Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016936.01.T01 | XP_003602742.1 | 89.384 | 292 | 10 | 2 | 1 | 291 | 1 | 272 | 0 | 518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016936.01.T01 | Q55CU8 | 32.889 | 225 | 124 | 5 | 66 | 283 | 73 | 277 | 4.18E-25 | 105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016936.01.T01 | G7J392 | 89.384 | 292 | 10 | 2 | 1 | 291 | 1 | 272 | 0.0 | 518 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048273.01 | MsG0380016936.01 | 0.818559 | 1.840307e-52 | 1.382114e-49 |
| MsG0080048274.01 | MsG0380016936.01 | 0.807228 | 5.601508e-50 | 3.102928e-47 |
| MsG0080048887.01 | MsG0380016936.01 | 0.819565 | 1.086213e-52 | 8.388652e-50 |
| MsG0080049024.01 | MsG0380016936.01 | 0.810773 | 9.757158e-51 | 5.934418e-48 |
| MsG0080049129.01 | MsG0380016936.01 | 0.824482 | 7.881054e-54 | 6.989443e-51 |
| MsG0180000017.01 | MsG0380016936.01 | 0.800647 | 1.306635e-48 | 6.116394e-46 |
| MsG0180000423.01 | MsG0380016936.01 | 0.800078 | 1.705751e-48 | 7.870291e-46 |
| MsG0180000489.01 | MsG0380016936.01 | 0.805524 | 1.280297e-49 | 6.788298e-47 |
| MsG0180000490.01 | MsG0380016936.01 | 0.840647 | 7.664088e-58 | 1.098765e-54 |
| MsG0180000491.01 | MsG0380016936.01 | 0.829552 | 4.830571e-55 | 4.960148e-52 |
| MsG0180000843.01 | MsG0380016936.01 | 0.812922 | 3.322894e-51 | 2.139743e-48 |
| MsG0180000976.01 | MsG0380016936.01 | 0.803013 | 4.267853e-49 | 2.121331e-46 |
| MsG0180001656.01 | MsG0380016936.01 | 0.825932 | 3.579704e-54 | 3.309293e-51 |
| MsG0180003196.01 | MsG0380016936.01 | 0.801096 | 1.058025e-48 | 5.009665e-46 |
| MsG0180003352.01 | MsG0380016936.01 | 0.844295 | 8.261333e-59 | 1.327758e-55 |
| MsG0180003617.01 | MsG0380016936.01 | 0.804501 | 2.096018e-49 | 1.082404e-46 |
| MsG0180003933.01 | MsG0380016936.01 | 0.805515 | 1.286373e-49 | 6.818743e-47 |
| MsG0180004504.01 | MsG0380016936.01 | 0.811321 | 7.423529e-51 | 4.580772e-48 |
| MsG0180004662.01 | MsG0380016936.01 | 0.828464 | 8.858695e-55 | 8.812089e-52 |
| MsG0180005416.01 | MsG0380016936.01 | 0.831158 | 1.955540e-55 | 2.104487e-52 |
| MsG0180005545.01 | MsG0380016936.01 | 0.873741 | 1.162386e-67 | 5.099918e-64 |
| MsG0180005555.01 | MsG0380016936.01 | 0.853186 | 2.822359e-61 | 6.046955e-58 |
| MsG0180005556.01 | MsG0380016936.01 | 0.874525 | 6.310840e-68 | 2.849664e-64 |
| MsG0180005557.01 | MsG0380016936.01 | 0.866969 | 1.932158e-65 | 6.635049e-62 |
| MsG0180005558.01 | MsG0380016936.01 | 0.848836 | 4.753479e-60 | 8.837184e-57 |
| MsG0180005561.01 | MsG0380016936.01 | 0.820102 | 8.191089e-53 | 6.421917e-50 |
| MsG0180005672.01 | MsG0380016936.01 | 0.817356 | 3.440669e-52 | 2.500020e-49 |
| MsG0180005767.01 | MsG0380016936.01 | 0.811015 | 8.649154e-51 | 5.294952e-48 |
| MsG0180005854.01 | MsG0380016936.01 | 0.808450 | 3.079176e-50 | 1.761229e-47 |
| MsG0180005898.01 | MsG0380016936.01 | 0.834195 | 3.448900e-56 | 4.062706e-53 |
| MsG0180006253.01 | MsG0380016936.01 | -0.844205 | 8.731340e-59 | 1.399436e-55 |
| MsG0280006319.01 | MsG0380016936.01 | 0.878241 | 3.293718e-69 | 1.707340e-65 |
| MsG0280006402.01 | MsG0380016936.01 | 0.844841 | 5.887587e-59 | 9.626589e-56 |
| MsG0280010803.01 | MsG0380016936.01 | 0.816391 | 5.664606e-52 | 4.008723e-49 |
| MsG0280011189.01 | MsG0380016936.01 | 0.805637 | 1.212625e-49 | 6.448416e-47 |
| MsG0380011632.01 | MsG0380016936.01 | 0.812710 | 3.696603e-51 | 2.367266e-48 |
| MsG0380011662.01 | MsG0380016936.01 | 0.831174 | 1.938890e-55 | 2.087524e-52 |
| MsG0380013177.01 | MsG0380016936.01 | 0.828601 | 8.213295e-55 | 8.202309e-52 |
| MsG0380013501.01 | MsG0380016936.01 | 0.813221 | 2.856252e-51 | 1.854133e-48 |
| MsG0380014144.01 | MsG0380016936.01 | 0.822655 | 2.109038e-53 | 1.776298e-50 |
| MsG0380014183.01 | MsG0380016936.01 | 0.860329 | 2.229002e-63 | 6.069578e-60 |
| MsG0380014231.01 | MsG0380016936.01 | 0.825043 | 5.813728e-54 | 5.240145e-51 |
| MsG0380014646.01 | MsG0380016936.01 | 0.842302 | 2.809721e-58 | 4.242065e-55 |
| MsG0380014750.01 | MsG0380016936.01 | 0.813991 | 1.933989e-51 | 1.282006e-48 |
| MsG0380015744.01 | MsG0380016936.01 | 0.832534 | 8.950787e-56 | 1.003308e-52 |
| MsG0380015974.01 | MsG0380016936.01 | 0.803151 | 3.997882e-49 | 1.994265e-46 |
| MsG0380016066.01 | MsG0380016936.01 | 0.841694 | 4.068433e-58 | 6.025188e-55 |
| MsG0380016151.01 | MsG0380016936.01 | 0.849619 | 2.879086e-60 | 5.490365e-57 |
| MsG0380016354.01 | MsG0380016936.01 | 0.818434 | 1.964061e-52 | 1.470139e-49 |
| MsG0380016456.01 | MsG0380016936.01 | 0.811408 | 7.106341e-51 | 4.395533e-48 |
| MsG0380016542.01 | MsG0380016936.01 | 0.815017 | 1.146499e-51 | 7.814116e-49 |
| MsG0380016623.01 | MsG0380016936.01 | 0.805957 | 1.038786e-49 | 5.569596e-47 |
| MsG0380016936.01 | MsG0380016997.01 | 0.828064 | 1.106455e-54 | 1.087876e-51 |
| MsG0380016936.01 | MsG0380017353.01 | 0.844256 | 8.463558e-59 | 1.358470e-55 |
| MsG0380016936.01 | MsG0380017532.01 | 0.839110 | 1.927374e-57 | 2.634886e-54 |
| MsG0380016936.01 | MsG0380017620.01 | 0.801667 | 8.081317e-49 | 3.881648e-46 |
| MsG0380016936.01 | MsG0380017666.01 | -0.842072 | 3.233115e-58 | 4.845913e-55 |
| MsG0380016936.01 | MsG0380017918.01 | 0.837131 | 6.229419e-57 | 8.015571e-54 |
| MsG0380016936.01 | MsG0480018328.01 | 0.813290 | 2.758604e-51 | 1.794215e-48 |
| MsG0380016936.01 | MsG0480018330.01 | 0.803843 | 2.872315e-49 | 1.458578e-46 |
| MsG0380016936.01 | MsG0480018345.01 | 0.803243 | 3.825999e-49 | 1.913015e-46 |
| MsG0380016936.01 | MsG0480018629.01 | 0.858180 | 9.831615e-63 | 2.487561e-59 |
| MsG0380016936.01 | MsG0480018631.01 | 0.827847 | 1.247555e-54 | 1.218823e-51 |
| MsG0380016936.01 | MsG0480018658.01 | 0.806937 | 6.454067e-50 | 3.548273e-47 |
| MsG0380016936.01 | MsG0480018905.01 | 0.800225 | 1.592612e-48 | 7.375646e-46 |
| MsG0380016936.01 | MsG0480019573.01 | 0.803023 | 4.247499e-49 | 2.111773e-46 |
| MsG0380016936.01 | MsG0480019752.01 | 0.800989 | 1.112287e-48 | 5.252507e-46 |
| MsG0380016936.01 | MsG0480019974.01 | 0.802143 | 6.451860e-49 | 3.136734e-46 |
| MsG0380016936.01 | MsG0480020027.01 | 0.859951 | 2.898690e-63 | 7.792140e-60 |
| MsG0380016936.01 | MsG0480020473.01 | 0.806578 | 7.686367e-50 | 4.186767e-47 |
| MsG0380016936.01 | MsG0480020704.01 | 0.812710 | 3.697020e-51 | 2.367495e-48 |
| MsG0380016936.01 | MsG0480021151.01 | 0.805303 | 1.424687e-49 | 7.511128e-47 |
| MsG0380016936.01 | MsG0480021497.01 | 0.805232 | 1.474351e-49 | 7.758860e-47 |
| MsG0380016936.01 | MsG0480021999.01 | 0.833857 | 4.189850e-56 | 4.886559e-53 |
| MsG0380016936.01 | MsG0480022002.01 | 0.806610 | 7.565011e-50 | 4.124074e-47 |
| MsG0380016936.01 | MsG0480022664.01 | 0.822005 | 2.984598e-53 | 2.467399e-50 |
| MsG0380016936.01 | MsG0480022805.01 | 0.852429 | 4.642347e-61 | 9.697625e-58 |
| MsG0380016936.01 | MsG0480023104.01 | 0.820481 | 6.705717e-53 | 5.312023e-50 |
| MsG0380016936.01 | MsG0480023169.01 | 0.801116 | 1.047743e-48 | 4.963394e-46 |
| MsG0380016936.01 | MsG0480023173.01 | 0.818505 | 1.892715e-52 | 1.419394e-49 |
| MsG0380016936.01 | MsG0480023466.01 | 0.831282 | 1.823027e-55 | 1.969056e-52 |
| MsG0380016936.01 | MsG0480023502.01 | 0.822598 | 2.174479e-53 | 1.828558e-50 |
| MsG0380016936.01 | MsG0480023616.01 | 0.813877 | 2.048539e-51 | 1.353842e-48 |
| MsG0380016936.01 | MsG0580024201.01 | 0.808660 | 2.777512e-50 | 1.597244e-47 |
| MsG0380016936.01 | MsG0580024386.01 | 0.880243 | 6.442329e-70 | 3.602237e-66 |
| MsG0380016936.01 | MsG0580024471.01 | 0.856672 | 2.745166e-62 | 6.601996e-59 |
| MsG0380016936.01 | MsG0580024567.01 | 0.843729 | 1.171149e-58 | 1.849245e-55 |
| MsG0380016936.01 | MsG0580024763.01 | 0.873234 | 1.722241e-67 | 7.419686e-64 |
| MsG0380016936.01 | MsG0580024764.01 | 0.858233 | 9.481013e-63 | 2.403047e-59 |
| MsG0380016936.01 | MsG0580024766.01 | 0.830894 | 2.270873e-55 | 2.424978e-52 |
| MsG0380016936.01 | MsG0580024768.01 | 0.815040 | 1.132964e-51 | 7.726748e-49 |
| MsG0380016936.01 | MsG0580024944.01 | 0.814084 | 1.844564e-51 | 1.225843e-48 |
| MsG0380016936.01 | MsG0580025252.01 | 0.808218 | 3.449569e-50 | 1.961084e-47 |
| MsG0380016936.01 | MsG0580025301.01 | 0.801705 | 7.939373e-49 | 3.817055e-46 |
| MsG0380016936.01 | MsG0580025317.01 | 0.802693 | 4.969242e-49 | 2.450079e-46 |
| MsG0380016936.01 | MsG0580026050.01 | 0.802366 | 5.805999e-49 | 2.838967e-46 |
| MsG0380016936.01 | MsG0580028092.01 | 0.811079 | 8.376365e-51 | 5.136185e-48 |
| MsG0380016936.01 | MsG0580028495.01 | 0.831069 | 2.057410e-55 | 2.208317e-52 |
| MsG0380016936.01 | MsG0580028925.01 | 0.812706 | 3.704065e-51 | 2.371791e-48 |
| MsG0380016936.01 | MsG0580029719.01 | 0.809777 | 1.600011e-50 | 9.479627e-48 |
| MsG0380016936.01 | MsG0580030063.01 | 0.886806 | 2.481034e-72 | 1.798468e-68 |
| MsG0380016936.01 | MsG0680030902.01 | 0.821852 | 3.238221e-53 | 2.665646e-50 |
| MsG0380016936.01 | MsG0680031204.01 | 0.821973 | 3.036057e-53 | 2.507593e-50 |
| MsG0380016936.01 | MsG0680031356.01 | -0.800614 | 1.326828e-48 | 6.205771e-46 |
| MsG0380016936.01 | MsG0680032245.01 | 0.814644 | 1.386953e-51 | 9.358449e-49 |
| MsG0380016936.01 | MsG0680032769.01 | 0.805971 | 1.031841e-49 | 5.534313e-47 |
| MsG0380016936.01 | MsG0680034431.01 | 0.802604 | 5.184871e-49 | 2.550542e-46 |
| MsG0380016936.01 | MsG0680034724.01 | 0.835251 | 1.870714e-56 | 2.275046e-53 |
| MsG0380016936.01 | MsG0680034729.01 | 0.804908 | 1.723001e-49 | 8.993250e-47 |
| MsG0380016936.01 | MsG0680034730.01 | 0.818136 | 2.294590e-52 | 1.703327e-49 |
| MsG0380016936.01 | MsG0680035612.01 | 0.839715 | 1.342241e-57 | 1.869367e-54 |
| MsG0380016936.01 | MsG0680035664.01 | 0.844555 | 7.030113e-59 | 1.139208e-55 |
| MsG0380016936.01 | MsG0680035665.01 | 0.822623 | 2.145344e-53 | 1.805320e-50 |
| MsG0380016936.01 | MsG0780036008.01 | 0.800275 | 1.555433e-48 | 7.212663e-46 |
| MsG0380016936.01 | MsG0780036060.01 | -0.820599 | 6.298920e-53 | 5.005885e-50 |
| MsG0380016936.01 | MsG0780036583.01 | 0.803311 | 3.703771e-49 | 1.855100e-46 |
| MsG0380016936.01 | MsG0780037944.01 | 0.820536 | 6.512168e-53 | 5.166762e-50 |
| MsG0380016936.01 | MsG0780038416.01 | 0.800269 | 1.560029e-48 | 7.232855e-46 |
| MsG0380016936.01 | MsG0780038848.01 | 0.801565 | 8.478782e-49 | 4.062144e-46 |
| MsG0380016936.01 | MsG0780039805.01 | 0.866413 | 2.903408e-65 | 9.777016e-62 |
| MsG0380016936.01 | MsG0780039955.01 | 0.815687 | 8.135427e-52 | 5.647633e-49 |
| MsG0380016936.01 | MsG0780040154.01 | 0.807666 | 4.521466e-50 | 2.533316e-47 |
| MsG0380016936.01 | MsG0780040155.01 | 0.816474 | 5.428174e-52 | 3.850013e-49 |
| MsG0380016936.01 | MsG0780040319.01 | 0.808973 | 2.380041e-50 | 1.380122e-47 |
| MsG0380016936.01 | MsG0780040459.01 | -0.807767 | 4.304539e-50 | 2.418103e-47 |
| MsG0380016936.01 | MsG0780040670.01 | -0.812466 | 4.181044e-51 | 2.660509e-48 |
| MsG0380016936.01 | MsG0780040849.01 | 0.800831 | 1.198383e-48 | 5.635945e-46 |
| MsG0380016936.01 | MsG0780041126.01 | 0.826835 | 2.181493e-54 | 2.069139e-51 |
| MsG0380016936.01 | MsG0880041908.01 | 0.812936 | 3.298624e-51 | 2.124947e-48 |
| MsG0380016936.01 | MsG0880042030.01 | 0.827557 | 1.464732e-54 | 1.418869e-51 |
| MsG0380016936.01 | MsG0880042256.01 | 0.800437 | 1.442003e-48 | 6.714295e-46 |
| MsG0380016936.01 | MsG0880042876.01 | 0.809227 | 2.099881e-50 | 1.226027e-47 |
| MsG0380016936.01 | MsG0880043235.01 | 0.802017 | 6.849529e-49 | 3.319398e-46 |
| MsG0380016936.01 | MsG0880043515.01 | 0.827291 | 1.696980e-54 | 1.631314e-51 |
| MsG0380016936.01 | MsG0880044105.01 | 0.847489 | 1.119987e-59 | 1.993961e-56 |
| MsG0380016936.01 | MsG0880044317.01 | 0.846553 | 2.020810e-59 | 3.491212e-56 |
| MsG0380016936.01 | MsG0880044318.01 | 0.828321 | 9.594357e-55 | 9.503443e-52 |
| MsG0380016936.01 | MsG0880044411.01 | 0.814476 | 1.511328e-51 | 1.015164e-48 |
| MsG0380016936.01 | MsG0880044453.01 | 0.820922 | 5.310614e-53 | 4.259018e-50 |
| MsG0380016936.01 | MsG0880044548.01 | 0.816781 | 4.634232e-52 | 3.314730e-49 |
| MsG0380016936.01 | MsG0880044834.01 | 0.880554 | 4.987296e-70 | 2.824335e-66 |
| MsG0380016936.01 | MsG0880044884.01 | 0.800273 | 1.557268e-48 | 7.220714e-46 |
| MsG0380016936.01 | MsG0880045412.01 | 0.807370 | 5.225637e-50 | 2.905400e-47 |
| MsG0380016936.01 | MsG0880046324.01 | 0.882742 | 8.072556e-71 | 4.976509e-67 |
| MsG0380016936.01 | MsG0880046759.01 | 0.803770 | 2.974847e-49 | 1.507733e-46 |
| MsG0380016936.01 | MsG0880046969.01 | 0.802965 | 4.367271e-49 | 2.168182e-46 |
| MsG0380016936.01 | MsG0880047111.01 | 0.811365 | 7.261761e-51 | 4.486261e-48 |
| MsG0380016936.01 | MsG0880047112.01 | 0.803366 | 3.607763e-49 | 1.809548e-46 |
| MsG0380016936.01 | MsG0880047207.01 | 0.811482 | 6.848649e-51 | 4.244355e-48 |
| MsG0380016936.01 | MsG0880047537.01 | -0.801348 | 9.392700e-49 | 4.475504e-46 |
| MsG0380016936.01 | MsG0880047540.01 | 0.815638 | 8.343023e-52 | 5.784056e-49 |
| MsG0280007423.01 | MsG0380016936.01 | 0.852869 | 3.477820e-61 | 7.370848e-58 |
| MsG0280007511.01 | MsG0380016936.01 | 0.870040 | 1.969736e-66 | 7.553734e-63 |
| MsG0280007653.01 | MsG0380016936.01 | 0.802112 | 6.546485e-49 | 3.180218e-46 |
| MsG0280007874.01 | MsG0380016936.01 | -0.830684 | 2.557080e-55 | 2.713618e-52 |
| MsG0280008309.01 | MsG0380016936.01 | 0.835115 | 2.024341e-56 | 2.451433e-53 |
| MsG0280009103.01 | MsG0380016936.01 | 0.804801 | 1.814398e-49 | 9.443601e-47 |
| MsG0280009287.01 | MsG0380016936.01 | 0.813792 | 2.139510e-51 | 1.410646e-48 |
| MsG0280009434.01 | MsG0380016936.01 | 0.807289 | 5.435363e-50 | 3.015780e-47 |
| MsG0280009445.01 | MsG0380016936.01 | 0.836725 | 7.906661e-57 | 1.005061e-53 |
| MsG0280009863.01 | MsG0380016936.01 | 0.835981 | 1.222657e-56 | 1.519720e-53 |
| MsG0280010496.01 | MsG0380016936.01 | 0.829461 | 5.082579e-55 | 5.205345e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016936.01.T01 | MTR_3g098530 | 89.384 | 292 | 10 | 2 | 1 | 291 | 1 | 272 | 0.0 | 518 |
| MsG0380016936.01.T01 | MTR_8g096180 | 69.048 | 252 | 58 | 1 | 40 | 291 | 21 | 252 | 4.82e-129 | 367 |
| MsG0380016936.01.T01 | MTR_8g096170 | 67.729 | 251 | 61 | 1 | 40 | 290 | 24 | 254 | 8.43e-126 | 359 |
| MsG0380016936.01.T01 | MTR_8g096180 | 66.412 | 262 | 58 | 2 | 40 | 291 | 21 | 262 | 1.55e-125 | 358 |
| MsG0380016936.01.T01 | MTR_1g032580 | 35.573 | 253 | 142 | 5 | 39 | 290 | 5 | 237 | 1.12e-49 | 165 |
| MsG0380016936.01.T01 | MTR_1g032580 | 35.437 | 206 | 115 | 4 | 86 | 290 | 1 | 189 | 6.49e-41 | 141 |
| MsG0380016936.01.T01 | MTR_1g022185 | 28.794 | 257 | 152 | 7 | 34 | 282 | 7 | 240 | 2.92e-25 | 102 |
| MsG0380016936.01.T01 | MTR_4g105450 | 31.285 | 179 | 101 | 3 | 65 | 242 | 68 | 225 | 5.20e-22 | 92.8 |
| MsG0380016936.01.T01 | MTR_4g105460 | 30.055 | 183 | 106 | 3 | 65 | 246 | 70 | 231 | 7.01e-21 | 90.1 |
| MsG0380016936.01.T01 | MTR_3g097350 | 30.180 | 222 | 137 | 5 | 66 | 281 | 247 | 456 | 2.11e-20 | 91.3 |
| MsG0380016936.01.T01 | MTR_3g117090 | 31.179 | 263 | 148 | 8 | 35 | 281 | 62 | 307 | 2.42e-20 | 91.3 |
| MsG0380016936.01.T01 | MTR_8g095360 | 28.339 | 307 | 175 | 11 | 3 | 281 | 97 | 386 | 2.66e-20 | 90.9 |
| MsG0380016936.01.T01 | MTR_3g117090 | 31.559 | 263 | 147 | 9 | 35 | 281 | 62 | 307 | 2.78e-20 | 90.9 |
| MsG0380016936.01.T01 | MTR_3g112150 | 31.278 | 227 | 137 | 8 | 68 | 286 | 93 | 308 | 4.88e-20 | 90.5 |
| MsG0380016936.01.T01 | MTR_7g087500 | 26.872 | 227 | 130 | 6 | 64 | 282 | 42 | 240 | 5.57e-20 | 88.6 |
| MsG0380016936.01.T01 | MTR_4g070720 | 31.064 | 235 | 131 | 7 | 61 | 281 | 89 | 306 | 1.06e-19 | 89.4 |
| MsG0380016936.01.T01 | MTR_1g022480 | 28.912 | 294 | 175 | 11 | 10 | 286 | 51 | 327 | 4.03e-19 | 87.8 |
| MsG0380016936.01.T01 | MTR_1g022480 | 28.912 | 294 | 175 | 11 | 10 | 286 | 51 | 327 | 4.45e-19 | 87.4 |
| MsG0380016936.01.T01 | MTR_1g022480 | 28.912 | 294 | 175 | 11 | 10 | 286 | 51 | 327 | 4.85e-19 | 87.4 |
| MsG0380016936.01.T01 | MTR_5g021050 | 30.800 | 250 | 153 | 8 | 43 | 283 | 50 | 288 | 1.71e-18 | 85.5 |
| MsG0380016936.01.T01 | MTR_5g021050 | 30.800 | 250 | 153 | 8 | 43 | 283 | 50 | 288 | 1.94e-18 | 85.5 |
| MsG0380016936.01.T01 | MTR_1g022480 | 31.169 | 231 | 128 | 8 | 70 | 286 | 30 | 243 | 3.37e-18 | 84.7 |
| MsG0380016936.01.T01 | MTR_8g076880 | 31.064 | 235 | 129 | 8 | 62 | 281 | 73 | 289 | 1.45e-17 | 83.2 |
| MsG0380016936.01.T01 | MTR_1g104540 | 25.806 | 217 | 137 | 4 | 43 | 255 | 12 | 208 | 2.29e-17 | 82.0 |
| MsG0380016936.01.T01 | MTR_4g033435 | 30.085 | 236 | 124 | 8 | 63 | 281 | 266 | 477 | 3.80e-17 | 81.6 |
| MsG0380016936.01.T01 | MTR_3g074050 | 25.896 | 251 | 148 | 8 | 40 | 281 | 22 | 243 | 1.22e-16 | 79.0 |
| MsG0380016936.01.T01 | MTR_5g062310 | 25.907 | 193 | 119 | 4 | 66 | 257 | 46 | 215 | 1.48e-16 | 79.0 |
| MsG0380016936.01.T01 | MTR_3g117100 | 30.303 | 231 | 130 | 7 | 65 | 281 | 107 | 320 | 1.83e-16 | 79.7 |
| MsG0380016936.01.T01 | MTR_2g031610 | 28.319 | 226 | 134 | 8 | 66 | 281 | 142 | 349 | 2.04e-16 | 79.3 |
| MsG0380016936.01.T01 | MTR_4g070810 | 28.458 | 253 | 151 | 8 | 43 | 281 | 81 | 317 | 2.50e-16 | 79.3 |
| MsG0380016936.01.T01 | MTR_3g074050 | 25.498 | 251 | 150 | 8 | 40 | 281 | 22 | 244 | 4.00e-16 | 77.8 |
| MsG0380016936.01.T01 | MTR_4g013300 | 28.319 | 226 | 134 | 8 | 66 | 281 | 123 | 330 | 5.08e-16 | 78.2 |
| MsG0380016936.01.T01 | MTR_7g056587 | 29.151 | 271 | 151 | 12 | 28 | 281 | 64 | 310 | 8.19e-16 | 77.8 |
| MsG0380016936.01.T01 | MTR_7g056587 | 29.151 | 271 | 151 | 12 | 28 | 281 | 86 | 332 | 1.01e-15 | 77.4 |
| MsG0380016936.01.T01 | MTR_7g056587 | 29.151 | 271 | 151 | 12 | 28 | 281 | 72 | 318 | 1.07e-15 | 77.4 |
| MsG0380016936.01.T01 | MTR_7g056587 | 29.151 | 271 | 151 | 12 | 28 | 281 | 72 | 318 | 1.15e-15 | 77.4 |
| MsG0380016936.01.T01 | MTR_7g070480 | 26.009 | 223 | 148 | 5 | 63 | 281 | 95 | 304 | 3.01e-15 | 75.9 |
| MsG0380016936.01.T01 | MTR_4g033435 | 28.372 | 215 | 127 | 7 | 63 | 267 | 266 | 463 | 3.76e-14 | 72.8 |
| MsG0380016936.01.T01 | MTR_8g071000 | 28.125 | 288 | 170 | 12 | 10 | 281 | 35 | 301 | 4.94e-14 | 72.4 |
| MsG0380016936.01.T01 | MTR_4g105460 | 31.013 | 158 | 86 | 4 | 65 | 221 | 70 | 205 | 4.85e-13 | 67.0 |
| MsG0380016936.01.T01 | MTR_4g070790 | 26.180 | 233 | 143 | 6 | 62 | 281 | 78 | 294 | 3.65e-12 | 66.6 |
| MsG0380016936.01.T01 | MTR_1g069915 | 28.070 | 228 | 141 | 10 | 61 | 281 | 142 | 353 | 2.83e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016936.01.T01 | AT1G01630 | 60.159 | 251 | 80 | 1 | 41 | 291 | 25 | 255 | 4.04e-112 | 324 |
| MsG0380016936.01.T01 | AT1G14820 | 35.385 | 260 | 139 | 5 | 36 | 290 | 1 | 236 | 1.91e-44 | 152 |
| MsG0380016936.01.T01 | AT1G14820 | 36.441 | 236 | 124 | 4 | 60 | 290 | 9 | 223 | 3.22e-42 | 145 |
| MsG0380016936.01.T01 | AT1G14820 | 36.441 | 236 | 124 | 4 | 60 | 290 | 9 | 223 | 3.22e-42 | 145 |
| MsG0380016936.01.T01 | AT4G08690 | 28.916 | 249 | 144 | 6 | 40 | 281 | 16 | 238 | 1.47e-24 | 100 |
| MsG0380016936.01.T01 | AT4G08690 | 28.916 | 249 | 144 | 6 | 40 | 281 | 16 | 238 | 1.47e-24 | 100 |
| MsG0380016936.01.T01 | AT4G08690 | 28.916 | 249 | 144 | 6 | 40 | 281 | 16 | 238 | 1.47e-24 | 100 |
| MsG0380016936.01.T01 | AT1G75170 | 28.462 | 260 | 146 | 9 | 31 | 282 | 14 | 241 | 1.50e-22 | 95.1 |
| MsG0380016936.01.T01 | AT1G75170 | 28.462 | 260 | 146 | 9 | 31 | 282 | 14 | 241 | 1.50e-22 | 95.1 |
| MsG0380016936.01.T01 | AT1G22180 | 28.514 | 249 | 145 | 7 | 41 | 282 | 20 | 242 | 2.53e-20 | 89.4 |
| MsG0380016936.01.T01 | AT1G22180 | 28.514 | 249 | 145 | 7 | 41 | 282 | 20 | 242 | 2.53e-20 | 89.4 |
| MsG0380016936.01.T01 | AT5G63060 | 32.240 | 183 | 102 | 5 | 65 | 246 | 36 | 197 | 4.63e-20 | 87.0 |
| MsG0380016936.01.T01 | AT5G63060 | 32.240 | 183 | 102 | 5 | 65 | 246 | 71 | 232 | 5.50e-20 | 87.4 |
| MsG0380016936.01.T01 | AT4G34580 | 32.189 | 233 | 126 | 9 | 64 | 281 | 83 | 298 | 7.53e-20 | 89.7 |
| MsG0380016936.01.T01 | AT4G34580 | 32.189 | 233 | 126 | 9 | 64 | 281 | 83 | 298 | 7.53e-20 | 89.7 |
| MsG0380016936.01.T01 | AT4G36640 | 27.803 | 223 | 136 | 6 | 66 | 285 | 41 | 241 | 1.76e-19 | 86.7 |
| MsG0380016936.01.T01 | AT4G36640 | 27.803 | 223 | 136 | 6 | 66 | 285 | 41 | 241 | 1.76e-19 | 86.7 |
| MsG0380016936.01.T01 | AT4G09160 | 26.298 | 289 | 174 | 9 | 18 | 281 | 247 | 521 | 2.06e-19 | 88.6 |
| MsG0380016936.01.T01 | AT4G36490 | 29.787 | 235 | 132 | 7 | 62 | 281 | 72 | 288 | 2.07e-19 | 88.6 |
| MsG0380016936.01.T01 | AT4G09160 | 26.298 | 289 | 174 | 9 | 18 | 281 | 272 | 546 | 2.14e-19 | 88.6 |
| MsG0380016936.01.T01 | AT4G09160 | 26.298 | 289 | 174 | 9 | 18 | 281 | 247 | 521 | 2.22e-19 | 88.6 |
| MsG0380016936.01.T01 | AT4G39180 | 30.833 | 240 | 135 | 8 | 61 | 286 | 89 | 311 | 5.09e-19 | 87.4 |
| MsG0380016936.01.T01 | AT4G39180 | 30.833 | 240 | 135 | 8 | 61 | 286 | 89 | 311 | 5.74e-19 | 87.0 |
| MsG0380016936.01.T01 | AT4G39180 | 30.833 | 240 | 135 | 8 | 61 | 286 | 89 | 311 | 5.74e-19 | 87.0 |
| MsG0380016936.01.T01 | AT1G30690 | 28.959 | 221 | 140 | 6 | 63 | 281 | 217 | 422 | 9.01e-19 | 86.7 |
| MsG0380016936.01.T01 | AT1G30690 | 28.959 | 221 | 140 | 6 | 63 | 281 | 217 | 422 | 9.01e-19 | 86.7 |
| MsG0380016936.01.T01 | AT2G18180 | 30.213 | 235 | 131 | 8 | 62 | 281 | 75 | 291 | 1.80e-18 | 85.9 |
| MsG0380016936.01.T01 | AT2G18180 | 30.213 | 235 | 131 | 8 | 62 | 281 | 75 | 291 | 2.01e-18 | 85.5 |
| MsG0380016936.01.T01 | AT1G19650 | 31.301 | 246 | 153 | 7 | 43 | 281 | 78 | 314 | 2.82e-18 | 84.7 |
| MsG0380016936.01.T01 | AT1G19650 | 32.000 | 225 | 137 | 7 | 64 | 281 | 99 | 314 | 2.94e-18 | 85.1 |
| MsG0380016936.01.T01 | AT4G39170 | 29.268 | 287 | 171 | 8 | 10 | 281 | 49 | 318 | 4.72e-18 | 84.7 |
| MsG0380016936.01.T01 | AT4G39170 | 29.268 | 287 | 171 | 8 | 10 | 281 | 49 | 318 | 5.03e-18 | 84.3 |
| MsG0380016936.01.T01 | AT1G19650 | 30.738 | 244 | 152 | 7 | 44 | 281 | 10 | 242 | 6.99e-18 | 84.0 |
| MsG0380016936.01.T01 | AT2G21540 | 31.064 | 235 | 131 | 8 | 61 | 281 | 88 | 305 | 7.45e-18 | 84.0 |
| MsG0380016936.01.T01 | AT2G21540 | 31.064 | 235 | 131 | 8 | 61 | 281 | 88 | 305 | 7.45e-18 | 84.0 |
| MsG0380016936.01.T01 | AT2G21540 | 31.064 | 235 | 131 | 8 | 61 | 281 | 88 | 305 | 7.45e-18 | 84.0 |
| MsG0380016936.01.T01 | AT2G21540 | 31.064 | 235 | 131 | 8 | 61 | 281 | 88 | 305 | 7.45e-18 | 84.0 |
| MsG0380016936.01.T01 | AT2G21540 | 31.064 | 235 | 131 | 8 | 61 | 281 | 88 | 305 | 7.97e-18 | 84.0 |
| MsG0380016936.01.T01 | AT2G21540 | 31.064 | 235 | 131 | 8 | 61 | 281 | 88 | 305 | 7.97e-18 | 84.0 |
| MsG0380016936.01.T01 | AT2G18180 | 30.088 | 226 | 125 | 8 | 71 | 281 | 13 | 220 | 8.45e-18 | 83.6 |
| MsG0380016936.01.T01 | AT2G18180 | 30.088 | 226 | 125 | 8 | 71 | 281 | 13 | 220 | 9.86e-18 | 83.6 |
| MsG0380016936.01.T01 | AT2G21520 | 29.870 | 231 | 131 | 7 | 65 | 281 | 111 | 324 | 1.16e-17 | 83.6 |
| MsG0380016936.01.T01 | AT2G21520 | 29.870 | 231 | 131 | 7 | 65 | 281 | 111 | 324 | 1.16e-17 | 83.6 |
| MsG0380016936.01.T01 | AT2G21520 | 29.870 | 231 | 131 | 7 | 65 | 281 | 107 | 320 | 1.27e-17 | 83.2 |
| MsG0380016936.01.T01 | AT2G16380 | 32.759 | 232 | 124 | 9 | 65 | 281 | 84 | 298 | 2.68e-17 | 82.4 |
| MsG0380016936.01.T01 | AT2G16380 | 32.759 | 232 | 124 | 9 | 65 | 281 | 84 | 298 | 2.68e-17 | 82.4 |
| MsG0380016936.01.T01 | AT1G75370 | 30.081 | 246 | 156 | 7 | 43 | 281 | 87 | 323 | 1.38e-16 | 80.1 |
| MsG0380016936.01.T01 | AT5G47510 | 29.362 | 235 | 135 | 6 | 62 | 282 | 45 | 262 | 1.72e-16 | 79.0 |
| MsG0380016936.01.T01 | AT5G47510 | 29.362 | 235 | 135 | 6 | 62 | 282 | 45 | 262 | 2.36e-16 | 79.0 |
| MsG0380016936.01.T01 | AT1G75370 | 30.769 | 247 | 153 | 8 | 43 | 281 | 87 | 323 | 2.43e-16 | 79.7 |
| MsG0380016936.01.T01 | AT5G47510 | 29.362 | 235 | 135 | 6 | 62 | 282 | 44 | 261 | 2.43e-16 | 79.0 |
| MsG0380016936.01.T01 | AT1G72160 | 27.928 | 222 | 140 | 7 | 66 | 281 | 164 | 371 | 4.38e-16 | 78.6 |
| MsG0380016936.01.T01 | AT1G55690 | 29.730 | 222 | 132 | 8 | 71 | 281 | 104 | 312 | 1.13e-15 | 77.4 |
| MsG0380016936.01.T01 | AT1G55690 | 29.730 | 222 | 132 | 8 | 71 | 281 | 104 | 312 | 1.18e-15 | 77.4 |
| MsG0380016936.01.T01 | AT1G55690 | 29.730 | 222 | 132 | 8 | 71 | 281 | 104 | 312 | 1.18e-15 | 77.4 |
| MsG0380016936.01.T01 | AT1G55690 | 29.730 | 222 | 132 | 8 | 71 | 281 | 104 | 312 | 1.18e-15 | 77.4 |
| MsG0380016936.01.T01 | AT1G55690 | 29.730 | 222 | 132 | 8 | 71 | 281 | 104 | 312 | 1.18e-15 | 77.4 |
| MsG0380016936.01.T01 | AT1G05370 | 27.778 | 198 | 122 | 2 | 62 | 259 | 38 | 214 | 1.02e-14 | 74.3 |
| MsG0380016936.01.T01 | AT3G24840 | 28.517 | 263 | 142 | 11 | 41 | 281 | 75 | 313 | 8.67e-14 | 72.0 |
| MsG0380016936.01.T01 | AT3G24840 | 28.517 | 263 | 142 | 11 | 41 | 281 | 75 | 313 | 8.67e-14 | 72.0 |
| MsG0380016936.01.T01 | AT3G24840 | 28.517 | 263 | 142 | 11 | 41 | 281 | 75 | 313 | 8.67e-14 | 72.0 |
| MsG0380016936.01.T01 | AT3G24840 | 28.517 | 263 | 142 | 11 | 41 | 281 | 75 | 313 | 8.67e-14 | 72.0 |
| MsG0380016936.01.T01 | AT3G24840 | 28.517 | 263 | 142 | 11 | 41 | 281 | 75 | 313 | 8.76e-14 | 71.6 |
| MsG0380016936.01.T01 | AT3G24840 | 28.517 | 263 | 142 | 11 | 41 | 281 | 75 | 313 | 8.76e-14 | 71.6 |
| MsG0380016936.01.T01 | AT3G24840 | 28.517 | 263 | 142 | 11 | 41 | 281 | 75 | 313 | 8.76e-14 | 71.6 |
| MsG0380016936.01.T01 | AT1G75170 | 32.000 | 125 | 82 | 2 | 161 | 282 | 34 | 158 | 1.19e-13 | 68.9 |
| MsG0380016936.01.T01 | AT5G56160 | 28.821 | 229 | 131 | 7 | 68 | 281 | 94 | 305 | 4.60e-13 | 69.7 |
| MsG0380016936.01.T01 | AT5G56160 | 28.821 | 229 | 131 | 7 | 68 | 281 | 94 | 305 | 4.60e-13 | 69.7 |
| MsG0380016936.01.T01 | AT5G56160 | 28.322 | 286 | 162 | 11 | 17 | 281 | 42 | 305 | 5.39e-13 | 69.3 |
| MsG0380016936.01.T01 | AT1G22180 | 26.108 | 203 | 118 | 6 | 86 | 282 | 1 | 177 | 5.75e-13 | 67.8 |
| MsG0380016936.01.T01 | AT1G22180 | 26.108 | 203 | 118 | 6 | 86 | 282 | 1 | 177 | 5.75e-13 | 67.8 |
| MsG0380016936.01.T01 | AT4G36640 | 31.092 | 119 | 79 | 2 | 170 | 285 | 63 | 181 | 1.57e-12 | 66.2 |
| MsG0380016936.01.T01 | AT5G47510 | 28.378 | 222 | 128 | 6 | 76 | 283 | 2 | 206 | 1.83e-12 | 67.0 |
| MsG0380016936.01.T01 | AT2G18180 | 28.910 | 211 | 117 | 8 | 86 | 281 | 1 | 193 | 2.16e-12 | 67.4 |
| MsG0380016936.01.T01 | AT3G51670 | 25.221 | 226 | 140 | 6 | 66 | 281 | 82 | 288 | 5.72e-12 | 66.2 |
| MsG0380016936.01.T01 | AT3G22410 | 26.316 | 190 | 116 | 5 | 68 | 255 | 33 | 200 | 7.18e-12 | 65.9 |
Find 71 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATCTATTGCAGACATTA+AGG | 0.206776 | 3:+89607937 | MsG0380016936.01.T01:CDS |
| AGTTCTCATGAGGCTGATTT+TGG | 0.214151 | 3:-89606125 | None:intergenic |
| GCAGCAAAAGCAACAGTTAT+AGG | 0.238428 | 3:-89606766 | None:intergenic |
| TAAAAGTGTTACCTTCTTCT+TGG | 0.260617 | 3:-89608119 | None:intergenic |
| CTTACATGTTTATGAAAGTA+TGG | 0.278705 | 3:+89608065 | MsG0380016936.01.T01:CDS |
| TTCTCCATTTCATGTACTTT+AGG | 0.284773 | 3:-89606645 | None:intergenic |
| AAGTTATAAATATTTATTAA+TGG | 0.286864 | 3:+89608381 | MsG0380016936.01.T01:three_prime_UTR |
| CAATGCTTGAAATCCTCTTA+TGG | 0.304858 | 3:+89606868 | MsG0380016936.01.T01:CDS |
| GAATCCAATGCTGAATTTCC+AGG | 0.307712 | 3:-89606013 | None:intergenic |
| GAATCTTGTATTGGAACTAA+TGG | 0.319714 | 3:-89608324 | None:intergenic |
| TTATTACAAGCAAATAAATA+AGG | 0.338806 | 3:+89608356 | MsG0380016936.01.T01:three_prime_UTR |
| ATTGGATTCAAAACATGAAT+TGG | 0.341875 | 3:+89606027 | MsG0380016936.01.T01:CDS |
| ATTAGTTTGTTAACCATAAG+AGG | 0.343180 | 3:-89606881 | None:intergenic |
| AAGCCGCGACCCTTCTTCTA+AGG | 0.343766 | 3:+89606156 | MsG0380016936.01.T01:CDS |
| AGTCAGCTCCCAGAGATATA+TGG | 0.360943 | 3:+89608291 | MsG0380016936.01.T01:CDS |
| ATTAATCAAGAATCTTGTAT+TGG | 0.399694 | 3:-89608333 | None:intergenic |
| CATACTTTCATAAACATGTA+AGG | 0.403022 | 3:-89608064 | None:intergenic |
| AAAATTCTTGTTCAAGATGA+TGG | 0.403189 | 3:+89606070 | MsG0380016936.01.T01:CDS |
| TGTTCCTAAAGTACATGAAA+TGG | 0.412855 | 3:+89606641 | MsG0380016936.01.T01:CDS |
| AACAACTTTCCCAGTCTCTC+TGG | 0.415107 | 3:-89608028 | None:intergenic |
| GTATCTATTGCAGACATTAA+GGG | 0.415933 | 3:+89607938 | MsG0380016936.01.T01:CDS |
| AGTTTGCCTCCATATATCTC+TGG | 0.418208 | 3:-89608300 | None:intergenic |
| AATGCTGAATTTCCAGGCTC+AGG | 0.419917 | 3:-89606007 | None:intergenic |
| TCAAGATGATGGAGCTTTGA+AGG | 0.435484 | 3:+89606081 | MsG0380016936.01.T01:CDS |
| CAAGAAAAGATGTATGTTCA+AGG | 0.455113 | 3:+89606724 | MsG0380016936.01.T01:CDS |
| TATTGCAGACATTAAGGGCT+GGG | 0.457362 | 3:+89607943 | MsG0380016936.01.T01:CDS |
| AGATTACTATCCAGAGAGAC+TGG | 0.459793 | 3:+89608018 | MsG0380016936.01.T01:CDS |
| TTGTTTGTTACCTTAGAAGA+AGG | 0.464246 | 3:-89606166 | None:intergenic |
| GAAACAGTGAGCCCTGAGCC+TGG | 0.469224 | 3:+89605995 | MsG0380016936.01.T01:CDS |
| GACAAAGAACAAGGCTAAAG+TGG | 0.473478 | 3:-89608554 | None:intergenic |
| ACATATTGTAGTTCTATACT+AGG | 0.481489 | 3:+89608470 | MsG0380016936.01.T01:three_prime_UTR |
| TGGTATTGTCATCAATGAAA+GGG | 0.492868 | 3:-89608099 | None:intergenic |
| GATTAATCCGTCTCTTTCGT+TGG | 0.500637 | 3:+89608427 | MsG0380016936.01.T01:three_prime_UTR |
| TTGGTATTGTCATCAATGAA+AGG | 0.500676 | 3:-89608100 | None:intergenic |
| CTATTGCAGACATTAAGGGC+TGG | 0.521375 | 3:+89607942 | MsG0380016936.01.T01:CDS |
| TCGTGATTTAGATGTAGATA+AGG | 0.528241 | 3:+89606609 | MsG0380016936.01.T01:CDS |
| TGTTCAAGGAGTGGATAAGA+AGG | 0.530265 | 3:+89606738 | MsG0380016936.01.T01:CDS |
| TGGATAGTAATCTTGTAGAA+TGG | 0.535897 | 3:-89608008 | None:intergenic |
| ACGCATGAATTGCTCAATCA+AGG | 0.540770 | 3:-89608520 | None:intergenic |
| ATGCTGAATTTCCAGGCTCA+GGG | 0.541275 | 3:-89606006 | None:intergenic |
| TAATGTGACAGGATGCCACC+AGG | 0.550381 | 3:+89607902 | MsG0380016936.01.T01:intron |
| TGTTTGTTACCTTAGAAGAA+GGG | 0.551270 | 3:-89606165 | None:intergenic |
| TGATGACAATACCAAGAAGA+AGG | 0.551378 | 3:+89608108 | MsG0380016936.01.T01:CDS |
| TATGCAAACAGCGACATTCG+CGG | 0.552322 | 3:+89607968 | MsG0380016936.01.T01:CDS |
| AGATCGTCAGGTATCTCTGA+AGG | 0.558116 | 3:-89606697 | None:intergenic |
| AGCGACATTCGCGGTTACCT+CGG | 0.560343 | 3:+89607977 | MsG0380016936.01.T01:CDS |
| TGAGCCTGGAAATTCAGCAT+TGG | 0.570238 | 3:+89606009 | MsG0380016936.01.T01:CDS |
| GTTTGCCTCCATATATCTCT+GGG | 0.573143 | 3:-89608299 | None:intergenic |
| AGAAAATCATTTGTTCCAAG+TGG | 0.582982 | 3:+89606664 | MsG0380016936.01.T01:CDS |
| AAAGATGTATGTTCAAGGAG+TGG | 0.599654 | 3:+89606729 | MsG0380016936.01.T01:CDS |
| TTACCTTAGAAGAAGGGTCG+CGG | 0.603865 | 3:-89606159 | None:intergenic |
| ATTGCAGACATTAAGGGCTG+GGG | 0.606164 | 3:+89607944 | MsG0380016936.01.T01:CDS |
| GATCGTCAGGTATCTCTGAA+GGG | 0.611116 | 3:-89606696 | None:intergenic |
| TCATAAACATGTAAGGTGCA+TGG | 0.614836 | 3:-89608057 | None:intergenic |
| ATCGTCAGGTATCTCTGAAG+GGG | 0.622595 | 3:-89606695 | None:intergenic |
| CAACTAATAGCATCTCAAGT+GGG | 0.624159 | 3:-89606843 | None:intergenic |
| GAAGGGGATACAGAACCACT+TGG | 0.629494 | 3:-89606679 | None:intergenic |
| TTTCAACAAGAGTTCTCATG+AGG | 0.631501 | 3:-89606135 | None:intergenic |
| AATGTGACAGGATGCCACCA+GGG | 0.634560 | 3:+89607903 | MsG0380016936.01.T01:intron |
| GATTACTATCCAGAGAGACT+GGG | 0.647177 | 3:+89608019 | MsG0380016936.01.T01:CDS |
| AGACGGATTAATCAACTGCA+CGG | 0.649511 | 3:-89608417 | None:intergenic |
| ACAACTAATAGCATCTCAAG+TGG | 0.651022 | 3:-89606844 | None:intergenic |
| TTGGCTAAAGAAGAAACCAA+GGG | 0.653928 | 3:+89606046 | MsG0380016936.01.T01:CDS |
| GTTCAAGGAGTGGATAAGAA+GGG | 0.656937 | 3:+89606739 | MsG0380016936.01.T01:CDS |
| ATTGGCTAAAGAAGAAACCA+AGG | 0.661306 | 3:+89606045 | MsG0380016936.01.T01:CDS |
| GCTTACACCAACGAAAGAGA+CGG | 0.670080 | 3:-89608434 | None:intergenic |
| CAGCTCCCAGAGATATATGG+AGG | 0.670836 | 3:+89608294 | MsG0380016936.01.T01:CDS |
| TTTATAGCAGACAAAGAACA+AGG | 0.673792 | 3:-89608563 | None:intergenic |
| ATGTGACAGGATGCCACCAG+GGG | 0.685775 | 3:+89607904 | MsG0380016936.01.T01:intron |
| TGGCTAAAGAAGAAACCAAG+GGG | 0.720399 | 3:+89606047 | MsG0380016936.01.T01:CDS |
| GTAGAATGGTTAGAGCACCG+AGG | 0.822792 | 3:-89607994 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATACAAAATTTATGA+TGG | + | Chr3:89606460-89606479 | MsG0380016936.01.T01:intron | 10.0% |
| !!! | GTTATTTTTTTAATTCTAAA+AGG | + | Chr3:89607287-89607306 | MsG0380016936.01.T01:intron | 10.0% |
| !!! | TTCTTTATAAAATTTGTTTT+AGG | + | Chr3:89607311-89607330 | MsG0380016936.01.T01:intron | 10.0% |
| !! | TTATTACAAGCAAATAAATA+AGG | + | Chr3:89608356-89608375 | MsG0380016936.01.T01:three_prime_UTR | 15.0% |
| !!! | AAACATTTTCAAAACAAAAA+TGG | + | Chr3:89606790-89606809 | MsG0380016936.01.T01:CDS | 15.0% |
| !!! | AAATTTATCTTTTTTTACAC+AGG | - | Chr3:89607515-89607534 | None:intergenic | 15.0% |
| !!! | ATAAATATTTTTTGTGTTAC+AGG | + | Chr3:89607720-89607739 | MsG0380016936.01.T01:intron | 15.0% |
| !!! | TAAATATTTTTTGTGTTACA+GGG | + | Chr3:89607721-89607740 | MsG0380016936.01.T01:intron | 15.0% |
| !!! | TTCTAAAAAAGTCAAATTTT+GGG | - | Chr3:89606393-89606412 | None:intergenic | 15.0% |
| !!! | TTTCTAAAAAAGTCAAATTT+TGG | - | Chr3:89606394-89606413 | None:intergenic | 15.0% |
| !!! | TTTTTTCGAACTAAATTTTT+TGG | + | Chr3:89606430-89606449 | MsG0380016936.01.T01:intron | 15.0% |
| !! | ATGCATATACAGTTTATATT+TGG | + | Chr3:89607832-89607851 | MsG0380016936.01.T01:intron | 20.0% |
| !! | ATTAATCAAGAATCTTGTAT+TGG | - | Chr3:89608336-89608355 | None:intergenic | 20.0% |
| !! | CTTATGTCTAAATTAACAAA+AGG | - | Chr3:89607664-89607683 | None:intergenic | 20.0% |
| !!! | AACTAAATTGACTTATTTTG+AGG | - | Chr3:89607124-89607143 | None:intergenic | 20.0% |
| !!! | TTTTCAAAACAAAAATGGTT+TGG | + | Chr3:89606795-89606814 | MsG0380016936.01.T01:CDS | 20.0% |
| !!! | TTTTGATAAAACAGTGATAA+CGG | + | Chr3:89606230-89606249 | MsG0380016936.01.T01:intron | 20.0% |
| ! | AAAATTCTTGTTCAAGATGA+TGG | + | Chr3:89606070-89606089 | MsG0380016936.01.T01:CDS | 25.0% |
| ! | AACTTTACAATTCTTCTTAC+TGG | - | Chr3:89607868-89607887 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | - | Chr3:89607452-89607471 | None:intergenic | 25.0% |
| ! | ATAGAACAAAACAAACATCA+TGG | - | Chr3:89606486-89606505 | None:intergenic | 25.0% |
| ! | ATTGGATTCAAAACATGAAT+TGG | + | Chr3:89606027-89606046 | MsG0380016936.01.T01:CDS | 25.0% |
| ! | CATACTTTCATAAACATGTA+AGG | - | Chr3:89608067-89608086 | None:intergenic | 25.0% |
| ! | CTAATATGTGAAGTTATGTT+TGG | + | Chr3:89606899-89606918 | MsG0380016936.01.T01:intron | 25.0% |
| ! | CTTACATGTTTATGAAAGTA+TGG | + | Chr3:89608065-89608084 | MsG0380016936.01.T01:CDS | 25.0% |
| ! | TCCATAAATTCTCCAAAATA+GGG | + | Chr3:89607019-89607038 | MsG0380016936.01.T01:intron | 25.0% |
| ! | TGCATGAATTAATTAATGAG+TGG | - | Chr3:89607794-89607813 | None:intergenic | 25.0% |
| ! | TTCCATAAATTCTCCAAAAT+AGG | + | Chr3:89607018-89607037 | MsG0380016936.01.T01:intron | 25.0% |
| ! | TTTGAAAATTGAGATGTTCT+AGG | + | Chr3:89608181-89608200 | MsG0380016936.01.T01:intron | 25.0% |
| !! | ACATATTGTAGTTCTATACT+AGG | + | Chr3:89608470-89608489 | MsG0380016936.01.T01:three_prime_UTR | 25.0% |
| !! | TATGTTGTTTATCCAAACAA+TGG | + | Chr3:89607690-89607709 | MsG0380016936.01.T01:intron | 25.0% |
| !!! | AAAATTTGTTTTAGGCATCT+TGG | + | Chr3:89607319-89607338 | MsG0380016936.01.T01:intron | 25.0% |
| !!! | ATTAATTTGTTTATCCCAAC+AGG | + | Chr3:89607607-89607626 | MsG0380016936.01.T01:intron | 25.0% |
| !!! | ATTAGTTTGTTAACCATAAG+AGG | - | Chr3:89606884-89606903 | None:intergenic | 25.0% |
| !!! | TCATTTTTTCAACAAGAGAA+TGG | + | Chr3:89605973-89605992 | MsG0380016936.01.T01:exon | 25.0% |
| AAACTCATGTGAGACTATTT+GGG | + | Chr3:89607397-89607416 | MsG0380016936.01.T01:intron | 30.0% | |
| AAATAAGTCAATCCAAACAC+TGG | - | Chr3:89607359-89607378 | None:intergenic | 30.0% | |
| AATAAGTCAATCCAAACACT+GGG | - | Chr3:89607358-89607377 | None:intergenic | 30.0% | |
| AGAAAATCATTTGTTCCAAG+TGG | + | Chr3:89606664-89606683 | MsG0380016936.01.T01:CDS | 30.0% | |
| AGACCAAAAGGATATATATG+AGG | - | Chr3:89607210-89607229 | None:intergenic | 30.0% | |
| AGTGAAAAACAGATCCAAAT+CGG | - | Chr3:89606352-89606371 | None:intergenic | 30.0% | |
| CAAGAAAAGATGTATGTTCA+AGG | + | Chr3:89606724-89606743 | MsG0380016936.01.T01:CDS | 30.0% | |
| GAATCTTGTATTGGAACTAA+TGG | - | Chr3:89608327-89608346 | None:intergenic | 30.0% | |
| GATTTGAACTTAAGACCAAA+AGG | - | Chr3:89607222-89607241 | None:intergenic | 30.0% | |
| GTATCTATTGCAGACATTAA+GGG | + | Chr3:89607938-89607957 | MsG0380016936.01.T01:CDS | 30.0% | |
| GTTGTAGTTGCAAAAAAAAG+TGG | - | Chr3:89606266-89606285 | None:intergenic | 30.0% | |
| TAAACTCATGTGAGACTATT+TGG | + | Chr3:89607396-89607415 | MsG0380016936.01.T01:intron | 30.0% | |
| TAGGTAGCAAATAGTTAGAT+TGG | + | Chr3:89606524-89606543 | MsG0380016936.01.T01:intron | 30.0% | |
| TCGTGATTTAGATGTAGATA+AGG | + | Chr3:89606609-89606628 | MsG0380016936.01.T01:CDS | 30.0% | |
| TGGATAGTAATCTTGTAGAA+TGG | - | Chr3:89608011-89608030 | None:intergenic | 30.0% | |
| TGGTATTGTCATCAATGAAA+GGG | - | Chr3:89608102-89608121 | None:intergenic | 30.0% | |
| TGTATCTATTGCAGACATTA+AGG | + | Chr3:89607937-89607956 | MsG0380016936.01.T01:CDS | 30.0% | |
| TGTTCCTAAAGTACATGAAA+TGG | + | Chr3:89606641-89606660 | MsG0380016936.01.T01:CDS | 30.0% | |
| TTCTCCATTTCATGTACTTT+AGG | - | Chr3:89606648-89606667 | None:intergenic | 30.0% | |
| TTGATGAAGAACTATTTCAC+TGG | + | Chr3:89608640-89608659 | MsG0380016936.01.T01:three_prime_UTR | 30.0% | |
| TTGGTATTGTCATCAATGAA+AGG | - | Chr3:89608103-89608122 | None:intergenic | 30.0% | |
| TTTATAGCAGACAAAGAACA+AGG | - | Chr3:89608566-89608585 | None:intergenic | 30.0% | |
| ! | AGACCTCATATATATCCTTT+TGG | + | Chr3:89607204-89607223 | MsG0380016936.01.T01:intron | 30.0% |
| ! | GTTTTCATAAACTACCTGTT+GGG | - | Chr3:89607624-89607643 | None:intergenic | 30.0% |
| ! | TGTTTGTTACCTTAGAAGAA+GGG | - | Chr3:89606168-89606187 | None:intergenic | 30.0% |
| ! | TGTTTTCATAAACTACCTGT+TGG | - | Chr3:89607625-89607644 | None:intergenic | 30.0% |
| ! | TTGTTTGTTACCTTAGAAGA+AGG | - | Chr3:89606169-89606188 | None:intergenic | 30.0% |
| !! | ACCCTATTTTGGAGAATTTA+TGG | - | Chr3:89607023-89607042 | None:intergenic | 30.0% |
| !! | ATTACTATGTTGTACCGATT+TGG | + | Chr3:89606335-89606354 | MsG0380016936.01.T01:intron | 30.0% |
| !! | GTTCTATTACAGTACTGATT+AGG | + | Chr3:89606499-89606518 | MsG0380016936.01.T01:intron | 30.0% |
| !! | TAAAAGTGTTACCTTCTTCT+TGG | - | Chr3:89608122-89608141 | None:intergenic | 30.0% |
| !! | TTGGTCTTAAGTTCAAATCT+TGG | + | Chr3:89607223-89607242 | MsG0380016936.01.T01:intron | 30.0% |
| AAAGATGTATGTTCAAGGAG+TGG | + | Chr3:89606729-89606748 | MsG0380016936.01.T01:CDS | 35.0% | |
| ACAACTAATAGCATCTCAAG+TGG | - | Chr3:89606847-89606866 | None:intergenic | 35.0% | |
| AGACTATTTGGGAGAGTTTA+AGG | + | Chr3:89607408-89607427 | MsG0380016936.01.T01:intron | 35.0% | |
| AGGTTTAAACTTCGGGATTT+AGG | + | Chr3:89607085-89607104 | MsG0380016936.01.T01:intron | 35.0% | |
| ATGTAGTTGTGAGATCGTTT+AGG | + | Chr3:89606944-89606963 | MsG0380016936.01.T01:intron | 35.0% | |
| ATTGGCTAAAGAAGAAACCA+AGG | + | Chr3:89606045-89606064 | MsG0380016936.01.T01:CDS | 35.0% | |
| CAACTAATAGCATCTCAAGT+GGG | - | Chr3:89606846-89606865 | None:intergenic | 35.0% | |
| CAATGCTTGAAATCCTCTTA+TGG | + | Chr3:89606868-89606887 | MsG0380016936.01.T01:CDS | 35.0% | |
| GGAATTGAATTGAGCTTGAT+GGG | + | Chr3:89606545-89606564 | MsG0380016936.01.T01:intron | 35.0% | |
| GGTTTAAACTTCGGGATTTA+GGG | + | Chr3:89607086-89607105 | MsG0380016936.01.T01:intron | 35.0% | |
| TCATAAACATGTAAGGTGCA+TGG | - | Chr3:89608060-89608079 | None:intergenic | 35.0% | |
| TGATGACAATACCAAGAAGA+AGG | + | Chr3:89608108-89608127 | MsG0380016936.01.T01:CDS | 35.0% | |
| TGGAATTGAATTGAGCTTGA+TGG | + | Chr3:89606544-89606563 | MsG0380016936.01.T01:intron | 35.0% | |
| TTGGCTAAAGAAGAAACCAA+GGG | + | Chr3:89606046-89606065 | MsG0380016936.01.T01:CDS | 35.0% | |
| TTTATCGTTGAGCCATTGTT+TGG | - | Chr3:89607705-89607724 | None:intergenic | 35.0% | |
| TTTCAACAAGAGTTCTCATG+AGG | - | Chr3:89606138-89606157 | None:intergenic | 35.0% | |
| ! | CTAATCTTGAACAAAGTGCT+AGG | - | Chr3:89606300-89606319 | None:intergenic | 35.0% |
| ! | TTGAACAAGAATTTTCCCCT+TGG | - | Chr3:89606065-89606084 | None:intergenic | 35.0% |
| !! | TTACAGTACTGATTAGGCTT+AGG | + | Chr3:89606505-89606524 | MsG0380016936.01.T01:intron | 35.0% |
| AAAATAGGGTCTGTTTGGAC+AGG | + | Chr3:89607033-89607052 | MsG0380016936.01.T01:intron | 40.0% | |
| AAATAGGGTCTGTTTGGACA+GGG | + | Chr3:89607034-89607053 | MsG0380016936.01.T01:intron | 40.0% | |
| AAGTTTAAACCTTGCTTGGG+TGG | - | Chr3:89607077-89607096 | None:intergenic | 40.0% | |
| ACGCATGAATTGCTCAATCA+AGG | - | Chr3:89608523-89608542 | None:intergenic | 40.0% | |
| AGATTACTATCCAGAGAGAC+TGG | + | Chr3:89608018-89608037 | MsG0380016936.01.T01:CDS | 40.0% | |
| AGCTTACCCAATAATGTGAC+AGG | + | Chr3:89607891-89607910 | MsG0380016936.01.T01:intron | 40.0% | |
| AGTTTGCCTCCATATATCTC+TGG | - | Chr3:89608303-89608322 | None:intergenic | 40.0% | |
| CCAAGCAAGGTTTAAACTTC+GGG | + | Chr3:89607078-89607097 | MsG0380016936.01.T01:intron | 40.0% | |
| CCCAAGCAAGGTTTAAACTT+CGG | + | Chr3:89607077-89607096 | MsG0380016936.01.T01:intron | 40.0% | |
| CCGAAGTTTAAACCTTGCTT+GGG | - | Chr3:89607080-89607099 | None:intergenic | 40.0% | |
| GAATCCAATGCTGAATTTCC+AGG | - | Chr3:89606016-89606035 | None:intergenic | 40.0% | |
| GACAAAGAACAAGGCTAAAG+TGG | - | Chr3:89608557-89608576 | None:intergenic | 40.0% | |
| GATTAATCCGTCTCTTTCGT+TGG | + | Chr3:89608427-89608446 | MsG0380016936.01.T01:three_prime_UTR | 40.0% | |
| GATTACTATCCAGAGAGACT+GGG | + | Chr3:89608019-89608038 | MsG0380016936.01.T01:CDS | 40.0% | |
| GCAGCAAAAGCAACAGTTAT+AGG | - | Chr3:89606769-89606788 | None:intergenic | 40.0% | |
| GTTCAAGGAGTGGATAAGAA+GGG | + | Chr3:89606739-89606758 | MsG0380016936.01.T01:CDS | 40.0% | |
| GTTTGCCTCCATATATCTCT+GGG | - | Chr3:89608302-89608321 | None:intergenic | 40.0% | |
| TATTGCAGACATTAAGGGCT+GGG | + | Chr3:89607943-89607962 | MsG0380016936.01.T01:CDS | 40.0% | |
| TCTCCAAAATAGGGTCTGTT+TGG | + | Chr3:89607028-89607047 | MsG0380016936.01.T01:intron | 40.0% | |
| TGGCATCCTGTCACATTATT+GGG | - | Chr3:89607900-89607919 | None:intergenic | 40.0% | |
| TGGCTAAAGAAGAAACCAAG+GGG | + | Chr3:89606047-89606066 | MsG0380016936.01.T01:CDS | 40.0% | |
| TGTTCAAGGAGTGGATAAGA+AGG | + | Chr3:89606738-89606757 | MsG0380016936.01.T01:CDS | 40.0% | |
| ! | GATACAAACTTTTCTTCCCC+TGG | - | Chr3:89607923-89607942 | None:intergenic | 40.0% |
| ! | TGTCCAAACAGACCCTATTT+TGG | - | Chr3:89607034-89607053 | None:intergenic | 40.0% |
| ! | TTTTCTTGTGCAAGATCGTC+AGG | - | Chr3:89606712-89606731 | None:intergenic | 40.0% |
| !! | AGACGGATTAATCAACTGCA+CGG | - | Chr3:89608420-89608439 | None:intergenic | 40.0% |
| !! | AGTTCTCATGAGGCTGATTT+TGG | - | Chr3:89606128-89606147 | None:intergenic | 40.0% |
| !! | TCAAGATGATGGAGCTTTGA+AGG | + | Chr3:89606081-89606100 | MsG0380016936.01.T01:CDS | 40.0% |
| AACAACTTTCCCAGTCTCTC+TGG | - | Chr3:89608031-89608050 | None:intergenic | 45.0% | |
| AATGCTGAATTTCCAGGCTC+AGG | - | Chr3:89606010-89606029 | None:intergenic | 45.0% | |
| AGATCGTCAGGTATCTCTGA+AGG | - | Chr3:89606700-89606719 | None:intergenic | 45.0% | |
| AGTCAATCCAAACACTGGGT+CGG | - | Chr3:89607354-89607373 | None:intergenic | 45.0% | |
| AGTCAGCTCCCAGAGATATA+TGG | + | Chr3:89608291-89608310 | MsG0380016936.01.T01:CDS | 45.0% | |
| ATGCTGAATTTCCAGGCTCA+GGG | - | Chr3:89606009-89606028 | None:intergenic | 45.0% | |
| ATTGCAGACATTAAGGGCTG+GGG | + | Chr3:89607944-89607963 | MsG0380016936.01.T01:CDS | 45.0% | |
| CCCGAAGTTTAAACCTTGCT+TGG | - | Chr3:89607081-89607100 | None:intergenic | 45.0% | |
| CTATTGCAGACATTAAGGGC+TGG | + | Chr3:89607942-89607961 | MsG0380016936.01.T01:CDS | 45.0% | |
| GATCGTCAGGTATCTCTGAA+GGG | - | Chr3:89606699-89606718 | None:intergenic | 45.0% | |
| GCTTACACCAACGAAAGAGA+CGG | - | Chr3:89608437-89608456 | None:intergenic | 45.0% | |
| GTGGCATCCTGTCACATTAT+TGG | - | Chr3:89607901-89607920 | None:intergenic | 45.0% | |
| TATGCAAACAGCGACATTCG+CGG | + | Chr3:89607968-89607987 | MsG0380016936.01.T01:CDS | 45.0% | |
| TGAGCCTGGAAATTCAGCAT+TGG | + | Chr3:89606009-89606028 | MsG0380016936.01.T01:CDS | 45.0% | |
| TTACCTTAGAAGAAGGGTCG+CGG | - | Chr3:89606162-89606181 | None:intergenic | 45.0% | |
| TTTAGGCATCTTGGCGTGTT+GGG | + | Chr3:89607328-89607347 | MsG0380016936.01.T01:intron | 45.0% | |
| ! | ACAAACTTTTCTTCCCCTGG+TGG | - | Chr3:89607920-89607939 | None:intergenic | 45.0% |
| ! | ATCGTCAGGTATCTCTGAAG+GGG | - | Chr3:89606698-89606717 | None:intergenic | 45.0% |
| ! | TTGAATTGAGCTTGATGGGC+AGG | + | Chr3:89606549-89606568 | MsG0380016936.01.T01:intron | 45.0% |
| ! | TTTTAGGCATCTTGGCGTGT+TGG | + | Chr3:89607327-89607346 | MsG0380016936.01.T01:intron | 45.0% |
| !! | AAGTTATAAATATTTATTAA+TGG | + | Chr3:89608381-89608400 | MsG0380016936.01.T01:three_prime_UTR | 5.0% |
| AATGTGACAGGATGCCACCA+GGG | + | Chr3:89607903-89607922 | MsG0380016936.01.T01:intron | 50.0% | |
| CAGCTCCCAGAGATATATGG+AGG | + | Chr3:89608294-89608313 | MsG0380016936.01.T01:CDS | 50.0% | |
| GAAGGGGATACAGAACCACT+TGG | - | Chr3:89606682-89606701 | None:intergenic | 50.0% | |
| TAAACCTTGCTTGGGTGGCT+TGG | - | Chr3:89607072-89607091 | None:intergenic | 50.0% | |
| TAATGTGACAGGATGCCACC+AGG | + | Chr3:89607902-89607921 | MsG0380016936.01.T01:intron | 50.0% | |
| ! | AATTGAGCTTGATGGGCAGG+AGG | + | Chr3:89606552-89606571 | MsG0380016936.01.T01:intron | 50.0% |
| !! | GTAGAATGGTTAGAGCACCG+AGG | - | Chr3:89607997-89608016 | None:intergenic | 50.0% |
| AAGCCGCGACCCTTCTTCTA+AGG | + | Chr3:89606156-89606175 | MsG0380016936.01.T01:CDS | 55.0% | |
| AGCGACATTCGCGGTTACCT+CGG | + | Chr3:89607977-89607996 | MsG0380016936.01.T01:CDS | 55.0% | |
| ATGTGACAGGATGCCACCAG+GGG | + | Chr3:89607904-89607923 | MsG0380016936.01.T01:intron | 55.0% | |
| AGGGTCTGTTTGGACAGGGC+CGG | + | Chr3:89607038-89607057 | MsG0380016936.01.T01:intron | 60.0% | |
| GAAACAGTGAGCCCTGAGCC+TGG | + | Chr3:89605995-89606014 | MsG0380016936.01.T01:CDS | 60.0% | |
| TGTTGGGCCGACCCAGTGTT+TGG | + | Chr3:89607344-89607363 | MsG0380016936.01.T01:intron | 60.0% | |
| AGGGCCAAGCCACCCAAGCA+AGG | + | Chr3:89607065-89607084 | MsG0380016936.01.T01:intron | 65.0% | |
| TTTGGACAGGGCCGGCCCAA+GGG | + | Chr3:89607046-89607065 | MsG0380016936.01.T01:intron | 65.0% | |
| ! | GCTTGGGTGGCTTGGCCCTT+GGG | - | Chr3:89607064-89607083 | None:intergenic | 65.0% |
| ! | TGCTTGGGTGGCTTGGCCCT+TGG | - | Chr3:89607065-89607084 | None:intergenic | 65.0% |
| GTTTGGACAGGGCCGGCCCA+AGG | + | Chr3:89607045-89607064 | MsG0380016936.01.T01:intron | 70.0% | |
| ! | GGGTGGCTTGGCCCTTGGGC+CGG | - | Chr3:89607060-89607079 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 89605956 | 89608661 | 89605956 | ID=MsG0380016936.01;Name=MsG0380016936.01 |
| Chr3 | mRNA | 89605956 | 89608661 | 89605956 | ID=MsG0380016936.01.T01;Parent=MsG0380016936.01;Name=MsG0380016936.01.T01;_AED=0.43;_eAED=0.43;_QI=36|0.75|0.8|1|0.75|0.8|5|311|291 |
| Chr3 | exon | 89605956 | 89606177 | 89605956 | ID=MsG0380016936.01.T01:exon:20555;Parent=MsG0380016936.01.T01 |
| Chr3 | exon | 89606571 | 89606889 | 89606571 | ID=MsG0380016936.01.T01:exon:20556;Parent=MsG0380016936.01.T01 |
| Chr3 | exon | 89607742 | 89607778 | 89607742 | ID=MsG0380016936.01.T01:exon:20557;Parent=MsG0380016936.01.T01 |
| Chr3 | exon | 89607913 | 89608129 | 89607913 | ID=MsG0380016936.01.T01:exon:20558;Parent=MsG0380016936.01.T01 |
| Chr3 | exon | 89608234 | 89608661 | 89608234 | ID=MsG0380016936.01.T01:exon:20559;Parent=MsG0380016936.01.T01 |
| Chr3 | five_prime_UTR | 89605956 | 89605991 | 89605956 | ID=MsG0380016936.01.T01:five_prime_utr;Parent=MsG0380016936.01.T01 |
| Chr3 | CDS | 89605992 | 89606177 | 89605992 | ID=MsG0380016936.01.T01:cds;Parent=MsG0380016936.01.T01 |
| Chr3 | CDS | 89606571 | 89606889 | 89606571 | ID=MsG0380016936.01.T01:cds;Parent=MsG0380016936.01.T01 |
| Chr3 | CDS | 89607742 | 89607778 | 89607742 | ID=MsG0380016936.01.T01:cds;Parent=MsG0380016936.01.T01 |
| Chr3 | CDS | 89607913 | 89608129 | 89607913 | ID=MsG0380016936.01.T01:cds;Parent=MsG0380016936.01.T01 |
| Chr3 | CDS | 89608234 | 89608350 | 89608234 | ID=MsG0380016936.01.T01:cds;Parent=MsG0380016936.01.T01 |
| Chr3 | three_prime_UTR | 89608351 | 89608661 | 89608351 | ID=MsG0380016936.01.T01:three_prime_utr;Parent=MsG0380016936.01.T01 |
| Gene Sequence |
| Protein sequence |
