Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015857.01.T01 | XP_013461067.1 | 100 | 203 | 0 | 0 | 28 | 230 | 2 | 204 | 8.72E-144 | 410 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015857.01.T01 | O82528 | 88.177 | 203 | 24 | 0 | 28 | 230 | 2 | 204 | 1.93E-128 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015857.01.T01 | I3T9M3 | 100.000 | 203 | 0 | 0 | 28 | 230 | 2 | 204 | 4.17e-144 | 410 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048040.01 | MsG0380015857.01 | 0.856516 | 3.051106e-62 | 7.302559e-59 |
| MsG0080048922.01 | MsG0380015857.01 | 0.851293 | 9.750721e-61 | 1.964475e-57 |
| MsG0180000096.01 | MsG0380015857.01 | 0.942506 | 6.373051e-102 | 8.029235e-97 |
| MsG0180000118.01 | MsG0380015857.01 | 0.939300 | 1.601141e-99 | 1.630711e-94 |
| MsG0180000698.01 | MsG0380015857.01 | 0.803376 | 3.590465e-49 | 1.801363e-46 |
| MsG0180001169.01 | MsG0380015857.01 | 0.926059 | 7.886279e-91 | 3.641699e-86 |
| MsG0180001829.01 | MsG0380015857.01 | 0.914425 | 1.946476e-84 | 4.831738e-80 |
| MsG0180001837.01 | MsG0380015857.01 | 0.864082 | 1.570356e-64 | 4.869062e-61 |
| MsG0180002738.01 | MsG0380015857.01 | 0.845928 | 2.990054e-59 | 5.062653e-56 |
| MsG0180003258.01 | MsG0380015857.01 | 0.839783 | 1.288641e-57 | 1.798498e-54 |
| MsG0180003585.01 | MsG0380015857.01 | 0.869567 | 2.811202e-66 | 1.059938e-62 |
| MsG0180003897.01 | MsG0380015857.01 | 0.936192 | 2.570642e-97 | 2.162327e-92 |
| MsG0180004064.01 | MsG0380015857.01 | 0.875841 | 2.240781e-68 | 1.062356e-64 |
| MsG0180004503.01 | MsG0380015857.01 | 0.892925 | 1.012364e-74 | 9.443631e-71 |
| MsG0180004829.01 | MsG0380015857.01 | 0.892068 | 2.230467e-74 | 2.006554e-70 |
| MsG0180005321.01 | MsG0380015857.01 | 0.815364 | 9.603557e-52 | 6.607577e-49 |
| MsG0180005384.01 | MsG0380015857.01 | 0.944683 | 1.240932e-103 | 1.802606e-98 |
| MsG0180005573.01 | MsG0380015857.01 | 0.845006 | 5.313931e-59 | 8.734230e-56 |
| MsG0180005789.01 | MsG0380015857.01 | 0.830472 | 2.880932e-55 | 3.038130e-52 |
| MsG0280006301.01 | MsG0380015857.01 | 0.908421 | 1.741412e-81 | 3.229295e-77 |
| MsG0380014507.01 | MsG0380015857.01 | 0.845059 | 5.141985e-59 | 8.465838e-56 |
| MsG0380015402.01 | MsG0380015857.01 | 0.841049 | 6.012836e-58 | 8.728043e-55 |
| MsG0380015446.01 | MsG0380015857.01 | 0.895139 | 1.272770e-75 | 1.303913e-71 |
| MsG0380015766.01 | MsG0380015857.01 | 0.863510 | 2.364439e-64 | 7.185821e-61 |
| MsG0380015857.01 | MsG0380016031.01 | 0.821871 | 3.206013e-53 | 2.640442e-50 |
| MsG0380015857.01 | MsG0380016296.01 | 0.802765 | 4.802564e-49 | 2.372325e-46 |
| MsG0380015857.01 | MsG0380016607.01 | 0.804710 | 1.895721e-49 | 9.843311e-47 |
| MsG0380015857.01 | MsG0380016653.01 | 0.849788 | 2.581739e-60 | 4.950254e-57 |
| MsG0380015857.01 | MsG0380016678.01 | 0.876719 | 1.116210e-68 | 5.467945e-65 |
| MsG0380015857.01 | MsG0380016732.01 | 0.855928 | 4.537821e-62 | 1.064876e-58 |
| MsG0380015857.01 | MsG0380016744.01 | 0.935617 | 6.400913e-97 | 5.209525e-92 |
| MsG0380015857.01 | MsG0380016760.01 | 0.935882 | 4.205047e-97 | 3.472254e-92 |
| MsG0380015857.01 | MsG0380016805.01 | 0.832448 | 9.398343e-56 | 1.050755e-52 |
| MsG0380015857.01 | MsG0380017119.01 | 0.802139 | 6.463417e-49 | 3.142047e-46 |
| MsG0380015857.01 | MsG0380017155.01 | 0.843466 | 1.377377e-58 | 2.156914e-55 |
| MsG0380015857.01 | MsG0380017385.01 | -0.852887 | 3.437692e-61 | 7.290165e-58 |
| MsG0380015857.01 | MsG0380017516.01 | 0.869174 | 3.772887e-66 | 1.402534e-62 |
| MsG0380015857.01 | MsG0380017664.01 | 0.813284 | 2.767130e-51 | 1.799425e-48 |
| MsG0380015857.01 | MsG0380018056.01 | 0.859164 | 4.999022e-63 | 1.307799e-59 |
| MsG0380015857.01 | MsG0480018164.01 | 0.945743 | 1.723700e-104 | 2.695696e-99 |
| MsG0380015857.01 | MsG0480018442.01 | -0.800525 | 1.383764e-48 | 6.457231e-46 |
| MsG0380015857.01 | MsG0480019165.01 | 0.906874 | 9.297247e-81 | 1.606436e-76 |
| MsG0380015857.01 | MsG0480020796.01 | 0.928866 | 1.573765e-92 | 8.516864e-88 |
| MsG0380015857.01 | MsG0480020895.01 | 0.802550 | 5.319930e-49 | 2.613347e-46 |
| MsG0380015857.01 | MsG0480020911.01 | 0.903975 | 1.987844e-79 | 3.009176e-75 |
| MsG0380015857.01 | MsG0480021279.01 | 0.914231 | 2.443193e-84 | 6.007052e-80 |
| MsG0380015857.01 | MsG0480021288.01 | 0.837140 | 6.197170e-57 | 7.976354e-54 |
| MsG0380015857.01 | MsG0480021417.01 | 0.914125 | 2.765033e-84 | 6.765812e-80 |
| MsG0380015857.01 | MsG0480022006.01 | 0.957061 | 6.710408e-115 | 2.268483e-109 |
| MsG0380015857.01 | MsG0480022041.01 | 0.835449 | 1.666869e-56 | 2.038998e-53 |
| MsG0380015857.01 | MsG0480022302.01 | 0.848679 | 5.256748e-60 | 9.723008e-57 |
| MsG0380015857.01 | MsG0480022363.01 | 0.847612 | 1.035803e-59 | 1.851246e-56 |
| MsG0380015857.01 | MsG0480022789.01 | 0.856173 | 3.848812e-62 | 9.104293e-59 |
| MsG0380015857.01 | MsG0480022955.01 | 0.914410 | 1.981295e-84 | 4.915297e-80 |
| MsG0380015857.01 | MsG0480023380.01 | 0.936278 | 2.242707e-97 | 1.897279e-92 |
| MsG0380015857.01 | MsG0480023774.01 | 0.949323 | 1.604784e-107 | 3.161335e-102 |
| MsG0380015857.01 | MsG0480023931.01 | 0.899083 | 2.815823e-77 | 3.426300e-73 |
| MsG0380015857.01 | MsG0480023941.01 | 0.850432 | 1.704722e-60 | 3.338788e-57 |
| MsG0380015857.01 | MsG0480023996.01 | 0.908657 | 1.345836e-81 | 2.522709e-77 |
| MsG0380015857.01 | MsG0580024059.01 | 0.848831 | 4.769267e-60 | 8.865032e-57 |
| MsG0380015857.01 | MsG0580024481.01 | 0.881858 | 1.692153e-70 | 1.007570e-66 |
| MsG0380015857.01 | MsG0580024540.01 | 0.898204 | 6.668227e-77 | 7.803694e-73 |
| MsG0380015857.01 | MsG0580024738.01 | 0.913213 | 7.980926e-84 | 1.867245e-79 |
| MsG0380015857.01 | MsG0580024894.01 | 0.903317 | 3.932372e-79 | 5.791830e-75 |
| MsG0380015857.01 | MsG0580025750.01 | 0.836103 | 1.138653e-56 | 1.420615e-53 |
| MsG0380015857.01 | MsG0580026029.01 | 0.827169 | 1.815248e-54 | 1.738726e-51 |
| MsG0380015857.01 | MsG0580026749.01 | 0.848288 | 6.742405e-60 | 1.231404e-56 |
| MsG0380015857.01 | MsG0580028107.01 | 0.800218 | 1.597488e-48 | 7.396977e-46 |
| MsG0380015857.01 | MsG0580029157.01 | 0.807099 | 5.963621e-50 | 3.292324e-47 |
| MsG0380015857.01 | MsG0580030073.01 | 0.807843 | 4.145924e-50 | 2.333651e-47 |
| MsG0380015857.01 | MsG0680031368.01 | 0.906111 | 2.102179e-80 | 3.508763e-76 |
| MsG0380015857.01 | MsG0680032459.01 | 0.856185 | 3.816247e-62 | 9.031786e-59 |
| MsG0380015857.01 | MsG0680035611.01 | 0.893508 | 5.889550e-75 | 5.625953e-71 |
| MsG0380015857.01 | MsG0680035905.01 | 0.817449 | 3.279384e-52 | 2.389006e-49 |
| MsG0380015857.01 | MsG0780036015.01 | 0.811969 | 5.364916e-51 | 3.368053e-48 |
| MsG0380015857.01 | MsG0780036859.01 | 0.836242 | 1.049798e-56 | 1.315408e-53 |
| MsG0380015857.01 | MsG0780037290.01 | 0.828939 | 6.800874e-55 | 6.858617e-52 |
| MsG0380015857.01 | MsG0780038383.01 | 0.874236 | 7.909204e-68 | 3.533664e-64 |
| MsG0380015857.01 | MsG0780039937.01 | 0.907315 | 5.785240e-81 | 1.021046e-76 |
| MsG0380015857.01 | MsG0780040174.01 | 0.842088 | 3.201034e-58 | 4.800379e-55 |
| MsG0380015857.01 | MsG0780041240.01 | 0.869787 | 2.382526e-66 | 9.051978e-63 |
| MsG0380015857.01 | MsG0780041311.01 | 0.894156 | 3.212137e-75 | 3.156090e-71 |
| MsG0380015857.01 | MsG0780041460.01 | -0.800197 | 1.613393e-48 | 7.466385e-46 |
| MsG0380015857.01 | MsG0780041522.01 | 0.892020 | 2.330673e-74 | 2.092437e-70 |
| MsG0380015857.01 | MsG0780041790.01 | 0.901152 | 3.578067e-78 | 4.772072e-74 |
| MsG0380015857.01 | MsG0880041941.01 | 0.877651 | 5.295161e-69 | 2.683491e-65 |
| MsG0380015857.01 | MsG0880042517.01 | 0.886149 | 4.396894e-72 | 3.104138e-68 |
| MsG0380015857.01 | MsG0880042896.01 | 0.836782 | 7.647853e-57 | 9.738484e-54 |
| MsG0380015857.01 | MsG0880043076.01 | 0.900764 | 5.286036e-78 | 6.929544e-74 |
| MsG0380015857.01 | MsG0880044204.01 | 0.892014 | 2.343581e-74 | 2.103331e-70 |
| MsG0380015857.01 | MsG0880045761.01 | -0.819904 | 9.089210e-53 | 7.086199e-50 |
| MsG0380015857.01 | MsG0880045836.01 | 0.890933 | 6.290073e-74 | 5.400561e-70 |
| MsG0380015857.01 | MsG0880046220.01 | 0.854383 | 1.276908e-61 | 2.846398e-58 |
| MsG0380015857.01 | MsG0880046486.01 | 0.873394 | 1.520930e-67 | 6.590162e-64 |
| MsG0380015857.01 | MsG0880047090.01 | 0.855407 | 6.442187e-62 | 1.485902e-58 |
| MsG0380015857.01 | MsG0880047310.01 | 0.857832 | 1.247100e-62 | 3.118967e-59 |
| MsG0280006629.01 | MsG0380015857.01 | 0.890766 | 7.320535e-74 | 6.242334e-70 |
| MsG0280006717.01 | MsG0380015857.01 | 0.822855 | 1.894777e-53 | 1.604876e-50 |
| MsG0280006747.01 | MsG0380015857.01 | 0.942947 | 2.907519e-102 | 3.775041e-97 |
| MsG0280006760.01 | MsG0380015857.01 | 0.831448 | 1.659692e-55 | 1.801675e-52 |
| MsG0280007055.01 | MsG0380015857.01 | 0.963732 | 1.902733e-122 | 1.062884e-116 |
| MsG0280007084.01 | MsG0380015857.01 | 0.875998 | 1.980269e-68 | 9.444258e-65 |
| MsG0280007606.01 | MsG0380015857.01 | 0.863433 | 2.497737e-64 | 7.569813e-61 |
| MsG0280007995.01 | MsG0380015857.01 | 0.862748 | 4.067447e-64 | 1.204265e-60 |
| MsG0280008263.01 | MsG0380015857.01 | 0.813652 | 2.296656e-51 | 1.508574e-48 |
| MsG0280010203.01 | MsG0380015857.01 | 0.819818 | 9.509636e-53 | 7.396213e-50 |
| MsG0280010232.01 | MsG0380015857.01 | 0.828661 | 7.941583e-55 | 7.944919e-52 |
| MsG0280010519.01 | MsG0380015857.01 | 0.844883 | 5.737555e-59 | 9.392958e-56 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0380015857.01 | MsG0880046760.01 | PPI |
| MsG0280009166.01 | MsG0380015857.01 | PPI |
| MsG0380015857.01 | MsG0280006747.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015857.01.T01 | MTR_3g078653 | 100.000 | 203 | 0 | 0 | 28 | 230 | 2 | 204 | 1.06e-147 | 410 |
| MsG0380015857.01.T01 | MTR_2g014220 | 99.507 | 203 | 1 | 0 | 28 | 230 | 50 | 252 | 3.20e-147 | 410 |
| MsG0380015857.01.T01 | MTR_7g026915 | 94.828 | 58 | 3 | 0 | 28 | 85 | 2 | 59 | 2.70e-32 | 124 |
| MsG0380015857.01.T01 | MTR_7g026915 | 87.302 | 63 | 8 | 0 | 28 | 90 | 2 | 64 | 2.97e-30 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015857.01.T01 | AT4G16720 | 88.177 | 203 | 24 | 0 | 28 | 230 | 2 | 204 | 1.73e-119 | 338 |
| MsG0380015857.01.T01 | AT4G17390 | 87.685 | 203 | 25 | 0 | 28 | 230 | 2 | 204 | 3.86e-119 | 338 |
Find 111 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGCATTATATCTAGATTT+TGG | 0.161408 | 3:-75912120 | MsG0380015857.01.T01:three_prime_UTR |
| AACCCGTTGGGGACGGGGTT+GGG | 0.198620 | 3:-75914446 | MsG0380015857.01.T01:CDS |
| CAAATATTTCGAGGTCATTT+TGG | 0.206004 | 3:-75912398 | MsG0380015857.01.T01:CDS |
| GTTTCCAAGGGTATTGTTTA+TGG | 0.211521 | 3:-75912648 | MsG0380015857.01.T01:CDS |
| TCCTGACAAGGCTCGTCGTT+TGG | 0.263036 | 3:-75913600 | MsG0380015857.01.T01:CDS |
| ACCCGTTGGGGACGGGGTTG+GGG | 0.265592 | 3:-75914445 | MsG0380015857.01.T01:CDS |
| AACAACCAAAACGAGTTTCT+AGG | 0.272413 | 3:+75912055 | None:intergenic |
| GACGGAAGCTTGGTGGTCTT+AGG | 0.284899 | 3:-75912551 | MsG0380015857.01.T01:CDS |
| AACCCCGTCCCCAACGGGTT+CGG | 0.296733 | 3:+75914449 | None:intergenic |
| TTGGTGAGCCAGTTGATTCT+TGG | 0.307622 | 3:+75912343 | None:intergenic |
| CGGGGATACCCGAACCCGTT+GGG | 0.325029 | 3:-75914458 | MsG0380015857.01.T01:CDS |
| ACCCCGTCCCCAACGGGTTC+GGG | 0.325911 | 3:+75914450 | None:intergenic |
| AGTTCCCTGTGCTTGTGGAC+TGG | 0.331698 | 3:+75912319 | None:intergenic |
| GTTCCCTGTGCTTGTGGACT+GGG | 0.349720 | 3:+75912320 | None:intergenic |
| TACCCGAACCCGTTGGGGAC+GGG | 0.362661 | 3:-75914452 | MsG0380015857.01.T01:CDS |
| TTAGGGTTCTCAATTCCTAC+TGG | 0.365103 | 3:-75912533 | MsG0380015857.01.T01:CDS |
| TCATGCAGCGTGTGAGGTGC+TGG | 0.369307 | 3:-75913670 | MsG0380015857.01.T01:CDS |
| TGGTGAGCCAGTTGATTCTT+GGG | 0.374689 | 3:+75912344 | None:intergenic |
| TTGTGGGGACGGGGATGTGG+CGG | 0.374720 | 3:-75914478 | None:intergenic |
| ACCCGAACCCGTTGGGGACG+GGG | 0.375448 | 3:-75914451 | MsG0380015857.01.T01:CDS |
| TAAACAATACCCTTGGAAAC+TGG | 0.377401 | 3:+75912651 | None:intergenic |
| GTCCATCCCGCAGGGCAAAC+TGG | 0.385467 | 3:-75912225 | MsG0380015857.01.T01:CDS |
| TCTCTTCCAGTTTGCCCTGC+GGG | 0.386069 | 3:+75912219 | None:intergenic |
| CCTGACAAGGCTCGTCGTTT+GGG | 0.387512 | 3:-75913599 | MsG0380015857.01.T01:CDS |
| TGTGGGGACGGGGATGTGGC+GGG | 0.390475 | 3:-75914477 | None:intergenic |
| CATTGCCTAGAAACTCGTTT+TGG | 0.398184 | 3:-75912060 | MsG0380015857.01.T01:three_prime_UTR |
| TGCGGGATGGACGGGCTTTG+TGG | 0.407354 | 3:+75912236 | None:intergenic |
| TGCTCCTTTGAAACTTGAGT+TGG | 0.414015 | 3:+75912601 | None:intergenic |
| GAACCCGTTGGGGACGGGGT+TGG | 0.415067 | 3:-75914447 | MsG0380015857.01.T01:CDS |
| AACGGTAACGGCGGAGAGAC+AGG | 0.416120 | 3:+75912188 | None:intergenic |
| GTTTGCCCTGCGGGATGGAC+GGG | 0.417367 | 3:+75912228 | None:intergenic |
| TAGCTCAGAAACATACTTGT+AGG | 0.420670 | 3:+75913724 | None:intergenic |
| TTCAGGGATATGTCGTGTAC+CGG | 0.425049 | 3:-75912704 | MsG0380015857.01.T01:intron |
| TGGGTAACTCCCTGGTTGGT+GGG | 0.428376 | 3:+75912621 | None:intergenic |
| GGCTCGTCGTTTGGGTTACA+AGG | 0.429123 | 3:-75913591 | MsG0380015857.01.T01:CDS |
| AGTTTGCCCTGCGGGATGGA+CGG | 0.430262 | 3:+75912227 | None:intergenic |
| TTGGGTATGGGTAGGGTAAC+GGG | 0.433745 | 3:-75914404 | MsG0380015857.01.T01:intron |
| CCCAAACGACGAGCCTTGTC+AGG | 0.435846 | 3:+75913599 | None:intergenic |
| ACCCCAACCCCGTCCCCAAC+GGG | 0.440202 | 3:+75914444 | None:intergenic |
| AATGACCTCGAAATATTTGA+AGG | 0.445755 | 3:+75912402 | None:intergenic |
| GTGGGGACGGGGATGTGGCG+GGG | 0.447199 | 3:-75914476 | None:intergenic |
| CTTCGTGGTCTCACTTCTGC+TGG | 0.448020 | 3:-75912298 | MsG0380015857.01.T01:CDS |
| TTACCCTACCCATACCCAAC+GGG | 0.448493 | 3:+75914408 | None:intergenic |
| CTTGTCAGGACGAGTGGGTC+TGG | 0.448800 | 3:+75913613 | None:intergenic |
| ACGGAAGCTTGGTGGTCTTA+GGG | 0.449544 | 3:-75912550 | MsG0380015857.01.T01:CDS |
| TTCCAGTTTGCCCTGCGGGA+TGG | 0.461159 | 3:+75912223 | None:intergenic |
| CACGAAGTTCCCTGTGCTTG+TGG | 0.463265 | 3:+75912314 | None:intergenic |
| TCTGCTGGAAAAGAAAATAG+AGG | 0.467062 | 3:-75912283 | MsG0380015857.01.T01:CDS |
| ATGGACGGGCTTTGTGGTAA+CGG | 0.472327 | 3:+75912242 | None:intergenic |
| CATCCCCGTTGGGTATGGGT+AGG | 0.476643 | 3:-75914412 | MsG0380015857.01.T01:CDS |
| TTGGGTAACTCCCTGGTTGG+TGG | 0.476932 | 3:+75912620 | None:intergenic |
| GCTCCTTTGAAACTTGAGTT+GGG | 0.480540 | 3:+75912602 | None:intergenic |
| GTTGGGTATGGGTAGGGTAA+CGG | 0.481814 | 3:-75914405 | MsG0380015857.01.T01:CDS |
| ATACCCGAACCCGTTGGGGA+CGG | 0.482857 | 3:-75914453 | MsG0380015857.01.T01:CDS |
| TTCTACCTTCAAATATTTCG+AGG | 0.494616 | 3:-75912407 | MsG0380015857.01.T01:CDS |
| CCAACCCAGTCCACAAGCAC+AGG | 0.501162 | 3:-75912324 | MsG0380015857.01.T01:CDS |
| CGTGCTGGACGGAAGCTTGG+TGG | 0.501934 | 3:-75912558 | MsG0380015857.01.T01:CDS |
| TACGCAGAGGTGGTAGGAAG+AGG | 0.502186 | 3:-75912674 | MsG0380015857.01.T01:CDS |
| TTTGGGTTACAAGGCTAAGC+AGG | 0.502645 | 3:-75913582 | MsG0380015857.01.T01:intron |
| ACAAAGCCCGTCCATCCCGC+AGG | 0.505243 | 3:-75912234 | MsG0380015857.01.T01:CDS |
| ACAAGTATGTTTCTGAGCTA+TGG | 0.512701 | 3:-75913721 | MsG0380015857.01.T01:CDS |
| GCGGGGATACCCGAACCCGT+TGG | 0.513675 | 3:-75914459 | MsG0380015857.01.T01:CDS |
| ATCCCCGTTGGGTATGGGTA+GGG | 0.518500 | 3:-75914411 | MsG0380015857.01.T01:CDS |
| AACCCCAACCCCGTCCCCAA+CGG | 0.520408 | 3:+75914443 | None:intergenic |
| GAGCGTGCTGGACGGAAGCT+TGG | 0.530059 | 3:-75912561 | MsG0380015857.01.T01:CDS |
| CTTACCATAAACAATACCCT+TGG | 0.531543 | 3:+75912644 | None:intergenic |
| CCTGTGCTTGTGGACTGGGT+TGG | 0.541785 | 3:+75912324 | None:intergenic |
| TAGGAAGAGGCCAGTTTCCA+AGG | 0.541808 | 3:-75912661 | MsG0380015857.01.T01:CDS |
| GATATGTCGTGTACCGGGTG+AGG | 0.542902 | 3:-75912698 | MsG0380015857.01.T01:CDS |
| GAAATGACCCAAGAATCAAC+TGG | 0.550461 | 3:-75912351 | MsG0380015857.01.T01:CDS |
| TTATGGTAAGCCCACCAACC+AGG | 0.550892 | 3:-75912631 | MsG0380015857.01.T01:CDS |
| TGAGGGTACGCAGAGGTGGT+AGG | 0.551486 | 3:-75912680 | MsG0380015857.01.T01:CDS |
| ACTTGAGTTGGGTAACTCCC+TGG | 0.551881 | 3:+75912613 | None:intergenic |
| TCCGTCGCTGAAGAGCGTGC+TGG | 0.554588 | 3:-75912573 | MsG0380015857.01.T01:CDS |
| TAGGGTTCTCAATTCCTACT+GGG | 0.560974 | 3:-75912532 | MsG0380015857.01.T01:CDS |
| CAATTCCTACTGGGTCAATG+AGG | 0.563819 | 3:-75912523 | MsG0380015857.01.T01:intron |
| GGGGATACCCGAACCCGTTG+GGG | 0.567942 | 3:-75914457 | MsG0380015857.01.T01:CDS |
| TCAGGGATATGTCGTGTACC+GGG | 0.568572 | 3:-75912703 | MsG0380015857.01.T01:intron |
| CACCTCTGCGTACCCTCACC+CGG | 0.571516 | 3:+75912685 | None:intergenic |
| ACGAGCCTTGTCAGGACGAG+TGG | 0.572806 | 3:+75913607 | None:intergenic |
| TTACCCAACTCAAGTTTCAA+AGG | 0.573525 | 3:-75912605 | MsG0380015857.01.T01:CDS |
| CATGCAGCGTGTGAGGTGCT+GGG | 0.579531 | 3:-75913669 | MsG0380015857.01.T01:CDS |
| AAATAACAAATGATCAAACA+AGG | 0.582529 | 3:+75912016 | None:intergenic |
| AATAGAGGTTTGAGTGGCAA+GGG | 0.585122 | 3:-75912268 | MsG0380015857.01.T01:CDS |
| TCCAGCACGCTCTTCAGCGA+CGG | 0.585150 | 3:+75912572 | None:intergenic |
| TTCTCTTCCAGTTTGCCCTG+CGG | 0.587901 | 3:+75912218 | None:intergenic |
| AAATAGAGGTTTGAGTGGCA+AGG | 0.588102 | 3:-75912269 | MsG0380015857.01.T01:CDS |
| TCGCTGAAGAGCGTGCTGGA+CGG | 0.595062 | 3:-75912569 | MsG0380015857.01.T01:CDS |
| AAAGAAAATAGAGGTTTGAG+TGG | 0.595531 | 3:-75912274 | MsG0380015857.01.T01:CDS |
| TCAAGTTTCAAAGGAGCAAG+AGG | 0.596680 | 3:-75912596 | MsG0380015857.01.T01:CDS |
| CACAAGCACAGGGAACTTCG+TGG | 0.600876 | 3:-75912313 | MsG0380015857.01.T01:CDS |
| TGCGATTCATGCAGCGTGTG+AGG | 0.602561 | 3:-75913676 | MsG0380015857.01.T01:CDS |
| CAGACCCACTCGTCCTGACA+AGG | 0.605906 | 3:-75913612 | MsG0380015857.01.T01:CDS |
| TATGGTAAGCCCACCAACCA+GGG | 0.605988 | 3:-75912630 | MsG0380015857.01.T01:CDS |
| GAGTTTCTAGGCAATGTCAC+AGG | 0.607208 | 3:+75912067 | None:intergenic |
| CGGGTGAGGGTACGCAGAGG+TGG | 0.609715 | 3:-75912684 | MsG0380015857.01.T01:CDS |
| TGCAGTAAAATCAACGGTAA+CGG | 0.618711 | 3:+75912176 | None:intergenic |
| CAAAGCCCGTCCATCCCGCA+GGG | 0.619537 | 3:-75912233 | MsG0380015857.01.T01:CDS |
| GAGTTGGGTAACTCCCTGGT+TGG | 0.627619 | 3:+75912617 | None:intergenic |
| AGGAAGAGGCCAGTTTCCAA+GGG | 0.629174 | 3:-75912660 | MsG0380015857.01.T01:CDS |
| AATAACTGCAGTAAAATCAA+CGG | 0.631423 | 3:+75912170 | None:intergenic |
| CAACCCAGTCCACAAGCACA+GGG | 0.632139 | 3:-75912323 | MsG0380015857.01.T01:CDS |
| ATATGTCGTGTACCGGGTGA+GGG | 0.637020 | 3:-75912697 | MsG0380015857.01.T01:CDS |
| ACGGTAACGGCGGAGAGACA+GGG | 0.637745 | 3:+75912189 | None:intergenic |
| ACAAACCTCATTGACCCAGT+AGG | 0.645250 | 3:+75912518 | None:intergenic |
| GTTACCCTACCCATACCCAA+CGG | 0.659888 | 3:+75914407 | None:intergenic |
| AATAACAAATGATCAAACAA+GGG | 0.663287 | 3:+75912017 | None:intergenic |
| AGTAAAATCAACGGTAACGG+CGG | 0.665793 | 3:+75912179 | None:intergenic |
| CGAGCCTTGTCAGGACGAGT+GGG | 0.689280 | 3:+75913608 | None:intergenic |
| TACCGGGTGAGGGTACGCAG+AGG | 0.698900 | 3:-75912687 | MsG0380015857.01.T01:CDS |
| TACCCTACCCATACCCAACG+GGG | 0.727048 | 3:+75914409 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATATATTATTTCGTATT+GGG | + | Chr3:75912452-75912471 | None:intergenic | 10.0% |
| !!! | AATAAGTCATTTTTTTAAAA+TGG | - | Chr3:75913048-75913067 | MsG0380015857.01.T01:intron | 10.0% |
| !!! | ATAAGTCATTTTTTTAAAAT+GGG | - | Chr3:75913049-75913068 | MsG0380015857.01.T01:intron | 10.0% |
| !!! | TAAGTTTTAATATTATGTTT+TGG | - | Chr3:75914395-75914414 | MsG0380015857.01.T01:intron | 10.0% |
| !! | AAATTTCATATTCATATAGA+AGG | - | Chr3:75913210-75913229 | MsG0380015857.01.T01:intron | 15.0% |
| !! | ATCAAACATTAACAAAAATT+TGG | + | Chr3:75913315-75913334 | None:intergenic | 15.0% |
| !! | GTTTATATATTATTTCGTAT+TGG | + | Chr3:75912453-75912472 | None:intergenic | 15.0% |
| !!! | GTTTGTATTTTTATTTTTAC+TGG | - | Chr3:75913447-75913466 | MsG0380015857.01.T01:intron | 15.0% |
| !!! | TACTAAGAATTAATCTTTTA+GGG | - | Chr3:75912943-75912962 | MsG0380015857.01.T01:intron | 15.0% |
| !!! | TTACTAAGAATTAATCTTTT+AGG | - | Chr3:75912942-75912961 | MsG0380015857.01.T01:intron | 15.0% |
| !! | AAATAACAAATGATCAAACA+AGG | + | Chr3:75914366-75914385 | None:intergenic | 20.0% |
| !! | AATAACAAATGATCAAACAA+GGG | + | Chr3:75914365-75914384 | None:intergenic | 20.0% |
| !! | ATATGAAGGAAATAGAATTT+GGG | - | Chr3:75912399-75912418 | MsG0380015857.01.T01:CDS | 20.0% |
| !!! | AAACTTTTTTTTTTCTGTTG+AGG | + | Chr3:75912327-75912346 | None:intergenic | 20.0% |
| !!! | AAAGTTTTCAAATAGCAAAT+AGG | - | Chr3:75912340-75912359 | MsG0380015857.01.T01:CDS | 20.0% |
| !!! | AACTTTTTTTTTTCTGTTGA+GGG | + | Chr3:75912326-75912345 | None:intergenic | 20.0% |
| !!! | TTTTTAAAATGGGTTTCAAA+TGG | - | Chr3:75913059-75913078 | MsG0380015857.01.T01:intron | 20.0% |
| ! | AATAACTGCAGTAAAATCAA+CGG | + | Chr3:75914212-75914231 | None:intergenic | 25.0% |
| ! | CAAATCAAAACAAAAAAGGA+AGG | + | Chr3:75914431-75914450 | None:intergenic | 25.0% |
| ! | GATATGAAGGAAATAGAATT+TGG | - | Chr3:75912398-75912417 | MsG0380015857.01.T01:CDS | 25.0% |
| ! | GTGTCAAATCAAAACAAAAA+AGG | + | Chr3:75914435-75914454 | None:intergenic | 25.0% |
| !! | ACAAAAAATTGATAGTCTCT+AGG | + | Chr3:75913279-75913298 | None:intergenic | 25.0% |
| !! | AGTGCATTATATCTAGATTT+TGG | - | Chr3:75914259-75914278 | MsG0380015857.01.T01:intron | 25.0% |
| !! | CTCTATTACTGCAAATTTTT+GGG | - | Chr3:75914461-75914480 | MsG0380015857.01.T01:CDS | 25.0% |
| !! | TCTCTATTACTGCAAATTTT+TGG | - | Chr3:75914460-75914479 | MsG0380015857.01.T01:CDS | 25.0% |
| !! | TCTTGTTTGTGATATATTGT+TGG | - | Chr3:75912085-75912104 | MsG0380015857.01.T01:three_prime_UTR | 25.0% |
| !! | TTTTCAAATAGCAAATAGGT+AGG | - | Chr3:75912344-75912363 | MsG0380015857.01.T01:CDS | 25.0% |
| !!! | ACTTTTTTTTTTCTGTTGAG+GGG | + | Chr3:75912325-75912344 | None:intergenic | 25.0% |
| !!! | GCAAATCACAAATTTTAGTA+AGG | + | Chr3:75913501-75913520 | None:intergenic | 25.0% |
| !!! | GCAATTGACAAATTTTAGTA+AGG | + | Chr3:75913562-75913581 | None:intergenic | 25.0% |
| !!! | TAGAGACTATCAATTTTTTG+TGG | - | Chr3:75913278-75913297 | MsG0380015857.01.T01:intron | 25.0% |
| !!! | TGTTGTTGTTATTTGTGAAT+AGG | - | Chr3:75912630-75912649 | MsG0380015857.01.T01:CDS | 25.0% |
| AAAGAAAATAGAGGTTTGAG+TGG | - | Chr3:75914105-75914124 | MsG0380015857.01.T01:intron | 30.0% | |
| AATGACCTCGAAATATTTGA+AGG | + | Chr3:75913980-75913999 | None:intergenic | 30.0% | |
| ATCAAAACAAAAAAGGAAGG+CGG | + | Chr3:75914428-75914447 | None:intergenic | 30.0% | |
| ATCATACAGAAACAAAAGCA+TGG | + | Chr3:75912582-75912601 | None:intergenic | 30.0% | |
| CATGTTTACAAAATGAAGCA+AGG | + | Chr3:75913628-75913647 | None:intergenic | 30.0% | |
| GAACTAGTTGAAGTTCAATT+TGG | - | Chr3:75913894-75913913 | MsG0380015857.01.T01:intron | 30.0% | |
| GTAAACAGATTCAGATATGA+AGG | - | Chr3:75912385-75912404 | MsG0380015857.01.T01:CDS | 30.0% | |
| GTAGCACAAAACAAAACAAT+GGG | + | Chr3:75913948-75913967 | None:intergenic | 30.0% | |
| TAGCACAAAACAAAACAATG+GGG | + | Chr3:75913947-75913966 | None:intergenic | 30.0% | |
| TATTCTACTAGTTAACACCT+GGG | - | Chr3:75913116-75913135 | MsG0380015857.01.T01:intron | 30.0% | |
| TGTAGCACAAAACAAAACAA+TGG | + | Chr3:75913949-75913968 | None:intergenic | 30.0% | |
| TGTTCTAGTAAAACTAGACA+TGG | + | Chr3:75912065-75912084 | None:intergenic | 30.0% | |
| TTCTACCTTCAAATATTTCG+AGG | - | Chr3:75913972-75913991 | MsG0380015857.01.T01:intron | 30.0% | |
| ! | CAAATATTTCGAGGTCATTT+TGG | - | Chr3:75913981-75914000 | MsG0380015857.01.T01:intron | 30.0% |
| ! | GTAATTGTCACATCTTTTCA+GGG | - | Chr3:75913659-75913678 | MsG0380015857.01.T01:CDS | 30.0% |
| ! | TGTAATTGTCACATCTTTTC+AGG | - | Chr3:75913658-75913677 | MsG0380015857.01.T01:CDS | 30.0% |
| !! | CTATATAGTTGTTGATTCTC+TGG | - | Chr3:75912871-75912890 | MsG0380015857.01.T01:intron | 30.0% |
| !!! | ATTGTTTTGTTTTGTGCTAC+AGG | - | Chr3:75913948-75913967 | MsG0380015857.01.T01:intron | 30.0% |
| AACAACCAAAACGAGTTTCT+AGG | + | Chr3:75914327-75914346 | None:intergenic | 35.0% | |
| AAGTATATGACAATCGGGTA+TGG | - | Chr3:75911999-75912018 | MsG0380015857.01.T01:three_prime_UTR | 35.0% | |
| ACAAAACAAAACAATGGGGT+TGG | + | Chr3:75913943-75913962 | None:intergenic | 35.0% | |
| ACGGGTAAGTATATGACAAT+CGG | - | Chr3:75911993-75912012 | MsG0380015857.01.T01:three_prime_UTR | 35.0% | |
| AGTAAAACTAGACATGGCAA+TGG | + | Chr3:75912059-75912078 | None:intergenic | 35.0% | |
| AGTATATGACAATCGGGTAT+GGG | - | Chr3:75912000-75912019 | MsG0380015857.01.T01:three_prime_UTR | 35.0% | |
| ATGGAGAATTGAAGAGTAGA+TGG | + | Chr3:75912563-75912582 | None:intergenic | 35.0% | |
| ATTTCGTATTGGGCCAAAAT+GGG | + | Chr3:75912442-75912461 | None:intergenic | 35.0% | |
| CACAATGTGTTATGTCTTGT+TGG | - | Chr3:75913400-75913419 | MsG0380015857.01.T01:intron | 35.0% | |
| CAGGTGTTAACTAGTAGAAT+AGG | + | Chr3:75913117-75913136 | None:intergenic | 35.0% | |
| CTATTCTACTAGTTAACACC+TGG | - | Chr3:75913115-75913134 | MsG0380015857.01.T01:intron | 35.0% | |
| CTTACCATAAACAATACCCT+TGG | + | Chr3:75913738-75913757 | None:intergenic | 35.0% | |
| GTAAAACTAGACATGGCAAT+GGG | + | Chr3:75912058-75912077 | None:intergenic | 35.0% | |
| TAAAACTAGACATGGCAATG+GGG | + | Chr3:75912057-75912076 | None:intergenic | 35.0% | |
| TAAACAATACCCTTGGAAAC+TGG | + | Chr3:75913731-75913750 | None:intergenic | 35.0% | |
| TAGCTCAGAAACATACTTGT+AGG | + | Chr3:75912658-75912677 | None:intergenic | 35.0% | |
| TATTTCGTATTGGGCCAAAA+TGG | + | Chr3:75912443-75912462 | None:intergenic | 35.0% | |
| TCAAAGACAAACCGAGAAAT+GGG | - | Chr3:75912530-75912549 | MsG0380015857.01.T01:CDS | 35.0% | |
| TCTGCTGGAAAAGAAAATAG+AGG | - | Chr3:75914096-75914115 | MsG0380015857.01.T01:intron | 35.0% | |
| TGCAGTAAAATCAACGGTAA+CGG | + | Chr3:75914206-75914225 | None:intergenic | 35.0% | |
| TTACCCAACTCAAGTTTCAA+AGG | - | Chr3:75913774-75913793 | MsG0380015857.01.T01:intron | 35.0% | |
| TTCAAAGACAAACCGAGAAA+TGG | - | Chr3:75912529-75912548 | MsG0380015857.01.T01:CDS | 35.0% | |
| ! | ACAAGTATGTTTCTGAGCTA+TGG | - | Chr3:75912658-75912677 | MsG0380015857.01.T01:CDS | 35.0% |
| ! | GTCTTTGAATGATGGAGATT+AGG | + | Chr3:75912518-75912537 | None:intergenic | 35.0% |
| ! | TAAGGTTTAGGGTTTGAGAA+TGG | + | Chr3:75912481-75912500 | None:intergenic | 35.0% |
| ! | TTCAATTTTTCATCCCCGTT+GGG | - | Chr3:75911957-75911976 | MsG0380015857.01.T01:three_prime_UTR | 35.0% |
| ! | TTTTCTGTTGAGGGGAAAAA+TGG | + | Chr3:75912317-75912336 | None:intergenic | 35.0% |
| !! | GTTTCCAAGGGTATTGTTTA+TGG | - | Chr3:75913731-75913750 | MsG0380015857.01.T01:intron | 35.0% |
| !!! | TTTTGTGTTGCTTCGTTTTC+TGG | - | Chr3:75914230-75914249 | MsG0380015857.01.T01:intron | 35.0% |
| AAATAGAGGTTTGAGTGGCA+AGG | - | Chr3:75914110-75914129 | MsG0380015857.01.T01:intron | 40.0% | |
| AATAGAGGTTTGAGTGGCAA+GGG | - | Chr3:75914111-75914130 | MsG0380015857.01.T01:intron | 40.0% | |
| AGCAAACCCAGTAAGGTTTA+GGG | + | Chr3:75912492-75912511 | None:intergenic | 40.0% | |
| ATGGATGCATACCCATTTCT+CGG | + | Chr3:75912544-75912563 | None:intergenic | 40.0% | |
| CGGGTAAGTATATGACAATC+GGG | - | Chr3:75911994-75912013 | MsG0380015857.01.T01:three_prime_UTR | 40.0% | |
| CTCAAACCCTAAACCTTACT+GGG | - | Chr3:75912483-75912502 | MsG0380015857.01.T01:intron | 40.0% | |
| GAAATGACCCAAGAATCAAC+TGG | - | Chr3:75914028-75914047 | MsG0380015857.01.T01:intron | 40.0% | |
| GTATATGACAATCGGGTATG+GGG | - | Chr3:75912001-75912020 | MsG0380015857.01.T01:three_prime_UTR | 40.0% | |
| TAGGGTTCTCAATTCCTACT+GGG | - | Chr3:75913847-75913866 | MsG0380015857.01.T01:intron | 40.0% | |
| TCAAGTTTCAAAGGAGCAAG+AGG | - | Chr3:75913783-75913802 | MsG0380015857.01.T01:intron | 40.0% | |
| TCAATTTGGTTGTGATGTGC+TGG | - | Chr3:75913908-75913927 | MsG0380015857.01.T01:intron | 40.0% | |
| TCTCAAACCCTAAACCTTAC+TGG | - | Chr3:75912482-75912501 | MsG0380015857.01.T01:intron | 40.0% | |
| TTAGGGTTCTCAATTCCTAC+TGG | - | Chr3:75913846-75913865 | MsG0380015857.01.T01:intron | 40.0% | |
| ! | AGTAAAATCAACGGTAACGG+CGG | + | Chr3:75914203-75914222 | None:intergenic | 40.0% |
| ! | CATTGCCTAGAAACTCGTTT+TGG | - | Chr3:75914319-75914338 | MsG0380015857.01.T01:intron | 40.0% |
| ! | CTCGGTTTGTCTTTGAATGA+TGG | + | Chr3:75912526-75912545 | None:intergenic | 40.0% |
| ! | GTTCAATTTTTCATCCCCGT+TGG | - | Chr3:75911956-75911975 | MsG0380015857.01.T01:three_prime_UTR | 40.0% |
| !! | GCTCCTTTGAAACTTGAGTT+GGG | + | Chr3:75913780-75913799 | None:intergenic | 40.0% |
| !! | TGCTCCTTTGAAACTTGAGT+TGG | + | Chr3:75913781-75913800 | None:intergenic | 40.0% |
| ACAAACCTCATTGACCCAGT+AGG | + | Chr3:75913864-75913883 | None:intergenic | 45.0% | |
| ATAGTCTCTAGGCCTGTACA+TGG | + | Chr3:75913268-75913287 | None:intergenic | 45.0% | |
| CAATTCCTACTGGGTCAATG+AGG | - | Chr3:75913856-75913875 | MsG0380015857.01.T01:intron | 45.0% | |
| CAGCAAACCCAGTAAGGTTT+AGG | + | Chr3:75912493-75912512 | None:intergenic | 45.0% | |
| CATTGCTCAAGACCATGTAC+AGG | - | Chr3:75913253-75913272 | MsG0380015857.01.T01:intron | 45.0% | |
| CTACTAGTTAACACCTGGGT+GGG | - | Chr3:75913120-75913139 | MsG0380015857.01.T01:intron | 45.0% | |
| GGGGCAGGAGTTACAATAAT+TGG | - | Chr3:75913140-75913159 | MsG0380015857.01.T01:intron | 45.0% | |
| GGTCTTGAGCAATGGTTCAA+AGG | + | Chr3:75913247-75913266 | None:intergenic | 45.0% | |
| TACTAGTTAACACCTGGGTG+GGG | - | Chr3:75913121-75913140 | MsG0380015857.01.T01:intron | 45.0% | |
| TCTACTAGTTAACACCTGGG+TGG | - | Chr3:75913119-75913138 | MsG0380015857.01.T01:intron | 45.0% | |
| TTCAGGGATATGTCGTGTAC+CGG | - | Chr3:75913675-75913694 | MsG0380015857.01.T01:CDS | 45.0% | |
| ! | CCAAAATGGGCTTTCATCTC+GGG | + | Chr3:75912429-75912448 | None:intergenic | 45.0% |
| ! | CCACAAACAGCAGATTAGTC+TGG | + | Chr3:75913339-75913358 | None:intergenic | 45.0% |
| ! | CCAGACTAATCTGCTGTTTG+TGG | - | Chr3:75913336-75913355 | MsG0380015857.01.T01:intron | 45.0% |
| ! | CTGTACATGGTCTTGAGCAA+TGG | + | Chr3:75913255-75913274 | None:intergenic | 45.0% |
| ! | GAGTTTCTAGGCAATGTCAC+AGG | + | Chr3:75914315-75914334 | None:intergenic | 45.0% |
| ! | GCCAAAATGGGCTTTCATCT+CGG | + | Chr3:75912430-75912449 | None:intergenic | 45.0% |
| ! | GGTTTAGGGTTTGAGAATGG+AGG | + | Chr3:75912478-75912497 | None:intergenic | 45.0% |
| ! | TGGTGAGCCAGTTGATTCTT+GGG | + | Chr3:75914038-75914057 | None:intergenic | 45.0% |
| ! | TTGGTGAGCCAGTTGATTCT+TGG | + | Chr3:75914039-75914058 | None:intergenic | 45.0% |
| ! | TTTGGGTTACAAGGCTAAGC+AGG | - | Chr3:75912797-75912816 | MsG0380015857.01.T01:intron | 45.0% |
| ! | TTTTCATCCCCGTTGGGTAT+GGG | - | Chr3:75911963-75911982 | MsG0380015857.01.T01:three_prime_UTR | 45.0% |
| ! | TTTTTCATCCCCGTTGGGTA+TGG | - | Chr3:75911962-75911981 | MsG0380015857.01.T01:three_prime_UTR | 45.0% |
| AACTAGACATGGCAATGGGG+CGG | + | Chr3:75912054-75912073 | None:intergenic | 50.0% | |
| AGGAAGAGGCCAGTTTCCAA+GGG | - | Chr3:75913719-75913738 | MsG0380015857.01.T01:CDS | 50.0% | |
| ATATGTCGTGTACCGGGTGA+GGG | - | Chr3:75913682-75913701 | MsG0380015857.01.T01:CDS | 50.0% | |
| ATGACAATCGGGTATGGGGA+CGG | - | Chr3:75912005-75912024 | MsG0380015857.01.T01:three_prime_UTR | 50.0% | |
| GTTACCCTACCCATACCCAA+CGG | + | Chr3:75911975-75911994 | None:intergenic | 50.0% | |
| GTTGGGTATGGGTAGGGTAA+CGG | - | Chr3:75911974-75911993 | MsG0380015857.01.T01:three_prime_UTR | 50.0% | |
| TAGGAAGAGGCCAGTTTCCA+AGG | - | Chr3:75913718-75913737 | MsG0380015857.01.T01:CDS | 50.0% | |
| TATGGTAAGCCCACCAACCA+GGG | - | Chr3:75913749-75913768 | MsG0380015857.01.T01:intron | 50.0% | |
| TCAGGGATATGTCGTGTACC+GGG | - | Chr3:75913676-75913695 | MsG0380015857.01.T01:CDS | 50.0% | |
| TTACCCTACCCATACCCAAC+GGG | + | Chr3:75911974-75911993 | None:intergenic | 50.0% | |
| TTATGGTAAGCCCACCAACC+AGG | - | Chr3:75913748-75913767 | MsG0380015857.01.T01:intron | 50.0% | |
| TTCTCTTCCAGTTTGCCCTG+CGG | + | Chr3:75914164-75914183 | None:intergenic | 50.0% | |
| TTGGGTATGGGTAGGGTAAC+GGG | - | Chr3:75911975-75911994 | MsG0380015857.01.T01:three_prime_UTR | 50.0% | |
| ! | ACGGAAGCTTGGTGGTCTTA+GGG | - | Chr3:75913829-75913848 | MsG0380015857.01.T01:intron | 50.0% |
| ! | ATGGACGGGCTTTGTGGTAA+CGG | + | Chr3:75914140-75914159 | None:intergenic | 50.0% |
| ! | CCCGAGATGAAAGCCCATTT+TGG | - | Chr3:75912426-75912445 | MsG0380015857.01.T01:intron | 50.0% |
| ! | TTTGGTTGTGATGTGCTGGC+TGG | - | Chr3:75913912-75913931 | MsG0380015857.01.T01:intron | 50.0% |
| !! | ACTTGAGTTGGGTAACTCCC+TGG | + | Chr3:75913769-75913788 | None:intergenic | 50.0% |
| ACTAGACATGGCAATGGGGC+GGG | + | Chr3:75912053-75912072 | None:intergenic | 55.0% | |
| AGTTCCCTGTGCTTGTGGAC+TGG | + | Chr3:75914063-75914082 | None:intergenic | 55.0% | |
| ATCCCCGTTGGGTATGGGTA+GGG | - | Chr3:75911968-75911987 | MsG0380015857.01.T01:three_prime_UTR | 55.0% | |
| CAACCCAGTCCACAAGCACA+GGG | - | Chr3:75914056-75914075 | MsG0380015857.01.T01:intron | 55.0% | |
| CACAAGCACAGGGAACTTCG+TGG | - | Chr3:75914066-75914085 | MsG0380015857.01.T01:intron | 55.0% | |
| CACGAAGTTCCCTGTGCTTG+TGG | + | Chr3:75914068-75914087 | None:intergenic | 55.0% | |
| CCTGACAAGGCTCGTCGTTT+GGG | - | Chr3:75912780-75912799 | MsG0380015857.01.T01:intron | 55.0% | |
| CTTCGTGGTCTCACTTCTGC+TGG | - | Chr3:75914081-75914100 | MsG0380015857.01.T01:intron | 55.0% | |
| GAGTTGGGTAACTCCCTGGT+TGG | + | Chr3:75913765-75913784 | None:intergenic | 55.0% | |
| GATATGTCGTGTACCGGGTG+AGG | - | Chr3:75913681-75913700 | MsG0380015857.01.T01:CDS | 55.0% | |
| GTTCCCTGTGCTTGTGGACT+GGG | + | Chr3:75914062-75914081 | None:intergenic | 55.0% | |
| TACCCTACCCATACCCAACG+GGG | + | Chr3:75911973-75911992 | None:intergenic | 55.0% | |
| TACGCAGAGGTGGTAGGAAG+AGG | - | Chr3:75913705-75913724 | MsG0380015857.01.T01:CDS | 55.0% | |
| TAGGCGCAGCAAACCCAGTA+AGG | + | Chr3:75912499-75912518 | None:intergenic | 55.0% | |
| TCCTGACAAGGCTCGTCGTT+TGG | - | Chr3:75912779-75912798 | MsG0380015857.01.T01:intron | 55.0% | |
| TCTCTTCCAGTTTGCCCTGC+GGG | + | Chr3:75914163-75914182 | None:intergenic | 55.0% | |
| TGACAATCGGGTATGGGGAC+GGG | - | Chr3:75912006-75912025 | MsG0380015857.01.T01:three_prime_UTR | 55.0% | |
| TGCGATTCATGCAGCGTGTG+AGG | - | Chr3:75912703-75912722 | MsG0380015857.01.T01:intron | 55.0% | |
| TGGGTAACTCCCTGGTTGGT+GGG | + | Chr3:75913761-75913780 | None:intergenic | 55.0% | |
| TTGGGTAACTCCCTGGTTGG+TGG | + | Chr3:75913762-75913781 | None:intergenic | 55.0% | |
| ! | GACGGAAGCTTGGTGGTCTT+AGG | - | Chr3:75913828-75913847 | MsG0380015857.01.T01:intron | 55.0% |
| ! | GGCTCGTCGTTTGGGTTACA+AGG | - | Chr3:75912788-75912807 | MsG0380015857.01.T01:intron | 55.0% |
| AGTTAACACCTGGGTGGGGC+AGG | - | Chr3:75913125-75913144 | MsG0380015857.01.T01:intron | 60.0% | |
| AGTTTGCCCTGCGGGATGGA+CGG | + | Chr3:75914155-75914174 | None:intergenic | 60.0% | |
| ATACCCGAACCCGTTGGGGA+CGG | - | Chr3:75911926-75911945 | MsG0380015857.01.T01:three_prime_UTR | 60.0% | |
| CAGACCCACTCGTCCTGACA+AGG | - | Chr3:75912767-75912786 | MsG0380015857.01.T01:intron | 60.0% | |
| CATCCCCGTTGGGTATGGGT+AGG | - | Chr3:75911967-75911986 | MsG0380015857.01.T01:three_prime_UTR | 60.0% | |
| CCAACCCAGTCCACAAGCAC+AGG | - | Chr3:75914055-75914074 | MsG0380015857.01.T01:intron | 60.0% | |
| CTAGACATGGCAATGGGGCG+GGG | + | Chr3:75912052-75912071 | None:intergenic | 60.0% | |
| CTTGTCAGGACGAGTGGGTC+TGG | + | Chr3:75912769-75912788 | None:intergenic | 60.0% | |
| GACAATCGGGTATGGGGACG+GGG | - | Chr3:75912007-75912026 | MsG0380015857.01.T01:three_prime_UTR | 60.0% | |
| TCATGCAGCGTGTGAGGTGC+TGG | - | Chr3:75912709-75912728 | MsG0380015857.01.T01:intron | 60.0% | |
| TCCAGCACGCTCTTCAGCGA+CGG | + | Chr3:75913810-75913829 | None:intergenic | 60.0% | |
| TTCCAGTTTGCCCTGCGGGA+TGG | + | Chr3:75914159-75914178 | None:intergenic | 60.0% | |
| TTGTAACTCCTGCCCCACCC+AGG | + | Chr3:75913136-75913155 | None:intergenic | 60.0% | |
| ! | AACGGTAACGGCGGAGAGAC+AGG | + | Chr3:75914194-75914213 | None:intergenic | 60.0% |
| ! | ACGAGCCTTGTCAGGACGAG+TGG | + | Chr3:75912775-75912794 | None:intergenic | 60.0% |
| ! | ACGGTAACGGCGGAGAGACA+GGG | + | Chr3:75914193-75914212 | None:intergenic | 60.0% |
| ! | CATGCAGCGTGTGAGGTGCT+GGG | - | Chr3:75912710-75912729 | MsG0380015857.01.T01:intron | 60.0% |
| ! | CCCAAACGACGAGCCTTGTC+AGG | + | Chr3:75912783-75912802 | None:intergenic | 60.0% |
| ! | CGAGCCTTGTCAGGACGAGT+GGG | + | Chr3:75912774-75912793 | None:intergenic | 60.0% |
| ! | TCGCTGAAGAGCGTGCTGGA+CGG | - | Chr3:75913810-75913829 | MsG0380015857.01.T01:intron | 60.0% |
| ! | TGAGGGTACGCAGAGGTGGT+AGG | - | Chr3:75913699-75913718 | MsG0380015857.01.T01:CDS | 60.0% |
| !! | CCTGTGCTTGTGGACTGGGT+TGG | + | Chr3:75914058-75914077 | None:intergenic | 60.0% |
| AACCCCAACCCCGTCCCCAA+CGG | + | Chr3:75911939-75911958 | None:intergenic | 65.0% | |
| AACCCGTTGGGGACGGGGTT+GGG | - | Chr3:75911933-75911952 | MsG0380015857.01.T01:three_prime_UTR | 65.0% | |
| ACAAAGCCCGTCCATCCCGC+AGG | - | Chr3:75914145-75914164 | MsG0380015857.01.T01:intron | 65.0% | |
| ACATGGCAATGGGGCGGGGT+GGG | + | Chr3:75912048-75912067 | None:intergenic | 65.0% | |
| CAAAGCCCGTCCATCCCGCA+GGG | - | Chr3:75914146-75914165 | MsG0380015857.01.T01:intron | 65.0% | |
| CACCTCTGCGTACCCTCACC+CGG | + | Chr3:75913697-75913716 | None:intergenic | 65.0% | |
| CGGGGATACCCGAACCCGTT+GGG | - | Chr3:75911921-75911940 | MsG0380015857.01.T01:three_prime_UTR | 65.0% | |
| CGTGCTGGACGGAAGCTTGG+TGG | - | Chr3:75913821-75913840 | MsG0380015857.01.T01:intron | 65.0% | |
| GAGCGTGCTGGACGGAAGCT+TGG | - | Chr3:75913818-75913837 | MsG0380015857.01.T01:intron | 65.0% | |
| GGGGATACCCGAACCCGTTG+GGG | - | Chr3:75911922-75911941 | MsG0380015857.01.T01:three_prime_UTR | 65.0% | |
| GTCCATCCCGCAGGGCAAAC+TGG | - | Chr3:75914154-75914173 | MsG0380015857.01.T01:intron | 65.0% | |
| GTTTGCCCTGCGGGATGGAC+GGG | + | Chr3:75914154-75914173 | None:intergenic | 65.0% | |
| TACCCGAACCCGTTGGGGAC+GGG | - | Chr3:75911927-75911946 | MsG0380015857.01.T01:three_prime_UTR | 65.0% | |
| ! | AACCCCGTCCCCAACGGGTT+CGG | + | Chr3:75911933-75911952 | None:intergenic | 65.0% |
| ! | TACCGGGTGAGGGTACGCAG+AGG | - | Chr3:75913692-75913711 | MsG0380015857.01.T01:CDS | 65.0% |
| ! | TCCGTCGCTGAAGAGCGTGC+TGG | - | Chr3:75913806-75913825 | MsG0380015857.01.T01:intron | 65.0% |
| ! | TGCGGGATGGACGGGCTTTG+TGG | + | Chr3:75914146-75914165 | None:intergenic | 65.0% |
| ACCCCAACCCCGTCCCCAAC+GGG | + | Chr3:75911938-75911957 | None:intergenic | 70.0% | |
| ACCCGAACCCGTTGGGGACG+GGG | - | Chr3:75911928-75911947 | MsG0380015857.01.T01:three_prime_UTR | 70.0% | |
| ACCCGTTGGGGACGGGGTTG+GGG | - | Chr3:75911934-75911953 | MsG0380015857.01.T01:three_prime_UTR | 70.0% | |
| CATGGCAATGGGGCGGGGTG+GGG | + | Chr3:75912047-75912066 | None:intergenic | 70.0% | |
| GAACCCGTTGGGGACGGGGT+TGG | - | Chr3:75911932-75911951 | MsG0380015857.01.T01:three_prime_UTR | 70.0% | |
| GACATGGCAATGGGGCGGGG+TGG | + | Chr3:75912049-75912068 | None:intergenic | 70.0% | |
| GCGGGGATACCCGAACCCGT+TGG | - | Chr3:75911920-75911939 | MsG0380015857.01.T01:three_prime_UTR | 70.0% | |
| ! | ACCCCGTCCCCAACGGGTTC+GGG | + | Chr3:75911932-75911951 | None:intergenic | 70.0% |
| ! | CGGGTGAGGGTACGCAGAGG+TGG | - | Chr3:75913695-75913714 | MsG0380015857.01.T01:CDS | 70.0% |
| CAATGGGGCGGGGTGGGGAC+GGG | + | Chr3:75912042-75912061 | None:intergenic | 75.0% | |
| GCAATGGGGCGGGGTGGGGA+CGG | + | Chr3:75912043-75912062 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 75911915 | 75914486 | 75911915 | ID=MsG0380015857.01;Name=MsG0380015857.01 |
| Chr3 | mRNA | 75911915 | 75914486 | 75911915 | ID=MsG0380015857.01.T01;Parent=MsG0380015857.01;Name=MsG0380015857.01.T01;_AED=0.54;_eAED=0.54;_QI=0|0.66|0.75|0.75|1|1|4|271|230 |
| Chr3 | exon | 75911915 | 75912431 | 75911915 | ID=MsG0380015857.01.T01:exon:24853;Parent=MsG0380015857.01.T01 |
| Chr3 | exon | 75912524 | 75912721 | 75912524 | ID=MsG0380015857.01.T01:exon:24852;Parent=MsG0380015857.01.T01 |
| Chr3 | exon | 75913583 | 75913749 | 75913583 | ID=MsG0380015857.01.T01:exon:24851;Parent=MsG0380015857.01.T01 |
| Chr3 | exon | 75914405 | 75914486 | 75914405 | ID=MsG0380015857.01.T01:exon:24850;Parent=MsG0380015857.01.T01 |
| Chr3 | CDS | 75914405 | 75914486 | 75914405 | ID=MsG0380015857.01.T01:cds;Parent=MsG0380015857.01.T01 |
| Chr3 | CDS | 75913583 | 75913749 | 75913583 | ID=MsG0380015857.01.T01:cds;Parent=MsG0380015857.01.T01 |
| Chr3 | CDS | 75912524 | 75912721 | 75912524 | ID=MsG0380015857.01.T01:cds;Parent=MsG0380015857.01.T01 |
| Chr3 | CDS | 75912186 | 75912431 | 75912186 | ID=MsG0380015857.01.T01:cds;Parent=MsG0380015857.01.T01 |
| Chr3 | three_prime_UTR | 75911915 | 75912185 | 75911915 | ID=MsG0380015857.01.T01:three_prime_utr;Parent=MsG0380015857.01.T01 |
| Gene Sequence |
| Protein sequence |
