGCTTGGTTTAAGGTCAA+GGG | 0.608837 | 3:+69641051 | MsG0380015402.01.T01:CDS |
| ATAAGAAGGCAGTTGAGACA+AGG | 0.609592 | 3:-69643548 | None:intergenic |
| GTTCAAGTAAGTAACAAGAA+GGG | 0.613575 | 3:+69643390 | MsG0380015402.01.T01:three_prime_UTR |
| ACTTGTCTTGTCCTGCGTGA+AGG | 0.618259 | 3:-69640727 | None:intergenic |
| ACATTGAAAATGCATCTCCT+CGG | 0.624698 | 3:+69640774 | MsG0380015402.01.T01:CDS |
| TGGGAGTCCCAGATTCATGT+TGG | 0.638328 | 3:-69640972 | None:intergenic |
| GGAGGAAATTCAAGAACCGG+TGG | 0.655498 | 3:-69643178 | None:intergenic |
| TCTGTGACCATTATAAACAC+AGG | 0.659282 | 3:+69643317 | MsG0380015402.01.T01:three_prime_UTR |
| AGGCAATGACCATACAGGCA+AGG | 0.660733 | 3:-69643199 | None:intergenic |
| ATCGAAAATGTCCTTCACGC+AGG | 0.666258 | 3:+69640716 | MsG0380015402.01.T01:CDS |
| TTCTCCGCTGTAGAGTTCCG+AGG | 0.672525 | 3:-69640791 | None:intergenic |
| CAATGACCATACAGGCAAGG+AGG | 0.693990 | 3:-69643196 | None:intergenic |
| AAGTTGAAATGACAGAACAG+TGG | 0.697944 | 3:+69643084 | MsG0380015402.01.T01:CDS |
| ATCTCCTCGGAACTCTACAG+CGG | 0.720267 | 3:+69640787 | MsG0380015402.01.T01:CDS |
| AGAGACGCGTGAATTGAACA+TGG | 0.743408 | 3:-69643342 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAAAAAAAAAATGACT+AGG | + | Chr3:69641547-69641566 | MsG0380015402.01.T01:intron | 10.0% |
| !! | AAGTTATAACTTATAATAAC+AGG | - | Chr3:69643523-69643542 | None:intergenic | 15.0% |
| !! | CAAAAATCAAGTAAATTATT+GGG | + | Chr3:69641661-69641680 | MsG0380015402.01.T01:intron | 15.0% |
| !! | TCAAAAATCAAGTAAATTAT+TGG | + | Chr3:69641660-69641679 | MsG0380015402.01.T01:intron | 15.0% |
| !!! | AAGTTAACTGTTTTATTTTT+TGG | + | Chr3:69642978-69642997 | MsG0380015402.01.T01:intron | 15.0% |
| !!! | ATTAACATTGTTTCTTAATT+AGG | + | Chr3:69641099-69641118 | MsG0380015402.01.T01:intron | 15.0% |
| !!! | TTAATTCTTTATTCCATTTT+GGG | + | Chr3:69642523-69642542 | MsG0380015402.01.T01:intron | 15.0% |
| !!! | TTTTAGAAAAACATGTTATA+TGG | - | Chr3:69642212-69642231 | None:intergenic | 15.0% |
| !! | CTTCTATAAATACTTCTAAT+TGG | + | Chr3:69642920-69642939 | MsG0380015402.01.T01:intron | 20.0% |
| !! | TCATTATCTTATTAATAGAC+TGG | + | Chr3:69642600-69642619 | MsG0380015402.01.T01:intron | 20.0% |
| !!! | CTTAATTCTTTATTCCATTT+TGG | + | Chr3:69642522-69642541 | MsG0380015402.01.T01:intron | 20.0% |
| !!! | GAAGTATTTATAGAAGTATA+AGG | - | Chr3:69642916-69642935 | None:intergenic | 20.0% |
| !!! | GTTAAACTACTATAATCTTT+TGG | + | Chr3:69642577-69642596 | MsG0380015402.01.T01:intron | 20.0% |
| !!! | TATTTATAGAAGTATAAGGA+TGG | - | Chr3:69642912-69642931 | None:intergenic | 20.0% |
| !!! | TGATTTTTGAATAATAGAAC+AGG | - | Chr3:69641650-69641669 | None:intergenic | 20.0% |
| ! | AAATGAAGTTGTTTATCCAA+AGG | + | Chr3:69641945-69641964 | MsG0380015402.01.T01:intron | 25.0% |
| ! | CCAAATTTACATGAATCAAA+AGG | - | Chr3:69642665-69642684 | None:intergenic | 25.0% |
| ! | CTGCGATATAAAAACATTTA+GGG | - | Chr3:69642379-69642398 | None:intergenic | 25.0% |
| ! | GAAAGTCTGAAAATTGATAA+TGG | + | Chr3:69642486-69642505 | MsG0380015402.01.T01:intron | 25.0% |
| ! | GATACTTCCTAAATTATGTT+TGG | - | Chr3:69643464-69643483 | None:intergenic | 25.0% |
| ! | TATCATAATTGTGCTTGAAT+TGG | - | Chr3:69641506-69641525 | None:intergenic | 25.0% |
| ! | TGTAAATTTGGAAAACATCT+TGG | + | Chr3:69642674-69642693 | MsG0380015402.01.T01:intron | 25.0% |
| ! | TTATCTTTATAAGGTCTCAA+GGG | + | Chr3:69641835-69641854 | MsG0380015402.01.T01:intron | 25.0% |
| ! | TTCTTAATTAGGTGTGTAAT+GGG | + | Chr3:69641110-69641129 | MsG0380015402.01.T01:intron | 25.0% |
| ! | TTTCTTAATTAGGTGTGTAA+TGG | + | Chr3:69641109-69641128 | MsG0380015402.01.T01:intron | 25.0% |
| !! | ATCTAAAATGTTTCTACCTT+TGG | - | Chr3:69641964-69641983 | None:intergenic | 25.0% |
| !! | CTTCTTATTTCTTCTCATTT+GGG | + | Chr3:69643563-69643582 | MsG0380015402.01.T01:three_prime_UTR | 25.0% |
| !! | GTTTTCAGCTTATCTTTATA+AGG | + | Chr3:69641826-69641845 | MsG0380015402.01.T01:intron | 25.0% |
| !! | TTGTGTAGTAAATAGTTTGT+AGG | + | Chr3:69641479-69641498 | MsG0380015402.01.T01:intron | 25.0% |
| !! | TTTTTGAATAATAGAACAGG+AGG | - | Chr3:69641647-69641666 | None:intergenic | 25.0% |
| !!! | CAAAGCATATCATTTTTATC+TGG | - | Chr3:69641462-69641481 | None:intergenic | 25.0% |
| !!! | CCCTTTTTGTTTTCAAAATA+CGG | + | Chr3:69642185-69642204 | MsG0380015402.01.T01:intron | 25.0% |
| !!! | CCGTATTTTGAAAACAAAAA+GGG | - | Chr3:69642188-69642207 | None:intergenic | 25.0% |
| !!! | CCTTTTGATTCATGTAAATT+TGG | + | Chr3:69642662-69642681 | MsG0380015402.01.T01:intron | 25.0% |
| !!! | CTGCAAAAATATTTTGTTGT+TGG | + | Chr3:69643419-69643438 | MsG0380015402.01.T01:three_prime_UTR | 25.0% |
| !!! | TCCGTATTTTGAAAACAAAA+AGG | - | Chr3:69642189-69642208 | None:intergenic | 25.0% |
| !!! | TTTGCTTTTATGTGATGTTA+CGG | + | Chr3:69642106-69642125 | MsG0380015402.01.T01:intron | 25.0% |
| AACAATATGAGAGCTTACAA+AGG | - | Chr3:69642062-69642081 | None:intergenic | 30.0% | |
| AATGGGTATAGACGAATATA+AGG | + | Chr3:69641704-69641723 | MsG0380015402.01.T01:intron | 30.0% | |
| AGATTCTACTTCCTTCTAAT+AGG | - | Chr3:69642087-69642106 | None:intergenic | 30.0% | |
| AGTTGAATCAAATCACAACT+AGG | - | Chr3:69642462-69642481 | None:intergenic | 30.0% | |
| ATGCTTGAATTCACATACTA+TGG | - | Chr3:69642802-69642821 | None:intergenic | 30.0% | |
| ATGTTCGTGTAAAGATGATT+TGG | + | Chr3:69641005-69641024 | MsG0380015402.01.T01:CDS | 30.0% | |
| CATATTGTTTCCCTATTAGA+AGG | + | Chr3:69642073-69642092 | MsG0380015402.01.T01:intron | 30.0% | |
| CCAAATGAGAAGAAATAAGA+AGG | - | Chr3:69643565-69643584 | None:intergenic | 30.0% | |
| CCTGCGATATAAAAACATTT+AGG | - | Chr3:69642380-69642399 | None:intergenic | 30.0% | |
| CTTATCTTTATAAGGTCTCA+AGG | + | Chr3:69641834-69641853 | MsG0380015402.01.T01:intron | 30.0% | |
| GATTCTACTTCCTTCTAATA+GGG | - | Chr3:69642086-69642105 | None:intergenic | 30.0% | |
| GTTCAAGTAAGTAACAAGAA+GGG | + | Chr3:69643390-69643409 | MsG0380015402.01.T01:three_prime_UTR | 30.0% | |
| TGTTCAAGTAAGTAACAAGA+AGG | + | Chr3:69643389-69643408 | MsG0380015402.01.T01:three_prime_UTR | 30.0% | |
| ! | AAAAACATTTAGGGTGTGTT+TGG | - | Chr3:69642370-69642389 | None:intergenic | 30.0% |
| ! | AAAAGTGACAAATGTTGGTT+AGG | + | Chr3:69642878-69642897 | MsG0380015402.01.T01:intron | 30.0% |
| ! | CCTTCTTATTTCTTCTCATT+TGG | + | Chr3:69643562-69643581 | MsG0380015402.01.T01:three_prime_UTR | 30.0% |
| ! | CTTGTGGCGAATTTTTATAT+TGG | + | Chr3:69642702-69642721 | MsG0380015402.01.T01:intron | 30.0% |
| ! | GAAACAGTTTAGTCTTCTAA+GGG | + | Chr3:69642128-69642147 | MsG0380015402.01.T01:intron | 30.0% |
| ! | GCAATATTTTACCATCAAAC+AGG | - | Chr3:69642751-69642770 | None:intergenic | 30.0% |
| ! | TCATATTTTTCACAACATGC+AGG | + | Chr3:69643484-69643503 | MsG0380015402.01.T01:three_prime_UTR | 30.0% |
| !! | CCTAAATGTTTTTATATCGC+AGG | + | Chr3:69642377-69642396 | MsG0380015402.01.T01:intron | 30.0% |
| !!! | ATTTGTCACTTTTCTACCTT+TGG | - | Chr3:69642871-69642890 | None:intergenic | 30.0% |
| !!! | TCTTTATTCCATTTTGGGTT+TGG | + | Chr3:69642528-69642547 | MsG0380015402.01.T01:intron | 30.0% |
| AAACATCTTGGAAACTCTTG+TGG | + | Chr3:69642686-69642705 | MsG0380015402.01.T01:intron | 35.0% | |
| AAGCTTCAGCACATTGTTTA+TGG | - | Chr3:69641038-69641057 | None:intergenic | 35.0% | |
| AAGTAGTTGTTCAAGTCCAA+AGG | + | Chr3:69642852-69642871 | MsG0380015402.01.T01:intron | 35.0% | |
| AAGTTGAAATGACAGAACAG+TGG | + | Chr3:69643084-69643103 | MsG0380015402.01.T01:CDS | 35.0% | |
| AATATTCTCGGAGGTTTAGA+TGG | + | Chr3:69641374-69641393 | MsG0380015402.01.T01:intron | 35.0% | |
| AATCTTCATGTCATGGCTTT+GGG | - | Chr3:69640681-69640700 | None:intergenic | 35.0% | |
| ACAACTTCATTTGCAGCTTA+TGG | - | Chr3:69641937-69641956 | None:intergenic | 35.0% | |
| ACATGAGTGACTCAAATAGT+AGG | - | Chr3:69641343-69641362 | None:intergenic | 35.0% | |
| ACATTGAAAATGCATCTCCT+CGG | + | Chr3:69640774-69640793 | MsG0380015402.01.T01:CDS | 35.0% | |
| ACTAGATTGAGACATGCTAT+TGG | + | Chr3:69641423-69641442 | MsG0380015402.01.T01:intron | 35.0% | |
| ACTCACTATTAGTGCTTCAT+AGG | + | Chr3:69641308-69641327 | MsG0380015402.01.T01:intron | 35.0% | |
| AGCTTCAGCACATTGTTTAT+GGG | - | Chr3:69641037-69641056 | None:intergenic | 35.0% | |
| AGTTGAGAATCTTCATGTCA+TGG | - | Chr3:69640688-69640707 | None:intergenic | 35.0% | |
| ATAAACAATGTGCTGAAGCT+TGG | + | Chr3:69641037-69641056 | MsG0380015402.01.T01:CDS | 35.0% | |
| ATATCAAACATGATGTGCAC+TGG | - | Chr3:69642024-69642043 | None:intergenic | 35.0% | |
| ATGATGACCAACATGAATCT+GGG | + | Chr3:69640965-69640984 | MsG0380015402.01.T01:CDS | 35.0% | |
| ATGATTGTCTGAGAGAACTT+AGG | + | Chr3:69641775-69641794 | MsG0380015402.01.T01:intron | 35.0% | |
| ATTGGCTGGATTAATTCTCA+TGG | + | Chr3:69642720-69642739 | MsG0380015402.01.T01:intron | 35.0% | |
| CATGGTACCTGTGTTTATAA+TGG | - | Chr3:69643327-69643346 | None:intergenic | 35.0% | |
| CCAGCTTCCAAACATAATTT+AGG | + | Chr3:69643454-69643473 | MsG0380015402.01.T01:three_prime_UTR | 35.0% | |
| CCTAAATTATGTTTGGAAGC+TGG | - | Chr3:69643457-69643476 | None:intergenic | 35.0% | |
| GGTAGAAAAGTGACAAATGT+TGG | + | Chr3:69642873-69642892 | MsG0380015402.01.T01:intron | 35.0% | |
| GTAAGATGATTGAGGATTTG+TGG | + | Chr3:69643289-69643308 | MsG0380015402.01.T01:three_prime_UTR | 35.0% | |
| TACAGAACTTGTGAAATCTG+TGG | + | Chr3:69643029-69643048 | MsG0380015402.01.T01:intron | 35.0% | |
| TAGGATTTGTCATCTCAGTA+TGG | + | Chr3:69640927-69640946 | MsG0380015402.01.T01:intron | 35.0% | |
| TATCAAACATGATGTGCACT+GGG | - | Chr3:69642023-69642042 | None:intergenic | 35.0% | |
| TCCATTGCTAGAAATGTATC+TGG | + | Chr3:69643053-69643072 | MsG0380015402.01.T01:CDS | 35.0% | |
| TCCTGAAATCCTATAACTTC+AGG | + | Chr3:69643257-69643276 | MsG0380015402.01.T01:exon | 35.0% | |
| TCCTGAAGTTATAGGATTTC+AGG | - | Chr3:69643261-69643280 | None:intergenic | 35.0% | |
| TCTGTGACCATTATAAACAC+AGG | + | Chr3:69643317-69643336 | MsG0380015402.01.T01:three_prime_UTR | 35.0% | |
| TGACATGTGCTGAATATTCT+CGG | + | Chr3:69641362-69641381 | MsG0380015402.01.T01:intron | 35.0% | |
| TTTATATCGCAGGTACTTAG+AGG | + | Chr3:69642387-69642406 | MsG0380015402.01.T01:intron | 35.0% | |
| ! | ACATTTTAGATAACCAGAGC+TGG | + | Chr3:69641973-69641992 | MsG0380015402.01.T01:intron | 35.0% |
| ! | AGTGTGGTTAATGTTGATGA+TGG | + | Chr3:69640889-69640908 | MsG0380015402.01.T01:intron | 35.0% |
| ! | ATACCCATTTTACCCTTTTC+TGG | - | Chr3:69641693-69641712 | None:intergenic | 35.0% |
| ! | ATAGAAGTATAAGGATGGCT+TGG | - | Chr3:69642907-69642926 | None:intergenic | 35.0% |
| ! | ATTTTAGATAACCAGAGCTG+GGG | + | Chr3:69641975-69641994 | MsG0380015402.01.T01:intron | 35.0% |
| ! | CATTTTAGATAACCAGAGCT+GGG | + | Chr3:69641974-69641993 | MsG0380015402.01.T01:intron | 35.0% |
| ! | CTTCTCATTTGGGTTATGAA+TGG | + | Chr3:69643573-69643592 | MsG0380015402.01.T01:three_prime_UTR | 35.0% |
| ! | GGAAACAGTTTAGTCTTCTA+AGG | + | Chr3:69642127-69642146 | MsG0380015402.01.T01:intron | 35.0% |
| ! | TACCCATTTTACCCTTTTCT+GGG | - | Chr3:69641692-69641711 | None:intergenic | 35.0% |
| ! | TCCAACTTTTATGTGACAGT+TGG | - | Chr3:69642626-69642645 | None:intergenic | 35.0% |
| ! | TGCATTTTCAATGTTGTCGA+CGG | - | Chr3:69640768-69640787 | None:intergenic | 35.0% |
| ! | TGGCGAATTTTTATATTGGC+TGG | + | Chr3:69642706-69642725 | MsG0380015402.01.T01:intron | 35.0% |
| ! | TGTGTTTGGATTGATGGTAT+AGG | + | Chr3:69642151-69642170 | MsG0380015402.01.T01:intron | 35.0% |
| ! | TTTGGATTGATGGTATAGGA+GGG | + | Chr3:69642155-69642174 | MsG0380015402.01.T01:intron | 35.0% |
| !! | ACCAGATACATTTCTAGCAA+TGG | - | Chr3:69643057-69643076 | None:intergenic | 35.0% |
| !! | TGTAGCATTGACACTTATGA+TGG | + | Chr3:69641193-69641212 | MsG0380015402.01.T01:intron | 35.0% |
| AAAAAGCCAGGAGATGACAA+AGG | - | Chr3:69643222-69643241 | None:intergenic | 40.0% | |
| AAGTGAAACTTGCAAGATGC+AGG | - | Chr3:69641617-69641636 | None:intergenic | 40.0% | |
| ACACGAACATCCTAGTTCAA+TGG | - | Chr3:69640995-69641014 | None:intergenic | 40.0% | |
| AGCGAGAGAGAGAAAAATTG+AGG | + | Chr3:69643605-69643624 | MsG0380015402.01.T01:three_prime_UTR | 40.0% | |
| ATAAGAAGGCAGTTGAGACA+AGG | - | Chr3:69643551-69643570 | None:intergenic | 40.0% | |
| ATGGACTTCATGTGGAGAAT+GGG | + | Chr3:69642410-69642429 | MsG0380015402.01.T01:intron | 40.0% | |
| ATGGTGTGAAGAGAGATTGT+AGG | + | Chr3:69640908-69640927 | MsG0380015402.01.T01:intron | 40.0% | |
| ATGTGCTGAAGCTTGGTTTA+AGG | + | Chr3:69641044-69641063 | MsG0380015402.01.T01:CDS | 40.0% | |
| ATGTTGTGTGGATTTGGATC+TGG | + | Chr3:69640864-69640883 | MsG0380015402.01.T01:intron | 40.0% | |
| CAAATAGAAGCGAAAAAGCC+AGG | - | Chr3:69643234-69643253 | None:intergenic | 40.0% | |
| CAAGGAGGAAATTCAAGAAC+CGG | - | Chr3:69643184-69643203 | None:intergenic | 40.0% | |
| CACGAACATCCTAGTTCAAT+GGG | - | Chr3:69640994-69641013 | None:intergenic | 40.0% | |
| CTATAACTTCAGGATCTAGC+AGG | + | Chr3:69643267-69643286 | MsG0380015402.01.T01:three_prime_UTR | 40.0% | |
| CTGCTAGATCCTGAAGTTAT+AGG | - | Chr3:69643269-69643288 | None:intergenic | 40.0% | |
| GAATCTTCATGTCATGGCTT+TGG | - | Chr3:69640682-69640701 | None:intergenic | 40.0% | |
| GATGATGACCAACATGAATC+TGG | + | Chr3:69640964-69640983 | MsG0380015402.01.T01:CDS | 40.0% | |
| GCCAACTGTCACATAAAAGT+TGG | + | Chr3:69642622-69642641 | MsG0380015402.01.T01:intron | 40.0% | |
| GTCCCAGAAAAGGGTAAAAT+GGG | + | Chr3:69641687-69641706 | MsG0380015402.01.T01:intron | 40.0% | |
| GTGAATTCAAGCATGTACTG+CGG | + | Chr3:69642808-69642827 | MsG0380015402.01.T01:intron | 40.0% | |
| TCTAGCAGGTAAGATGATTG+AGG | + | Chr3:69643281-69643300 | MsG0380015402.01.T01:three_prime_UTR | 40.0% | |
| TGTCCCAGAAAAGGGTAAAA+TGG | + | Chr3:69641686-69641705 | MsG0380015402.01.T01:intron | 40.0% | |
| ! | ACATTTAGGGTGTGTTTGGA+TGG | - | Chr3:69642366-69642385 | None:intergenic | 40.0% |
| ! | GAAGCTTGGTTTAAGGTCAA+GGG | + | Chr3:69641051-69641070 | MsG0380015402.01.T01:CDS | 40.0% |
| ! | GCATTTTCAATGTTGTCGAC+GGG | - | Chr3:69640767-69640786 | None:intergenic | 40.0% |
| ! | GTTTGGATTGATGGTATAGG+AGG | + | Chr3:69642154-69642173 | MsG0380015402.01.T01:intron | 40.0% |
| ! | TAAGGGTGTGTTTGGATTGA+TGG | + | Chr3:69642145-69642164 | MsG0380015402.01.T01:intron | 40.0% |
| ! | TAGTCTTCTAAGGGTGTGTT+TGG | + | Chr3:69642137-69642156 | MsG0380015402.01.T01:intron | 40.0% |
| ! | TCATGGCTTTACCTGTTTGA+TGG | + | Chr3:69642737-69642756 | MsG0380015402.01.T01:intron | 40.0% |
| ! | TGAAGCTTGGTTTAAGGTCA+AGG | + | Chr3:69641050-69641069 | MsG0380015402.01.T01:CDS | 40.0% |
| ! | TTGGATTGATGGTATAGGAG+GGG | + | Chr3:69642156-69642175 | MsG0380015402.01.T01:intron | 40.0% |
| AACAGAGCAGAGTGCACAAT+TGG | - | Chr3:69642560-69642579 | None:intergenic | 45.0% | |
| AACTCTACAGCGGAGAATGT+TGG | + | Chr3:69640797-69640816 | MsG0380015402.01.T01:CDS | 45.0% | |
| AATTCAAGAACCGGTGGAGT+AGG | - | Chr3:69643175-69643194 | None:intergenic | 45.0% | |
| AGAGACGCGTGAATTGAACA+TGG | - | Chr3:69643345-69643364 | None:intergenic | 45.0% | |
| AGGTGCATCAGCATTTGCAT+AGG | + | Chr3:69641567-69641586 | MsG0380015402.01.T01:intron | 45.0% | |
| AGTGTCTTCTGTGTCTGTGT+CGG | + | Chr3:69640840-69640859 | MsG0380015402.01.T01:intron | 45.0% | |
| ATCGAAAATGTCCTTCACGC+AGG | + | Chr3:69640716-69640735 | MsG0380015402.01.T01:CDS | 45.0% | |
| ATTGGGTGTGTCCCAGAAAA+GGG | + | Chr3:69641678-69641697 | MsG0380015402.01.T01:intron | 45.0% | |
| CACATGTGTCAGTGTTGTGT+CGG | - | Chr3:69641228-69641247 | None:intergenic | 45.0% | |
| CATGTGCTGAATATTCTCGG+AGG | + | Chr3:69641365-69641384 | MsG0380015402.01.T01:intron | 45.0% | |
| GAATTTCCTCCTTGCCTGTA+TGG | + | Chr3:69643190-69643209 | MsG0380015402.01.T01:CDS | 45.0% | |
| GACAAAGGCAATGACCATAC+AGG | - | Chr3:69643207-69643226 | None:intergenic | 45.0% | |
| GGTCAACTCCAAACCCAAAA+TGG | - | Chr3:69642539-69642558 | None:intergenic | 45.0% | |
| GTCGGAATGTTGTGTGGATT+TGG | + | Chr3:69640858-69640877 | MsG0380015402.01.T01:intron | 45.0% | |
| TATCGCAGGTACTTAGAGGA+TGG | + | Chr3:69642391-69642410 | MsG0380015402.01.T01:intron | 45.0% | |
| TATTGGGTGTGTCCCAGAAA+AGG | + | Chr3:69641677-69641696 | MsG0380015402.01.T01:intron | 45.0% | |
| TCATTGCCTTTGTCATCTCC+TGG | + | Chr3:69643213-69643232 | MsG0380015402.01.T01:CDS | 45.0% | |
| TGGGGACGAAAATTCAGTAG+AGG | + | Chr3:69641993-69642012 | MsG0380015402.01.T01:intron | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | - | Chr3:69642356-69642375 | None:intergenic | 45.0% | |
| TTAGGGTGTGTTTGGATGGA+GGG | - | Chr3:69642362-69642381 | None:intergenic | 45.0% | |
| TTGAGGACTGCATTGTGTTG+AGG | + | Chr3:69643622-69643641 | MsG0380015402.01.T01:three_prime_UTR | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | - | Chr3:69642352-69642371 | None:intergenic | 45.0% | |
| ! | ATTGATGGTATAGGAGGGGA+AGG | + | Chr3:69642160-69642179 | MsG0380015402.01.T01:intron | 45.0% |
| ! | CTTAGAGGATGGACTTCATG+TGG | + | Chr3:69642402-69642421 | MsG0380015402.01.T01:intron | 45.0% |
| ! | GATGGACTTCATGTGGAGAA+TGG | + | Chr3:69642409-69642428 | MsG0380015402.01.T01:intron | 45.0% |
| ! | TGCGTGAAGGACATTTTCGA+TGG | - | Chr3:69640717-69640736 | None:intergenic | 45.0% |
| ! | TTTAGGGTGTGTTTGGATGG+AGG | - | Chr3:69642363-69642382 | None:intergenic | 45.0% |
| !!! | TTTTTAATTATTTAGAAAAA+GGG | - | Chr3:69641537-69641556 | None:intergenic | 5.0% |
| !!! | TTTTTTAATTATTTAGAAAA+AGG | - | Chr3:69641538-69641557 | None:intergenic | 5.0% |
| AAACTCAACGCCTACTCCAC+CGG | + | Chr3:69643162-69643181 | MsG0380015402.01.T01:CDS | 50.0% | |
| ACTTGTCTTGTCCTGCGTGA+AGG | - | Chr3:69640730-69640749 | None:intergenic | 50.0% | |
| AGGCAATGACCATACAGGCA+AGG | - | Chr3:69643202-69643221 | None:intergenic | 50.0% | |
| ATCTCCTCGGAACTCTACAG+CGG | + | Chr3:69640787-69640806 | MsG0380015402.01.T01:CDS | 50.0% | |
| CAATGACCATACAGGCAAGG+AGG | - | Chr3:69643199-69643218 | None:intergenic | 50.0% | |
| GGAGGAAATTCAAGAACCGG+TGG | - | Chr3:69643181-69643200 | None:intergenic | 50.0% | |
| GGATTTGGATCTGGAGAGTG+TGG | + | Chr3:69640873-69640892 | MsG0380015402.01.T01:intron | 50.0% | |
| GTCTGTGTCGGAATGTTGTG+TGG | + | Chr3:69640852-69640871 | MsG0380015402.01.T01:intron | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | - | Chr3:69642353-69642372 | None:intergenic | 50.0% | |
| TGGGAGTCCCAGATTCATGT+TGG | - | Chr3:69640975-69640994 | None:intergenic | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | - | Chr3:69642351-69642370 | None:intergenic | 50.0% | |
| ! | TCTGGGACTCCCATTGAACT+AGG | + | Chr3:69640982-69641001 | MsG0380015402.01.T01:CDS | 50.0% |
| ! | TGAATTTTCGTCCCCAGCTC+TGG | - | Chr3:69641989-69642008 | None:intergenic | 50.0% |
| !! | AGTAGGCGTTGAGTTTCTGC+AGG | - | Chr3:69643158-69643177 | None:intergenic | 50.0% |
| CGTTGAGTTTCTGCAGGTGG+GGG | - | Chr3:69643152-69643171 | None:intergenic | 55.0% | |
| GCGTTGAGTTTCTGCAGGTG+GGG | - | Chr3:69643153-69643172 | None:intergenic | 55.0% | |
| TGGATGGAGGGTTTAGGAGG+GGG | - | Chr3:69642350-69642369 | None:intergenic | 55.0% | |
| TTCTCCGCTGTAGAGTTCCG+AGG | - | Chr3:69640794-69640813 | None:intergenic | 55.0% | |
| ! | GGCGTTGAGTTTCTGCAGGT+GGG | - | Chr3:69643154-69643173 | None:intergenic | 55.0% |
| !! | AGGCGTTGAGTTTCTGCAGG+TGG | - | Chr3:69643155-69643174 | None:intergenic | 55.0% |
| ATGGAGGGTTTAGGAGGGGG+AGG | - | Chr3:69642347-69642366 | None:intergenic | 60.0% | |
| TGAGTTTCTGCAGGTGGGGG+AGG | - | Chr3:69643149-69643168 | None:intergenic | 60.0% | |
| TGGAGGGTTTAGGAGGGGGA+GGG | - | Chr3:69642346-69642365 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGGAGGG+AGG | - | Chr3:69642343-69642362 | None:intergenic | 65.0% | |
| GCAGGTGGGGGAGGTCTAGT+TGG | - | Chr3:69643140-69643159 | None:intergenic | 65.0% | |
| GGGTTTAGGAGGGGGAGGGA+GGG | - | Chr3:69642342-69642361 | None:intergenic | 65.0% | |
| GGTGGGGGAGGTCTAGTTGG+TGG | - | Chr3:69643137-69643156 | None:intergenic | 65.0% | |
| TTAGGAGGGGGAGGGAGGGA+GGG | - | Chr3:69642338-69642357 | None:intergenic | 65.0% | |
| TTTAGGAGGGGGAGGGAGGG+AGG | - | Chr3:69642339-69642358 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 69640665 | 69643668 | 69640665 | ID=MsG0380015402.01;Name=MsG0380015402.01 |
| Chr3 | mRNA | 69640665 | 69643668 | 69640665 | ID=MsG0380015402.01.T01;Parent=MsG0380015402.01;Name=MsG0380015402.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.5|0.33|1|1|1|3|406|173 |
| Chr3 | exon | 69640665 | 69640822 | 69640665 | ID=MsG0380015402.01.T01:exon:23519;Parent=MsG0380015402.01.T01 |
| Chr3 | exon | 69640945 | 69641079 | 69640945 | ID=MsG0380015402.01.T01:exon:23520;Parent=MsG0380015402.01.T01 |
| Chr3 | exon | 69643034 | 69643668 | 69643034 | ID=MsG0380015402.01.T01:exon:23521;Parent=MsG0380015402.01.T01 |
| Chr3 | CDS | 69640665 | 69640822 | 69640665 | ID=MsG0380015402.01.T01:cds;Parent=MsG0380015402.01.T01 |
| Chr3 | CDS | 69640945 | 69641079 | 69640945 | ID=MsG0380015402.01.T01:cds;Parent=MsG0380015402.01.T01 |
| Chr3 | CDS | 69643034 | 69643262 | 69643034 | ID=MsG0380015402.01.T01:cds;Parent=MsG0380015402.01.T01 |
| Chr3 | three_prime_UTR | 69643263 | 69643668 | 69643263 | ID=MsG0380015402.01.T01:three_prime_utr;Parent=MsG0380015402.01.T01 |
| Gene Sequence |
| Protein sequence |
