AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015858.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015858.01.T01 MTR_3g078700 73.286 569 41 6 1 488 1 539 0.0 801
MsG0380015858.01.T01 MTR_3g078730 66.018 565 88 6 1 488 1 538 0.0 721
MsG0380015858.01.T01 MTR_3g078740 60.611 589 130 12 1 488 1 588 0.0 653
MsG0380015858.01.T01 MTR_8g091390 41.865 547 240 8 17 487 26 570 9.40e-147 432
MsG0380015858.01.T01 MTR_5g081810 30.435 506 262 17 40 467 14 507 2.57e-54 191
MsG0380015858.01.T01 MTR_7g058690 29.749 558 278 18 7 465 14 556 3.43e-54 191
MsG0380015858.01.T01 MTR_5g069680 30.741 540 291 17 4 468 6 537 7.85e-54 190
MsG0380015858.01.T01 MTR_5g020620 28.782 542 301 18 1 467 8 539 1.45e-52 186
MsG0380015858.01.T01 MTR_5g073210 29.740 538 290 18 9 464 4 535 1.56e-51 184
MsG0380015858.01.T01 MTR_5g083360 28.546 557 296 19 1 467 1 545 1.10e-50 181
MsG0380015858.01.T01 MTR_5g020600 28.345 568 310 19 1 484 12 566 4.46e-50 180
MsG0380015858.01.T01 MTR_3g101635 28.339 554 298 17 1 467 3 544 7.70e-47 171
MsG0380015858.01.T01 MTR_3g079660 74.444 90 23 0 399 488 5 94 1.86e-42 146
MsG0380015858.01.T01 MTR_3g071890 28.277 534 274 21 2 445 12 526 5.38e-42 157
MsG0380015858.01.T01 MTR_5g081790 28.755 466 256 18 6 447 7 420 4.39e-40 150
MsG0380015858.01.T01 MTR_7g065970 26.394 538 301 17 18 467 18 548 4.30e-38 147
MsG0380015858.01.T01 MTR_8g479390 25.607 535 299 19 25 488 31 537 1.18e-37 145
MsG0380015858.01.T01 MTR_4g132320 26.549 565 305 23 2 488 6 538 4.39e-35 138
MsG0380015858.01.T01 MTR_5g018270 27.170 530 288 21 25 485 31 531 5.93e-34 134
MsG0380015858.01.T01 MTR_3g115050 24.194 558 319 20 6 488 9 537 8.00e-34 134
MsG0380015858.01.T01 MTR_2g009230 91.667 60 5 0 130 189 1 60 4.55e-33 120
MsG0380015858.01.T01 MTR_4g049390 25.139 541 289 18 25 485 27 531 7.56e-33 131
MsG0380015858.01.T01 MTR_8g479380 26.104 498 291 19 48 485 52 532 1.06e-31 128
MsG0380015858.01.T01 MTR_4g048350 24.578 533 301 18 25 485 27 530 3.17e-31 127
MsG0380015858.01.T01 MTR_4g075690 23.660 541 296 17 25 485 30 533 1.91e-30 124
MsG0380015858.01.T01 MTR_1g090707 25.714 490 270 16 44 462 43 509 4.84e-30 124
MsG0380015858.01.T01 MTR_2g088080 24.112 535 302 18 25 485 30 534 2.61e-29 121
MsG0380015858.01.T01 MTR_4g015120 40.120 167 95 3 302 467 373 535 1.19e-28 119
MsG0380015858.01.T01 MTR_4g015120 31.538 260 150 9 7 247 9 259 2.53e-28 118
MsG0380015858.01.T01 MTR_4g083190 24.377 562 324 21 1 485 1 538 1.81e-28 119
MsG0380015858.01.T01 MTR_3g083440 25.179 560 307 22 7 485 8 536 8.99e-28 117
MsG0380015858.01.T01 MTR_3g083390 25.442 566 298 24 7 485 8 536 1.19e-27 116
MsG0380015858.01.T01 MTR_2g008330 35.865 237 123 10 250 467 331 557 1.24e-27 116
MsG0380015858.01.T01 MTR_2g008330 30.588 255 152 9 12 247 25 273 7.34e-22 99.4
MsG0380015858.01.T01 MTR_3g083450 25.508 541 292 21 26 485 27 537 2.88e-27 115
MsG0380015858.01.T01 MTR_7g060460 32.210 267 154 9 2 247 8 268 2.89e-27 115
MsG0380015858.01.T01 MTR_7g060460 35.398 226 122 8 257 463 335 555 5.11e-24 105
MsG0380015858.01.T01 MTR_3g083400 25.179 560 307 22 7 485 8 536 3.45e-27 115
MsG0380015858.01.T01 MTR_3g083430 25.442 566 298 24 7 485 8 536 1.15e-26 113
MsG0380015858.01.T01 MTR_7g062250 31.923 260 152 10 7 247 16 269 2.69e-26 112
MsG0380015858.01.T01 MTR_7g062250 29.231 260 141 7 257 484 330 578 1.43e-20 95.1
MsG0380015858.01.T01 MTR_7g458880 31.559 263 156 7 4 247 11 268 2.76e-26 112
MsG0380015858.01.T01 MTR_7g458880 33.333 228 123 7 257 463 335 554 1.89e-23 103
MsG0380015858.01.T01 MTR_4g101650 24.138 551 297 19 27 485 29 550 5.79e-26 111
MsG0380015858.01.T01 MTR_3g083410 25.434 519 276 22 48 485 12 500 1.10e-25 110
MsG0380015858.01.T01 MTR_3g462760 40.373 161 91 3 309 468 379 535 2.29e-25 109
MsG0380015858.01.T01 MTR_3g462760 31.349 252 134 8 22 247 23 261 2.43e-23 103
MsG0380015858.01.T01 MTR_4g064530 37.118 229 113 10 257 463 340 559 4.60e-25 108
MsG0380015858.01.T01 MTR_4g064530 30.147 272 155 11 3 245 11 276 4.12e-23 103
MsG0380015858.01.T01 MTR_7g062310 38.235 170 101 2 308 476 414 580 2.94e-24 106
MsG0380015858.01.T01 MTR_7g062310 30.172 348 203 12 21 343 43 375 1.07e-23 104
MsG0380015858.01.T01 MTR_4g083210 25.093 538 294 23 26 485 26 532 3.37e-24 106
MsG0380015858.01.T01 MTR_3g008580 22.794 544 293 18 37 485 41 552 1.87e-23 103
MsG0380015858.01.T01 MTR_4g064530 30.147 272 155 11 3 245 11 276 2.93e-23 103
MsG0380015858.01.T01 MTR_4g064530 35.616 219 110 10 257 453 340 549 8.44e-19 89.7
MsG0380015858.01.T01 MTR_8g027375 31.799 239 140 10 25 245 34 267 8.52e-23 102
MsG0380015858.01.T01 MTR_8g027375 33.333 189 111 5 286 467 369 549 1.71e-21 98.2
MsG0380015858.01.T01 MTR_3g101640 36.842 171 99 6 302 467 383 549 8.06e-22 99.0
MsG0380015858.01.T01 MTR_3g101640 30.769 273 155 12 1 247 1 265 4.08e-18 87.8
MsG0380015858.01.T01 MTR_7g065980 29.185 233 140 4 257 467 320 549 2.00e-20 94.7
MsG0380015858.01.T01 MTR_7g065980 28.409 264 161 11 3 247 4 258 3.46e-20 94.0
MsG0380015858.01.T01 MTR_4g019225 33.721 172 105 5 24 193 25 189 4.88e-20 93.6
MsG0380015858.01.T01 MTR_4g019225 41.905 105 58 1 363 467 449 550 1.22e-19 92.4
MsG0380015858.01.T01 MTR_4g075690 23.431 478 253 18 1 403 8 447 3.88e-19 90.1
MsG0380015858.01.T01 MTR_2g088080 22.245 481 271 17 79 485 2 453 2.63e-18 87.8
MsG0380015858.01.T01 MTR_7g051440 34.899 149 92 5 26 172 30 175 1.21e-15 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015858.01.T01 AT5G21105 53.169 568 185 6 1 487 11 578 0.0 595
MsG0380015858.01.T01 AT5G21100 53.176 551 175 9 17 487 16 563 0.0 558
MsG0380015858.01.T01 AT5G21105 52.083 528 172 6 1 447 11 538 0.0 532
MsG0380015858.01.T01 AT4G39830 41.696 566 244 9 7 487 16 580 2.29e-151 444
MsG0380015858.01.T01 AT5G21105 55.272 313 94 1 221 487 75 387 1.30e-121 362
MsG0380015858.01.T01 AT4G39830 40.580 483 205 7 87 487 3 485 1.03e-119 360
MsG0380015858.01.T01 AT4G39830 40.456 482 205 7 88 487 2 483 5.99e-119 358
MsG0380015858.01.T01 AT4G39830 38.509 483 202 8 87 487 3 472 1.05e-106 326
MsG0380015858.01.T01 AT5G05390 27.907 559 295 17 1 467 1 543 9.32e-52 184
MsG0380015858.01.T01 AT5G09360 28.520 554 291 18 1 467 12 547 3.47e-49 177
MsG0380015858.01.T01 AT2G29130 29.032 558 285 18 1 463 6 547 6.18e-48 174
MsG0380015858.01.T01 AT2G38080 29.049 568 298 21 8 484 5 558 2.37e-46 169
MsG0380015858.01.T01 AT5G01040 27.273 550 290 19 10 467 13 544 3.17e-45 167
MsG0380015858.01.T01 AT4G37160 24.427 524 310 16 27 485 33 535 2.07e-33 133
MsG0380015858.01.T01 AT5G66920 25.703 498 273 16 25 455 37 504 1.48e-32 130
MsG0380015858.01.T01 AT1G75790 25.133 565 317 20 4 485 1 542 3.35e-32 129
MsG0380015858.01.T01 AT4G22010 25.421 535 296 19 25 485 26 531 3.88e-32 129
MsG0380015858.01.T01 AT1G21860 24.769 541 317 16 16 488 16 534 1.75e-31 127
MsG0380015858.01.T01 AT1G55570 26.617 541 287 23 26 485 30 541 1.84e-31 127
MsG0380015858.01.T01 AT5G60020 25.997 577 285 22 1 463 3 551 2.56e-31 127
MsG0380015858.01.T01 AT2G23630 24.665 523 309 14 27 485 32 533 5.32e-31 126
MsG0380015858.01.T01 AT2G23630 24.665 523 309 14 27 485 37 538 6.63e-31 126
MsG0380015858.01.T01 AT4G28090 24.640 556 317 20 9 488 9 538 3.45e-30 124
MsG0380015858.01.T01 AT1G21850 24.909 550 324 20 4 485 3 531 6.32e-30 123
MsG0380015858.01.T01 AT4G12420 24.270 548 306 21 27 488 27 551 6.71e-30 123
MsG0380015858.01.T01 AT4G12420 24.270 548 306 21 27 488 27 551 6.71e-30 123
MsG0380015858.01.T01 AT3G13390 27.122 542 283 25 26 485 29 540 7.23e-30 123
MsG0380015858.01.T01 AT1G76160 23.280 567 316 18 5 488 4 534 1.42e-29 122
MsG0380015858.01.T01 AT5G48450 23.498 566 314 19 9 485 8 543 3.70e-28 118
MsG0380015858.01.T01 AT5G48450 23.498 566 314 19 9 485 8 543 4.46e-28 118
MsG0380015858.01.T01 AT5G60020 25.836 538 259 20 40 463 8 519 6.56e-28 117
MsG0380015858.01.T01 AT5G03260 37.278 169 100 3 302 468 372 536 5.53e-27 114
MsG0380015858.01.T01 AT5G03260 30.385 260 154 10 7 245 6 259 1.44e-21 98.2
MsG0380015858.01.T01 AT5G51480 24.007 554 296 23 27 486 30 552 7.99e-27 114
MsG0380015858.01.T01 AT5G58910 41.358 162 90 3 308 467 343 501 1.35e-26 113
MsG0380015858.01.T01 AT5G58910 27.074 229 131 10 40 247 8 221 1.14e-14 76.6
MsG0380015858.01.T01 AT5G58910 41.358 162 90 3 308 467 387 545 1.94e-26 113
MsG0380015858.01.T01 AT5G58910 29.796 245 143 9 24 247 29 265 1.21e-23 104
MsG0380015858.01.T01 AT5G58910 41.358 162 90 3 308 467 386 544 1.99e-26 113
MsG0380015858.01.T01 AT5G58910 30.204 245 141 10 24 247 29 264 1.08e-22 101
MsG0380015858.01.T01 AT2G46570 32.510 243 139 9 22 245 29 265 3.74e-26 112
MsG0380015858.01.T01 AT2G46570 34.911 169 91 7 308 467 389 547 2.09e-19 91.7
MsG0380015858.01.T01 AT1G41830 21.818 550 333 17 6 485 10 532 4.81e-26 111
MsG0380015858.01.T01 AT5G07130 33.824 272 140 12 1 245 1 259 1.74e-25 110
MsG0380015858.01.T01 AT5G07130 36.782 174 102 4 298 467 378 547 1.15e-24 107
MsG0380015858.01.T01 AT4G38420 22.628 548 306 20 25 488 30 543 4.71e-25 108
MsG0380015858.01.T01 AT5G07130 36.782 174 102 4 298 467 293 462 6.94e-25 107
MsG0380015858.01.T01 AT5G07130 36.782 174 102 4 298 467 293 462 6.94e-25 107
MsG0380015858.01.T01 AT4G25240 26.064 564 318 25 4 486 7 552 1.09e-24 107
MsG0380015858.01.T01 AT4G25240 26.064 564 318 25 4 486 7 552 1.09e-24 107
MsG0380015858.01.T01 AT1G18140 31.429 245 147 8 20 247 24 264 1.65e-24 107
MsG0380015858.01.T01 AT1G18140 36.810 163 97 3 308 467 400 559 1.20e-22 101
MsG0380015858.01.T01 AT2G30210 33.469 245 142 10 21 247 22 263 2.20e-24 107
MsG0380015858.01.T01 AT2G30210 32.456 228 132 6 257 467 326 548 7.62e-24 105
MsG0380015858.01.T01 AT5G01190 35.233 193 113 5 300 484 370 558 2.73e-24 106
MsG0380015858.01.T01 AT5G01190 30.705 241 146 9 24 247 24 260 2.48e-19 91.3
MsG0380015858.01.T01 AT5G01190 35.233 193 113 5 300 484 356 544 3.06e-24 106
MsG0380015858.01.T01 AT5G01190 31.364 220 130 9 45 247 31 246 3.26e-17 84.7
MsG0380015858.01.T01 AT2G40370 29.104 268 161 7 1 245 1 262 7.34e-24 105
MsG0380015858.01.T01 AT2G40370 29.130 230 139 4 257 467 334 558 7.52e-23 102
MsG0380015858.01.T01 AT4G37160 24.256 437 251 14 27 403 33 449 6.42e-23 101
MsG0380015858.01.T01 AT5G01050 37.956 137 74 2 339 467 413 546 9.27e-23 102
MsG0380015858.01.T01 AT5G01050 28.800 250 153 8 10 243 13 253 1.24e-19 92.4
MsG0380015858.01.T01 AT3G09220 29.084 251 161 6 12 247 13 261 9.65e-23 102
MsG0380015858.01.T01 AT3G09220 38.971 136 72 4 339 467 414 545 6.36e-21 96.3
MsG0380015858.01.T01 AT5G60020 30.075 266 159 10 1 247 3 260 1.76e-21 97.8
MsG0380015858.01.T01 AT5G60020 36.986 146 78 6 308 447 398 535 3.90e-14 75.1
MsG0380015858.01.T01 AT5G48100 29.528 254 152 9 14 247 11 257 2.76e-21 97.4
MsG0380015858.01.T01 AT5G48100 31.441 229 134 8 257 467 318 541 9.66e-21 95.9
MsG0380015858.01.T01 AT3G09220 38.849 139 68 3 339 467 317 448 4.76e-21 96.3
MsG0380015858.01.T01 AT1G55560 23.897 544 289 20 30 485 31 537 2.72e-20 94.4
MsG0380015858.01.T01 AT3G13400 24.022 537 305 21 26 485 28 538 4.21e-20 94.0
MsG0380015858.01.T01 AT3G13400 24.022 537 305 21 26 485 28 538 4.21e-20 94.0
MsG0380015858.01.T01 AT2G46570 34.911 169 91 7 308 467 304 462 2.06e-19 91.3
MsG0380015858.01.T01 AT2G46570 31.319 182 101 8 83 245 4 180 3.76e-13 72.0
MsG0380015858.01.T01 AT4G38420 22.016 486 266 18 25 431 30 481 2.39e-16 82.0
MsG0380015858.01.T01 AT4G38420 22.052 458 245 17 25 403 30 454 2.24e-14 75.5

Find 142 sgRNAs with CRISPR-Local

Find 399 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCGGTAGTTTCACTAAA+TGG 0.163317 3:+75953886 MsG0380015858.01.T01:CDS
TCCAATTTGGTCCCCATAAT+TGG 0.164726 3:-75953199 None:intergenic
TATTTCTATCATGGACATTT+TGG 0.179942 3:+75949499 MsG0380015858.01.T01:CDS
CAAAATGCAAACCAGTTAAA+TGG 0.189861 3:+75954116 MsG0380015858.01.T01:CDS
ACAATCTGACTATCCAATTA+TGG 0.190459 3:+75953186 MsG0380015858.01.T01:CDS
CCGTTACCGGTAGTTGTATT+TGG 0.192418 3:-75954050 None:intergenic
TGCTCAGAGATTTAGTCTTT+TGG 0.198324 3:-75948735 None:intergenic
AAAACAAATCATTTCCAAAA+TGG 0.220018 3:+75953803 MsG0380015858.01.T01:CDS
TTGGACTGCATTAAGGTTTA+AGG 0.221108 3:+75954292 MsG0380015858.01.T01:CDS
TCCAATTATGGGGACCAAAT+TGG 0.239063 3:+75953198 MsG0380015858.01.T01:CDS
CATATGGTTGGACTGCATTA+AGG 0.257525 3:+75954285 MsG0380015858.01.T01:CDS
TGGCTGTGGAGTTCCCATTT+TGG 0.285078 3:-75953817 None:intergenic
GTAGTTGTATTTGGATTAAC+TGG 0.289880 3:-75954041 None:intergenic
TTTGTTTGGTGCATATGGTT+AGG 0.295869 3:+75948797 MsG0380015858.01.T01:CDS
AGGCAGATAACCCTGGTGTT+TGG 0.311229 3:+75954312 MsG0380015858.01.T01:CDS
CACTACCATTCCCATTTAAC+TGG 0.315490 3:-75954127 None:intergenic
GGCAGATAACCCTGGTGTTT+GGG 0.315629 3:+75954313 MsG0380015858.01.T01:CDS
AATGGCTCTCTTTGTTCCTT+TGG 0.323053 3:-75949568 None:intergenic
CATTGAACCACATTTGCATA+TGG 0.333948 3:+75954349 MsG0380015858.01.T01:CDS
CTGAGGCTGTTCATAAAGTT+AGG 0.336809 3:+75954390 MsG0380015858.01.T01:CDS
TGAGCACACCCAATCCAATT+TGG 0.342178 3:-75953212 None:intergenic
GGAATCAATGGCCAGTTTCC+AGG 0.342868 3:+75948914 MsG0380015858.01.T01:CDS
CACCACCAGTCACACCCTTA+TGG 0.345496 3:+75953751 MsG0380015858.01.T01:CDS
GTTCACCAATCCATCTCATT+GGG 0.346982 3:-75949675 None:intergenic
TAATAGTTGGGCCTGGAAAC+TGG 0.350475 3:-75948925 None:intergenic
TTGTTTGGTGCATATGGTTA+GGG 0.369163 3:+75948798 MsG0380015858.01.T01:CDS
GAAAAGTTGAATTTAAATCT+TGG 0.373668 3:+75953143 MsG0380015858.01.T01:CDS
AAACGTGTAAACACCGTTAC+CGG 0.380846 3:-75954063 None:intergenic
TTAACTTCAGCTTTAATAGT+TGG 0.382060 3:-75948938 None:intergenic
TAACTTCAGCTTTAATAGTT+GGG 0.385140 3:-75948937 None:intergenic
CAATCTGACTATCCAATTAT+GGG 0.386837 3:+75953187 MsG0380015858.01.T01:CDS
CCACACTTAAGAGCTTCTTT+AGG 0.398032 3:-75954419 None:intergenic
GAAGGATTGTATGTATATAT+AGG 0.401269 3:-75948683 None:intergenic
CTGTATTGAAAAGTTTCTCC+TGG 0.402941 3:-75949199 None:intergenic
TTTGCAGTTTGGAACTCCTT+GGG 0.403133 3:+75949138 MsG0380015858.01.T01:intron
ACAACATGCTCCACACAATC+TGG 0.411894 3:-75948887 None:intergenic
GTGTTCGGTATCGTTCCATA+AGG 0.413714 3:-75953766 None:intergenic
CTCAATACACAAAACAAAAT+CGG 0.415806 3:+75953870 MsG0380015858.01.T01:CDS
GTGACTGGTGGTGGTAATGT+TGG 0.417838 3:-75953741 None:intergenic
AAACAAATCATTTCCAAAAT+GGG 0.418944 3:+75953804 MsG0380015858.01.T01:CDS
TTTGGAACTCCTTGGGCTGA+TGG 0.420214 3:+75949145 MsG0380015858.01.T01:CDS
ACTGCAGTTATATTTCCATA+TGG 0.422579 3:+75954269 MsG0380015858.01.T01:CDS
TCCTTCTGTATGGAGCTTGT+TGG 0.424095 3:-75948984 None:intergenic
AATACAGATTCAAAGTTGAC+AGG 0.425137 3:+75949215 MsG0380015858.01.T01:CDS
ATTTGAAACGTGCACCTTTG+AGG 0.427034 3:+75954243 MsG0380015858.01.T01:CDS
AACTCACCATCATAATGAAA+TGG 0.432896 3:-75949586 None:intergenic
CTTAATGCAGTCCAACCATA+TGG 0.434255 3:-75954284 None:intergenic
GGTTCACCAATCCATCTCAT+TGG 0.437708 3:-75949676 None:intergenic
AATTTGATTGATCCTAAGTA+AGG 0.437892 3:-75953945 None:intergenic
AATCGGTAGTTTCACTAAAT+GGG 0.438520 3:+75953887 MsG0380015858.01.T01:CDS
TGTGAATGCTTTGCTGTGTT+CGG 0.443250 3:-75953781 None:intergenic
GTTTGCAGTTTGGAACTCCT+TGG 0.444823 3:+75949137 MsG0380015858.01.T01:intron
AAAATGCAAACCAGTTAAAT+GGG 0.447011 3:+75954117 MsG0380015858.01.T01:CDS
CAAAGAGCAGCAGGGCTGTA+TGG 0.448009 3:+75949526 MsG0380015858.01.T01:CDS
CAGTTATATTTCCATATGGT+TGG 0.450338 3:+75954273 MsG0380015858.01.T01:CDS
AGAGAGCCATTTCATTATGA+TGG 0.456007 3:+75949580 MsG0380015858.01.T01:CDS
TTGCCAACCACACCTTACTT+AGG 0.459014 3:+75953933 MsG0380015858.01.T01:CDS
GAATAACAGTTCCTTCTGTA+TGG 0.465247 3:-75948994 None:intergenic
TTAAATATGTCATAATCCAT+TGG 0.467428 3:-75954014 None:intergenic
ATTGAACCACATTTGCATAT+GGG 0.467926 3:+75954350 MsG0380015858.01.T01:CDS
TTTGGTATGCAAAGAGCAGC+AGG 0.470698 3:+75949517 MsG0380015858.01.T01:CDS
TATGGGGACCAAATTGGATT+GGG 0.471686 3:+75953204 MsG0380015858.01.T01:CDS
CCTGGTACATATTTCTATCA+TGG 0.478578 3:+75949490 MsG0380015858.01.T01:CDS
AGTTGAATTTAAATCTTGGT+TGG 0.481490 3:+75953147 MsG0380015858.01.T01:CDS
TAATCCATTGGAAATCTCTC+TGG 0.486255 3:-75954002 None:intergenic
CAATGGAATGCCCAAACACC+AGG 0.492231 3:-75954323 None:intergenic
TTATGGGGACCAAATTGGAT+TGG 0.495836 3:+75953203 MsG0380015858.01.T01:CDS
TCAGCTTTAATAGTTGGGCC+TGG 0.499380 3:-75948932 None:intergenic
TGTGAGGATTTCGGTGGCTG+TGG 0.503552 3:-75953831 None:intergenic
TGTTCGGTATCGTTCCATAA+GGG 0.510120 3:-75953765 None:intergenic
GTTGTTAAAATAATGACCAC+GGG 0.510799 3:+75948600 MsG0380015858.01.T01:five_prime_UTR
TCTATAAATGAAATGAAAGA+AGG 0.511625 3:-75948701 None:intergenic
TCAGAATCACAAACTTATTG+TGG 0.512257 3:+75953516 MsG0380015858.01.T01:intron
CATAAGGGTGTGACTGGTGG+TGG 0.513495 3:-75953750 None:intergenic
ATCGTGCGGTGTGAGGATTT+CGG 0.515283 3:-75953840 None:intergenic
TCAGCCCCAATGAGATGGAT+TGG 0.516747 3:+75949670 MsG0380015858.01.T01:CDS
GCTGTATGGTTCTCTAATAG+TGG 0.517469 3:+75949540 MsG0380015858.01.T01:CDS
ACCACATTTGCATATGGGAA+TGG 0.518745 3:+75954355 MsG0380015858.01.T01:CDS
ATTGGAAATCTCTCTGGTGG+TGG 0.520673 3:-75953996 None:intergenic
CTTATTGTGGTGGAAGCAGA+TGG 0.523378 3:+75953529 MsG0380015858.01.T01:CDS
ATCTGCTCCTTAGTGATCTG+TGG 0.529687 3:+75949611 MsG0380015858.01.T01:CDS
CCAAATACAACTACCGGTAA+CGG 0.532128 3:+75954050 MsG0380015858.01.T01:CDS
TCTCTTCAGCCCCAATGAGA+TGG 0.532184 3:+75949665 MsG0380015858.01.T01:CDS
TTGTACCGTTAACATTGCCT+AGG 0.532564 3:-75948634 None:intergenic
CAGAAGGAACTGTTATTCAC+TGG 0.535040 3:+75948999 MsG0380015858.01.T01:CDS
GTTAATCCAAATACAACTAC+CGG 0.535206 3:+75954044 MsG0380015858.01.T01:CDS
GACAGCCTAGGCAATGTTAA+CGG 0.543265 3:+75948629 MsG0380015858.01.T01:five_prime_UTR
TCTCAGTGTGCTATAAATCC+AGG 0.546219 3:+75949181 MsG0380015858.01.T01:CDS
CTGTATGGAGCTTGTTGGTG+AGG 0.546569 3:-75948979 None:intergenic
TCGTTCCATAAGGGTGTGAC+TGG 0.548390 3:-75953756 None:intergenic
GCAAACCAGTTAAATGGGAA+TGG 0.548393 3:+75954122 MsG0380015858.01.T01:CDS
CCACATTTGCATATGGGAAT+GGG 0.550546 3:+75954356 MsG0380015858.01.T01:CDS
CCCATTCCCATATGCAAATG+TGG 0.553246 3:-75954356 None:intergenic
ATTCATCCATGGCATTTGCA+TGG 0.556495 3:+75954152 MsG0380015858.01.T01:CDS
CATGTTGTGATGGGAATCAA+TGG 0.556686 3:+75948902 MsG0380015858.01.T01:CDS
GGAACTGTTATTCACTGGCA+TGG 0.556886 3:+75949004 MsG0380015858.01.T01:CDS
CCATGATAGAAATATGTACC+AGG 0.570980 3:-75949490 None:intergenic
CGATGTCATCAACTGCGAAT+GGG 0.572651 3:-75953564 None:intergenic
TTGTGTGGAGCATGTTGTGA+TGG 0.577399 3:+75948892 MsG0380015858.01.T01:CDS
GATCCTAAGTAAGGTGTGGT+TGG 0.579576 3:-75953936 None:intergenic
GAATCACAAACTTATTGTGG+TGG 0.579698 3:+75953519 MsG0380015858.01.T01:intron
ATCTCATTGGGGCTGAAGAG+AGG 0.581211 3:-75949663 None:intergenic
ACCACCAGAGAGATTTCCAA+TGG 0.581481 3:+75953998 MsG0380015858.01.T01:CDS
TCTAATAGTGGATTTACCAA+AGG 0.582956 3:+75949552 MsG0380015858.01.T01:CDS
GAGATGGATTGGTGAACCAC+AGG 0.584866 3:+75949681 MsG0380015858.01.T01:CDS
TCGATGTCATCAACTGCGAA+TGG 0.586686 3:-75953565 None:intergenic
ATAACTGCAGTGTTCCTCAA+AGG 0.587942 3:-75954257 None:intergenic
TCACTGGCATGGAATCAGAC+AGG 0.589797 3:+75949015 MsG0380015858.01.T01:CDS
TGTTGTTAAAATAATGACCA+CGG 0.591429 3:+75948599 MsG0380015858.01.T01:five_prime_UTR
CACAAGCTCACATGAACAAG+AGG 0.595059 3:+75949636 MsG0380015858.01.T01:CDS
TTACACGTTTCAGTTGAATG+AGG 0.598282 3:+75954076 MsG0380015858.01.T01:CDS
GAGGAGAATCGTGCGGTGTG+AGG 0.599110 3:-75953847 None:intergenic
TGTGTGGAGCATGTTGTGAT+GGG 0.602225 3:+75948893 MsG0380015858.01.T01:CDS
AGGTTTAAGGCAGATAACCC+TGG 0.609626 3:+75954305 MsG0380015858.01.T01:CDS
AATCTGACTATCCAATTATG+GGG 0.611978 3:+75953188 MsG0380015858.01.T01:CDS
TCATGTCCATGCAAATGCCA+TGG 0.613062 3:-75954158 None:intergenic
GATGACATCGACATCTACTC+AGG 0.614053 3:+75953577 MsG0380015858.01.T01:CDS
ATACAGATTCAAAGTTGACA+GGG 0.614232 3:+75949216 MsG0380015858.01.T01:CDS
TTGTGTGCCACAGATCACTA+AGG 0.616013 3:-75949618 None:intergenic
AGCTCACATGAACAAGAGGT+TGG 0.616753 3:+75949640 MsG0380015858.01.T01:CDS
ACCAACAAGCTCCATACAGA+AGG 0.620491 3:+75948983 MsG0380015858.01.T01:CDS
TTCCATAAGGGTGTGACTGG+TGG 0.624649 3:-75953753 None:intergenic
TCCATTGGAAATCTCTCTGG+TGG 0.626333 3:-75953999 None:intergenic
CCTAAAGAAGCTCTTAAGTG+TGG 0.626917 3:+75954419 MsG0380015858.01.T01:CDS
ATGTATATATAGGAACTAAG+TGG 0.629683 3:-75948673 None:intergenic
ATGGTAGTGAAATTCATCCA+TGG 0.631220 3:+75954141 MsG0380015858.01.T01:CDS
TTCACCAATCCATCTCATTG+GGG 0.642456 3:-75949674 None:intergenic
GCAGCAGTTCCATCAGCCCA+AGG 0.643166 3:-75949154 None:intergenic
TATATATAGGAACTAAGTGG+AGG 0.653363 3:-75948670 None:intergenic
TTGGTATGCAAAGAGCAGCA+GGG 0.660158 3:+75949518 MsG0380015858.01.T01:CDS
AATGTGGTTCAATGTGACAA+TGG 0.664380 3:-75954340 None:intergenic
CACGGGGTATGTGACAGCCT+AGG 0.670707 3:+75948617 MsG0380015858.01.T01:five_prime_UTR
GATTGATCCTAAGTAAGGTG+TGG 0.679397 3:-75953940 None:intergenic
TGGGTGTGCTCAAAGCACCA+TGG 0.682944 3:+75953223 MsG0380015858.01.T01:CDS
TGTTGGTGAGGTCAATGACA+AGG 0.689203 3:-75948967 None:intergenic
GTGCGGTGTGAGGATTTCGG+TGG 0.702906 3:-75953837 None:intergenic
CTAGGCTGTCACATACCCCG+TGG 0.705901 3:-75948616 None:intergenic
AATGGAATGCCCAAACACCA+GGG 0.708938 3:-75954322 None:intergenic
GTTGGTGAGGTCAATGACAA+GGG 0.718919 3:-75948966 None:intergenic
GGTGAAGGGAGATTTAGACC+AGG 0.724991 3:+75954200 MsG0380015858.01.T01:CDS
TATTGAGGAGGAGAATCGTG+CGG 0.763434 3:-75953854 None:intergenic
TTGTTAAAATAATGACCACG+GGG 0.776265 3:+75948601 MsG0380015858.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATAAAAATTGAAAATT+GGG + Chr3:75950390-75950409 MsG0380015858.01.T01:intron 10.0%
!! GATATTTAAAAAAGAATAAA+TGG - Chr3:75952311-75952330 None:intergenic 10.0%
!! TACATATATATAATATTAAC+TGG + Chr3:75949446-75949465 MsG0380015858.01.T01:intron 10.0%
!! TAGAAATAAAAATTGAAAAT+TGG + Chr3:75950389-75950408 MsG0380015858.01.T01:intron 10.0%
!!! AAATTTTTCTACTTTTTTTT+TGG + Chr3:75951087-75951106 MsG0380015858.01.T01:intron 10.0%
!!! GTTTTATTAAAAATGTTATT+TGG - Chr3:75953288-75953307 None:intergenic 10.0%
!!! TAAATATCATAGTTTTTTTT+TGG + Chr3:75952323-75952342 MsG0380015858.01.T01:intron 10.0%
!!! TTTATAGAATTATTTTTTGT+TGG - Chr3:75952686-75952705 None:intergenic 10.0%
!! ACTATATTATCATTCATAAA+AGG - Chr3:75951470-75951489 None:intergenic 15.0%
!! ATATTTAATTATAACTAGAC+TGG - Chr3:75949082-75949101 None:intergenic 15.0%
!! CTTAAAAAAAAAATATGAAC+TGG + Chr3:75951061-75951080 MsG0380015858.01.T01:intron 15.0%
!! GTTTAATATATAAAGATAGT+GGG - Chr3:75950626-75950645 None:intergenic 15.0%
!! TATATAATATAATTAGAGCT+AGG + Chr3:75949423-75949442 MsG0380015858.01.T01:intron 15.0%
!! TATATATAATATTAACTGGT+TGG + Chr3:75949450-75949469 MsG0380015858.01.T01:intron 15.0%
!! TGTTTAATATATAAAGATAG+TGG - Chr3:75950627-75950646 None:intergenic 15.0%
!! TTGTCTTGATTAAAATTTAA+AGG - Chr3:75951210-75951229 None:intergenic 15.0%
!!! AAAAAAACTTTAACTTCAAT+AGG + Chr3:75952281-75952300 MsG0380015858.01.T01:intron 15.0%
!!! AATGAATGTATAAAATTTTG+AGG + Chr3:75948528-75948547 MsG0380015858.01.T01:five_prime_UTR 15.0%
!!! AGTATTATTTTTCATTCTTT+TGG + Chr3:75951328-75951347 MsG0380015858.01.T01:intron 15.0%
!!! TATTTTGCATATCATTATTA+GGG + Chr3:75951836-75951855 MsG0380015858.01.T01:intron 15.0%
!!! TTGAAAAAATGTTTTAGATA+TGG + Chr3:75952147-75952166 MsG0380015858.01.T01:intron 15.0%
!!! TTTAATAAAAGTACCTATTA+AGG + Chr3:75950539-75950558 MsG0380015858.01.T01:intron 15.0%
!!! TTTATTACTTTTTTAAACGT+GGG + Chr3:75950740-75950759 MsG0380015858.01.T01:intron 15.0%
!!! TTTTAAAGCATAATAACTTT+TGG + Chr3:75950155-75950174 MsG0380015858.01.T01:intron 15.0%
!!! TTTTATTACTTTTTTAAACG+TGG + Chr3:75950739-75950758 MsG0380015858.01.T01:intron 15.0%
!! AAAAAAAAAATTGACAAGTG+GGG - Chr3:75950998-75951017 None:intergenic 20.0%
!! AAAACAAATCATTTCCAAAA+TGG + Chr3:75953803-75953822 MsG0380015858.01.T01:CDS 20.0%
!! AAACAAATCATTTCCAAAAT+GGG + Chr3:75953804-75953823 MsG0380015858.01.T01:CDS 20.0%
!! AACATATATCATATATGTAG+TGG - Chr3:75951731-75951750 None:intergenic 20.0%
!! AACTTCACGTTAAATTATTT+AGG + Chr3:75953121-75953140 MsG0380015858.01.T01:intron 20.0%
!! AATTGTAAGTTAATATGAAC+TGG + Chr3:75951159-75951178 MsG0380015858.01.T01:intron 20.0%
!! ACATATATCATATATGTAGT+GGG - Chr3:75951730-75951749 None:intergenic 20.0%
!! ACATCATATTCATATGAAAA+AGG - Chr3:75950308-75950327 None:intergenic 20.0%
!! ATACATTCAAATAAATGAAG+CGG + Chr3:75952658-75952677 MsG0380015858.01.T01:intron 20.0%
!! ATCGTAGGAATTAAAAATTA+AGG + Chr3:75952219-75952238 MsG0380015858.01.T01:intron 20.0%
!! CGAATTAAATATTGTTTCAT+TGG + Chr3:75953078-75953097 MsG0380015858.01.T01:intron 20.0%
!! GAAAAAAAAAATTGACAAGT+GGG - Chr3:75950999-75951018 None:intergenic 20.0%
!! GAAAACGAATGAAATAATTT+AGG + Chr3:75952051-75952070 MsG0380015858.01.T01:intron 20.0%
!! GAAAAGTTGAATTTAAATCT+TGG + Chr3:75953143-75953162 MsG0380015858.01.T01:CDS 20.0%
!! TCTATAAATGAAATGAAAGA+AGG - Chr3:75948704-75948723 None:intergenic 20.0%
!! TGAAAAAAAAAATTGACAAG+TGG - Chr3:75951000-75951019 None:intergenic 20.0%
!! TGAAATAATGAATCAATCTA+TGG - Chr3:75953463-75953482 None:intergenic 20.0%
!! TGTTCAATTAGTTGTTATAT+TGG + Chr3:75952504-75952523 MsG0380015858.01.T01:intron 20.0%
!! TTAAATATGTCATAATCCAT+TGG - Chr3:75954017-75954036 None:intergenic 20.0%
!! TTAAATATTGTTTCATTGGT+TGG + Chr3:75953082-75953101 MsG0380015858.01.T01:intron 20.0%
!! TTCATCATTATCACATTTAA+AGG - Chr3:75952733-75952752 None:intergenic 20.0%
!!! ATATCATAGTTTTTTTTTGG+TGG + Chr3:75952326-75952345 MsG0380015858.01.T01:intron 20.0%
!!! CAATTGATTCCTTTTTTATT+TGG - Chr3:75951968-75951987 None:intergenic 20.0%
!!! CATTTAGATTTAGAATATCT+TGG - Chr3:75953345-75953364 None:intergenic 20.0%
!!! CTATTTTGCATATCATTATT+AGG + Chr3:75951835-75951854 MsG0380015858.01.T01:intron 20.0%
!!! TATTACTCATTTTTACAAGT+GGG + Chr3:75950660-75950679 MsG0380015858.01.T01:intron 20.0%
!!! TTAAATGTGATAATGATGAA+CGG + Chr3:75952733-75952752 MsG0380015858.01.T01:intron 20.0%
! AAAAAAAAATTGACAAGTGG+GGG - Chr3:75950997-75951016 None:intergenic 25.0%
! AAAATGCAAACCAGTTAAAT+GGG + Chr3:75954117-75954136 MsG0380015858.01.T01:CDS 25.0%
! AAGACAATAGAAATATGAAC+TGG + Chr3:75951034-75951053 MsG0380015858.01.T01:intron 25.0%
! AATCAATTGTCGACATAATA+AGG + Chr3:75951979-75951998 MsG0380015858.01.T01:intron 25.0%
! AATTAGTTGTTATATTGGAG+GGG + Chr3:75952509-75952528 MsG0380015858.01.T01:intron 25.0%
! AATTGAGATGAGCATATATT+TGG - Chr3:75951885-75951904 None:intergenic 25.0%
! AATTTGATTGATCCTAAGTA+AGG - Chr3:75953948-75953967 None:intergenic 25.0%
! AGTGTAAAAGTTTCTTTACA+AGG - Chr3:75949881-75949900 None:intergenic 25.0%
! AGTTGAATTTAAATCTTGGT+TGG + Chr3:75953147-75953166 MsG0380015858.01.T01:CDS 25.0%
! ATGTATATATAGGAACTAAG+TGG - Chr3:75948676-75948695 None:intergenic 25.0%
! ATTATTAGGTATTAGGTGAA+TGG - Chr3:75950437-75950456 None:intergenic 25.0%
! CAATTAGTTGTTATATTGGA+GGG + Chr3:75952508-75952527 MsG0380015858.01.T01:intron 25.0%
! CTCAATACACAAAACAAAAT+CGG + Chr3:75953870-75953889 MsG0380015858.01.T01:CDS 25.0%
! CTGAAACAAACAGAAATTAT+GGG - Chr3:75953500-75953519 None:intergenic 25.0%
! CTTAGGAATTATTAGGTATT+AGG - Chr3:75950444-75950463 None:intergenic 25.0%
! GAAGGATTGTATGTATATAT+AGG - Chr3:75948686-75948705 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG - Chr3:75952370-75952389 None:intergenic 25.0%
! GAGATTAATAGTCTAATTCA+TGG + Chr3:75952029-75952048 MsG0380015858.01.T01:intron 25.0%
! GTAAGAAAAACTTCACTAAT+AGG + Chr3:75952100-75952119 MsG0380015858.01.T01:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG - Chr3:75950687-75950706 None:intergenic 25.0%
! TACTATTCCATTATCTTTCT+TGG - Chr3:75951312-75951331 None:intergenic 25.0%
! TATTACTTCTTTATGCAAGT+GGG + Chr3:75950701-75950720 MsG0380015858.01.T01:intron 25.0%
! TCAATTAGTTGTTATATTGG+AGG + Chr3:75952507-75952526 MsG0380015858.01.T01:intron 25.0%
! TGAAACAAACAGAAATTATG+GGG - Chr3:75953499-75953518 None:intergenic 25.0%
! TGAAATAATTTAGGAACAGT+AGG + Chr3:75952060-75952079 MsG0380015858.01.T01:intron 25.0%
! TGAATTAGACTATTAATCTC+CGG - Chr3:75952029-75952048 None:intergenic 25.0%
! TGCATAATATATACAAGGTT+CGG - Chr3:75952365-75952384 None:intergenic 25.0%
! TGTTGTTAAAATAATGACCA+CGG + Chr3:75948599-75948618 MsG0380015858.01.T01:five_prime_UTR 25.0%
! TTATTACTTCTTTATGCAAG+TGG + Chr3:75950700-75950719 MsG0380015858.01.T01:intron 25.0%
! TTATTAGGTATTAGGTGAAT+GGG - Chr3:75950436-75950455 None:intergenic 25.0%
! TTTGTAGTTAAGGATTGTTA+GGG - Chr3:75953700-75953719 None:intergenic 25.0%
!! CTTTCAAGAATTTTATTGTC+TGG - Chr3:75950345-75950364 None:intergenic 25.0%
!! TAACTTCAGCTTTAATAGTT+GGG - Chr3:75948940-75948959 None:intergenic 25.0%
!! TCGTTGGAATTTTTCTATAA+TGG + Chr3:75950952-75950971 MsG0380015858.01.T01:intron 25.0%
!! TCTGAAACAAACAGAAATTA+TGG - Chr3:75953501-75953520 None:intergenic 25.0%
!! TCTTTTGGTAAATGTACAAT+TGG + Chr3:75951343-75951362 MsG0380015858.01.T01:intron 25.0%
!! TTAACTTCAGCTTTAATAGT+TGG - Chr3:75948941-75948960 None:intergenic 25.0%
!! TTTTGTAGTTAAGGATTGTT+AGG - Chr3:75953701-75953720 None:intergenic 25.0%
!!! AAAGCCAGTAGTTTTTTTTA+GGG - Chr3:75953639-75953658 None:intergenic 25.0%
!!! AGTTTTAAAGTTGTCATGAT+CGG + Chr3:75949998-75950017 MsG0380015858.01.T01:intron 25.0%
!!! CTATTACTCATTTTTACAAG+TGG + Chr3:75950659-75950678 MsG0380015858.01.T01:intron 25.0%
!!! TATTTCTATCATGGACATTT+TGG + Chr3:75949499-75949518 MsG0380015858.01.T01:CDS 25.0%
!!! TCACAAATAAAGAGTATCAT+TGG - Chr3:75950258-75950277 None:intergenic 25.0%
!!! TCTTTTCCTTATTTTATACG+AGG - Chr3:75952861-75952880 None:intergenic 25.0%
!!! TGATTCCTTTTTTATTTGGT+GGG - Chr3:75951964-75951983 None:intergenic 25.0%
!!! TTACTTTTAAGAGGAAATTC+CGG + Chr3:75952007-75952026 MsG0380015858.01.T01:intron 25.0%
!!! TTGATTCCTTTTTTATTTGG+TGG - Chr3:75951965-75951984 None:intergenic 25.0%
AAATCGGTAGTTTCACTAAA+TGG + Chr3:75953886-75953905 MsG0380015858.01.T01:CDS 30.0%
AACAAAAGAAAAACCATTGC+TGG - Chr3:75949364-75949383 None:intergenic 30.0%
AACTCACCATCATAATGAAA+TGG - Chr3:75949589-75949608 None:intergenic 30.0%
AAGACCCTAAAAAAAACTAC+TGG + Chr3:75953632-75953651 MsG0380015858.01.T01:intron 30.0%
AATACAGATTCAAAGTTGAC+AGG + Chr3:75949215-75949234 MsG0380015858.01.T01:CDS 30.0%
AATCGGTAGTTTCACTAAAT+GGG + Chr3:75953887-75953906 MsG0380015858.01.T01:CDS 30.0%
AATCTAAATGCATGATGCTT+TGG + Chr3:75953355-75953374 MsG0380015858.01.T01:intron 30.0%
AATCTGACTATCCAATTATG+GGG + Chr3:75953188-75953207 MsG0380015858.01.T01:CDS 30.0%
AATTAATCAACATGTAGCAG+TGG - Chr3:75949302-75949321 None:intergenic 30.0%
AATTGTCGACATAATAAGGA+AGG + Chr3:75951983-75952002 MsG0380015858.01.T01:intron 30.0%
ACAATCTGACTATCCAATTA+TGG + Chr3:75953186-75953205 MsG0380015858.01.T01:CDS 30.0%
ACATCTCCTATACTAACATT+TGG - Chr3:75952487-75952506 None:intergenic 30.0%
ACTGCAGTTATATTTCCATA+TGG + Chr3:75954269-75954288 MsG0380015858.01.T01:CDS 30.0%
ATACAGATTCAAAGTTGACA+GGG + Chr3:75949216-75949235 MsG0380015858.01.T01:CDS 30.0%
ATAGACACACACAAACTAAT+TGG - Chr3:75951819-75951838 None:intergenic 30.0%
ATCTAAATGCATGATGCTTT+GGG + Chr3:75953356-75953375 MsG0380015858.01.T01:intron 30.0%
ATTAGTTGTTATATTGGAGG+GGG + Chr3:75952510-75952529 MsG0380015858.01.T01:intron 30.0%
ATTGAACCACATTTGCATAT+GGG + Chr3:75954350-75954369 MsG0380015858.01.T01:CDS 30.0%
CAAAAAAGACCTACAGAATA+AGG + Chr3:75951637-75951656 MsG0380015858.01.T01:intron 30.0%
CAAAATGCAAACCAGTTAAA+TGG + Chr3:75954116-75954135 MsG0380015858.01.T01:CDS 30.0%
CAACGATGATTTGATGAAAT+GGG - Chr3:75950938-75950957 None:intergenic 30.0%
CAATCTGACTATCCAATTAT+GGG + Chr3:75953187-75953206 MsG0380015858.01.T01:CDS 30.0%
CAGTTATATTTCCATATGGT+TGG + Chr3:75954273-75954292 MsG0380015858.01.T01:CDS 30.0%
CATCTCAATTATCACCATTT+AGG + Chr3:75951895-75951914 MsG0380015858.01.T01:intron 30.0%
CATGCATGTATGATAAAATG+GGG - Chr3:75953006-75953025 None:intergenic 30.0%
CTACAACAATGCAATTTGAA+AGG + Chr3:75951577-75951596 MsG0380015858.01.T01:intron 30.0%
CTGTAAAAATGTTTGCAGTT+TGG + Chr3:75949127-75949146 MsG0380015858.01.T01:intron 30.0%
CTTTCAAATTGCATTGTTGT+AGG - Chr3:75951579-75951598 None:intergenic 30.0%
GCATAATATATACAAGGTTC+GGG - Chr3:75952364-75952383 None:intergenic 30.0%
GCATGCATGTATGATAAAAT+GGG - Chr3:75953007-75953026 None:intergenic 30.0%
GCCAAATTTATGTCTATAGA+GGG + Chr3:75952954-75952973 MsG0380015858.01.T01:intron 30.0%
GTAGTTGTATTTGGATTAAC+TGG - Chr3:75954044-75954063 None:intergenic 30.0%
GTTAATCCAAATACAACTAC+CGG + Chr3:75954044-75954063 MsG0380015858.01.T01:CDS 30.0%
GTTGTTAAAATAATGACCAC+GGG + Chr3:75948600-75948619 MsG0380015858.01.T01:five_prime_UTR 30.0%
TATATATAGGAACTAAGTGG+AGG - Chr3:75948673-75948692 None:intergenic 30.0%
TCAGAATCACAAACTTATTG+TGG + Chr3:75953516-75953535 MsG0380015858.01.T01:intron 30.0%
TCCCTCTATAGACATAAATT+TGG - Chr3:75952958-75952977 None:intergenic 30.0%
TGCAATTCAAGGAATGATAT+GGG - Chr3:75953440-75953459 None:intergenic 30.0%
TGCATGCATGTATGATAAAA+TGG - Chr3:75953008-75953027 None:intergenic 30.0%
TGCCAAATTTATGTCTATAG+AGG + Chr3:75952953-75952972 MsG0380015858.01.T01:intron 30.0%
TTATAACTAGACTGGTACTT+TGG - Chr3:75949074-75949093 None:intergenic 30.0%
TTGTTAAAATAATGACCACG+GGG + Chr3:75948601-75948620 MsG0380015858.01.T01:five_prime_UTR 30.0%
TTGTTCCCACCAAATAAAAA+AGG + Chr3:75951956-75951975 MsG0380015858.01.T01:intron 30.0%
! AAAAGTTGAAAGTATACCTG+TGG - Chr3:75949700-75949719 None:intergenic 30.0%
! AATTGTCGCATCAATTGTTT+TGG + Chr3:75952568-75952587 MsG0380015858.01.T01:intron 30.0%
! ATTTGCATGGACATGATTTT+TGG + Chr3:75954165-75954184 MsG0380015858.01.T01:CDS 30.0%
! TTTGCATGGACATGATTTTT+GGG + Chr3:75954166-75954185 MsG0380015858.01.T01:CDS 30.0%
!! AAAAACTACTGGCTTTCAAT+TGG + Chr3:75953643-75953662 MsG0380015858.01.T01:intron 30.0%
!! AAGGAAGGTTTACTTTTAAG+AGG + Chr3:75951998-75952017 MsG0380015858.01.T01:intron 30.0%
!! AGGTAAATTCTTAGTTCTAG+TGG + Chr3:75949035-75949054 MsG0380015858.01.T01:intron 30.0%
!! CAGAGATTGTTTTGTAGTTA+AGG - Chr3:75953710-75953729 None:intergenic 30.0%
!! TAACTGGTTGGTGTTAAATA+TGG + Chr3:75949462-75949481 MsG0380015858.01.T01:intron 30.0%
!! TCTAATAGTGGATTTACCAA+AGG + Chr3:75949552-75949571 MsG0380015858.01.T01:CDS 30.0%
!!! AGCTTTATTTTGACGCAAAA+AGG + Chr3:75951378-75951397 MsG0380015858.01.T01:intron 30.0%
!!! AGTAGTTTTTTTTAGGGTCT+TGG - Chr3:75953633-75953652 None:intergenic 30.0%
!!! CGATTTTGTTTTGTGTATTG+AGG - Chr3:75953872-75953891 None:intergenic 30.0%
!!! CTTATTCTGTAGGTCTTTTT+TGG - Chr3:75951639-75951658 None:intergenic 30.0%
!!! GAAAGCCAGTAGTTTTTTTT+AGG - Chr3:75953640-75953659 None:intergenic 30.0%
!!! GCAATTCTGATTGTTTTGAT+TGG + Chr3:75952613-75952632 MsG0380015858.01.T01:intron 30.0%
!!! GCTTTATTTTGACGCAAAAA+GGG + Chr3:75951379-75951398 MsG0380015858.01.T01:intron 30.0%
!!! TTTTGTTTTGTGTATTGAGG+AGG - Chr3:75953869-75953888 None:intergenic 30.0%
!!! TTTTTTATTTGGTGGGAACA+AGG - Chr3:75951957-75951976 None:intergenic 30.0%
AAACCACTTGAAAAAGACGA+AGG + Chr3:75952820-75952839 MsG0380015858.01.T01:intron 35.0%
AAAGAACGGGCAACTATATA+AGG - Chr3:75950795-75950814 None:intergenic 35.0%
AAATAAGTGATGTGTCACGT+GGG - Chr3:75950512-75950531 None:intergenic 35.0%
AATGTGGTTCAATGTGACAA+TGG - Chr3:75954343-75954362 None:intergenic 35.0%
ACAATGGTAGTTTCCTAACA+AGG + Chr3:75950471-75950490 MsG0380015858.01.T01:intron 35.0%
ACTAGCAATCCTTATTCTGT+AGG - Chr3:75951649-75951668 None:intergenic 35.0%
ACTTCACTAATAGGTCAAAG+AGG + Chr3:75952109-75952128 MsG0380015858.01.T01:intron 35.0%
AGAGAGCCATTTCATTATGA+TGG + Chr3:75949580-75949599 MsG0380015858.01.T01:CDS 35.0%
AGATTTGAATCACATGAGTG+GGG + Chr3:75952756-75952775 MsG0380015858.01.T01:intron 35.0%
ATACAAAAAGCCAGATTGTG+TGG + Chr3:75948877-75948896 MsG0380015858.01.T01:CDS 35.0%
CAAATTGCATTGTTGTAGGT+TGG - Chr3:75951575-75951594 None:intergenic 35.0%
CAACAATGCAATTTGAAAGG+TGG + Chr3:75951580-75951599 MsG0380015858.01.T01:intron 35.0%
CATGTTGATCTAACAAACCA+TGG - Chr3:75953243-75953262 None:intergenic 35.0%
CATTGAACCACATTTGCATA+TGG + Chr3:75954349-75954368 MsG0380015858.01.T01:CDS 35.0%
CCAACGATGATTTGATGAAA+TGG - Chr3:75950939-75950958 None:intergenic 35.0%
CCAATGACAATACACTAACA+AGG + Chr3:75950573-75950592 MsG0380015858.01.T01:intron 35.0%
CCATGATAGAAATATGTACC+AGG - Chr3:75949493-75949512 None:intergenic 35.0%
CCATTTCATCAAATCATCGT+TGG + Chr3:75950936-75950955 MsG0380015858.01.T01:intron 35.0%
CCTTGTTAGTGTATTGTCAT+TGG - Chr3:75950576-75950595 None:intergenic 35.0%
CTACGATTCTGCACATTAAA+CGG - Chr3:75952206-75952225 None:intergenic 35.0%
CTATTTAAGGAGTCCTTGTT+AGG - Chr3:75950487-75950506 None:intergenic 35.0%
CTGTATTGAAAAGTTTCTCC+TGG - Chr3:75949202-75949221 None:intergenic 35.0%
GAAATGCAATAATCAGCAGT+AGG - Chr3:75953417-75953436 None:intergenic 35.0%
GAATAACAGTTCCTTCTGTA+TGG - Chr3:75948997-75949016 None:intergenic 35.0%
GAATCACAAACTTATTGTGG+TGG + Chr3:75953519-75953538 MsG0380015858.01.T01:intron 35.0%
GACAGTACCAAGAAAGATAA+TGG + Chr3:75951302-75951321 MsG0380015858.01.T01:intron 35.0%
GAGATTTGAATCACATGAGT+GGG + Chr3:75952755-75952774 MsG0380015858.01.T01:intron 35.0%
GATGAGCATATATTTGGATG+TGG - Chr3:75951879-75951898 None:intergenic 35.0%
GCAATTCAAGGAATGATATG+GGG - Chr3:75953439-75953458 None:intergenic 35.0%
GGATGCTCTTAGGAATTATT+AGG - Chr3:75950451-75950470 None:intergenic 35.0%
GTGCAATTCAAGGAATGATA+TGG - Chr3:75953441-75953460 None:intergenic 35.0%
TAAATAAGTGATGTGTCACG+TGG - Chr3:75950513-75950532 None:intergenic 35.0%
TAACTGAGATGCATAGTGAT+TGG + Chr3:75952890-75952909 MsG0380015858.01.T01:intron 35.0%
TAATCCATTGGAAATCTCTC+TGG - Chr3:75954005-75954024 None:intergenic 35.0%
TAGGAGAAAACTCACTGAAA+TGG - Chr3:75951700-75951719 None:intergenic 35.0%
TATAGTTGCCCGTTCTTTAA+CGG + Chr3:75950797-75950816 MsG0380015858.01.T01:intron 35.0%
TCAATCTATGGTGCAATTCA+AGG - Chr3:75953451-75953470 None:intergenic 35.0%
TGGAGTCCTCGTATAAAATA+AGG + Chr3:75952852-75952871 MsG0380015858.01.T01:intron 35.0%
TTACACGTTTCAGTTGAATG+AGG + Chr3:75954076-75954095 MsG0380015858.01.T01:CDS 35.0%
TTATGAGACAGCTACCTAAA+TGG - Chr3:75951912-75951931 None:intergenic 35.0%
TTGGACTGCATTAAGGTTTA+AGG + Chr3:75954292-75954311 MsG0380015858.01.T01:CDS 35.0%
TTGTTAGGAAACTACCATTG+TGG - Chr3:75950472-75950491 None:intergenic 35.0%
! AAACTTTTCTCATCAACACC+TGG - Chr3:75954221-75954240 None:intergenic 35.0%
! AATTTTTCTTCCTCCAATGG+AGG + Chr3:75950826-75950845 MsG0380015858.01.T01:intron 35.0%
! ACTATTAGAGCATCTCCAAT+GGG - Chr3:75950888-75950907 None:intergenic 35.0%
! ATGGTAGTGAAATTCATCCA+TGG + Chr3:75954141-75954160 MsG0380015858.01.T01:CDS 35.0%
! ATTTTTCTTCCTCCAATGGA+GGG + Chr3:75950827-75950846 MsG0380015858.01.T01:intron 35.0%
! CCTGGTACATATTTCTATCA+TGG + Chr3:75949490-75949509 MsG0380015858.01.T01:CDS 35.0%
! CTCAATTTTTCTTCCTCCAA+TGG + Chr3:75950823-75950842 MsG0380015858.01.T01:intron 35.0%
! TGCTGAAAGCAGTTTTTGTT+TGG + Chr3:75948783-75948802 MsG0380015858.01.T01:CDS 35.0%
! TGGTAATGTTGGAAAAACTG+AGG - Chr3:75953733-75953752 None:intergenic 35.0%
!! GCTCAGAGATTTAGTCTTTT+GGG - Chr3:75948737-75948756 None:intergenic 35.0%
!! TGCTCAGAGATTTAGTCTTT+TGG - Chr3:75948738-75948757 None:intergenic 35.0%
!! TTGTTTGGTGCATATGGTTA+GGG + Chr3:75948798-75948817 MsG0380015858.01.T01:CDS 35.0%
!! TTTGTTTGGTGCATATGGTT+AGG + Chr3:75948797-75948816 MsG0380015858.01.T01:CDS 35.0%
!!! AATGGGTGTTATTTTTGCTG+AGG + Chr3:75954373-75954392 MsG0380015858.01.T01:CDS 35.0%
!!! ATAGTTTTTTTTTGGTGGCC+AGG + Chr3:75952331-75952350 MsG0380015858.01.T01:intron 35.0%
!!! CAGTTTTTGTTTGGTGCATA+TGG + Chr3:75948792-75948811 MsG0380015858.01.T01:CDS 35.0%
!!! GATTTTTGGGTTTTGGGATA+TGG + Chr3:75954179-75954198 MsG0380015858.01.T01:CDS 35.0%
!!! GGACATGATTTTTGGGTTTT+GGG + Chr3:75954173-75954192 MsG0380015858.01.T01:CDS 35.0%
!!! TAGTTTTTTTTTGGTGGCCA+GGG + Chr3:75952332-75952351 MsG0380015858.01.T01:intron 35.0%
!!! TGGACATGATTTTTGGGTTT+TGG + Chr3:75954172-75954191 MsG0380015858.01.T01:CDS 35.0%
!!! TTCGTCTTTTTCAAGTGGTT+TGG - Chr3:75952821-75952840 None:intergenic 35.0%
!!! TTTTAGAGCTTGCTCATCAA+TGG + Chr3:75951505-75951524 MsG0380015858.01.T01:intron 35.0%
AAAAAATTGACAAGTGGGGG+TGG - Chr3:75950994-75951013 None:intergenic 40.0%
AAAATAAAGCTAACACCGCG+TGG - Chr3:75951369-75951388 None:intergenic 40.0%
AAACGTGTAAACACCGTTAC+CGG - Chr3:75954066-75954085 None:intergenic 40.0%
AAGAAAAACCATTGCTGGCA+TGG - Chr3:75949359-75949378 None:intergenic 40.0%
AAGCACTAATGCTCATATGG+TGG - Chr3:75950284-75950303 None:intergenic 40.0%
AATAAGTGATGTGTCACGTG+GGG - Chr3:75950511-75950530 None:intergenic 40.0%
AATGGCTCTCTTTGTTCCTT+TGG - Chr3:75949571-75949590 None:intergenic 40.0%
AATGGGGTCCTTACTTAACA+AGG - Chr3:75950871-75950890 None:intergenic 40.0%
ACCACATTTGCATATGGGAA+TGG + Chr3:75954355-75954374 MsG0380015858.01.T01:CDS 40.0%
AGCAGTGGAAACAGAAAAAG+AGG - Chr3:75949287-75949306 None:intergenic 40.0%
ATAACTGCAGTGTTCCTCAA+AGG - Chr3:75954260-75954279 None:intergenic 40.0%
ATAGTTGCCCGTTCTTTAAC+GGG + Chr3:75950798-75950817 MsG0380015858.01.T01:intron 40.0%
ATATATGTCCATGCCAGCAA+TGG + Chr3:75949348-75949367 MsG0380015858.01.T01:intron 40.0%
ATTCATCCATGGCATTTGCA+TGG + Chr3:75954152-75954171 MsG0380015858.01.T01:CDS 40.0%
ATTGAGTCCCCGTTAAAGAA+CGG - Chr3:75950809-75950828 None:intergenic 40.0%
CACTAATAGGTCAAAGAGGT+TGG + Chr3:75952113-75952132 MsG0380015858.01.T01:intron 40.0%
CACTACCATTCCCATTTAAC+TGG - Chr3:75954130-75954149 None:intergenic 40.0%
CAGAAGGAACTGTTATTCAC+TGG + Chr3:75948999-75949018 MsG0380015858.01.T01:CDS 40.0%
CATATGGTTGGACTGCATTA+AGG + Chr3:75954285-75954304 MsG0380015858.01.T01:CDS 40.0%
CATTGGAGATGCTCTAATAG+TGG + Chr3:75950887-75950906 MsG0380015858.01.T01:intron 40.0%
CCAAATACAACTACCGGTAA+CGG + Chr3:75954050-75954069 MsG0380015858.01.T01:CDS 40.0%
CCACACTTAAGAGCTTCTTT+AGG - Chr3:75954422-75954441 None:intergenic 40.0%
CCACATTTGCATATGGGAAT+GGG + Chr3:75954356-75954375 MsG0380015858.01.T01:CDS 40.0%
CCTAAAGAAGCTCTTAAGTG+TGG + Chr3:75954419-75954438 MsG0380015858.01.T01:CDS 40.0%
CGTTTAATGTGCAGAATCGT+AGG + Chr3:75952204-75952223 MsG0380015858.01.T01:intron 40.0%
CTGAGGCTGTTCATAAAGTT+AGG + Chr3:75954390-75954409 MsG0380015858.01.T01:CDS 40.0%
CTTAATGCAGTCCAACCATA+TGG - Chr3:75954287-75954306 None:intergenic 40.0%
GAAAACAACTCACACTCATG+TGG + Chr3:75950364-75950383 MsG0380015858.01.T01:intron 40.0%
GATTGATCCTAAGTAAGGTG+TGG - Chr3:75953943-75953962 None:intergenic 40.0%
GCAAACCAGTTAAATGGGAA+TGG + Chr3:75954122-75954141 MsG0380015858.01.T01:CDS 40.0%
GCATAGAAAACCTTGCAACT+AGG + Chr3:75950909-75950928 MsG0380015858.01.T01:intron 40.0%
GCTGTATGGTTCTCTAATAG+TGG + Chr3:75949540-75949559 MsG0380015858.01.T01:CDS 40.0%
GGAGATTTGAATCACATGAG+TGG + Chr3:75952754-75952773 MsG0380015858.01.T01:intron 40.0%
GGAGTCATTGAGTCCTTAAT+AGG - Chr3:75950555-75950574 None:intergenic 40.0%
GTTCACCAATCCATCTCATT+GGG - Chr3:75949678-75949697 None:intergenic 40.0%
GTTCCCTAGCAGCTAAATAT+GGG + Chr3:75951545-75951564 MsG0380015858.01.T01:intron 40.0%
TAAATGTACAATTGGCCACG+CGG + Chr3:75951351-75951370 MsG0380015858.01.T01:intron 40.0%
TAGAAAACCTTGCAACTAGG+TGG + Chr3:75950912-75950931 MsG0380015858.01.T01:intron 40.0%
TATGGGGACCAAATTGGATT+GGG + Chr3:75953204-75953223 MsG0380015858.01.T01:CDS 40.0%
TCCAATTATGGGGACCAAAT+TGG + Chr3:75953198-75953217 MsG0380015858.01.T01:CDS 40.0%
TCCAATTTGGTCCCCATAAT+TGG - Chr3:75953202-75953221 None:intergenic 40.0%
TCTCAGTGTGCTATAAATCC+AGG + Chr3:75949181-75949200 MsG0380015858.01.T01:CDS 40.0%
TGAGATGCATAGTGATTGGT+CGG + Chr3:75952894-75952913 MsG0380015858.01.T01:intron 40.0%
TGTTCCCTAGCAGCTAAATA+TGG + Chr3:75951544-75951563 MsG0380015858.01.T01:intron 40.0%
TGTTCGGTATCGTTCCATAA+GGG - Chr3:75953768-75953787 None:intergenic 40.0%
TTATGGGGACCAAATTGGAT+TGG + Chr3:75953203-75953222 MsG0380015858.01.T01:CDS 40.0%
TTCACCAATCCATCTCATTG+GGG - Chr3:75949677-75949696 None:intergenic 40.0%
TTGTACCGTTAACATTGCCT+AGG - Chr3:75948637-75948656 None:intergenic 40.0%
TTGTTAAGTAAGGACCCCAT+TGG + Chr3:75950870-75950889 MsG0380015858.01.T01:intron 40.0%
! ATCACATTTTTGACCCCAAG+TGG + Chr3:75949324-75949343 MsG0380015858.01.T01:intron 40.0%
! ATGGACATATATGCCACTTG+GGG - Chr3:75949340-75949359 None:intergenic 40.0%
! ATTTGAAACGTGCACCTTTG+AGG + Chr3:75954243-75954262 MsG0380015858.01.T01:CDS 40.0%
! CACTATTAGAGCATCTCCAA+TGG - Chr3:75950889-75950908 None:intergenic 40.0%
! CATGGACATATATGCCACTT+GGG - Chr3:75949341-75949360 None:intergenic 40.0%
! CATGTTGTGATGGGAATCAA+TGG + Chr3:75948902-75948921 MsG0380015858.01.T01:CDS 40.0%
! CTATTAGAGCATCTCCAATG+GGG - Chr3:75950887-75950906 None:intergenic 40.0%
! TGTGAATGCTTTGCTGTGTT+CGG - Chr3:75953784-75953803 None:intergenic 40.0%
! TTTGCAGTTTGGAACTCCTT+GGG + Chr3:75949138-75949157 MsG0380015858.01.T01:intron 40.0%
!! ATATGTAGTGGGTCATAGCT+AGG - Chr3:75951719-75951738 None:intergenic 40.0%
!! ATTCCTAAGAGCATCCACAA+TGG + Chr3:75950455-75950474 MsG0380015858.01.T01:intron 40.0%
!! GGAAAGCACTAATGCTCATA+TGG - Chr3:75950287-75950306 None:intergenic 40.0%
!! TGGCTTTCAATTGGTGTTAG+AGG + Chr3:75953652-75953671 MsG0380015858.01.T01:intron 40.0%
!! TGTTGTAAGGAGTACTGAGT+AGG - Chr3:75953608-75953627 None:intergenic 40.0%
AAAGACGAAGGACCACGTTA+TGG + Chr3:75952832-75952851 MsG0380015858.01.T01:intron 45.0%
AATGGAATGCCCAAACACCA+GGG - Chr3:75954325-75954344 None:intergenic 45.0%
ACAACATGCTCCACACAATC+TGG - Chr3:75948890-75948909 None:intergenic 45.0%
ACCAACAAGCTCCATACAGA+AGG + Chr3:75948983-75949002 MsG0380015858.01.T01:CDS 45.0%
ACCACCAGAGAGATTTCCAA+TGG + Chr3:75953998-75954017 MsG0380015858.01.T01:CDS 45.0%
AGCTCACATGAACAAGAGGT+TGG + Chr3:75949640-75949659 MsG0380015858.01.T01:CDS 45.0%
ATCTGCTCCTTAGTGATCTG+TGG + Chr3:75949611-75949630 MsG0380015858.01.T01:CDS 45.0%
ATTGGAAATCTCTCTGGTGG+TGG - Chr3:75953999-75954018 None:intergenic 45.0%
CACAAGCTCACATGAACAAG+AGG + Chr3:75949636-75949655 MsG0380015858.01.T01:CDS 45.0%
CATTAAACGGCTACTTGAGC+TGG - Chr3:75952193-75952212 None:intergenic 45.0%
CCCATTCCCATATGCAAATG+TGG - Chr3:75954359-75954378 None:intergenic 45.0%
CCGTTACCGGTAGTTGTATT+TGG - Chr3:75954053-75954072 None:intergenic 45.0%
CGATGTCATCAACTGCGAAT+GGG - Chr3:75953567-75953586 None:intergenic 45.0%
CTACCATTGTGGATGCTCTT+AGG - Chr3:75950461-75950480 None:intergenic 45.0%
GACAGCCTAGGCAATGTTAA+CGG + Chr3:75948629-75948648 MsG0380015858.01.T01:five_prime_UTR 45.0%
GATCCTAAGTAAGGTGTGGT+TGG - Chr3:75953939-75953958 None:intergenic 45.0%
GATGACATCGACATCTACTC+AGG + Chr3:75953577-75953596 MsG0380015858.01.T01:CDS 45.0%
GATTGCTAGTACTACGTCCT+TGG + Chr3:75951659-75951678 MsG0380015858.01.T01:intron 45.0%
GCATGGACATATATGCCACT+TGG - Chr3:75949342-75949361 None:intergenic 45.0%
GCTCCCATATTTAGCTGCTA+GGG - Chr3:75951551-75951570 None:intergenic 45.0%
GGAACTGTTATTCACTGGCA+TGG + Chr3:75949004-75949023 MsG0380015858.01.T01:CDS 45.0%
GGAGTGGTCCTTGTTAAGTA+AGG + Chr3:75950860-75950879 MsG0380015858.01.T01:intron 45.0%
GGTTCACCAATCCATCTCAT+TGG - Chr3:75949679-75949698 None:intergenic 45.0%
GTGTTAAATATGGTGCAGCC+TGG + Chr3:75949472-75949491 MsG0380015858.01.T01:intron 45.0%
GTGTTCGGTATCGTTCCATA+AGG - Chr3:75953769-75953788 None:intergenic 45.0%
TAATAGTTGGGCCTGGAAAC+TGG - Chr3:75948928-75948947 None:intergenic 45.0%
TAGAGGGAATCACATCTTGC+AGG + Chr3:75952970-75952989 MsG0380015858.01.T01:intron 45.0%
TAGGGTCTTGGTCTGTTGTA+AGG - Chr3:75953621-75953640 None:intergenic 45.0%
TAGTTGCCCGTTCTTTAACG+GGG + Chr3:75950799-75950818 MsG0380015858.01.T01:intron 45.0%
TATACGAGGACTCCATAACG+TGG - Chr3:75952847-75952866 None:intergenic 45.0%
TATTGAGGAGGAGAATCGTG+CGG - Chr3:75953857-75953876 None:intergenic 45.0%
TCATGTCCATGCAAATGCCA+TGG - Chr3:75954161-75954180 None:intergenic 45.0%
TCCATTGGAAATCTCTCTGG+TGG - Chr3:75954002-75954021 None:intergenic 45.0%
TCCTTCTGTATGGAGCTTGT+TGG - Chr3:75948987-75949006 None:intergenic 45.0%
TCGATGTCATCAACTGCGAA+TGG - Chr3:75953568-75953587 None:intergenic 45.0%
TCTCTCTCCTGGGTAACTAA+CGG - Chr3:75950768-75950787 None:intergenic 45.0%
TGAGCACACCCAATCCAATT+TGG - Chr3:75953215-75953234 None:intergenic 45.0%
TGCTCCCATATTTAGCTGCT+AGG - Chr3:75951552-75951571 None:intergenic 45.0%
TGGCTCCACATGAAGAATCT+GGG - Chr3:75951619-75951638 None:intergenic 45.0%
TGTCACGTGGGGTCTATTTA+AGG - Chr3:75950500-75950519 None:intergenic 45.0%
TGTGTGGAGCATGTTGTGAT+GGG + Chr3:75948893-75948912 MsG0380015858.01.T01:CDS 45.0%
TTAGTTACCCAGGAGAGAGA+GGG + Chr3:75950768-75950787 MsG0380015858.01.T01:intron 45.0%
TTGAGTCCCCGTTAAAGAAC+GGG - Chr3:75950808-75950827 None:intergenic 45.0%
TTGCCAACCACACCTTACTT+AGG + Chr3:75953933-75953952 MsG0380015858.01.T01:CDS 45.0%
TTGGCTCCACATGAAGAATC+TGG - Chr3:75951620-75951639 None:intergenic 45.0%
TTGGTATGCAAAGAGCAGCA+GGG + Chr3:75949518-75949537 MsG0380015858.01.T01:CDS 45.0%
TTGTGTGCCACAGATCACTA+AGG - Chr3:75949621-75949640 None:intergenic 45.0%
TTGTGTGGAGCATGTTGTGA+TGG + Chr3:75948892-75948911 MsG0380015858.01.T01:CDS 45.0%
TTTGGTATGCAAAGAGCAGC+AGG + Chr3:75949517-75949536 MsG0380015858.01.T01:CDS 45.0%
! AGGTTTAAGGCAGATAACCC+TGG + Chr3:75954305-75954324 MsG0380015858.01.T01:CDS 45.0%
! CTTATTGTGGTGGAAGCAGA+TGG + Chr3:75953529-75953548 MsG0380015858.01.T01:CDS 45.0%
! GTTGGTGAGGTCAATGACAA+GGG - Chr3:75948969-75948988 None:intergenic 45.0%
! GTTTGCAGTTTGGAACTCCT+TGG + Chr3:75949137-75949156 MsG0380015858.01.T01:intron 45.0%
! TCAGCTTTAATAGTTGGGCC+TGG - Chr3:75948935-75948954 None:intergenic 45.0%
! TGTTGGTGAGGTCAATGACA+AGG - Chr3:75948970-75948989 None:intergenic 45.0%
!!! GGGTTTTGGGATATGGTGAA+GGG + Chr3:75954186-75954205 MsG0380015858.01.T01:CDS 45.0%
!!! GGTCCTTCGTCTTTTTCAAG+TGG - Chr3:75952826-75952845 None:intergenic 45.0%
!!! TGGGTTTTGGGATATGGTGA+AGG + Chr3:75954185-75954204 MsG0380015858.01.T01:CDS 45.0%
!! AAATTTCAAAAATAAAATAA+AGG + Chr3:75951231-75951250 MsG0380015858.01.T01:intron 5.0%
!! TTAAAAATCATTAATTAATA+TGG + Chr3:75952591-75952610 MsG0380015858.01.T01:intron 5.0%
!! TTAAAATTATAATTTAATCA+TGG + Chr3:75951280-75951299 MsG0380015858.01.T01:intron 5.0%
AAATGGGCCACCTAGTTGCA+AGG - Chr3:75950922-75950941 None:intergenic 50.0%
ACAAGGACCACTCCCTGTTA+AGG - Chr3:75950854-75950873 None:intergenic 50.0%
AGGCAGATAACCCTGGTGTT+TGG + Chr3:75954312-75954331 MsG0380015858.01.T01:CDS 50.0%
ATAAGGACCCTCTCTCTCCT+GGG - Chr3:75950778-75950797 None:intergenic 50.0%
ATCGTGCGGTGTGAGGATTT+CGG - Chr3:75953843-75953862 None:intergenic 50.0%
ATCTCATTGGGGCTGAAGAG+AGG - Chr3:75949666-75949685 None:intergenic 50.0%
CAATGGAATGCCCAAACACC+AGG - Chr3:75954326-75954345 None:intergenic 50.0%
CCAACTGAGCTTAACTCACG+AGG + Chr3:75952394-75952413 MsG0380015858.01.T01:intron 50.0%
CCAATGGAGGGTCCTTAACA+GGG + Chr3:75950839-75950858 MsG0380015858.01.T01:intron 50.0%
CCTCGTGAGTTAAGCTCAGT+TGG - Chr3:75952397-75952416 None:intergenic 50.0%
CTCTCTCCTGGGTAACTAAC+GGG - Chr3:75950767-75950786 None:intergenic 50.0%
GGAATCAATGGCCAGTTTCC+AGG + Chr3:75948914-75948933 MsG0380015858.01.T01:CDS 50.0%
GGAGTTGGCATGTGAAACAC+TGG + Chr3:75952915-75952934 MsG0380015858.01.T01:intron 50.0%
GGCAGATAACCCTGGTGTTT+GGG + Chr3:75954313-75954332 MsG0380015858.01.T01:CDS 50.0%
GGTGAAGGGAGATTTAGACC+AGG + Chr3:75954200-75954219 MsG0380015858.01.T01:CDS 50.0%
GGTGTTAGAGGCAGAAAACC+AGG + Chr3:75953664-75953683 MsG0380015858.01.T01:intron 50.0%
GTCCTTGGCTTCTCTCAACT+TGG + Chr3:75951674-75951693 MsG0380015858.01.T01:intron 50.0%
GTGCACCCAGATTCTTCATG+TGG + Chr3:75951611-75951630 MsG0380015858.01.T01:intron 50.0%
GTTAGTTACCCAGGAGAGAG+AGG + Chr3:75950767-75950786 MsG0380015858.01.T01:intron 50.0%
TATAAGGACCCTCTCTCTCC+TGG - Chr3:75950779-75950798 None:intergenic 50.0%
TCACTGGCATGGAATCAGAC+AGG + Chr3:75949015-75949034 MsG0380015858.01.T01:CDS 50.0%
TCAGCCCCAATGAGATGGAT+TGG + Chr3:75949670-75949689 MsG0380015858.01.T01:CDS 50.0%
TCCAATGGAGGGTCCTTAAC+AGG + Chr3:75950838-75950857 MsG0380015858.01.T01:intron 50.0%
TCTCTTCAGCCCCAATGAGA+TGG + Chr3:75949665-75949684 MsG0380015858.01.T01:CDS 50.0%
TGTTAAGGACCCTCCATTGG+AGG - Chr3:75950839-75950858 None:intergenic 50.0%
! AGCTTGCTCATCAATGGACG+AGG + Chr3:75951511-75951530 MsG0380015858.01.T01:intron 50.0%
! GCATAGTGATTGGTCGGAGT+TGG + Chr3:75952900-75952919 MsG0380015858.01.T01:intron 50.0%
! TCGTTCCATAAGGGTGTGAC+TGG - Chr3:75953759-75953778 None:intergenic 50.0%
! TGGCTGTGGAGTTCCCATTT+TGG - Chr3:75953820-75953839 None:intergenic 50.0%
! TTCCATAAGGGTGTGACTGG+TGG - Chr3:75953756-75953775 None:intergenic 50.0%
! TTTGGAACTCCTTGGGCTGA+TGG + Chr3:75949145-75949164 MsG0380015858.01.T01:CDS 50.0%
!! CTGTATGGAGCTTGTTGGTG+AGG - Chr3:75948982-75949001 None:intergenic 50.0%
!! GAGATGGATTGGTGAACCAC+AGG + Chr3:75949681-75949700 MsG0380015858.01.T01:CDS 50.0%
!! GTGACTGGTGGTGGTAATGT+TGG - Chr3:75953744-75953763 None:intergenic 50.0%
CAAAGAGCAGCAGGGCTGTA+TGG + Chr3:75949526-75949545 MsG0380015858.01.T01:CDS 55.0%
CACCACCAGTCACACCCTTA+TGG + Chr3:75953751-75953770 MsG0380015858.01.T01:CDS 55.0%
CCCTGTTAAGGACCCTCCAT+TGG - Chr3:75950842-75950861 None:intergenic 55.0%
TGTGAGGATTTCGGTGGCTG+TGG - Chr3:75953834-75953853 None:intergenic 55.0%
TGTTAGGGCTTGTGTGTGCC+TGG - Chr3:75953685-75953704 None:intergenic 55.0%
! CATAAGGGTGTGACTGGTGG+TGG - Chr3:75953753-75953772 None:intergenic 55.0%
! GGCCAAGTTGAGAGAAGCCA+AGG - Chr3:75951679-75951698 None:intergenic 55.0%
! TGGGTGTGCTCAAAGCACCA+TGG + Chr3:75953223-75953242 MsG0380015858.01.T01:CDS 55.0%
CACGGGGTATGTGACAGCCT+AGG + Chr3:75948617-75948636 MsG0380015858.01.T01:five_prime_UTR 60.0%
CTAGGCTGTCACATACCCCG+TGG - Chr3:75948619-75948638 None:intergenic 60.0%
GAGGAGAATCGTGCGGTGTG+AGG - Chr3:75953850-75953869 None:intergenic 60.0%
GCAGCAGTTCCATCAGCCCA+AGG - Chr3:75949157-75949176 None:intergenic 60.0%
GGAGGGTCCTTAACAGGGAG+TGG + Chr3:75950844-75950863 MsG0380015858.01.T01:intron 60.0%
GTGCGGTGTGAGGATTTCGG+TGG - Chr3:75953840-75953859 None:intergenic 60.0%
GTGGGACCCGTTAGTTACCC+AGG + Chr3:75950758-75950777 MsG0380015858.01.T01:intron 60.0%
! CAAGGTTCGGGTTCGAACCC+TGG - Chr3:75952352-75952371 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 75948480 75954454 75948480 ID=MsG0380015858.01;Name=MsG0380015858.01
Chr3 mRNA 75948480 75954454 75948480 ID=MsG0380015858.01.T01;Parent=MsG0380015858.01;Name=MsG0380015858.01.T01;_AED=0.38;_eAED=0.42;_QI=296|0.4|0.5|1|1|1|6|0|488
Chr3 exon 75948480 75949036 75948480 ID=MsG0380015858.01.T01:exon:1115;Parent=MsG0380015858.01.T01
Chr3 exon 75949145 75949237 75949145 ID=MsG0380015858.01.T01:exon:1116;Parent=MsG0380015858.01.T01
Chr3 exon 75949490 75949702 75949490 ID=MsG0380015858.01.T01:exon:1117;Parent=MsG0380015858.01.T01
Chr3 exon 75953143 75953244 75953143 ID=MsG0380015858.01.T01:exon:1118;Parent=MsG0380015858.01.T01
Chr3 exon 75953520 75953598 75953520 ID=MsG0380015858.01.T01:exon:1119;Parent=MsG0380015858.01.T01
Chr3 exon 75953736 75954454 75953736 ID=MsG0380015858.01.T01:exon:1120;Parent=MsG0380015858.01.T01
Chr3 five_prime_UTR 75948480 75948775 75948480 ID=MsG0380015858.01.T01:five_prime_utr;Parent=MsG0380015858.01.T01
Chr3 CDS 75948776 75949036 75948776 ID=MsG0380015858.01.T01:cds;Parent=MsG0380015858.01.T01
Chr3 CDS 75949145 75949237 75949145 ID=MsG0380015858.01.T01:cds;Parent=MsG0380015858.01.T01
Chr3 CDS 75949490 75949702 75949490 ID=MsG0380015858.01.T01:cds;Parent=MsG0380015858.01.T01
Chr3 CDS 75953143 75953244 75953143 ID=MsG0380015858.01.T01:cds;Parent=MsG0380015858.01.T01
Chr3 CDS 75953520 75953598 75953520 ID=MsG0380015858.01.T01:cds;Parent=MsG0380015858.01.T01
Chr3 CDS 75953736 75954454 75953736 ID=MsG0380015858.01.T01:cds;Parent=MsG0380015858.01.T01
Gene Sequence

>MsG0380015858.01.T01

ATGAGTTTGCTGAAAGCAGTTTTTGTTTGGTGCATATGGTTAGGGTTATTTGAGTTATCATTAGCAAAAGTGAGACACTACAAGTTTGATGTTGAATACATATACAAAAAGCCAGATTGTGTGGAGCATGTTGTGATGGGAATCAATGGCCAGTTTCCAGGCCCAACTATTAAAGCTGAAGTTAATGACACCCTTGTCATTGACCTCACCAACAAGCTCCATACAGAAGGAACTGTTATTCACTGGCATGGAATCAGACAGTTTGGAACTCCTTGGGCTGATGGAACTGCTGCAATCTCTCAGTGTGCTATAAATCCAGGAGAAACTTTTCAATACAGATTCAAAGTTGACAGGCCTGGTACATATTTCTATCATGGACATTTTGGTATGCAAAGAGCAGCAGGGCTGTATGGTTCTCTAATAGTGGATTTACCAAAGGAACAAAGAGAGCCATTTCATTATGATGGTGAGTTTAATCTGCTCCTTAGTGATCTGTGGCACACAAGCTCACATGAACAAGAGGTTGGCCTCTCTTCAGCCCCAATGAGATGGATTGGTGAACCACAGGAAAAGTTGAATTTAAATCTTGGTTGGTTGTTAGATTTTACTTACAATCTGACTATCCAATTATGGGGACCAAATTGGATTGGGTGTGCTCAAAGCACCATGAATCACAAACTTATTGTGGTGGAAGCAGATGGAAACTACGTGCACCCATTCGCAGTTGATGACATCGACATCTACTCAGTTTTTCCAACATTACCACCACCAGTCACACCCTTATGGAACGATACCGAACACAGCAAAGCATTCACAAAACAAATCATTTCCAAAATGGGAACTCCACAGCCACCGAAATCCTCACACCGCACGATTCTCCTCCTCAATACACAAAACAAAATCGGTAGTTTCACTAAATGGGCTATTAACAATGTTTCATTAACATTGCCAACCACACCTTACTTAGGATCAATCAAATTTAAGCTAAACAATACATTTGATAGAAATCCACCACCAGAGAGATTTCCAATGGATTATGACATATTTAAAAATCCAGTTAATCCAAATACAACTACCGGTAACGGTGTTTACACGTTTCAGTTGAATGAGGTTGTTGATGTGATACTACAAAATGCAAACCAGTTAAATGGGAATGGTAGTGAAATTCATCCATGGCATTTGCATGGACATGATTTTTGGGTTTTGGGATATGGTGAAGGGAGATTTAGACCAGGTGTTGATGAGAAAAGTTTCAATTTGAAACGTGCACCTTTGAGGAACACTGCAGTTATATTTCCATATGGTTGGACTGCATTAAGGTTTAAGGCAGATAACCCTGGTGTTTGGGCATTCCATTGTCACATTGAACCACATTTGCATATGGGAATGGGTGTTATTTTTGCTGAGGCTGTTCATAAAGTTAGGAACATACCTAAAGAAGCTCTTAAGTGTGGTGCTACAGCCTAG
Protein sequence

>MsG0380015858.01.T01

MSLLKAVFVWCIWLGLFELSLAKVRHYKFDVEYIYKKPDCVEHVVMGINGQFPGPTIKAEVNDTLVIDLTNKLHTEGTVIHWHGIRQFGTPWADGTAAISQCAINPGETFQYRFKVDRPGTYFYHGHFGMQRAAGLYGSLIVDLPKEQREPFHYDGEFNLLLSDLWHTSSHEQEVGLSSAPMRWIGEPQEKLNLNLGWLLDFTYNLTIQLWGPNWIGCAQSTMNHKLIVVEADGNYVHPFAVDDIDIYSVFPTLPPPVTPLWNDTEHSKAFTKQIISKMGTPQPPKSSHRTILLLNTQNKIGSFTKWAINNVSLTLPTTPYLGSIKFKLNNTFDRNPPPERFPMDYDIFKNPVNPNTTTGNGVYTFQLNEVVDVILQNANQLNGNGSEIHPWHLHGHDFWVLGYGEGRFRPGVDEKSFNLKRAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGVIFAEAVHKVRNIPKEALKCGATA*