Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001588.01.T01 | XP_003589787.2 | 99.111 | 225 | 2 | 0 | 1 | 225 | 245 | 469 | 4.31E-155 | 448 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001588.01.T01 | Q9LHE3 | 75.714 | 210 | 51 | 0 | 16 | 225 | 261 | 470 | 3.50E-105 | 314 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001588.01.T01 | G7ICI5 | 99.111 | 225 | 2 | 0 | 1 | 225 | 245 | 469 | 2.06e-155 | 448 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0180001588.01 | 0.836480 | 9.129585e-57 | 1.151960e-53 |
| MsG0080048258.01 | MsG0180001588.01 | 0.828792 | 7.382716e-55 | 7.413681e-52 |
| MsG0080048797.01 | MsG0180001588.01 | 0.828677 | 7.872462e-55 | 7.879283e-52 |
| MsG0180000096.01 | MsG0180001588.01 | 0.813648 | 2.301050e-51 | 1.511284e-48 |
| MsG0180000350.01 | MsG0180001588.01 | 0.800699 | 1.275051e-48 | 5.976203e-46 |
| MsG0180000698.01 | MsG0180001588.01 | 0.814214 | 1.726726e-51 | 1.151566e-48 |
| MsG0180001288.01 | MsG0180001588.01 | 0.809465 | 1.867539e-50 | 1.097262e-47 |
| MsG0180001293.01 | MsG0180001588.01 | 0.802991 | 4.314063e-49 | 2.143118e-46 |
| MsG0180001588.01 | MsG0180001719.01 | 0.819219 | 1.303071e-52 | 9.966244e-50 |
| MsG0180001588.01 | MsG0180003857.01 | 0.817927 | 2.557596e-52 | 1.887776e-49 |
| MsG0180001588.01 | MsG0180003905.01 | 0.859138 | 5.088771e-63 | 1.330019e-59 |
| MsG0180001588.01 | MsG0180004064.01 | 0.801854 | 7.397210e-49 | 3.570147e-46 |
| MsG0180001588.01 | MsG0180004120.01 | 0.867590 | 1.223839e-65 | 4.296097e-62 |
| MsG0180001588.01 | MsG0180004471.01 | 0.829203 | 5.871608e-55 | 5.968842e-52 |
| MsG0180001588.01 | MsG0180004538.01 | 0.817073 | 3.983721e-52 | 2.872322e-49 |
| MsG0180001588.01 | MsG0180004583.01 | 0.846982 | 1.542226e-59 | 2.701286e-56 |
| MsG0180001588.01 | MsG0180004652.01 | 0.829297 | 5.569110e-55 | 5.677541e-52 |
| MsG0180001588.01 | MsG0180004828.01 | 0.835581 | 1.543911e-56 | 1.895999e-53 |
| MsG0180001588.01 | MsG0180005553.01 | 0.828069 | 1.103409e-54 | 1.085033e-51 |
| MsG0180001588.01 | MsG0180006133.01 | 0.828447 | 8.943124e-55 | 8.891963e-52 |
| MsG0180001588.01 | MsG0180006183.01 | 0.836565 | 8.688012e-57 | 1.098958e-53 |
| MsG0180001588.01 | MsG0280006717.01 | 0.837794 | 4.211016e-57 | 5.530800e-54 |
| MsG0180001588.01 | MsG0280006909.01 | 0.821715 | 3.483697e-53 | 2.856425e-50 |
| MsG0180001588.01 | MsG0280007092.01 | 0.810973 | 8.832328e-51 | 5.401107e-48 |
| MsG0180001588.01 | MsG0280007544.01 | 0.804641 | 1.959696e-49 | 1.015719e-46 |
| MsG0180001588.01 | MsG0280007695.01 | 0.835577 | 1.547314e-56 | 1.899942e-53 |
| MsG0180001588.01 | MsG0280009866.01 | 0.863602 | 2.214778e-64 | 6.752748e-61 |
| MsG0180001588.01 | MsG0280010617.01 | 0.823093 | 1.667141e-53 | 1.421617e-50 |
| MsG0180001588.01 | MsG0280010825.01 | 0.812994 | 3.202886e-51 | 2.066579e-48 |
| MsG0180001588.01 | MsG0380011846.01 | 0.830476 | 2.873913e-55 | 3.031119e-52 |
| MsG0180001588.01 | MsG0380012118.01 | 0.824141 | 9.478532e-54 | 8.325065e-51 |
| MsG0180001588.01 | MsG0380012367.01 | 0.843601 | 1.267662e-58 | 1.993687e-55 |
| MsG0180001588.01 | MsG0380012818.01 | 0.902053 | 1.435174e-78 | 1.995278e-74 |
| MsG0180001588.01 | MsG0380014542.01 | 0.860954 | 1.440806e-63 | 4.008822e-60 |
| MsG0180001588.01 | MsG0380014544.01 | 0.868139 | 8.152810e-66 | 2.917753e-62 |
| MsG0180001588.01 | MsG0380015090.01 | 0.803533 | 3.330675e-49 | 1.677929e-46 |
| MsG0180001588.01 | MsG0380015340.01 | 0.817214 | 3.702622e-52 | 2.679974e-49 |
| MsG0180001588.01 | MsG0380015402.01 | 0.887937 | 9.193196e-73 | 6.976533e-69 |
| MsG0180001588.01 | MsG0380015409.01 | 0.819602 | 1.065413e-52 | 8.236065e-50 |
| MsG0180001588.01 | MsG0380015552.01 | 0.818619 | 1.783087e-52 | 1.341343e-49 |
| MsG0180001588.01 | MsG0380015656.01 | 0.821660 | 3.586967e-53 | 2.936460e-50 |
| MsG0180001588.01 | MsG0380015825.01 | 0.838602 | 2.609250e-57 | 3.512457e-54 |
| MsG0180001588.01 | MsG0380016027.01 | 0.822751 | 2.003150e-53 | 1.691744e-50 |
| MsG0180001588.01 | MsG0380016031.01 | 0.840107 | 1.060809e-57 | 1.495778e-54 |
| MsG0180001588.01 | MsG0380016091.01 | 0.808891 | 2.478024e-50 | 1.433742e-47 |
| MsG0180001588.01 | MsG0380016143.01 | 0.801189 | 1.012532e-48 | 4.805257e-46 |
| MsG0180001588.01 | MsG0380016225.01 | 0.825204 | 5.324143e-54 | 4.820913e-51 |
| MsG0180001588.01 | MsG0380016760.01 | 0.800708 | 1.269780e-48 | 5.952769e-46 |
| MsG0180001588.01 | MsG0380016819.01 | 0.871255 | 7.854477e-67 | 3.147455e-63 |
| MsG0180001588.01 | MsG0380017079.01 | 0.841543 | 4.459612e-58 | 6.574148e-55 |
| MsG0180001588.01 | MsG0380017128.01 | 0.811588 | 6.494789e-51 | 4.036130e-48 |
| MsG0180001588.01 | MsG0380017155.01 | 0.811617 | 6.399629e-51 | 3.980006e-48 |
| MsG0180001588.01 | MsG0380017282.01 | 0.804155 | 2.474281e-49 | 1.266519e-46 |
| MsG0180001588.01 | MsG0380017380.01 | 0.817826 | 2.696210e-52 | 1.984554e-49 |
| MsG0180001588.01 | MsG0380017416.01 | 0.840877 | 6.672090e-58 | 9.634552e-55 |
| MsG0180001588.01 | MsG0380017588.01 | 0.865587 | 5.299232e-65 | 1.733402e-61 |
| MsG0180001588.01 | MsG0380017696.01 | 0.845160 | 4.827901e-59 | 7.973946e-56 |
| MsG0180001588.01 | MsG0380017700.01 | 0.826780 | 2.247937e-54 | 2.128766e-51 |
| MsG0180001588.01 | MsG0380018055.01 | 0.827624 | 1.411627e-54 | 1.369996e-51 |
| MsG0180001588.01 | MsG0480018106.01 | 0.808436 | 3.100467e-50 | 1.772749e-47 |
| MsG0180001588.01 | MsG0480018228.01 | 0.838898 | 2.186654e-57 | 2.970007e-54 |
| MsG0180001588.01 | MsG0480018767.01 | 0.850347 | 1.801008e-60 | 3.517146e-57 |
| MsG0180001588.01 | MsG0480020366.01 | 0.804979 | 1.665465e-49 | 8.708162e-47 |
| MsG0180001588.01 | MsG0480020398.01 | 0.822372 | 2.453916e-53 | 2.050238e-50 |
| MsG0180001588.01 | MsG0480020937.01 | 0.838724 | 2.425395e-57 | 3.277244e-54 |
| MsG0180001588.01 | MsG0480021100.01 | 0.845154 | 4.846062e-59 | 8.002055e-56 |
| MsG0180001588.01 | MsG0480021175.01 | 0.808570 | 2.902439e-50 | 1.665231e-47 |
| MsG0180001588.01 | MsG0480021301.01 | 0.820970 | 5.175888e-53 | 4.156835e-50 |
| MsG0180001588.01 | MsG0480021456.01 | 0.835182 | 1.947481e-56 | 2.363220e-53 |
| MsG0180001588.01 | MsG0480021486.01 | 0.866545 | 2.636269e-65 | 8.919078e-62 |
| MsG0180001588.01 | MsG0480021740.01 | 0.862316 | 5.524417e-64 | 1.610962e-60 |
| MsG0180001588.01 | MsG0480021773.01 | 0.870457 | 1.437985e-66 | 5.597889e-63 |
| MsG0180001588.01 | MsG0480021902.01 | 0.830445 | 2.925026e-55 | 3.082254e-52 |
| MsG0180001588.01 | MsG0480022307.01 | 0.830728 | 2.493416e-55 | 2.649597e-52 |
| MsG0180001588.01 | MsG0480022320.01 | 0.802799 | 4.725706e-49 | 2.336356e-46 |
| MsG0180001588.01 | MsG0480022378.01 | 0.829155 | 6.030078e-55 | 6.120674e-52 |
| MsG0180001588.01 | MsG0480022784.01 | 0.805417 | 1.348196e-49 | 7.128864e-47 |
| MsG0180001588.01 | MsG0480023375.01 | -0.826905 | 2.098882e-54 | 1.995067e-51 |
| MsG0180001588.01 | MsG0480023414.01 | 0.814924 | 1.202198e-51 | 8.172675e-49 |
| MsG0180001588.01 | MsG0480023426.01 | 0.841986 | 3.406730e-58 | 5.092122e-55 |
| MsG0180001588.01 | MsG0480023532.01 | 0.811058 | 8.463087e-51 | 5.186648e-48 |
| MsG0180001588.01 | MsG0480023575.01 | 0.819886 | 9.174601e-53 | 7.149133e-50 |
| MsG0180001588.01 | MsG0480023626.01 | 0.879934 | 8.304320e-70 | 4.589953e-66 |
| MsG0180001588.01 | MsG0480023653.01 | 0.824154 | 9.414647e-54 | 8.271861e-51 |
| MsG0180001588.01 | MsG0480023663.01 | 0.803784 | 2.955209e-49 | 1.498334e-46 |
| MsG0180001588.01 | MsG0480023706.01 | 0.844090 | 9.377286e-59 | 1.497473e-55 |
| MsG0180001588.01 | MsG0480023774.01 | 0.804889 | 1.739246e-49 | 9.073612e-47 |
| MsG0180001588.01 | MsG0480023842.01 | 0.835764 | 1.387957e-56 | 1.713929e-53 |
| MsG0180001588.01 | MsG0480023913.01 | 0.857027 | 2.158071e-62 | 5.252727e-59 |
| MsG0180001588.01 | MsG0480024002.01 | 0.807294 | 5.422979e-50 | 3.009275e-47 |
| MsG0180001588.01 | MsG0480024019.01 | 0.883546 | 4.095582e-71 | 2.608355e-67 |
| MsG0180001588.01 | MsG0580024158.01 | 0.833465 | 5.252163e-56 | 6.053108e-53 |
| MsG0180001588.01 | MsG0580024276.01 | 0.857214 | 1.900819e-62 | 4.656462e-59 |
| MsG0180001588.01 | MsG0580024773.01 | 0.834505 | 2.883039e-56 | 3.428510e-53 |
| MsG0180001588.01 | MsG0580025038.01 | 0.821466 | 3.976964e-53 | 3.237969e-50 |
| MsG0180001588.01 | MsG0580025186.01 | 0.800316 | 1.526071e-48 | 7.084142e-46 |
| MsG0180001588.01 | MsG0580025504.01 | 0.844158 | 8.990335e-59 | 1.438759e-55 |
| MsG0180001588.01 | MsG0580026282.01 | 0.811741 | 6.015040e-51 | 3.753251e-48 |
| MsG0180001588.01 | MsG0580026343.01 | 0.814616 | 1.407236e-51 | 9.487930e-49 |
| MsG0180001588.01 | MsG0580028364.01 | 0.808984 | 2.367900e-50 | 1.373441e-47 |
| MsG0180001588.01 | MsG0580028927.01 | 0.814451 | 1.530674e-51 | 1.027428e-48 |
| MsG0180001588.01 | MsG0580028955.01 | 0.843511 | 1.339594e-58 | 2.100738e-55 |
| MsG0180001588.01 | MsG0580030141.01 | 0.835303 | 1.815511e-56 | 2.211406e-53 |
| MsG0180001588.01 | MsG0680031356.01 | 0.839457 | 1.566737e-57 | 2.164904e-54 |
| MsG0180001588.01 | MsG0680033645.01 | 0.810889 | 9.207400e-51 | 5.617690e-48 |
| MsG0180001588.01 | MsG0680035792.01 | 0.846558 | 2.014018e-59 | 3.480105e-56 |
| MsG0180001588.01 | MsG0680035905.01 | 0.819677 | 1.024331e-52 | 7.935027e-50 |
| MsG0180001588.01 | MsG0780036553.01 | 0.813024 | 3.155616e-51 | 2.037661e-48 |
| MsG0180001588.01 | MsG0780038393.01 | 0.844451 | 7.498744e-59 | 1.211047e-55 |
| MsG0180001588.01 | MsG0780038647.01 | 0.822860 | 1.889894e-53 | 1.600957e-50 |
| MsG0180001588.01 | MsG0780038736.01 | 0.818286 | 2.122121e-52 | 1.581788e-49 |
| MsG0180001588.01 | MsG0780039303.01 | 0.822028 | 2.948870e-53 | 2.439364e-50 |
| MsG0180001588.01 | MsG0780039536.01 | 0.838709 | 2.447698e-57 | 3.305973e-54 |
| MsG0180001588.01 | MsG0780040641.01 | 0.811829 | 5.757275e-51 | 3.600710e-48 |
| MsG0180001588.01 | MsG0780040830.01 | 0.828374 | 9.315138e-55 | 9.241911e-52 |
| MsG0180001588.01 | MsG0780040978.01 | 0.844734 | 6.290959e-59 | 1.025213e-55 |
| MsG0180001588.01 | MsG0780040990.01 | 0.807884 | 4.064888e-50 | 2.290429e-47 |
| MsG0180001588.01 | MsG0780041219.01 | 0.808190 | 3.498723e-50 | 1.987549e-47 |
| MsG0180001588.01 | MsG0780041271.01 | 0.802611 | 5.167446e-49 | 2.542455e-46 |
| MsG0180001588.01 | MsG0780041273.01 | 0.820654 | 6.119284e-53 | 4.870526e-50 |
| MsG0180001588.01 | MsG0780041359.01 | 0.802257 | 6.112008e-49 | 2.980228e-46 |
| MsG0180001588.01 | MsG0780041775.01 | 0.827638 | 1.400684e-54 | 1.359989e-51 |
| MsG0180001588.01 | MsG0780041820.01 | 0.837758 | 4.303522e-57 | 5.646354e-54 |
| MsG0180001588.01 | MsG0880042392.01 | 0.848160 | 7.315664e-60 | 1.330367e-56 |
| MsG0180001588.01 | MsG0880042833.01 | 0.831928 | 1.264114e-55 | 1.391984e-52 |
| MsG0180001588.01 | MsG0880043684.01 | 0.864185 | 1.458659e-64 | 4.539357e-61 |
| MsG0180001588.01 | MsG0880043714.01 | 0.835165 | 1.966226e-56 | 2.384791e-53 |
| MsG0180001588.01 | MsG0880043907.01 | 0.801252 | 9.829254e-49 | 4.672185e-46 |
| MsG0180001588.01 | MsG0880044139.01 | 0.813021 | 3.160395e-51 | 2.040583e-48 |
| MsG0180001588.01 | MsG0880044989.01 | 0.803193 | 3.918095e-49 | 1.956616e-46 |
| MsG0180001588.01 | MsG0880045015.01 | 0.840429 | 8.744267e-58 | 1.245189e-54 |
| MsG0180001588.01 | MsG0880045356.01 | 0.838179 | 3.353621e-57 | 4.455918e-54 |
| MsG0180001588.01 | MsG0880045584.01 | 0.806704 | 7.227625e-50 | 3.949676e-47 |
| MsG0180001588.01 | MsG0880045612.01 | 0.819529 | 1.107158e-52 | 8.542094e-50 |
| MsG0180001588.01 | MsG0880045647.01 | 0.858920 | 5.915512e-63 | 1.534764e-59 |
| MsG0180001588.01 | MsG0880045836.01 | 0.823912 | 1.072903e-53 | 9.362967e-51 |
| MsG0180001588.01 | MsG0880045989.01 | 0.806927 | 6.485616e-50 | 3.564690e-47 |
| MsG0180001588.01 | MsG0880046529.01 | 0.840117 | 1.054405e-57 | 1.487192e-54 |
| MsG0180001588.01 | MsG0880046904.01 | 0.815665 | 8.227986e-52 | 5.708326e-49 |
| MsG0180001588.01 | MsG0880046905.01 | 0.851264 | 9.940697e-61 | 2.000781e-57 |
| MsG0180001588.01 | MsG0880046991.01 | 0.816455 | 5.481370e-52 | 3.885623e-49 |
| MsG0180001588.01 | MsG0880046993.01 | 0.821671 | 3.566971e-53 | 2.920966e-50 |
| MsG0180001588.01 | MsG0880047090.01 | 0.802706 | 4.940264e-49 | 2.436592e-46 |
| MsG0180001588.01 | MsG0880047331.01 | 0.839528 | 1.501559e-57 | 2.079227e-54 |
| MsG0180001588.01 | MsG0880047414.01 | 0.832947 | 7.067753e-56 | 8.020546e-53 |
| MsG0180001588.01 | MsG0880047649.01 | 0.821672 | 3.564980e-53 | 2.919473e-50 |
| MsG0180001588.01 | MsG0880047681.01 | 0.826420 | 2.739854e-54 | 2.568249e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001588.01.T01 | MTR_1g039270 | 99.111 | 225 | 2 | 0 | 1 | 225 | 245 | 469 | 5.22e-159 | 448 |
| MsG0180001588.01.T01 | MTR_1g115210 | 80.000 | 225 | 45 | 0 | 1 | 225 | 262 | 486 | 6.14e-118 | 345 |
| MsG0180001588.01.T01 | MTR_1g111350 | 50.667 | 225 | 107 | 2 | 1 | 225 | 247 | 467 | 1.92e-64 | 207 |
| MsG0180001588.01.T01 | MTR_7g117430 | 47.867 | 211 | 107 | 3 | 17 | 225 | 275 | 484 | 1.20e-57 | 189 |
| MsG0180001588.01.T01 | MTR_6g085010 | 46.222 | 225 | 115 | 3 | 1 | 225 | 273 | 491 | 3.76e-55 | 183 |
| MsG0180001588.01.T01 | MTR_8g103880 | 37.778 | 225 | 135 | 3 | 2 | 225 | 235 | 455 | 8.30e-45 | 155 |
| MsG0180001588.01.T01 | MTR_3g097150 | 38.158 | 228 | 131 | 7 | 2 | 225 | 225 | 446 | 2.39e-42 | 149 |
| MsG0180001588.01.T01 | MTR_4g007740 | 34.199 | 231 | 139 | 3 | 1 | 225 | 254 | 477 | 2.50e-38 | 139 |
| MsG0180001588.01.T01 | MTR_3g053980 | 39.437 | 213 | 119 | 5 | 15 | 225 | 281 | 485 | 6.09e-33 | 124 |
| MsG0180001588.01.T01 | MTR_3g053710 | 36.364 | 231 | 134 | 5 | 1 | 225 | 243 | 466 | 1.86e-31 | 120 |
| MsG0180001588.01.T01 | MTR_3g046300 | 33.193 | 238 | 138 | 4 | 1 | 225 | 229 | 458 | 4.14e-30 | 116 |
| MsG0180001588.01.T01 | MTR_3g100500 | 34.884 | 215 | 123 | 9 | 20 | 225 | 231 | 437 | 5.78e-29 | 112 |
| MsG0180001588.01.T01 | MTR_2g028190 | 31.624 | 234 | 142 | 8 | 1 | 225 | 227 | 451 | 3.23e-28 | 110 |
| MsG0180001588.01.T01 | MTR_8g096990 | 32.174 | 230 | 136 | 11 | 4 | 225 | 212 | 429 | 1.79e-27 | 108 |
| MsG0180001588.01.T01 | MTR_1g037630 | 35.096 | 208 | 115 | 6 | 28 | 225 | 231 | 428 | 6.09e-26 | 104 |
| MsG0180001588.01.T01 | MTR_3g014290 | 35.096 | 208 | 115 | 6 | 28 | 225 | 219 | 416 | 9.39e-26 | 103 |
| MsG0180001588.01.T01 | MTR_5g080960 | 32.895 | 228 | 139 | 9 | 4 | 225 | 212 | 431 | 2.53e-25 | 102 |
| MsG0180001588.01.T01 | MTR_5g080890 | 32.456 | 228 | 140 | 9 | 4 | 225 | 212 | 431 | 2.64e-25 | 102 |
| MsG0180001588.01.T01 | MTR_1g060750 | 32.314 | 229 | 130 | 8 | 5 | 225 | 163 | 374 | 3.15e-25 | 102 |
| MsG0180001588.01.T01 | MTR_0036s0110 | 31.858 | 226 | 134 | 9 | 5 | 225 | 230 | 440 | 3.60e-25 | 102 |
| MsG0180001588.01.T01 | MTR_2g055840 | 29.958 | 237 | 143 | 7 | 6 | 225 | 143 | 373 | 1.12e-24 | 100 |
| MsG0180001588.01.T01 | MTR_8g039540 | 33.981 | 206 | 122 | 6 | 27 | 225 | 235 | 433 | 1.83e-24 | 100 |
| MsG0180001588.01.T01 | MTR_2g105300 | 29.464 | 224 | 143 | 10 | 5 | 222 | 165 | 379 | 4.78e-24 | 98.6 |
| MsG0180001588.01.T01 | MTR_8g038250 | 30.380 | 237 | 137 | 13 | 4 | 225 | 190 | 413 | 5.02e-23 | 96.3 |
| MsG0180001588.01.T01 | MTR_5g044770 | 31.330 | 233 | 140 | 10 | 1 | 225 | 208 | 428 | 7.53e-23 | 95.9 |
| MsG0180001588.01.T01 | MTR_2g067830 | 29.515 | 227 | 145 | 10 | 5 | 225 | 187 | 404 | 2.82e-22 | 94.0 |
| MsG0180001588.01.T01 | MTR_5g091130 | 31.760 | 233 | 150 | 4 | 1 | 225 | 322 | 553 | 4.19e-22 | 94.4 |
| MsG0180001588.01.T01 | MTR_8g038280 | 29.310 | 232 | 144 | 10 | 4 | 225 | 212 | 433 | 3.19e-21 | 91.3 |
| MsG0180001588.01.T01 | MTR_7g105850 | 30.204 | 245 | 137 | 8 | 6 | 225 | 230 | 465 | 1.02e-20 | 90.1 |
| MsG0180001588.01.T01 | MTR_8g038310 | 31.416 | 226 | 138 | 9 | 5 | 225 | 198 | 411 | 2.33e-20 | 89.0 |
| MsG0180001588.01.T01 | MTR_0036s0050 | 31.278 | 227 | 133 | 9 | 5 | 225 | 224 | 433 | 1.21e-19 | 87.0 |
| MsG0180001588.01.T01 | MTR_3g028120 | 29.333 | 225 | 149 | 6 | 5 | 225 | 218 | 436 | 1.70e-19 | 86.7 |
| MsG0180001588.01.T01 | MTR_4g100990 | 28.736 | 261 | 146 | 10 | 2 | 225 | 213 | 470 | 5.55e-19 | 85.1 |
| MsG0180001588.01.T01 | MTR_0036s0070 | 29.515 | 227 | 137 | 10 | 5 | 225 | 215 | 424 | 1.73e-18 | 83.6 |
| MsG0180001588.01.T01 | MTR_6g088760 | 28.718 | 195 | 124 | 7 | 5 | 192 | 218 | 404 | 4.05e-18 | 82.8 |
| MsG0180001588.01.T01 | MTR_5g012490 | 26.792 | 265 | 137 | 9 | 7 | 225 | 216 | 469 | 4.76e-18 | 82.4 |
| MsG0180001588.01.T01 | MTR_2g059490 | 30.396 | 227 | 144 | 10 | 7 | 225 | 188 | 408 | 6.56e-18 | 82.0 |
| MsG0180001588.01.T01 | MTR_5g038360 | 29.386 | 228 | 142 | 11 | 6 | 225 | 218 | 434 | 6.89e-18 | 82.0 |
| MsG0180001588.01.T01 | MTR_5g044570 | 27.632 | 228 | 146 | 8 | 5 | 225 | 194 | 409 | 1.12e-17 | 81.3 |
| MsG0180001588.01.T01 | MTR_2g059460 | 30.603 | 232 | 133 | 11 | 7 | 225 | 188 | 404 | 1.46e-17 | 80.9 |
| MsG0180001588.01.T01 | MTR_2g070430 | 30.901 | 233 | 137 | 8 | 7 | 223 | 227 | 451 | 2.57e-17 | 80.5 |
| MsG0180001588.01.T01 | MTR_2g063110 | 27.948 | 229 | 157 | 6 | 2 | 225 | 283 | 508 | 9.60e-17 | 79.0 |
| MsG0180001588.01.T01 | MTR_6g090290 | 29.279 | 222 | 140 | 8 | 13 | 225 | 221 | 434 | 1.07e-16 | 78.6 |
| MsG0180001588.01.T01 | MTR_4g109760 | 30.942 | 223 | 129 | 11 | 13 | 225 | 189 | 396 | 1.24e-16 | 78.2 |
| MsG0180001588.01.T01 | MTR_5g008150 | 28.755 | 233 | 138 | 10 | 7 | 225 | 192 | 410 | 4.31e-16 | 76.6 |
| MsG0180001588.01.T01 | MTR_3g068000 | 29.249 | 253 | 137 | 12 | 5 | 225 | 199 | 441 | 5.17e-15 | 73.6 |
| MsG0180001588.01.T01 | MTR_5g008070 | 28.767 | 219 | 137 | 9 | 15 | 225 | 217 | 424 | 8.15e-15 | 73.2 |
| MsG0180001588.01.T01 | MTR_5g008110 | 28.634 | 227 | 145 | 9 | 7 | 225 | 196 | 413 | 6.42e-14 | 70.5 |
| MsG0180001588.01.T01 | MTR_5g008090 | 27.706 | 231 | 143 | 8 | 7 | 225 | 94 | 312 | 6.52e-14 | 69.7 |
| MsG0180001588.01.T01 | MTR_5g077850 | 26.667 | 240 | 148 | 9 | 5 | 225 | 207 | 437 | 1.89e-13 | 68.9 |
| MsG0180001588.01.T01 | MTR_0024s0040 | 27.753 | 227 | 149 | 9 | 4 | 225 | 192 | 408 | 2.45e-13 | 68.6 |
| MsG0180001588.01.T01 | MTR_5g016260 | 25.424 | 236 | 149 | 9 | 5 | 225 | 208 | 431 | 8.10e-13 | 67.4 |
| MsG0180001588.01.T01 | MTR_5g016260 | 25.424 | 236 | 149 | 9 | 5 | 225 | 208 | 431 | 9.25e-13 | 67.4 |
| MsG0180001588.01.T01 | MTR_4g095270 | 24.153 | 236 | 152 | 8 | 5 | 225 | 200 | 423 | 6.09e-11 | 62.0 |
| MsG0180001588.01.T01 | MTR_4g095270 | 24.153 | 236 | 152 | 8 | 5 | 225 | 200 | 423 | 7.99e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001588.01.T01 | AT3G20015 | 75.714 | 210 | 51 | 0 | 16 | 225 | 261 | 470 | 3.57e-106 | 314 |
| MsG0180001588.01.T01 | AT3G18490 | 47.867 | 211 | 106 | 2 | 16 | 225 | 293 | 500 | 2.64e-66 | 213 |
| MsG0180001588.01.T01 | AT1G25510 | 46.193 | 197 | 105 | 1 | 29 | 225 | 288 | 483 | 1.94e-63 | 205 |
| MsG0180001588.01.T01 | AT3G61820 | 46.977 | 215 | 107 | 3 | 17 | 225 | 270 | 483 | 1.44e-57 | 189 |
| MsG0180001588.01.T01 | AT1G01300 | 48.341 | 211 | 106 | 3 | 17 | 225 | 275 | 484 | 8.30e-57 | 187 |
| MsG0180001588.01.T01 | AT5G10770 | 38.326 | 227 | 131 | 4 | 1 | 225 | 254 | 473 | 3.13e-40 | 144 |
| MsG0180001588.01.T01 | AT2G03200 | 34.034 | 238 | 137 | 9 | 2 | 225 | 227 | 458 | 1.34e-33 | 125 |
| MsG0180001588.01.T01 | AT1G09750 | 34.222 | 225 | 137 | 7 | 7 | 225 | 229 | 448 | 1.13e-32 | 123 |
| MsG0180001588.01.T01 | AT3G54400 | 36.681 | 229 | 128 | 8 | 5 | 225 | 205 | 424 | 1.16e-30 | 117 |
| MsG0180001588.01.T01 | AT3G25700 | 32.468 | 231 | 148 | 6 | 2 | 225 | 220 | 449 | 9.77e-30 | 115 |
| MsG0180001588.01.T01 | AT1G79720 | 32.719 | 217 | 131 | 5 | 16 | 225 | 274 | 482 | 1.52e-26 | 106 |
| MsG0180001588.01.T01 | AT5G10760 | 32.995 | 197 | 123 | 4 | 30 | 225 | 276 | 464 | 5.92e-26 | 105 |
| MsG0180001588.01.T01 | AT5G07030 | 32.367 | 207 | 119 | 6 | 30 | 225 | 258 | 454 | 1.98e-22 | 95.1 |
| MsG0180001588.01.T01 | AT5G33340 | 29.493 | 217 | 141 | 6 | 13 | 225 | 226 | 434 | 5.23e-21 | 90.9 |
| MsG0180001588.01.T01 | AT2G42980 | 28.000 | 225 | 148 | 7 | 13 | 225 | 302 | 524 | 6.80e-21 | 90.9 |
| MsG0180001588.01.T01 | AT3G59080 | 30.342 | 234 | 153 | 5 | 1 | 225 | 264 | 496 | 1.22e-20 | 90.1 |
| MsG0180001588.01.T01 | AT2G28010 | 28.571 | 224 | 147 | 6 | 6 | 225 | 177 | 391 | 1.41e-20 | 89.4 |
| MsG0180001588.01.T01 | AT3G59080 | 30.342 | 234 | 153 | 5 | 1 | 225 | 300 | 532 | 1.46e-20 | 90.1 |
| MsG0180001588.01.T01 | AT2G28040 | 29.646 | 226 | 143 | 8 | 4 | 225 | 177 | 390 | 3.04e-20 | 88.6 |
| MsG0180001588.01.T01 | AT2G28040 | 29.646 | 226 | 143 | 8 | 4 | 225 | 168 | 381 | 3.54e-20 | 88.2 |
| MsG0180001588.01.T01 | AT2G28030 | 28.571 | 224 | 147 | 6 | 6 | 225 | 173 | 387 | 3.41e-19 | 85.5 |
| MsG0180001588.01.T01 | AT4G16563 | 29.478 | 268 | 138 | 10 | 7 | 225 | 226 | 491 | 1.35e-17 | 81.3 |
| MsG0180001588.01.T01 | AT2G28220 | 28.070 | 228 | 146 | 7 | 4 | 225 | 182 | 397 | 5.08e-17 | 79.3 |
| MsG0180001588.01.T01 | AT1G64830 | 30.275 | 218 | 137 | 9 | 13 | 225 | 221 | 428 | 1.22e-16 | 78.6 |
| MsG0180001588.01.T01 | AT2G36670 | 28.431 | 204 | 127 | 8 | 7 | 202 | 176 | 368 | 3.76e-16 | 77.0 |
| MsG0180001588.01.T01 | AT2G36670 | 28.431 | 204 | 127 | 8 | 7 | 202 | 176 | 368 | 3.76e-16 | 77.0 |
| MsG0180001588.01.T01 | AT2G36670 | 26.872 | 227 | 147 | 8 | 7 | 225 | 247 | 462 | 4.28e-16 | 77.0 |
| MsG0180001588.01.T01 | AT2G36670 | 26.872 | 227 | 147 | 8 | 7 | 225 | 242 | 457 | 4.86e-16 | 76.6 |
| MsG0180001588.01.T01 | AT3G52500 | 27.530 | 247 | 147 | 7 | 6 | 225 | 226 | 467 | 8.35e-16 | 76.3 |
| MsG0180001588.01.T01 | AT3G12700 | 26.840 | 231 | 158 | 8 | 2 | 225 | 234 | 460 | 2.26e-14 | 72.0 |
| MsG0180001588.01.T01 | AT4G30040 | 30.415 | 217 | 129 | 9 | 7 | 212 | 214 | 419 | 4.83e-14 | 70.9 |
| MsG0180001588.01.T01 | AT2G39710 | 28.800 | 250 | 137 | 12 | 5 | 224 | 191 | 429 | 5.20e-14 | 70.9 |
| MsG0180001588.01.T01 | AT5G45120 | 25.794 | 252 | 150 | 10 | 7 | 225 | 231 | 478 | 7.49e-14 | 70.5 |
| MsG0180001588.01.T01 | AT2G28225 | 26.957 | 230 | 146 | 9 | 4 | 225 | 182 | 397 | 1.29e-13 | 69.7 |
| MsG0180001588.01.T01 | AT5G37540 | 26.778 | 239 | 153 | 7 | 5 | 225 | 204 | 438 | 2.87e-13 | 68.6 |
| MsG0180001588.01.T01 | AT2G35615 | 23.684 | 228 | 153 | 9 | 13 | 225 | 222 | 443 | 1.43e-12 | 66.6 |
| MsG0180001588.01.T01 | AT5G02190 | 28.175 | 252 | 140 | 12 | 5 | 225 | 201 | 442 | 1.53e-12 | 66.6 |
| MsG0180001588.01.T01 | AT1G05840 | 26.087 | 230 | 145 | 9 | 7 | 225 | 223 | 438 | 1.56e-12 | 66.6 |
| MsG0180001588.01.T01 | AT1G08210 | 28.070 | 228 | 143 | 10 | 7 | 225 | 273 | 488 | 2.40e-11 | 63.2 |
| MsG0180001588.01.T01 | AT1G08210 | 28.070 | 228 | 143 | 10 | 7 | 225 | 259 | 474 | 2.68e-11 | 62.8 |
| MsG0180001588.01.T01 | AT1G08210 | 28.070 | 228 | 143 | 10 | 7 | 225 | 225 | 440 | 3.00e-11 | 62.8 |
| MsG0180001588.01.T01 | AT1G31450 | 25.221 | 226 | 150 | 9 | 13 | 225 | 222 | 441 | 3.18e-11 | 62.8 |
| MsG0180001588.01.T01 | AT3G02740 | 25.551 | 227 | 150 | 9 | 7 | 225 | 149 | 364 | 4.32e-11 | 62.0 |
| MsG0180001588.01.T01 | AT3G02740 | 25.551 | 227 | 150 | 9 | 7 | 225 | 224 | 439 | 5.21e-11 | 62.0 |
| MsG0180001588.01.T01 | AT2G23945 | 27.861 | 201 | 119 | 9 | 6 | 194 | 225 | 411 | 8.33e-11 | 61.2 |
Find 69 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAATATTTGTTCAGATA+TGG | 0.161852 | 1:+23768235 | None:intergenic |
| TTCTACTACGTCTCACTTTC+GGG | 0.179528 | 1:-23768284 | MsG0180001588.01.T01:CDS |
| GCATTTGCTCCTTCACCTTC+TGG | 0.202156 | 1:-23767930 | MsG0180001588.01.T01:CDS |
| CCTTCTGGTCTTTCCATCAT+AGG | 0.241850 | 1:-23767915 | MsG0180001588.01.T01:CDS |
| ATCCAAAGGCTCCGCCGGTT+TGG | 0.265743 | 1:+23768420 | None:intergenic |
| CTTCTACTACGTCTCACTTT+CGG | 0.273039 | 1:-23768285 | MsG0180001588.01.T01:CDS |
| TCCAAAGGCTCCGCCGGTTT+GGG | 0.283928 | 1:+23768421 | None:intergenic |
| GGAATGTTTGTTGGAGCAGC+TGG | 0.314111 | 1:-23768494 | MsG0180001588.01.T01:CDS |
| GCCCAAACCGGCGGAGCCTT+TGG | 0.328588 | 1:-23768422 | MsG0180001588.01.T01:CDS |
| GTTTCTATCGATGGAACTAA+TGG | 0.337355 | 1:-23767867 | MsG0180001588.01.T01:CDS |
| GTTGGAGCAGCTGGGTTGTT+AGG | 0.347858 | 1:-23768485 | MsG0180001588.01.T01:CDS |
| CGCCGGTTTGGGCTCCCAAT+TGG | 0.356798 | 1:+23768432 | None:intergenic |
| TGAAATATTTGTTCAGATAT+GGG | 0.358837 | 1:+23768236 | None:intergenic |
| ATATTTCAGTTAACTGATAT+AGG | 0.421183 | 1:-23768221 | MsG0180001588.01.T01:CDS |
| TCACTTTCGGGTCTTGCAGT+TGG | 0.424557 | 1:-23768272 | MsG0180001588.01.T01:CDS |
| CTTTCGGGTCTTGCAGTTGG+AGG | 0.428746 | 1:-23768269 | MsG0180001588.01.T01:CDS |
| CAGTTAACTGATATAGGAAC+TGG | 0.429276 | 1:-23768215 | MsG0180001588.01.T01:CDS |
| TCATCCGGTTCACTCGAATT+CGG | 0.429351 | 1:-23768371 | MsG0180001588.01.T01:CDS |
| TGGAACGAGGGAATGTTTGT+TGG | 0.432846 | 1:-23768503 | None:intergenic |
| TTGCTGAATATTCCCTATGA+TGG | 0.435218 | 1:+23767902 | None:intergenic |
| GCAGCTGGGTTGTTAGGCCT+CGG | 0.440728 | 1:-23768479 | MsG0180001588.01.T01:CDS |
| TTGCACCTACGGGCATTGCT+TGG | 0.450316 | 1:+23768345 | None:intergenic |
| TGCATCGCGAAAAGCATTGT+AGG | 0.452930 | 1:+23768142 | None:intergenic |
| GGCCAATTGGGAGCCCAAAC+CGG | 0.456414 | 1:-23768434 | MsG0180001588.01.T01:CDS |
| TGTCTCATCTCTCGAGGCAC+TGG | 0.460971 | 1:-23768395 | MsG0180001588.01.T01:CDS |
| GGAATTCAAGTTTCTATCGA+TGG | 0.482938 | 1:-23767876 | MsG0180001588.01.T01:CDS |
| CTTCTGGTCTTTCCATCATA+GGG | 0.484726 | 1:-23767914 | MsG0180001588.01.T01:CDS |
| TGTTTGCTTCAACACACATT+GGG | 0.485439 | 1:+23767828 | None:intergenic |
| TTGATCCCGGCCGATGATGT+TGG | 0.486689 | 1:-23767966 | MsG0180001588.01.T01:CDS |
| AAATCTTAACCTTTCCTGCC+AGG | 0.486922 | 1:-23767995 | MsG0180001588.01.T01:CDS |
| TCTCGAGGCACTGGATCATC+CGG | 0.493723 | 1:-23768386 | MsG0180001588.01.T01:CDS |
| AGTGAGACGTAGTAGAAGCT+AGG | 0.502354 | 1:+23768290 | None:intergenic |
| AGTAGAAGCTAGGGTAGAAC+GGG | 0.505044 | 1:+23768300 | None:intergenic |
| GGGTTGTTAGGCCTCGGAGG+TGG | 0.505394 | 1:-23768473 | MsG0180001588.01.T01:CDS |
| GCGTCCGAATTCGAGTGAAC+CGG | 0.505443 | 1:+23768367 | None:intergenic |
| GTGAGACGTAGTAGAAGCTA+GGG | 0.505740 | 1:+23768291 | None:intergenic |
| AGGAACCCACATTGCACCTA+CGG | 0.516231 | 1:+23768334 | None:intergenic |
| AAAGTTCCAACATCATCGGC+CGG | 0.529607 | 1:+23767960 | None:intergenic |
| ACAGTATCCAAAGGCTCCGC+CGG | 0.535096 | 1:+23768415 | None:intergenic |
| GGAACCCACATTGCACCTAC+GGG | 0.543677 | 1:+23768335 | None:intergenic |
| GAATGTTTGTTGGAGCAGCT+GGG | 0.555216 | 1:-23768493 | MsG0180001588.01.T01:CDS |
| GACACGTGTTATGACTTGAA+CGG | 0.559620 | 1:-23768068 | MsG0180001588.01.T01:CDS |
| TAACCTCGTAATGGCTGTGC+CGG | 0.562288 | 1:+23768175 | None:intergenic |
| TAGTAGAAGCTAGGGTAGAA+CGG | 0.569534 | 1:+23768299 | None:intergenic |
| AACAGTAGGTAACCTCGTAA+TGG | 0.569664 | 1:+23768166 | None:intergenic |
| ATGTTTGCTTCAACACACAT+TGG | 0.570489 | 1:+23767827 | None:intergenic |
| AAGTTCCAACATCATCGGCC+GGG | 0.575288 | 1:+23767961 | None:intergenic |
| ACAGAAAGTTCCAACATCAT+CGG | 0.592640 | 1:+23767956 | None:intergenic |
| GAAATATTTGTTCAGATATG+GGG | 0.592882 | 1:+23768237 | None:intergenic |
| AGGAACTGGAGGAGTTGTCA+TGG | 0.595896 | 1:-23768201 | MsG0180001588.01.T01:CDS |
| ATAGGGAATATTCAGCAAGA+AGG | 0.599831 | 1:-23767897 | MsG0180001588.01.T01:CDS |
| AATTGGCCCACAAAAGACAT+AGG | 0.600500 | 1:+23768449 | None:intergenic |
| AAAGCATTGTAGGCAACAGT+AGG | 0.603981 | 1:+23768152 | None:intergenic |
| GGAGGAGTTGTCATGGACAC+CGG | 0.609345 | 1:-23768194 | MsG0180001588.01.T01:CDS |
| CAATGCCCGTAGGTGCAATG+TGG | 0.615447 | 1:-23768340 | MsG0180001588.01.T01:CDS |
| AATGCCCGTAGGTGCAATGT+GGG | 0.625127 | 1:-23768339 | MsG0180001588.01.T01:CDS |
| ATGGAAAGACCAGAAGGTGA+AGG | 0.625165 | 1:+23767921 | None:intergenic |
| GGATACTGTCTCATCTCTCG+AGG | 0.632068 | 1:-23768401 | MsG0180001588.01.T01:CDS |
| CGACACTGTTGGAACTCGAA+CGG | 0.632988 | 1:+23768037 | None:intergenic |
| TTAACTGATATAGGAACTGG+AGG | 0.635628 | 1:-23768212 | MsG0180001588.01.T01:CDS |
| GGACGCCAAGCAATGCCCGT+AGG | 0.637191 | 1:-23768350 | MsG0180001588.01.T01:CDS |
| GCTGGGTTGTTAGGCCTCGG+AGG | 0.647032 | 1:-23768476 | MsG0180001588.01.T01:CDS |
| ATAGAAACTTTGGGAGCACG+TGG | 0.650147 | 1:+23768095 | None:intergenic |
| CCTATGATGGAAAGACCAGA+AGG | 0.651297 | 1:+23767915 | None:intergenic |
| CAATTGGGAGCCCAAACCGG+CGG | 0.653313 | 1:-23768431 | MsG0180001588.01.T01:CDS |
| TAGAACGGGTTATGAATGAG+AGG | 0.671064 | 1:+23768314 | None:intergenic |
| AGAGATGAGACAGTATCCAA+AGG | 0.682200 | 1:+23768406 | None:intergenic |
| AAGACATAGGTCCACCTCCG+AGG | 0.695349 | 1:+23768462 | None:intergenic |
| ACACCGGCACAGCCATTACG+AGG | 0.695906 | 1:-23768178 | MsG0180001588.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTCAGTTAACTGATAT+AGG | - | Chr1:23768106-23768125 | MsG0180001588.01.T01:CDS | 20.0% |
| !! | TGAAATATTTGTTCAGATAT+GGG | + | Chr1:23768094-23768113 | None:intergenic | 20.0% |
| ! | CTGAAATATTTGTTCAGATA+TGG | + | Chr1:23768095-23768114 | None:intergenic | 25.0% |
| ! | GAAATATTTGTTCAGATATG+GGG | + | Chr1:23768093-23768112 | None:intergenic | 25.0% |
| ! | GTGTCAAAAATAGAAACTTT+GGG | + | Chr1:23768244-23768263 | None:intergenic | 25.0% |
| CGTGTCAAAAATAGAAACTT+TGG | + | Chr1:23768245-23768264 | None:intergenic | 30.0% | |
| GAAAAATAAAACGACACTGT+TGG | + | Chr1:23768304-23768323 | None:intergenic | 30.0% | |
| !!! | ACAGTGTCGTTTTATTTTTC+AGG | - | Chr1:23768304-23768323 | MsG0180001588.01.T01:CDS | 30.0% |
| !!! | ACTAATGGTTTTGTAGGATT+TGG | - | Chr1:23768475-23768494 | MsG0180001588.01.T01:CDS | 30.0% |
| !!! | AGTGTCGTTTTATTTTTCAG+GGG | - | Chr1:23768306-23768325 | MsG0180001588.01.T01:CDS | 30.0% |
| !!! | CAGTGTCGTTTTATTTTTCA+GGG | - | Chr1:23768305-23768324 | MsG0180001588.01.T01:CDS | 30.0% |
| ACAGAAAGTTCCAACATCAT+CGG | + | Chr1:23768374-23768393 | None:intergenic | 35.0% | |
| ATAGGGAATATTCAGCAAGA+AGG | - | Chr1:23768430-23768449 | MsG0180001588.01.T01:CDS | 35.0% | |
| CAGTTAACTGATATAGGAAC+TGG | - | Chr1:23768112-23768131 | MsG0180001588.01.T01:CDS | 35.0% | |
| GTTTCTATCGATGGAACTAA+TGG | - | Chr1:23768460-23768479 | MsG0180001588.01.T01:CDS | 35.0% | |
| TTAACTGATATAGGAACTGG+AGG | - | Chr1:23768115-23768134 | MsG0180001588.01.T01:CDS | 35.0% | |
| TTGCTGAATATTCCCTATGA+TGG | + | Chr1:23768428-23768447 | None:intergenic | 35.0% | |
| ! | GGAATTCAAGTTTCTATCGA+TGG | - | Chr1:23768451-23768470 | MsG0180001588.01.T01:CDS | 35.0% |
| !!! | GATGGAACTAATGGTTTTGT+AGG | - | Chr1:23768469-23768488 | MsG0180001588.01.T01:CDS | 35.0% |
| !!! | GTGTCGTTTTATTTTTCAGG+GGG | - | Chr1:23768307-23768326 | MsG0180001588.01.T01:CDS | 35.0% |
| AAATCTTAACCTTTCCTGCC+AGG | - | Chr1:23768332-23768351 | MsG0180001588.01.T01:CDS | 40.0% | |
| AACAGTAGGTAACCTCGTAA+TGG | + | Chr1:23768164-23768183 | None:intergenic | 40.0% | |
| AATTGGCCCACAAAAGACAT+AGG | + | Chr1:23767881-23767900 | None:intergenic | 40.0% | |
| AGAGATGAGACAGTATCCAA+AGG | + | Chr1:23767924-23767943 | None:intergenic | 40.0% | |
| CAAAAAATTCCTGGCAGGAA+AGG | + | Chr1:23768344-23768363 | None:intergenic | 40.0% | |
| CTTCTACTACGTCTCACTTT+CGG | - | Chr1:23768042-23768061 | MsG0180001588.01.T01:CDS | 40.0% | |
| GACACGTGTTATGACTTGAA+CGG | - | Chr1:23768259-23768278 | MsG0180001588.01.T01:CDS | 40.0% | |
| TAGTAGAAGCTAGGGTAGAA+CGG | + | Chr1:23768031-23768050 | None:intergenic | 40.0% | |
| TTCTACTACGTCTCACTTTC+GGG | - | Chr1:23768043-23768062 | MsG0180001588.01.T01:CDS | 40.0% | |
| ! | ATGTCTTTTGTGGGCCAATT+GGG | - | Chr1:23767881-23767900 | MsG0180001588.01.T01:CDS | 40.0% |
| ! | CTTCTGGTCTTTCCATCATA+GGG | - | Chr1:23768413-23768432 | MsG0180001588.01.T01:CDS | 40.0% |
| ! | TATGTCTTTTGTGGGCCAAT+TGG | - | Chr1:23767880-23767899 | MsG0180001588.01.T01:CDS | 40.0% |
| !! | AAAGCATTGTAGGCAACAGT+AGG | + | Chr1:23768178-23768197 | None:intergenic | 40.0% |
| !! | TAGAACGGGTTATGAATGAG+AGG | + | Chr1:23768016-23768035 | None:intergenic | 40.0% |
| !!! | TGCCAGGAATTTTTTGATCC+CGG | - | Chr1:23768348-23768367 | MsG0180001588.01.T01:CDS | 40.0% |
| AAAGTTCCAACATCATCGGC+CGG | + | Chr1:23768370-23768389 | None:intergenic | 45.0% | |
| AGTAGAAGCTAGGGTAGAAC+GGG | + | Chr1:23768030-23768049 | None:intergenic | 45.0% | |
| AGTGAGACGTAGTAGAAGCT+AGG | + | Chr1:23768040-23768059 | None:intergenic | 45.0% | |
| ATGGAAAGACCAGAAGGTGA+AGG | + | Chr1:23768409-23768428 | None:intergenic | 45.0% | |
| GGGATCAAAAAATTCCTGGC+AGG | + | Chr1:23768349-23768368 | None:intergenic | 45.0% | |
| GTGAGACGTAGTAGAAGCTA+GGG | + | Chr1:23768039-23768058 | None:intergenic | 45.0% | |
| TCATCCGGTTCACTCGAATT+CGG | - | Chr1:23767956-23767975 | MsG0180001588.01.T01:CDS | 45.0% | |
| ! | AGGTGGACCTATGTCTTTTG+TGG | - | Chr1:23767871-23767890 | MsG0180001588.01.T01:CDS | 45.0% |
| ! | ATAGAAACTTTGGGAGCACG+TGG | + | Chr1:23768235-23768254 | None:intergenic | 45.0% |
| ! | CCTATGATGGAAAGACCAGA+AGG | + | Chr1:23768415-23768434 | None:intergenic | 45.0% |
| ! | CCTTCTGGTCTTTCCATCAT+AGG | - | Chr1:23768412-23768431 | MsG0180001588.01.T01:CDS | 45.0% |
| ! | GGTGGACCTATGTCTTTTGT+GGG | - | Chr1:23767872-23767891 | MsG0180001588.01.T01:CDS | 45.0% |
| !! | TGCATCGCGAAAAGCATTGT+AGG | + | Chr1:23768188-23768207 | None:intergenic | 45.0% |
| AAGTTCCAACATCATCGGCC+GGG | + | Chr1:23768369-23768388 | None:intergenic | 50.0% | |
| AATGCCCGTAGGTGCAATGT+GGG | - | Chr1:23767988-23768007 | MsG0180001588.01.T01:CDS | 50.0% | |
| AGGAACCCACATTGCACCTA+CGG | + | Chr1:23767996-23768015 | None:intergenic | 50.0% | |
| AGGAACTGGAGGAGTTGTCA+TGG | - | Chr1:23768126-23768145 | MsG0180001588.01.T01:CDS | 50.0% | |
| CGACACTGTTGGAACTCGAA+CGG | + | Chr1:23768293-23768312 | None:intergenic | 50.0% | |
| GCATTTGCTCCTTCACCTTC+TGG | - | Chr1:23768397-23768416 | MsG0180001588.01.T01:CDS | 50.0% | |
| GGATACTGTCTCATCTCTCG+AGG | - | Chr1:23767926-23767945 | MsG0180001588.01.T01:CDS | 50.0% | |
| GGCCGGGATCAAAAAATTCC+TGG | + | Chr1:23768353-23768372 | None:intergenic | 50.0% | |
| TAACCTCGTAATGGCTGTGC+CGG | + | Chr1:23768155-23768174 | None:intergenic | 50.0% | |
| ! | TCACTTTCGGGTCTTGCAGT+TGG | - | Chr1:23768055-23768074 | MsG0180001588.01.T01:CDS | 50.0% |
| AAGACATAGGTCCACCTCCG+AGG | + | Chr1:23767868-23767887 | None:intergenic | 55.0% | |
| ACAGTATCCAAAGGCTCCGC+CGG | + | Chr1:23767915-23767934 | None:intergenic | 55.0% | |
| CAATGCCCGTAGGTGCAATG+TGG | - | Chr1:23767987-23768006 | MsG0180001588.01.T01:CDS | 55.0% | |
| GCGTCCGAATTCGAGTGAAC+CGG | + | Chr1:23767963-23767982 | None:intergenic | 55.0% | |
| GGAACCCACATTGCACCTAC+GGG | + | Chr1:23767995-23768014 | None:intergenic | 55.0% | |
| GGAGGAGTTGTCATGGACAC+CGG | - | Chr1:23768133-23768152 | MsG0180001588.01.T01:CDS | 55.0% | |
| GTTGGAGCAGCTGGGTTGTT+AGG | - | Chr1:23767842-23767861 | MsG0180001588.01.T01:CDS | 55.0% | |
| TGTCTCATCTCTCGAGGCAC+TGG | - | Chr1:23767932-23767951 | MsG0180001588.01.T01:CDS | 55.0% | |
| TTGATCCCGGCCGATGATGT+TGG | - | Chr1:23768361-23768380 | MsG0180001588.01.T01:CDS | 55.0% | |
| ! | CTTTCGGGTCTTGCAGTTGG+AGG | - | Chr1:23768058-23768077 | MsG0180001588.01.T01:CDS | 55.0% |
| ! | TTGCACCTACGGGCATTGCT+TGG | + | Chr1:23767985-23768004 | None:intergenic | 55.0% |
| !! | TCTCGAGGCACTGGATCATC+CGG | - | Chr1:23767941-23767960 | MsG0180001588.01.T01:CDS | 55.0% |
| ACACCGGCACAGCCATTACG+AGG | - | Chr1:23768149-23768168 | MsG0180001588.01.T01:CDS | 60.0% | |
| CAATTGGGAGCCCAAACCGG+CGG | - | Chr1:23767896-23767915 | MsG0180001588.01.T01:CDS | 60.0% | |
| GCAGCTGGGTTGTTAGGCCT+CGG | - | Chr1:23767848-23767867 | MsG0180001588.01.T01:CDS | 60.0% | |
| GGCCAATTGGGAGCCCAAAC+CGG | - | Chr1:23767893-23767912 | MsG0180001588.01.T01:CDS | 60.0% | |
| ! | ATCCAAAGGCTCCGCCGGTT+TGG | + | Chr1:23767910-23767929 | None:intergenic | 60.0% |
| !! | TCCAAAGGCTCCGCCGGTTT+GGG | + | Chr1:23767909-23767928 | None:intergenic | 60.0% |
| GCTGGGTTGTTAGGCCTCGG+AGG | - | Chr1:23767851-23767870 | MsG0180001588.01.T01:CDS | 65.0% | |
| GGACGCCAAGCAATGCCCGT+AGG | - | Chr1:23767977-23767996 | MsG0180001588.01.T01:CDS | 65.0% | |
| GGGTTGTTAGGCCTCGGAGG+TGG | - | Chr1:23767854-23767873 | MsG0180001588.01.T01:CDS | 65.0% | |
| !! | CGCCGGTTTGGGCTCCCAAT+TGG | + | Chr1:23767898-23767917 | None:intergenic | 65.0% |
| GCCCAAACCGGCGGAGCCTT+TGG | - | Chr1:23767905-23767924 | MsG0180001588.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 23767836 | 23768513 | 23767836 | ID=MsG0180001588.01;Name=MsG0180001588.01 |
| Chr1 | mRNA | 23767836 | 23768513 | 23767836 | ID=MsG0180001588.01.T01;Parent=MsG0180001588.01;Name=MsG0180001588.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|225 |
| Chr1 | exon | 23767836 | 23768513 | 23767836 | ID=MsG0180001588.01.T01:exon:18186;Parent=MsG0180001588.01.T01 |
| Chr1 | CDS | 23767836 | 23768513 | 23767836 | ID=MsG0180001588.01.T01:cds;Parent=MsG0180001588.01.T01 |
| Gene Sequence |
| Protein sequence |
