AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034914.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034914.01.T02 MTR_6g077870 98.828 256 3 0 193 448 457 712 0.0 524
MsG0680034914.01.T02 MTR_6g077870 96.721 122 4 0 1 122 162 283 9.83e-74 245
MsG0680034914.01.T02 MTR_6g077870 98.828 256 3 0 193 448 296 551 0.0 520
MsG0680034914.01.T02 MTR_6g077870 96.721 122 4 0 1 122 1 122 5.33e-75 244
MsG0680034914.01.T02 MTR_5g091600 76.863 255 58 1 193 446 426 680 1.34e-139 416
MsG0680034914.01.T02 MTR_5g091600 72.800 125 31 1 1 122 130 254 1.46e-52 187
MsG0680034914.01.T02 MTR_3g063490 77.255 255 57 1 193 446 440 694 1.24e-137 411
MsG0680034914.01.T02 MTR_3g063490 71.200 125 33 1 1 122 144 268 1.25e-50 182
MsG0680034914.01.T02 MTR_3g063520 77.043 257 58 1 193 448 434 690 3.25e-131 394
MsG0680034914.01.T02 MTR_3g063520 72.000 125 32 1 1 122 138 262 2.28e-51 184
MsG0680034914.01.T02 MTR_7g028250 60.744 242 92 3 193 433 434 673 7.14e-100 313
MsG0680034914.01.T02 MTR_7g028250 63.063 111 40 1 13 122 152 262 1.71e-39 151
MsG0680034914.01.T02 MTR_3g092090 61.570 242 90 3 193 433 424 663 7.16e-97 305
MsG0680034914.01.T02 MTR_3g092090 63.551 107 39 0 16 122 151 257 3.57e-40 153
MsG0680034914.01.T02 MTR_0312s0020 57.143 245 102 3 193 436 430 672 9.46e-93 294
MsG0680034914.01.T02 MTR_0312s0020 54.701 117 53 0 6 122 145 261 8.47e-36 140
MsG0680034914.01.T02 MTR_1g007540 57.143 245 102 3 193 436 430 672 9.46e-93 294
MsG0680034914.01.T02 MTR_1g007540 54.701 117 53 0 6 122 145 261 8.47e-36 140
MsG0680034914.01.T02 MTR_1g007580 55.918 245 105 3 193 436 430 672 2.49e-91 291
MsG0680034914.01.T02 MTR_1g007580 55.556 117 52 0 6 122 145 261 1.36e-36 142
MsG0680034914.01.T02 MTR_3g092090 61.207 232 87 3 193 423 424 653 1.70e-90 288
MsG0680034914.01.T02 MTR_3g092090 63.551 107 39 0 16 122 151 257 3.39e-40 153
MsG0680034914.01.T02 MTR_1g077840 54.508 244 108 3 193 435 438 679 4.50e-90 288
MsG0680034914.01.T02 MTR_1g077840 52.542 118 55 1 5 122 153 269 3.11e-35 139
MsG0680034914.01.T02 MTR_5g091615 69.565 161 48 1 286 445 59 219 1.77e-70 225
MsG0680034914.01.T01 MTR_6g077870 98.828 256 3 0 193 448 457 712 0.0 524
MsG0680034914.01.T01 MTR_6g077870 96.721 122 4 0 1 122 162 283 9.83e-74 245
MsG0680034914.01.T01 MTR_6g077870 98.828 256 3 0 193 448 296 551 0.0 520
MsG0680034914.01.T01 MTR_6g077870 96.721 122 4 0 1 122 1 122 5.33e-75 244
MsG0680034914.01.T01 MTR_5g091600 76.863 255 58 1 193 446 426 680 1.34e-139 416
MsG0680034914.01.T01 MTR_5g091600 72.800 125 31 1 1 122 130 254 1.46e-52 187
MsG0680034914.01.T01 MTR_3g063490 77.255 255 57 1 193 446 440 694 1.24e-137 411
MsG0680034914.01.T01 MTR_3g063490 71.200 125 33 1 1 122 144 268 1.25e-50 182
MsG0680034914.01.T01 MTR_3g063520 77.043 257 58 1 193 448 434 690 3.25e-131 394
MsG0680034914.01.T01 MTR_3g063520 72.000 125 32 1 1 122 138 262 2.28e-51 184
MsG0680034914.01.T01 MTR_7g028250 60.744 242 92 3 193 433 434 673 7.14e-100 313
MsG0680034914.01.T01 MTR_7g028250 63.063 111 40 1 13 122 152 262 1.71e-39 151
MsG0680034914.01.T01 MTR_3g092090 61.570 242 90 3 193 433 424 663 7.16e-97 305
MsG0680034914.01.T01 MTR_3g092090 63.551 107 39 0 16 122 151 257 3.57e-40 153
MsG0680034914.01.T01 MTR_0312s0020 57.143 245 102 3 193 436 430 672 9.46e-93 294
MsG0680034914.01.T01 MTR_0312s0020 54.701 117 53 0 6 122 145 261 8.47e-36 140
MsG0680034914.01.T01 MTR_1g007540 57.143 245 102 3 193 436 430 672 9.46e-93 294
MsG0680034914.01.T01 MTR_1g007540 54.701 117 53 0 6 122 145 261 8.47e-36 140
MsG0680034914.01.T01 MTR_1g007580 55.918 245 105 3 193 436 430 672 2.49e-91 291
MsG0680034914.01.T01 MTR_1g007580 55.556 117 52 0 6 122 145 261 1.36e-36 142
MsG0680034914.01.T01 MTR_3g092090 61.207 232 87 3 193 423 424 653 1.70e-90 288
MsG0680034914.01.T01 MTR_3g092090 63.551 107 39 0 16 122 151 257 3.39e-40 153
MsG0680034914.01.T01 MTR_1g077840 54.508 244 108 3 193 435 438 679 4.50e-90 288
MsG0680034914.01.T01 MTR_1g077840 52.542 118 55 1 5 122 153 269 3.11e-35 139
MsG0680034914.01.T01 MTR_5g091615 69.565 161 48 1 286 445 59 219 1.77e-70 225
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034914.01.T02 AT1G48370 78.824 255 53 1 193 446 303 557 1.44e-144 424
MsG0680034914.01.T02 AT1G48370 76.423 123 28 1 1 122 1 123 6.40e-44 162
MsG0680034914.01.T02 AT1G65730 79.216 255 52 1 193 446 431 685 9.81e-144 427
MsG0680034914.01.T02 AT1G65730 76.800 125 26 1 1 122 136 260 2.57e-58 203
MsG0680034914.01.T02 AT1G48370 78.824 255 53 1 193 446 466 720 2.00e-143 427
MsG0680034914.01.T02 AT1G48370 76.423 123 28 1 1 122 164 286 2.80e-43 162
MsG0680034914.01.T02 AT3G17650 76.471 255 59 1 193 446 456 710 2.10e-140 419
MsG0680034914.01.T02 AT3G17650 78.049 123 26 1 1 122 155 277 1.48e-44 166
MsG0680034914.01.T02 AT3G17650 76.471 255 59 1 193 446 456 710 2.10e-140 419
MsG0680034914.01.T02 AT3G17650 78.049 123 26 1 1 122 155 277 1.48e-44 166
MsG0680034914.01.T02 AT3G27020 63.636 242 85 3 193 433 431 670 7.24e-105 326
MsG0680034914.01.T02 AT3G27020 60.526 114 44 1 10 122 145 258 9.58e-38 146
MsG0680034914.01.T02 AT5G45450 66.972 218 65 2 230 446 1 212 7.41e-102 303
MsG0680034914.01.T02 AT4G24120 60.246 244 94 3 193 435 431 672 8.00e-101 315
MsG0680034914.01.T02 AT4G24120 57.391 115 48 1 8 122 152 265 2.39e-37 145
MsG0680034914.01.T02 AT5G53550 60.494 243 93 3 193 434 267 507 1.82e-99 307
MsG0680034914.01.T02 AT5G53550 62.000 100 38 0 23 122 1 100 2.88e-34 134
MsG0680034914.01.T02 AT5G41000 61.157 242 91 3 193 433 252 491 3.20e-99 306
MsG0680034914.01.T02 AT5G41000 58.228 79 32 1 45 122 1 79 1.18e-22 100
MsG0680034914.01.T02 AT5G53550 60.494 243 93 3 193 434 429 669 1.45e-98 310
MsG0680034914.01.T02 AT5G53550 61.682 107 41 0 16 122 156 262 3.74e-38 147
MsG0680034914.01.T02 AT5G53550 60.494 243 93 3 193 434 429 669 1.45e-98 310
MsG0680034914.01.T02 AT5G53550 61.682 107 41 0 16 122 156 262 3.74e-38 147
MsG0680034914.01.T02 AT5G53550 60.494 243 93 3 193 434 429 669 1.45e-98 310
MsG0680034914.01.T02 AT5G53550 61.682 107 41 0 16 122 156 262 3.74e-38 147
MsG0680034914.01.T02 AT5G53550 60.494 243 93 3 193 434 429 669 1.45e-98 310
MsG0680034914.01.T02 AT5G53550 61.682 107 41 0 16 122 156 262 3.74e-38 147
MsG0680034914.01.T02 AT5G53550 60.494 243 93 3 193 434 429 669 1.45e-98 310
MsG0680034914.01.T02 AT5G53550 61.682 107 41 0 16 122 156 262 3.74e-38 147
MsG0680034914.01.T02 AT5G41000 61.157 242 91 3 193 433 403 642 7.79e-98 307
MsG0680034914.01.T02 AT5G41000 57.895 114 47 1 10 122 142 255 5.86e-36 140
MsG0680034914.01.T02 AT5G41000 61.157 242 91 3 193 433 428 667 9.59e-98 307
MsG0680034914.01.T02 AT5G41000 57.895 114 47 1 10 122 142 255 5.52e-36 140
MsG0680034914.01.T02 AT5G24380 58.678 242 97 3 193 433 421 660 3.74e-95 300
MsG0680034914.01.T02 AT5G24380 52.542 118 56 0 5 122 133 250 1.05e-35 140
MsG0680034914.01.T01 AT1G48370 78.824 255 53 1 193 446 303 557 1.44e-144 424
MsG0680034914.01.T01 AT1G48370 76.423 123 28 1 1 122 1 123 6.40e-44 162
MsG0680034914.01.T01 AT1G65730 79.216 255 52 1 193 446 431 685 9.81e-144 427
MsG0680034914.01.T01 AT1G65730 76.800 125 26 1 1 122 136 260 2.57e-58 203
MsG0680034914.01.T01 AT1G48370 78.824 255 53 1 193 446 466 720 2.00e-143 427
MsG0680034914.01.T01 AT1G48370 76.423 123 28 1 1 122 164 286 2.80e-43 162
MsG0680034914.01.T01 AT3G17650 76.471 255 59 1 193 446 456 710 2.10e-140 419
MsG0680034914.01.T01 AT3G17650 78.049 123 26 1 1 122 155 277 1.48e-44 166
MsG0680034914.01.T01 AT3G17650 76.471 255 59 1 193 446 456 710 2.10e-140 419
MsG0680034914.01.T01 AT3G17650 78.049 123 26 1 1 122 155 277 1.48e-44 166
MsG0680034914.01.T01 AT3G27020 63.636 242 85 3 193 433 431 670 7.24e-105 326
MsG0680034914.01.T01 AT3G27020 60.526 114 44 1 10 122 145 258 9.58e-38 146
MsG0680034914.01.T01 AT5G45450 66.972 218 65 2 230 446 1 212 7.41e-102 303
MsG0680034914.01.T01 AT4G24120 60.246 244 94 3 193 435 431 672 8.00e-101 315
MsG0680034914.01.T01 AT4G24120 57.391 115 48 1 8 122 152 265 2.39e-37 145
MsG0680034914.01.T01 AT5G53550 60.494 243 93 3 193 434 267 507 1.82e-99 307
MsG0680034914.01.T01 AT5G53550 62.000 100 38 0 23 122 1 100 2.88e-34 134
MsG0680034914.01.T01 AT5G41000 61.157 242 91 3 193 433 252 491 3.20e-99 306
MsG0680034914.01.T01 AT5G41000 58.228 79 32 1 45 122 1 79 1.18e-22 100
MsG0680034914.01.T01 AT5G53550 60.494 243 93 3 193 434 429 669 1.45e-98 310
MsG0680034914.01.T01 AT5G53550 61.682 107 41 0 16 122 156 262 3.74e-38 147
MsG0680034914.01.T01 AT5G53550 60.494 243 93 3 193 434 429 669 1.45e-98 310
MsG0680034914.01.T01 AT5G53550 61.682 107 41 0 16 122 156 262 3.74e-38 147
MsG0680034914.01.T01 AT5G53550 60.494 243 93 3 193 434 429 669 1.45e-98 310
MsG0680034914.01.T01 AT5G53550 61.682 107 41 0 16 122 156 262 3.74e-38 147
MsG0680034914.01.T01 AT5G53550 60.494 243 93 3 193 434 429 669 1.45e-98 310
MsG0680034914.01.T01 AT5G53550 61.682 107 41 0 16 122 156 262 3.74e-38 147
MsG0680034914.01.T01 AT5G53550 60.494 243 93 3 193 434 429 669 1.45e-98 310
MsG0680034914.01.T01 AT5G53550 61.682 107 41 0 16 122 156 262 3.74e-38 147
MsG0680034914.01.T01 AT5G41000 61.157 242 91 3 193 433 403 642 7.79e-98 307
MsG0680034914.01.T01 AT5G41000 57.895 114 47 1 10 122 142 255 5.86e-36 140
MsG0680034914.01.T01 AT5G41000 61.157 242 91 3 193 433 428 667 9.59e-98 307
MsG0680034914.01.T01 AT5G41000 57.895 114 47 1 10 122 142 255 5.52e-36 140
MsG0680034914.01.T01 AT5G24380 58.678 242 97 3 193 433 421 660 3.74e-95 300
MsG0680034914.01.T01 AT5G24380 52.542 118 56 0 5 122 133 250 1.05e-35 140

Find 133 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATTCTTCAAAGAAAATT+AGG 0.120361 6:-96562997 MsG0680034914.01.T02:five_prime_UTR
ACTTGTGTTGTTGCTTCTTC+TGG 0.151174 6:-96563646 MsG0680034914.01.T02:five_prime_UTR
TAATGTCTCTGCTGGTCTTT+TGG 0.168239 6:-96563760 MsG0680034914.01.T02:five_prime_UTR
CTTGGAGTGTGTTCCTCTTT+AGG 0.178242 6:-96562362 MsG0680034914.01.T02:five_prime_UTR
AGTATTCTCTTTCTAGTAAA+AGG 0.191217 6:+96563678 None:intergenic
AAAATTAATTTCATCAAATT+AGG 0.207611 6:+96561448 None:intergenic
TCAAATTAGTCCACCGAAAT+TGG 0.215033 6:+96562316 None:intergenic
CAAAACTTGGACTAAGTTCT+TGG 0.226417 6:-96563724 MsG0680034914.01.T02:five_prime_UTR
CTTGTATGAACAGGAGGATT+TGG 0.238454 6:-96561417 MsG0680034914.01.T02:five_prime_UTR
AAATTAAATTCTGTCCAAAT+TGG 0.246772 6:+96562541 None:intergenic
GAAAGGGCGTTGTTGTATTC+TGG 0.247054 6:-96563330 MsG0680034914.01.T02:five_prime_UTR
CTGTATTTATTAGTCCAATT+TGG 0.268477 6:-96562555 MsG0680034914.01.T02:five_prime_UTR
ATGTATGATGTAACCCATTT+TGG 0.273338 6:-96562415 MsG0680034914.01.T02:five_prime_UTR
AAGTCAAATTATACTACTTT+TGG 0.277651 6:-96562485 MsG0680034914.01.T02:five_prime_UTR
TTTATATTTAATTAATAGTT+TGG 0.283281 6:-96562439 MsG0680034914.01.T02:five_prime_UTR
CATAATCAATCATGGTAATA+AGG 0.289795 6:+96563452 None:intergenic
AAAGAAAATTAGGGCATGTT+TGG 0.295061 6:-96562987 MsG0680034914.01.T02:five_prime_UTR
ATTCTCTCTGGTGCCAATTT+CGG 0.300486 6:-96562329 MsG0680034914.01.T02:five_prime_UTR
CACCACTAGATCAACCAAAA+TGG 0.300885 6:+96562401 None:intergenic
GGATTTGGGAGTTACCTATT+TGG 0.309829 6:-96561402 MsG0680034914.01.T02:five_prime_UTR
TGCTGGCTTGCTTGGGACCT+TGG 0.310710 6:-96562380 MsG0680034914.01.T02:five_prime_UTR
GTCTTTAGATCCTTAAGATT+TGG 0.313849 6:+96564076 None:intergenic
ATATGTACTACAGTGGTTAA+TGG 0.331465 6:-96562764 MsG0680034914.01.T02:five_prime_UTR
AAATTGATAGTATGCTTGTT+AGG 0.338521 6:-96563144 MsG0680034914.01.T02:five_prime_UTR
ATTATTTGTGAGTACGTATA+GGG 0.340519 6:+96561687 None:intergenic
AACGCCCTTTCCCCATAAAA+AGG 0.343480 6:+96563342 None:intergenic
TCTAGTGGTGCTGGCTTGCT+TGG 0.346792 6:-96562388 MsG0680034914.01.T02:five_prime_UTR
GTATTACAAACTGTTTAATC+TGG 0.349024 6:-96561914 MsG0680034914.01.T02:five_prime_UTR
CTGAATATGATAGGAGTAGA+AGG 0.349270 6:-96562516 MsG0680034914.01.T02:five_prime_UTR
CTATTTGACAATGCTGACTA+TGG 0.354940 6:+96561878 None:intergenic
CATTATTTGTGAGTACGTAT+AGG 0.371130 6:+96561686 None:intergenic
CATTGTCAAATAGCTTCTAT+AGG 0.373393 6:-96561868 MsG0680034914.01.T02:five_prime_UTR
TCTTATCACTTGTATGTTTG+TGG 0.374408 6:+96562167 None:intergenic
TTGTATGAACAGGAGGATTT+GGG 0.383317 6:-96561416 MsG0680034914.01.T02:five_prime_UTR
TTTGGTTGATCTAGTGGTGC+TGG 0.384474 6:-96562397 MsG0680034914.01.T02:five_prime_UTR
GGTCTTAGTTTGATTCTCTC+TGG 0.386209 6:-96562341 MsG0680034914.01.T02:five_prime_UTR
TCTGCCCCGGTTGCCTTATG+AGG 0.387672 6:-96562006 MsG0680034914.01.T02:five_prime_UTR
CTATACGTACTCACAAATAA+TGG 0.389355 6:-96561685 MsG0680034914.01.T02:five_prime_UTR
TAATTCTTCAAAGAAAATTA+GGG 0.392713 6:-96562996 MsG0680034914.01.T02:five_prime_UTR
AAATTCCCTCATAAGGCAAC+CGG 0.396965 6:+96562000 None:intergenic
GTACAAACTACAAAACATAT+AGG 0.403552 6:+96561794 None:intergenic
GGTCAATGATTGTTCTAGTC+AGG 0.408276 6:-96563285 MsG0680034914.01.T02:five_prime_UTR
CTAGGTTGGGTCAAGACATT+GGG 0.408580 6:+96562136 None:intergenic
ATAATAATGAGCATGAAGAT+AGG 0.408695 6:-96564046 MsG0680034914.01.T02:five_prime_UTR
TGTGATTCACTTGTATGAAC+AGG 0.408940 6:-96561426 MsG0680034914.01.T02:five_prime_UTR
CTCAGTTGTGCCTCTTAGAA+AGG 0.409163 6:-96561271 MsG0680034914.01.T02:intron
GGAGGACCCGGCGGGGTAGG+CGG 0.409989 6:-96562043 MsG0680034914.01.T02:five_prime_UTR
CATGTTCACTCATACCAAAT+AGG 0.417530 6:+96561388 None:intergenic
CTAGTGGTGCTGGCTTGCTT+GGG 0.422573 6:-96562387 MsG0680034914.01.T02:five_prime_UTR
ATTGTCAAATAGCTTCTATA+GGG 0.422707 6:-96561867 MsG0680034914.01.T02:five_prime_UTR
TGTTAGGTTTGAAAATGATA+AGG 0.423593 6:-96563128 MsG0680034914.01.T02:five_prime_UTR
GTTAATATATATTGCTGTGT+TGG 0.423858 6:+96562094 None:intergenic
CTCACAAATAATGGCTATAG+TGG 0.424713 6:-96561676 MsG0680034914.01.T02:five_prime_UTR
CTGTATTCTTCTTGAGGAGG+AGG 0.427572 6:-96562061 MsG0680034914.01.T02:five_prime_UTR
TGGGTCAAGACATTGGGTTT+AGG 0.431360 6:+96562142 None:intergenic
TTAATATATATTGCTGTGTT+GGG 0.431555 6:+96562095 None:intergenic
AGATAAGGATTGAGATAAGA+TGG 0.434071 6:-96563047 MsG0680034914.01.T02:five_prime_UTR
TATTGCTGTGTTGGGCTATG+AGG 0.434673 6:+96562103 None:intergenic
TAGATCCTTAAGATTTGGTT+CGG 0.435918 6:+96564081 None:intergenic
AGAGATGTCAACGTGACAGC+TGG 0.441714 6:-96562262 MsG0680034914.01.T02:five_prime_UTR
ATGAGCCTTGGAATAGCAAC+AGG 0.444628 6:-96562686 MsG0680034914.01.T02:five_prime_UTR
GTAGTACATATTTGACTAGC+TGG 0.445739 6:+96562776 None:intergenic
ACCCGGCGGGGTAGGCGGCT+TGG 0.447657 6:-96562038 MsG0680034914.01.T02:five_prime_UTR
CATTGACCAGACTTTACTTA+CGG 0.458592 6:+96563300 None:intergenic
AATCAAACTAAGACCTAAAG+AGG 0.460330 6:+96562349 None:intergenic
TACAAACTACAAAACATATA+GGG 0.461813 6:+96561795 None:intergenic
ATCACTTGAATTTAATCACT+TGG 0.466346 6:-96563213 MsG0680034914.01.T02:five_prime_UTR
GCAATTATCCATCCCAACTT+AGG 0.467065 6:+96561327 None:intergenic
AGTATCCGAACCAAATCTTA+AGG 0.471370 6:-96564086 MsG0680034914.01.T02:five_prime_UTR
CCTTCACTTAATGTCTCTGC+TGG 0.473944 6:-96563768 MsG0680034914.01.T02:five_prime_UTR
AAGAACTTTGAAAATTTATG+TGG 0.474457 6:-96562578 MsG0680034914.01.T02:five_prime_UTR
AGCACTTATTAGTACCATCA+TGG 0.474614 6:-96563890 MsG0680034914.01.T02:five_prime_UTR
TACCAAGCCGCCTACCCCGC+CGG 0.474820 6:+96562036 None:intergenic
AAATTAGGGCATGTTTGGAT+TGG 0.477640 6:-96562982 MsG0680034914.01.T02:five_prime_UTR
ACCACTAGATCAACCAAAAT+GGG 0.478338 6:+96562402 None:intergenic
GGAGGAGGACCCGGCGGGGT+AGG 0.479109 6:-96562046 MsG0680034914.01.T02:five_prime_UTR
CTTGAGGAGGAGGACCCGGC+GGG 0.479907 6:-96562051 MsG0680034914.01.T02:five_prime_UTR
GCAATAGCACTCTAGTATAG+TGG 0.480007 6:-96561652 MsG0680034914.01.T02:five_prime_UTR
ATGAAACTTAATCTTACTAC+TGG 0.492220 6:-96563798 MsG0680034914.01.T02:five_prime_UTR
GCGATTGACAACATTGATCA+TGG 0.497648 6:-96561599 MsG0680034914.01.T02:five_prime_UTR
GTGTTGCTGTATTCTTCTTG+AGG 0.498791 6:-96562067 MsG0680034914.01.T02:five_prime_UTR
ACTAGGTTGGGTCAAGACAT+TGG 0.501196 6:+96562135 None:intergenic
TCTAGTCAGGATTAGAACTC+GGG 0.503901 6:-96563272 MsG0680034914.01.T02:five_prime_UTR
TGTCTGGAATATATGAGCCT+TGG 0.505605 6:-96562698 MsG0680034914.01.T02:five_prime_UTR
GTATTTACACTATAAGAACT+TGG 0.512009 6:-96562829 MsG0680034914.01.T02:five_prime_UTR
CCCTCTGTTTACTTCATGTG+TGG 0.515976 6:-96563518 MsG0680034914.01.T02:five_prime_UTR
ACCAAGCCGCCTACCCCGCC+GGG 0.517415 6:+96562037 None:intergenic
TCTTCTTGAGGAGGAGGACC+CGG 0.518422 6:-96562055 MsG0680034914.01.T02:five_prime_UTR
TACAAAGTATTGTCAAATAA+CGG 0.521035 6:-96561771 MsG0680034914.01.T02:five_prime_UTR
CTCTCTGGTGCCAATTTCGG+TGG 0.521326 6:-96562326 MsG0680034914.01.T02:five_prime_UTR
AAACATTACATAATCAATCA+TGG 0.523218 6:+96563444 None:intergenic
TTGCTGTATTCTTCTTGAGG+AGG 0.529233 6:-96562064 MsG0680034914.01.T02:five_prime_UTR
TTCTAGTCAGGATTAGAACT+CGG 0.529893 6:-96563273 MsG0680034914.01.T02:five_prime_UTR
GTCAACGTGACAGCTGGGGC+GGG 0.530350 6:-96562256 MsG0680034914.01.T02:five_prime_UTR
ATTGCTGTGTTGGGCTATGA+GGG 0.538789 6:+96562104 None:intergenic
GAGATGTCAACGTGACAGCT+GGG 0.539301 6:-96562261 MsG0680034914.01.T02:five_prime_UTR
TGTCAACGTGACAGCTGGGG+CGG 0.540729 6:-96562257 MsG0680034914.01.T02:five_prime_UTR
GATAAGGATTGAGATAAGAT+GGG 0.546014 6:-96563046 MsG0680034914.01.T02:five_prime_UTR
AGATGGGTTAGTGTTGAACT+TGG 0.548014 6:-96563030 MsG0680034914.01.T02:five_prime_UTR
TTAAGGATCCTAAGTTGGGA+TGG 0.551545 6:-96561335 MsG0680034914.01.T02:CDS
TAATAATGAGCATGAAGATA+GGG 0.554096 6:-96564045 MsG0680034914.01.T02:five_prime_UTR
AATTCCCTCATAAGGCAACC+GGG 0.554517 6:+96562001 None:intergenic
TTTGATGTTATGCATGTGAA+AGG 0.558046 6:-96561527 MsG0680034914.01.T02:five_prime_UTR
GTCAAATAACGGTTATACTC+TGG 0.560145 6:-96561760 MsG0680034914.01.T02:five_prime_UTR
ATGTTGTCAATCGCGGATTG+AGG 0.561201 6:+96561608 None:intergenic
AACAAAGAGGTTCTAGTACA+AGG 0.565986 6:-96563953 MsG0680034914.01.T02:five_prime_UTR
TCCACTGAAAATAAATTCTG+TGG 0.570231 6:-96561969 MsG0680034914.01.T02:five_prime_UTR
GTTAACTGATTCCTCCATGA+TGG 0.571809 6:+96563876 None:intergenic
CATAAATTGTCACAACAAAG+AGG 0.576106 6:-96563966 MsG0680034914.01.T02:five_prime_UTR
CTGCCCCGGTTGCCTTATGA+GGG 0.578755 6:-96562005 MsG0680034914.01.T02:five_prime_UTR
GATTCACTTGTATGAACAGG+AGG 0.579145 6:-96561423 MsG0680034914.01.T02:five_prime_UTR
TTGGTATCACATATCTGCCC+CGG 0.582084 6:-96562019 MsG0680034914.01.T02:five_prime_UTR
CTAAAGAGGAACACACTCCA+AGG 0.604124 6:+96562363 None:intergenic
TCTTGAGGAGGAGGACCCGG+CGG 0.606753 6:-96562052 MsG0680034914.01.T02:five_prime_UTR
TCTTGGTATAAGCTGAACCA+TGG 0.618632 6:+96562597 None:intergenic
TGTCTTGACCCAACCTAGTG+AGG 0.622808 6:-96562131 MsG0680034914.01.T02:five_prime_UTR
ATGATCAATGTTGTCAATCG+CGG 0.623530 6:+96561601 None:intergenic
GAAGATAGGGTAGTTGACAA+TGG 0.624032 6:-96564032 MsG0680034914.01.T02:five_prime_UTR
TGCTGTGTTGGGCTATGAGG+GGG 0.628779 6:+96562106 None:intergenic
CACAGCAATATATATTAACG+AGG 0.645353 6:-96562090 MsG0680034914.01.T02:five_prime_UTR
TTGCTGTGTTGGGCTATGAG+GGG 0.648285 6:+96562105 None:intergenic
CCAGCAGAGACATTAAGTGA+AGG 0.650274 6:+96563768 None:intergenic
CCACACATGAAGTAAACAGA+GGG 0.657518 6:+96563518 None:intergenic
TTGTCAAATAGCTTCTATAG+GGG 0.660874 6:-96561866 MsG0680034914.01.T02:five_prime_UTR
AGATGTCAACGTGACAGCTG+GGG 0.668471 6:-96562260 MsG0680034914.01.T02:five_prime_UTR
TTGAGGAGGAGGACCCGGCG+GGG 0.670749 6:-96562050 MsG0680034914.01.T02:five_prime_UTR
ATCTTAAGGATCTAAAGACA+TGG 0.673015 6:-96564072 MsG0680034914.01.T02:five_prime_UTR
ATTCCCTCATAAGGCAACCG+GGG 0.676648 6:+96562002 None:intergenic
TAGTCAAATATGTACTACAG+TGG 0.695540 6:-96562771 MsG0680034914.01.T02:five_prime_UTR
ACCACACATGAAGTAAACAG+AGG 0.709593 6:+96563517 None:intergenic
TTCTTCTCTACGTATCTCGG+CGG 0.715197 6:-96562193 MsG0680034914.01.T02:five_prime_UTR
ACAGCAATATATATTAACGA+GGG 0.723850 6:-96562089 MsG0680034914.01.T02:five_prime_UTR
ACTTATTAGTACCATCATGG+AGG 0.730761 6:-96563887 MsG0680034914.01.T02:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAATTTCATCAAATT+AGG + Chr6:96561379-96561398 None:intergenic 10.0%
!! ATCTAAATTTATTTATTTGT+AGG - Chr6:96562596-96562615 MsG0680034914.01.T02:five_prime_UTR 10.0%
!! ATCATGGTTATTAAAAATAT+AGG - Chr6:96561241-96561260 MsG0680034914.01.T02:intron 15.0%
!! TAATTCTTCAAAGAAAATTA+GGG - Chr6:96559828-96559847 MsG0680034914.01.T02:intron 15.0%
!!! TAATTAATCGTACTTTTTTA+AGG - Chr6:96562945-96562964 MsG0680034914.01.T02:five_prime_UTR 15.0%
!!! TTAATTTTTCTGAATATGAT+AGG - Chr6:96560299-96560318 MsG0680034914.01.T02:intron 15.0%
!! AAACATTACATAATCAATCA+TGG + Chr6:96559383-96559402 None:intergenic 20.0%
!! AAATTAAATTCTGTCCAAAT+TGG + Chr6:96560286-96560305 None:intergenic 20.0%
!! AAGTTTGATATTGTTTGTTT+GGG - Chr6:96563903-96563922 MsG0680034914.01.T02:five_prime_UTR 20.0%
!! ACTGATACATTAATGATATA+TGG + Chr6:96562670-96562689 None:intergenic 20.0%
!! AGATCTTATGAAAAAAGATA+GGG - Chr6:96559911-96559930 MsG0680034914.01.T02:intron 20.0%
!! CTAATTCTTCAAAGAAAATT+AGG - Chr6:96559827-96559846 MsG0680034914.01.T02:intron 20.0%
!! TACAAACTACAAAACATATA+GGG + Chr6:96561032-96561051 None:intergenic 20.0%
!! TAGATCTTATGAAAAAAGAT+AGG - Chr6:96559910-96559929 MsG0680034914.01.T02:intron 20.0%
!! TCATGATATCATAGTAAAAA+AGG + Chr6:96559246-96559265 None:intergenic 20.0%
!! TTAATATATATTGCTGTGTT+GGG + Chr6:96560732-96560751 None:intergenic 20.0%
!! TTTGACAGAAAAAAAAATCT+TGG - Chr6:96560881-96560900 MsG0680034914.01.T02:intron 20.0%
!!! AAGAACTTTGAAAATTTATG+TGG - Chr6:96560246-96560265 MsG0680034914.01.T02:intron 20.0%
!!! AAGTCAAATTATACTACTTT+TGG - Chr6:96560339-96560358 MsG0680034914.01.T02:CDS 20.0%
!!! AATCTGTATTTTTCAAAGTA+TGG + Chr6:96560195-96560214 None:intergenic 20.0%
!!! ACATAAATTTTCAAAGTTCT+TGG + Chr6:96560247-96560266 None:intergenic 20.0%
!!! AGATTTTTCTATATTTTCCA+TGG - Chr6:96560210-96560229 MsG0680034914.01.T02:intron 20.0%
!!! ATATTTTATACCTTTCTAAG+AGG + Chr6:96561566-96561585 None:intergenic 20.0%
!!! ATGCTTTGTTATATATTCTT+TGG - Chr6:96563754-96563773 MsG0680034914.01.T02:five_prime_UTR 20.0%
!!! GATTTTTCTACACTTTATAT+TGG - Chr6:96562628-96562647 MsG0680034914.01.T02:five_prime_UTR 20.0%
!!! GCATTTTTTCAAATTATTAC+CGG - Chr6:96561966-96561985 MsG0680034914.01.T02:five_prime_UTR 20.0%
!!! TACAAAGTATTGTCAAATAA+CGG - Chr6:96561053-96561072 MsG0680034914.01.T02:intron 20.0%
!!! TATGTAATGTTTTTTCATGT+TGG - Chr6:96559268-96559287 MsG0680034914.01.T02:CDS 20.0%
!!! TCAAAACTGATTTTAAGTTA+CGG - Chr6:96561622-96561641 MsG0680034914.01.T02:five_prime_UTR 20.0%
! AAATAAGGTCCTAAATAGAA+AGG + Chr6:96563862-96563881 None:intergenic 25.0%
! ACAGCAATATATATTAACGA+GGG - Chr6:96560735-96560754 MsG0680034914.01.T02:intron 25.0%
! AGAATATATAACAAAGCATG+AGG + Chr6:96563753-96563772 None:intergenic 25.0%
! AGACAAATAGTTTAAACGAA+GGG + Chr6:96562556-96562575 None:intergenic 25.0%
! AGTCTATACCTATATTGAAA+GGG - Chr6:96562491-96562510 MsG0680034914.01.T02:five_prime_UTR 25.0%
! ATAATAATGAGCATGAAGAT+AGG - Chr6:96558778-96558797 MsG0680034914.01.T02:CDS 25.0%
! ATCACTTGAATTTAATCACT+TGG - Chr6:96559611-96559630 MsG0680034914.01.T02:intron 25.0%
! ATCCTTATCTCCAAAAAATT+AGG + Chr6:96559767-96559786 None:intergenic 25.0%
! ATGAAACTTAATCTTACTAC+TGG - Chr6:96559026-96559045 MsG0680034914.01.T02:CDS 25.0%
! ATTATTTGTGAGTACGTATA+GGG + Chr6:96561140-96561159 None:intergenic 25.0%
! ATTGTCAAATAGCTTCTATA+GGG - Chr6:96560957-96560976 MsG0680034914.01.T02:intron 25.0%
! CATAATCAATCATGGTAATA+AGG + Chr6:96559375-96559394 None:intergenic 25.0%
! CTGTATTTATTAGTCCAATT+TGG - Chr6:96560269-96560288 MsG0680034914.01.T02:intron 25.0%
! CTTATACTAAACTTTGAGTA+TGG + Chr6:96562214-96562233 None:intergenic 25.0%
! GAAGTTTGATATTGTTTGTT+TGG - Chr6:96563902-96563921 MsG0680034914.01.T02:five_prime_UTR 25.0%
! GTACAAACTACAAAACATAT+AGG + Chr6:96561033-96561052 None:intergenic 25.0%
! GTATTACAAACTGTTTAATC+TGG - Chr6:96560910-96560929 MsG0680034914.01.T02:intron 25.0%
! GTATTTACACTATAAGAACT+TGG - Chr6:96559995-96560014 MsG0680034914.01.T02:intron 25.0%
! GTTAATATATATTGCTGTGT+TGG + Chr6:96560733-96560752 None:intergenic 25.0%
! TAATAATGAGCATGAAGATA+GGG - Chr6:96558779-96558798 MsG0680034914.01.T02:CDS 25.0%
! TAGTCTATACCTATATTGAA+AGG - Chr6:96562490-96562509 MsG0680034914.01.T02:five_prime_UTR 25.0%
! TATTTGTCTCGTTCTAATTT+GGG - Chr6:96562567-96562586 MsG0680034914.01.T02:five_prime_UTR 25.0%
! TGAACAAGTTTGATTGAAAA+TGG + Chr6:96562450-96562469 None:intergenic 25.0%
! TGTTAGGTTTGAAAATGATA+AGG - Chr6:96559696-96559715 MsG0680034914.01.T02:intron 25.0%
! TTAAAAGTTGCTTCTGTTAA+TGG - Chr6:96562072-96562091 MsG0680034914.01.T02:five_prime_UTR 25.0%
! TTGATATTCCCTTTCAATAT+AGG + Chr6:96562502-96562521 None:intergenic 25.0%
!! AAATTGATAGTATGCTTGTT+AGG - Chr6:96559680-96559699 MsG0680034914.01.T02:intron 25.0%
!! ACACGTTCAATCTAAAATTT+CGG + Chr6:96561651-96561670 None:intergenic 25.0%
!! AGTATTCTCTTTCTAGTAAA+AGG + Chr6:96559149-96559168 None:intergenic 25.0%
!! GATTTTTCTTTGTCAAAACT+TGG - Chr6:96559087-96559106 MsG0680034914.01.T02:CDS 25.0%
!! TAAGGAATAGTCAAGATTTT+CGG - Chr6:96559714-96559733 MsG0680034914.01.T02:intron 25.0%
!! TTCTTAATCCTCCTTTTTAT+GGG - Chr6:96559471-96559490 MsG0680034914.01.T02:CDS 25.0%
!! TTTCTTAATCCTCCTTTTTA+TGG - Chr6:96559470-96559489 MsG0680034914.01.T02:CDS 25.0%
!!! AGGTAATACATTTTAGTTGA+GGG + Chr6:96563290-96563309 None:intergenic 25.0%
!!! ATCCTAATTTTTTGGAGATA+AGG - Chr6:96559762-96559781 MsG0680034914.01.T02:intron 25.0%
!!! CAAAACTGATTTTAAGTTAC+GGG - Chr6:96561623-96561642 MsG0680034914.01.T02:five_prime_UTR 25.0%
!!! TAGGTAATACATTTTAGTTG+AGG + Chr6:96563291-96563310 None:intergenic 25.0%
!!! TCTACAGTATCCTAATTTTT+TGG - Chr6:96559754-96559773 MsG0680034914.01.T02:intron 25.0%
AAAAATGCGTAACTCAATGT+AGG + Chr6:96561954-96561973 None:intergenic 30.0%
AAACTTTGAGTATGGTAAAG+TGG + Chr6:96562206-96562225 None:intergenic 30.0%
AAAGAAAATTAGGGCATGTT+TGG - Chr6:96559837-96559856 MsG0680034914.01.T02:intron 30.0%
AACTTGATTAAGGATTCTGT+TGG - Chr6:96563793-96563812 MsG0680034914.01.T02:five_prime_UTR 30.0%
AATCAAACTAAGACCTAAAG+AGG + Chr6:96560478-96560497 None:intergenic 30.0%
ACAGTTGAATCAAAATCAGA+TGG - Chr6:96561785-96561804 MsG0680034914.01.T02:five_prime_UTR 30.0%
AGATAAGGATTGAGATAAGA+TGG - Chr6:96559777-96559796 MsG0680034914.01.T02:intron 30.0%
ATATGTACTACAGTGGTTAA+TGG - Chr6:96560060-96560079 MsG0680034914.01.T02:CDS 30.0%
ATCTTAAGGATCTAAAGACA+TGG - Chr6:96558752-96558771 MsG0680034914.01.T02:CDS 30.0%
ATGGCAATACCTTTCTATTT+AGG - Chr6:96563850-96563869 MsG0680034914.01.T02:five_prime_UTR 30.0%
ATGTTTGTGAGCCAAATAAT+CGG - Chr6:96563562-96563581 MsG0680034914.01.T02:five_prime_UTR 30.0%
ATTAATGTATCAGTTCTCCT+TGG - Chr6:96562676-96562695 MsG0680034914.01.T02:five_prime_UTR 30.0%
ATTTGTCTCGTTCTAATTTG+GGG - Chr6:96562568-96562587 MsG0680034914.01.T02:five_prime_UTR 30.0%
CACAGCAATATATATTAACG+AGG - Chr6:96560734-96560753 MsG0680034914.01.T02:intron 30.0%
CACATGTGATTATATGGATT+TGG - Chr6:96561712-96561731 MsG0680034914.01.T02:five_prime_UTR 30.0%
CATAAATTGTCACAACAAAG+AGG - Chr6:96558858-96558877 MsG0680034914.01.T02:CDS 30.0%
CATTATTTGTGAGTACGTAT+AGG + Chr6:96561141-96561160 None:intergenic 30.0%
CATTGTCAAATAGCTTCTAT+AGG - Chr6:96560956-96560975 MsG0680034914.01.T02:intron 30.0%
CTATACGTACTCACAAATAA+TGG - Chr6:96561139-96561158 MsG0680034914.01.T02:intron 30.0%
CTATTTGTCTCGTTCTAATT+TGG - Chr6:96562566-96562585 MsG0680034914.01.T02:five_prime_UTR 30.0%
CTTATGCAAGATTTCAAAAC+CGG - Chr6:96563511-96563530 MsG0680034914.01.T02:five_prime_UTR 30.0%
GAGACAAATAGTTTAAACGA+AGG + Chr6:96562557-96562576 None:intergenic 30.0%
GATAAGGATTGAGATAAGAT+GGG - Chr6:96559778-96559797 MsG0680034914.01.T02:intron 30.0%
GATATTGTTTGTTTGGGAAA+AGG - Chr6:96563909-96563928 MsG0680034914.01.T02:five_prime_UTR 30.0%
GATTAATTACATTCAGTGGA+TGG + Chr6:96562934-96562953 None:intergenic 30.0%
GATTGTGGTAAACTTGATTA+AGG - Chr6:96563783-96563802 MsG0680034914.01.T02:five_prime_UTR 30.0%
GCAATCAGGTATATACAATT+AGG + Chr6:96563310-96563329 None:intergenic 30.0%
GTAAGGTGAAGCAAATTAAA+GGG + Chr6:96562974-96562993 None:intergenic 30.0%
GTACGATTAATTACATTCAG+TGG + Chr6:96562938-96562957 None:intergenic 30.0%
GTCTTTAGATCCTTAAGATT+TGG + Chr6:96558751-96558770 None:intergenic 30.0%
TAAAGATCAGATTTCCTACA+TGG - Chr6:96563200-96563219 MsG0680034914.01.T02:five_prime_UTR 30.0%
TAGAAAATCCAAAAGACACA+AGG + Chr6:96563613-96563632 None:intergenic 30.0%
TAGAGAAGAAAAAATCGTTG+TGG + Chr6:96560621-96560640 None:intergenic 30.0%
TAGTCAAATATGTACTACAG+TGG - Chr6:96560053-96560072 MsG0680034914.01.T02:CDS 30.0%
TCCACTGAAAATAAATTCTG+TGG - Chr6:96560855-96560874 MsG0680034914.01.T02:intron 30.0%
TCTACACTTTATATTGGTGT+GGG - Chr6:96562634-96562653 MsG0680034914.01.T02:five_prime_UTR 30.0%
TCTTATCACTTGTATGTTTG+TGG + Chr6:96560660-96560679 None:intergenic 30.0%
TGGTCTATACAACTTTGTTA+AGG - Chr6:96563041-96563060 MsG0680034914.01.T02:five_prime_UTR 30.0%
TGTAAGGTGAAGCAAATTAA+AGG + Chr6:96562975-96562994 None:intergenic 30.0%
TTCAAATTAACCTATCCAAG+TGG - Chr6:96562116-96562135 MsG0680034914.01.T02:five_prime_UTR 30.0%
TTCTACACTTTATATTGGTG+TGG - Chr6:96562633-96562652 MsG0680034914.01.T02:five_prime_UTR 30.0%
TTGACTATACAAACCCAATA+AGG + Chr6:96563079-96563098 None:intergenic 30.0%
TTGTCAAATAGCTTCTATAG+GGG - Chr6:96560958-96560977 MsG0680034914.01.T02:intron 30.0%
TTTGATGTTATGCATGTGAA+AGG - Chr6:96561297-96561316 MsG0680034914.01.T02:CDS 30.0%
! ATGTATGATGTAACCCATTT+TGG - Chr6:96560409-96560428 MsG0680034914.01.T02:CDS 30.0%
! CTCAGACAAAAGTGATTTTA+AGG - Chr6:96561472-96561491 MsG0680034914.01.T02:five_prime_UTR 30.0%
! CTGTTAATGGATGTAGATAA+TGG - Chr6:96562085-96562104 MsG0680034914.01.T02:five_prime_UTR 30.0%
! CTTTAAGAAAGAGTTGTTTC+CGG + Chr6:96563185-96563204 None:intergenic 30.0%
! GTTTTCAATATTTCACTGTC+TGG - Chr6:96560110-96560129 MsG0680034914.01.T02:CDS 30.0%
! TAATATCACCTTGTGTCTTT+TGG - Chr6:96563602-96563621 MsG0680034914.01.T02:five_prime_UTR 30.0%
! TAGATCCTTAAGATTTGGTT+CGG + Chr6:96558746-96558765 None:intergenic 30.0%
! TCTTAATCCTCCTTTTTATG+GGG - Chr6:96559472-96559491 MsG0680034914.01.T02:CDS 30.0%
! TTTTTCTTCTCTACGTATCT+CGG - Chr6:96560628-96560647 MsG0680034914.01.T02:intron 30.0%
!! AAACTAGCCATTTTCTCAAT+CGG - Chr6:96563400-96563419 MsG0680034914.01.T02:five_prime_UTR 30.0%
!! ATTGACTTTTATGTGTTCCT+AGG + Chr6:96563651-96563670 None:intergenic 30.0%
!! CTTAAAATCACTTTTGTCTG+AGG + Chr6:96561474-96561493 None:intergenic 30.0%
!! GAATTTATTTTCAGTGGAAG+TGG + Chr6:96560853-96560872 None:intergenic 30.0%
!! GATTTTAAGGATCCTAAGTT+GGG - Chr6:96561485-96561504 MsG0680034914.01.T02:five_prime_UTR 30.0%
!! TCCACAGAATTTATTTTCAG+TGG + Chr6:96560859-96560878 None:intergenic 30.0%
!! TGATTTTAAGGATCCTAAGT+TGG - Chr6:96561484-96561503 MsG0680034914.01.T02:five_prime_UTR 30.0%
!! TTTTCCTTTTCTACTTTTCC+AGG - Chr6:96562274-96562293 MsG0680034914.01.T02:five_prime_UTR 30.0%
!! TTTTCGGCAGAGTTTTTTTT+AGG - Chr6:96559730-96559749 MsG0680034914.01.T02:intron 30.0%
!!! CTCTTTGTTGTTAGCTTTTT+GGG - Chr6:96561524-96561543 MsG0680034914.01.T02:five_prime_UTR 30.0%
!!! TCTCTTTGTTGTTAGCTTTT+TGG - Chr6:96561523-96561542 MsG0680034914.01.T02:five_prime_UTR 30.0%
!!! TGTGACACTTGTTTTATTTC+TGG - Chr6:96559423-96559442 MsG0680034914.01.T02:CDS 30.0%
AAATAATCGGCACAACAATG+GGG - Chr6:96563575-96563594 MsG0680034914.01.T02:five_prime_UTR 35.0%
AAATCGTGCTTGACTGTATT+CGG - Chr6:96562860-96562879 MsG0680034914.01.T02:five_prime_UTR 35.0%
AAATTAGGGCATGTTTGGAT+TGG - Chr6:96559842-96559861 MsG0680034914.01.T02:intron 35.0%
ACAAGGATTCAGTTCTTTAC+CGG - Chr6:96563720-96563739 MsG0680034914.01.T02:five_prime_UTR 35.0%
ACACGACACATGTGATTATA+TGG - Chr6:96561706-96561725 MsG0680034914.01.T02:five_prime_UTR 35.0%
ACCACTAGATCAACCAAAAT+GGG + Chr6:96560425-96560444 None:intergenic 35.0%
ACTTATTAGTACCATCATGG+AGG - Chr6:96558937-96558956 MsG0680034914.01.T02:CDS 35.0%
AGAAGAAAAAATCGTTGTGG+CGG + Chr6:96560618-96560637 None:intergenic 35.0%
AGAGGTCATTGGTACAAAAA+AGG - Chr6:96562742-96562761 MsG0680034914.01.T02:five_prime_UTR 35.0%
AGCACTTATTAGTACCATCA+TGG - Chr6:96558934-96558953 MsG0680034914.01.T02:CDS 35.0%
AGGAAGCAAGTGAAATTGTT+GGG - Chr6:96562294-96562313 MsG0680034914.01.T02:five_prime_UTR 35.0%
AGTATCAACCCTATCATTTG+TGG + Chr6:96564076-96564095 None:intergenic 35.0%
AGTATCCGAACCAAATCTTA+AGG - Chr6:96558738-96558757 MsG0680034914.01.T02:CDS 35.0%
ATATGGATTTGGATTGTCTG+CGG - Chr6:96561723-96561742 MsG0680034914.01.T02:five_prime_UTR 35.0%
ATGATCAATGTTGTCAATCG+CGG + Chr6:96561226-96561245 None:intergenic 35.0%
CAAAACTTGGACTAAGTTCT+TGG - Chr6:96559100-96559119 MsG0680034914.01.T02:CDS 35.0%
CAAATAATCGGCACAACAAT+GGG - Chr6:96563574-96563593 MsG0680034914.01.T02:five_prime_UTR 35.0%
CAATACTAAAATGTCGACAC+CGG + Chr6:96561988-96562007 None:intergenic 35.0%
CACATGTCAATGGCAAAATA+AGG + Chr6:96563877-96563896 None:intergenic 35.0%
CATGTTCACTCATACCAAAT+AGG + Chr6:96561439-96561458 None:intergenic 35.0%
CATTCACGTAGTTAGTACAT+TGG + Chr6:96561901-96561920 None:intergenic 35.0%
CATTGACCAGACTTTACTTA+CGG + Chr6:96559527-96559546 None:intergenic 35.0%
CATTTATGCAGTCAACACAA+CGG - Chr6:96561760-96561779 MsG0680034914.01.T02:five_prime_UTR 35.0%
CTCACAAATAATGGCTATAG+TGG - Chr6:96561148-96561167 MsG0680034914.01.T02:intron 35.0%
CTGAATATGATAGGAGTAGA+AGG - Chr6:96560308-96560327 MsG0680034914.01.T02:intron 35.0%
CTTCAGTTTCAGCTTCTTAT+GGG - Chr6:96562323-96562342 MsG0680034914.01.T02:five_prime_UTR 35.0%
GACAAGAACTTCATGCAAAT+GGG + Chr6:96564048-96564067 None:intergenic 35.0%
GATTAAGGATTCTGTTGGTA+AGG - Chr6:96563798-96563817 MsG0680034914.01.T02:five_prime_UTR 35.0%
GGTGGTCGTTGAATTAATAT+CGG + Chr6:96561880-96561899 None:intergenic 35.0%
GTAGTACATATTTGACTAGC+TGG + Chr6:96560051-96560070 None:intergenic 35.0%
GTCAAATAACGGTTATACTC+TGG - Chr6:96561064-96561083 MsG0680034914.01.T02:intron 35.0%
GTCGTTGAATTAATATCGGA+TGG + Chr6:96561876-96561895 None:intergenic 35.0%
GTGCTAACTCATACCTTATT+GGG - Chr6:96563063-96563082 MsG0680034914.01.T02:five_prime_UTR 35.0%
GTGGAAAAAATTCCCTCATA+AGG + Chr6:96560834-96560853 None:intergenic 35.0%
TATAAACCTGCAGAACTCAA+TGG + Chr6:96562998-96563017 None:intergenic 35.0%
TCAAATTAGTCCACCGAAAT+TGG + Chr6:96560511-96560530 None:intergenic 35.0%
TCAAGGAATTCAAGGTTACA+GGG - Chr6:96562783-96562802 MsG0680034914.01.T02:five_prime_UTR 35.0%
TCTTATGGGGTTTCTTTCAA+TGG - Chr6:96562337-96562356 MsG0680034914.01.T02:five_prime_UTR 35.0%
TCTTCAGTTTCAGCTTCTTA+TGG - Chr6:96562322-96562341 MsG0680034914.01.T02:five_prime_UTR 35.0%
TGACAAGAACTTCATGCAAA+TGG + Chr6:96564049-96564068 None:intergenic 35.0%
TGTAACCTTGAATTCCTTGA+AGG + Chr6:96562783-96562802 None:intergenic 35.0%
TGTGATTCACTTGTATGAAC+AGG - Chr6:96561398-96561417 MsG0680034914.01.T02:exon 35.0%
TGTGTTCAAATATGCAGTAG+AGG + Chr6:96562837-96562856 None:intergenic 35.0%
TTCAAGGAATTCAAGGTTAC+AGG - Chr6:96562782-96562801 MsG0680034914.01.T02:five_prime_UTR 35.0%
TTCAGTTTCAGCTTCTTATG+GGG - Chr6:96562324-96562343 MsG0680034914.01.T02:five_prime_UTR 35.0%
TTCTAGTCAGGATTAGAACT+CGG - Chr6:96559551-96559570 MsG0680034914.01.T02:intron 35.0%
TTGTATGAACAGGAGGATTT+GGG - Chr6:96561408-96561427 MsG0680034914.01.T02:five_prime_UTR 35.0%
TTTGCATGAAGTTCTTGTCA+AGG - Chr6:96564049-96564068 MsG0680034914.01.T02:five_prime_UTR 35.0%
! AACAAAGAGGTTCTAGTACA+AGG - Chr6:96558871-96558890 MsG0680034914.01.T02:CDS 35.0%
! AAGTGGTTACTTTGCTAGTT+TGG + Chr6:96562189-96562208 None:intergenic 35.0%
! ACAGAAGCAACTTTTAAGCA+AGG + Chr6:96562069-96562088 None:intergenic 35.0%
! ACTTTTGTCTGAGGATTGAT+TGG + Chr6:96561465-96561484 None:intergenic 35.0%
! ATAGGCATTGCAAAATGCTA+AGG + Chr6:96563338-96563357 None:intergenic 35.0%
! ATGCTTTGAGTCCTAATGAA+GGG + Chr6:96562401-96562420 None:intergenic 35.0%
! CTATTTGACAATGCTGACTA+TGG + Chr6:96560949-96560968 None:intergenic 35.0%
! GATTATTTGGCTCACAAACA+TGG + Chr6:96563563-96563582 None:intergenic 35.0%
! TATGCTTTGAGTCCTAATGA+AGG + Chr6:96562402-96562421 None:intergenic 35.0%
! TTAGCATTTTGCAATGCCTA+TGG - Chr6:96563337-96563356 MsG0680034914.01.T02:five_prime_UTR 35.0%
! TTTTGACCGTAAGTAAAGTC+TGG - Chr6:96559518-96559537 MsG0680034914.01.T02:intron 35.0%
!! GAGATTATGAAGCATCGATA+CGG + Chr6:96562025-96562044 None:intergenic 35.0%
!! GATAGGGTTGATACTTTCTT+AGG - Chr6:96564081-96564100 MsG0680034914.01.T02:five_prime_UTR 35.0%
!! TGATATGTGGTGATGGAATA+TGG - Chr6:96563980-96563999 MsG0680034914.01.T02:five_prime_UTR 35.0%
!! TTTTTCCTGTTGCTATTCCA+AGG + Chr6:96560146-96560165 None:intergenic 35.0%
!!! GAAAATGGCTAGTTTTCCAT+AGG + Chr6:96563395-96563414 None:intergenic 35.0%
!!! TCTTCTGGAATTGCTTTTAG+TGG - Chr6:96559193-96559212 MsG0680034914.01.T02:CDS 35.0%
!!! TTTTCCATAGGTTGATGCTA+GGG + Chr6:96563383-96563402 None:intergenic 35.0%
AAATTCCCTCATAAGGCAAC+CGG + Chr6:96560827-96560846 None:intergenic 40.0%
AAGAACTTCATGCAAATGGG+AGG + Chr6:96564045-96564064 None:intergenic 40.0%
AATGTATCAGTTCTCCTTGG+AGG - Chr6:96562679-96562698 MsG0680034914.01.T02:five_prime_UTR 40.0%
ACCACACATGAAGTAAACAG+AGG + Chr6:96559310-96559329 None:intergenic 40.0%
ACTTCCAACACACATGTCAA+TGG + Chr6:96563887-96563906 None:intergenic 40.0%
AGCAACCTTCAAGGAATTCA+AGG - Chr6:96562775-96562794 MsG0680034914.01.T02:five_prime_UTR 40.0%
AGTTGTATAGACCATCTCCA+AGG + Chr6:96563035-96563054 None:intergenic 40.0%
ATCTGTTAGTCCACAACCAT+AGG + Chr6:96563356-96563375 None:intergenic 40.0%
CAAAGCATGAGGCAATTATC+CGG + Chr6:96563742-96563761 None:intergenic 40.0%
CAACAATTTCACTTGCTTCC+TGG + Chr6:96562295-96562314 None:intergenic 40.0%
CACCACTAGATCAACCAAAA+TGG + Chr6:96560426-96560445 None:intergenic 40.0%
CAGGAAGCAAGTGAAATTGT+TGG - Chr6:96562293-96562312 MsG0680034914.01.T02:five_prime_UTR 40.0%
CATTGGTACAAAAAAGGCCT+TGG - Chr6:96562748-96562767 MsG0680034914.01.T02:five_prime_UTR 40.0%
CCAAATAATCGGCACAACAA+TGG - Chr6:96563573-96563592 MsG0680034914.01.T02:five_prime_UTR 40.0%
CCACACATGAAGTAAACAGA+GGG + Chr6:96559309-96559328 None:intergenic 40.0%
CTGATCACGTAAGATAACTC+AGG + Chr6:96563160-96563179 None:intergenic 40.0%
CTTGTATGAACAGGAGGATT+TGG - Chr6:96561407-96561426 MsG0680034914.01.T02:five_prime_UTR 40.0%
GAAGATAGGGTAGTTGACAA+TGG - Chr6:96558792-96558811 MsG0680034914.01.T02:CDS 40.0%
GATTCACTTGTATGAACAGG+AGG - Chr6:96561401-96561420 MsG0680034914.01.T02:five_prime_UTR 40.0%
GATTGTCTGCAATCAGCAAT+CGG + Chr6:96561926-96561945 None:intergenic 40.0%
GCAATAGCACTCTAGTATAG+TGG - Chr6:96561172-96561191 MsG0680034914.01.T02:intron 40.0%
GCAATTATCCATCCCAACTT+AGG + Chr6:96561500-96561519 None:intergenic 40.0%
GCATTGCAAAATGCTAAGGT+TGG + Chr6:96563334-96563353 None:intergenic 40.0%
GCGATTGACAACATTGATCA+TGG - Chr6:96561225-96561244 MsG0680034914.01.T02:intron 40.0%
GCGTAACTCAATGTAGGATT+TGG + Chr6:96561948-96561967 None:intergenic 40.0%
GCTTCCTGGAAAAGTAGAAA+AGG + Chr6:96562281-96562300 None:intergenic 40.0%
GGATTTGGGAGTTACCTATT+TGG - Chr6:96561422-96561441 MsG0680034914.01.T02:five_prime_UTR 40.0%
GGTCAATGATTGTTCTAGTC+AGG - Chr6:96559539-96559558 MsG0680034914.01.T02:intron 40.0%
GGTGCTAACTCATACCTTAT+TGG - Chr6:96563062-96563081 MsG0680034914.01.T02:five_prime_UTR 40.0%
GTCAAGGTCCACAAATGATA+GGG - Chr6:96564065-96564084 MsG0680034914.01.T02:five_prime_UTR 40.0%
GTGTCACATCATTGTCTAAC+AGG + Chr6:96561690-96561709 None:intergenic 40.0%
TAAGATAACTCAGGACTCGA+GGG + Chr6:96563151-96563170 None:intergenic 40.0%
TCACGTAGTTAGTACATTGG+TGG + Chr6:96561898-96561917 None:intergenic 40.0%
TCTAGTCAGGATTAGAACTC+GGG - Chr6:96559552-96559571 MsG0680034914.01.T02:intron 40.0%
TCTTGGTATAAGCTGAACCA+TGG + Chr6:96560230-96560249 None:intergenic 40.0%
TGAATTCCTTGAAGGTTGCT+GGG + Chr6:96562775-96562794 None:intergenic 40.0%
TGGGTTTGTATAGTCAACTC+CGG - Chr6:96563082-96563101 MsG0680034914.01.T02:five_prime_UTR 40.0%
TGTCAAGGTCCACAAATGAT+AGG - Chr6:96564064-96564083 MsG0680034914.01.T02:five_prime_UTR 40.0%
TGTTTGGGAAAAGGTTGACA+AGG - Chr6:96563918-96563937 MsG0680034914.01.T02:five_prime_UTR 40.0%
TTCTTTCTTGGGGAGTAATG+TGG - Chr6:96562704-96562723 MsG0680034914.01.T02:five_prime_UTR 40.0%
TTGAATTCCTTGAAGGTTGC+TGG + Chr6:96562776-96562795 None:intergenic 40.0%
TTGCGGTACACAATTGCATA+GGG + Chr6:96563682-96563701 None:intergenic 40.0%
TTGCTGTATTCTTCTTGAGG+AGG - Chr6:96560760-96560779 MsG0680034914.01.T02:intron 40.0%
TTTCAAGCCTTCCCTTCATT+AGG - Chr6:96562387-96562406 MsG0680034914.01.T02:five_prime_UTR 40.0%
TTTGAGTCCTAATGAAGGGA+AGG + Chr6:96562397-96562416 None:intergenic 40.0%
TTTGCCATTGACATGTGTGT+TGG - Chr6:96563880-96563899 MsG0680034914.01.T02:five_prime_UTR 40.0%
! AAAAGAGCCAGTATTGAAGC+AGG + Chr6:96564012-96564031 None:intergenic 40.0%
! AAGGATTCTGTTGGTAAGGT+AGG - Chr6:96563802-96563821 MsG0680034914.01.T02:five_prime_UTR 40.0%
! ACTTGTGTTGTTGCTTCTTC+TGG - Chr6:96559178-96559197 MsG0680034914.01.T02:CDS 40.0%
! AGGATTCTGTTGGTAAGGTA+GGG - Chr6:96563803-96563822 MsG0680034914.01.T02:five_prime_UTR 40.0%
! ATCCTCCTTTTTATGGGGAA+AGG - Chr6:96559477-96559496 MsG0680034914.01.T02:CDS 40.0%
! ATGGTTGTGGACTAACAGAT+TGG - Chr6:96563356-96563375 MsG0680034914.01.T02:five_prime_UTR 40.0%
! ATGGTTTGCACATAGGGATA+TGG - Chr6:96563219-96563238 MsG0680034914.01.T02:five_prime_UTR 40.0%
! ATTCTCTCTGGTGCCAATTT+CGG - Chr6:96560495-96560514 MsG0680034914.01.T02:CDS 40.0%
! CTTTTATGTGTTCCTAGGTC+AGG + Chr6:96563646-96563665 None:intergenic 40.0%
! GGTCTTAGTTTGATTCTCTC+TGG - Chr6:96560483-96560502 MsG0680034914.01.T02:CDS 40.0%
! GTGTTGCTGTATTCTTCTTG+AGG - Chr6:96560757-96560776 MsG0680034914.01.T02:intron 40.0%
! GTTAACTGATTCCTCCATGA+TGG + Chr6:96558951-96558970 None:intergenic 40.0%
! TACAAAGCATTTCCTGACCT+AGG - Chr6:96563631-96563650 MsG0680034914.01.T02:five_prime_UTR 40.0%
! TCCTACATGGTTTGCACATA+GGG - Chr6:96563213-96563232 MsG0680034914.01.T02:five_prime_UTR 40.0%
! TCCTCCTTTTTATGGGGAAA+GGG - Chr6:96559478-96559497 MsG0680034914.01.T02:CDS 40.0%
! TCTGGTTTGATATGTGGTGA+TGG - Chr6:96563973-96563992 MsG0680034914.01.T02:five_prime_UTR 40.0%
! TGTCTGGAATATATGAGCCT+TGG - Chr6:96560126-96560145 MsG0680034914.01.T02:CDS 40.0%
! TTAAGGATCCTAAGTTGGGA+TGG - Chr6:96561489-96561508 MsG0680034914.01.T02:five_prime_UTR 40.0%
! TTCCTACATGGTTTGCACAT+AGG - Chr6:96563212-96563231 MsG0680034914.01.T02:five_prime_UTR 40.0%
! TTTTGCAATGCCTATGGTTG+TGG - Chr6:96563343-96563362 MsG0680034914.01.T02:five_prime_UTR 40.0%
! TTTTGTACCAATGACCTCTC+TGG + Chr6:96562741-96562760 None:intergenic 40.0%
!! AAAGGTATTGCCATAGCCAT+CGG + Chr6:96563844-96563863 None:intergenic 40.0%
!! AGATGGGTTAGTGTTGAACT+TGG - Chr6:96559794-96559813 MsG0680034914.01.T02:intron 40.0%
!! CCATTGTTGTGCCGATTATT+TGG + Chr6:96563576-96563595 None:intergenic 40.0%
!! GTTGCTTCTGGTTTGATATG+TGG - Chr6:96563967-96563986 MsG0680034914.01.T02:five_prime_UTR 40.0%
!! TTTTAGTTGAGGGAGATGTG+CGG + Chr6:96563280-96563299 None:intergenic 40.0%
!!! AATGTCTCTGCTGGTCTTTT+GGG - Chr6:96559065-96559084 MsG0680034914.01.T02:CDS 40.0%
!!! ACCCATTTTGGTTGATCTAG+TGG - Chr6:96560421-96560440 MsG0680034914.01.T02:CDS 40.0%
!!! GCTTCAATACTGGCTCTTTT+TGG - Chr6:96564012-96564031 MsG0680034914.01.T02:five_prime_UTR 40.0%
!!! GTTTTCCATAGGTTGATGCT+AGG + Chr6:96563384-96563403 None:intergenic 40.0%
!!! TAATGTCTCTGCTGGTCTTT+TGG - Chr6:96559064-96559083 MsG0680034914.01.T02:CDS 40.0%
AACGCCCTTTCCCCATAAAA+AGG + Chr6:96559485-96559504 None:intergenic 45.0%
AATTCCCTCATAAGGCAACC+GGG + Chr6:96560826-96560845 None:intergenic 45.0%
AGAAAAAATCGTTGTGGCGG+CGG + Chr6:96560615-96560634 None:intergenic 45.0%
AGTTGCAGTACCACTTGGAT+AGG + Chr6:96562129-96562148 None:intergenic 45.0%
ATAGCCATAGCCATGATCCT+TGG - Chr6:96563015-96563034 MsG0680034914.01.T02:five_prime_UTR 45.0%
ATAGCCATGATCCTTGGAGA+TGG - Chr6:96563021-96563040 MsG0680034914.01.T02:five_prime_UTR 45.0%
ATCAAACCAGAAGCAACAGC+AGG + Chr6:96563964-96563983 None:intergenic 45.0%
ATCTCCAAGGATCATGGCTA+TGG + Chr6:96563022-96563041 None:intergenic 45.0%
ATGAGCCTTGGAATAGCAAC+AGG - Chr6:96560138-96560157 MsG0680034914.01.T02:CDS 45.0%
ATGCTAAGGTTGGAGCAATC+AGG + Chr6:96563324-96563343 None:intergenic 45.0%
ATTGCTGTGTTGGGCTATGA+GGG + Chr6:96560723-96560742 None:intergenic 45.0%
CCAGCAGAGACATTAAGTGA+AGG + Chr6:96559059-96559078 None:intergenic 45.0%
CCCTCTGTTTACTTCATGTG+TGG - Chr6:96559306-96559325 MsG0680034914.01.T02:CDS 45.0%
CCTTCACTTAATGTCTCTGC+TGG - Chr6:96559056-96559075 MsG0680034914.01.T02:CDS 45.0%
CCTTGGAGGAGTTCTTTCTT+GGG - Chr6:96562693-96562712 MsG0680034914.01.T02:five_prime_UTR 45.0%
CTAAAGAGGAACACACTCCA+AGG + Chr6:96560464-96560483 None:intergenic 45.0%
CTCAGTTGTGCCTCTTAGAA+AGG - Chr6:96561553-96561572 MsG0680034914.01.T02:five_prime_UTR 45.0%
CTGCAGAACTCAATGGTGTA+AGG + Chr6:96562991-96563010 None:intergenic 45.0%
CTGTATTCTTCTTGAGGAGG+AGG - Chr6:96560763-96560782 MsG0680034914.01.T02:intron 45.0%
CTTACACCATTGAGTTCTGC+AGG - Chr6:96562989-96563008 MsG0680034914.01.T02:five_prime_UTR 45.0%
CTTGGAGGAGTTCTTTCTTG+GGG - Chr6:96562694-96562713 MsG0680034914.01.T02:five_prime_UTR 45.0%
CTTGGAGTGTGTTCCTCTTT+AGG - Chr6:96560462-96560481 MsG0680034914.01.T02:CDS 45.0%
GACTCTTCCTGCTTCAATAC+TGG - Chr6:96564002-96564021 MsG0680034914.01.T02:five_prime_UTR 45.0%
GGAAAAGGTTGACAAGGCTA+AGG - Chr6:96563924-96563943 MsG0680034914.01.T02:five_prime_UTR 45.0%
GGGTTTGTATAGTCAACTCC+GGG - Chr6:96563083-96563102 MsG0680034914.01.T02:five_prime_UTR 45.0%
GGTTCTATACAGCTGCTGAT+GGG - Chr6:96562358-96562377 MsG0680034914.01.T02:five_prime_UTR 45.0%
GTAAGATAACTCAGGACTCG+AGG + Chr6:96563152-96563171 None:intergenic 45.0%
GTTGCGGTACACAATTGCAT+AGG + Chr6:96563683-96563702 None:intergenic 45.0%
TAGACCATCTCCAAGGATCA+TGG + Chr6:96563028-96563047 None:intergenic 45.0%
TATTGCTGTGTTGGGCTATG+AGG + Chr6:96560724-96560743 None:intergenic 45.0%
TCCCTATGTGCAAACCATGT+AGG + Chr6:96563217-96563236 None:intergenic 45.0%
TCCTTGGAGGAGTTCTTTCT+TGG - Chr6:96562692-96562711 MsG0680034914.01.T02:five_prime_UTR 45.0%
TCTAACAGGCAATGACGTGT+TGG + Chr6:96561676-96561695 None:intergenic 45.0%
TGCAATTGTGTACCGCAACA+TGG - Chr6:96563684-96563703 MsG0680034914.01.T02:five_prime_UTR 45.0%
TGGGTCAAGACATTGGGTTT+AGG + Chr6:96560685-96560704 None:intergenic 45.0%
TTATCTTACGTGATCAGCGC+CGG - Chr6:96563163-96563182 MsG0680034914.01.T02:five_prime_UTR 45.0%
TTCTTCTCTACGTATCTCGG+CGG - Chr6:96560631-96560650 MsG0680034914.01.T02:intron 45.0%
TTGGTATCACATATCTGCCC+CGG - Chr6:96560805-96560824 MsG0680034914.01.T02:intron 45.0%
TTTGGTTGATCTAGTGGTGC+TGG - Chr6:96560427-96560446 MsG0680034914.01.T02:CDS 45.0%
! ACTAGGTTGGGTCAAGACAT+TGG + Chr6:96560692-96560711 None:intergenic 45.0%
! ATGTTGTCAATCGCGGATTG+AGG + Chr6:96561219-96561238 None:intergenic 45.0%
! ATTCTGTTGGTAAGGTAGGG+AGG - Chr6:96563806-96563825 MsG0680034914.01.T02:five_prime_UTR 45.0%
! CATTTTCTCAATCGGAGCGT+GGG - Chr6:96563408-96563427 MsG0680034914.01.T02:five_prime_UTR 45.0%
! CTAGGTTGGGTCAAGACATT+GGG + Chr6:96560691-96560710 None:intergenic 45.0%
! TGGTTCTATACAGCTGCTGA+TGG - Chr6:96562357-96562376 MsG0680034914.01.T02:five_prime_UTR 45.0%
! TTTGCTAGTTTGGCTCCTTG+AGG + Chr6:96562179-96562198 None:intergenic 45.0%
!! GAAAGGGCGTTGTTGTATTC+TGG - Chr6:96559494-96559513 MsG0680034914.01.T02:intron 45.0%
!! TTTATATTTAATTAATAGTT+TGG - Chr6:96560385-96560404 MsG0680034914.01.T02:CDS 5.0%
AACAGCTTCCACACACCTCA+AGG - Chr6:96562161-96562180 MsG0680034914.01.T02:five_prime_UTR 50.0%
ACACAATTGCATAGGGCGCA+GGG + Chr6:96563675-96563694 None:intergenic 50.0%
AGAGATGTCAACGTGACAGC+TGG - Chr6:96560562-96560581 MsG0680034914.01.T02:intron 50.0%
AGATGTCAACGTGACAGCTG+GGG - Chr6:96560564-96560583 MsG0680034914.01.T02:intron 50.0%
ATGGCGATACTCGGAGTACA+AGG - Chr6:96563703-96563722 MsG0680034914.01.T02:five_prime_UTR 50.0%
ATTCCCTCATAAGGCAACCG+GGG + Chr6:96560825-96560844 None:intergenic 50.0%
ATTCTTTGGCGCAGCGATTG+TGG - Chr6:96563768-96563787 MsG0680034914.01.T02:five_prime_UTR 50.0%
ATTGCCATAGCCATCGGAAG+TGG + Chr6:96563838-96563857 None:intergenic 50.0%
CATACCACTTCCGATGGCTA+TGG - Chr6:96563831-96563850 MsG0680034914.01.T02:five_prime_UTR 50.0%
CCACGCTCCGATTGAGAAAA+TGG + Chr6:96563410-96563429 None:intergenic 50.0%
CCCAAGAAAGAACTCCTCCA+AGG + Chr6:96562696-96562715 None:intergenic 50.0%
GAGATGTCAACGTGACAGCT+GGG - Chr6:96560563-96560582 MsG0680034914.01.T02:intron 50.0%
GAGGTTCATACCACTTCCGA+TGG - Chr6:96563825-96563844 MsG0680034914.01.T02:five_prime_UTR 50.0%
GATGTTCATCATGACTCCGC+AGG + Chr6:96563473-96563492 None:intergenic 50.0%
GCCCTTTCCCCATAAAAAGG+AGG + Chr6:96559482-96559501 None:intergenic 50.0%
TACACAATTGCATAGGGCGC+AGG + Chr6:96563676-96563695 None:intergenic 50.0%
TACCGCAACATGGCGATACT+CGG - Chr6:96563694-96563713 MsG0680034914.01.T02:five_prime_UTR 50.0%
TCAACTCCGGGACAAACGAA+GGG - Chr6:96563095-96563114 MsG0680034914.01.T02:five_prime_UTR 50.0%
TCGTGCTTGACTGTATTCGG+TGG - Chr6:96562863-96562882 MsG0680034914.01.T02:five_prime_UTR 50.0%
TGAGCAGTTGCAGTACCACT+TGG + Chr6:96562134-96562153 None:intergenic 50.0%
TGGCTCACAAACATGGATCG+CGG + Chr6:96563556-96563575 None:intergenic 50.0%
TGGTCCCTAGCATCAACCTA+TGG - Chr6:96563376-96563395 MsG0680034914.01.T02:five_prime_UTR 50.0%
TGTCTTGACCCAACCTAGTG+AGG - Chr6:96560693-96560712 MsG0680034914.01.T02:CDS 50.0%
TTGCTGTGTTGGGCTATGAG+GGG + Chr6:96560722-96560741 None:intergenic 50.0%
! CCATTTTCTCAATCGGAGCG+TGG - Chr6:96563407-96563426 MsG0680034914.01.T02:five_prime_UTR 50.0%
! GCTTGACTGTATTCGGTGGA+TGG - Chr6:96562867-96562886 MsG0680034914.01.T02:five_prime_UTR 50.0%
! TATACAGCTGCTGATGGGTG+TGG - Chr6:96562363-96562382 MsG0680034914.01.T02:five_prime_UTR 50.0%
! TTTGCACCTGCTGTTGCTTC+TGG - Chr6:96563955-96563974 MsG0680034914.01.T02:five_prime_UTR 50.0%
AGGGAGATGTGCGGCAATGT+GGG + Chr6:96563271-96563290 None:intergenic 55.0%
AGGGGGAACCTCACTAGGTT+GGG + Chr6:96560704-96560723 None:intergenic 55.0%
CAAAACCGGCTACCTTACCC+TGG - Chr6:96563525-96563544 MsG0680034914.01.T02:five_prime_UTR 55.0%
CATCTGCCCTTCGTTTGTCC+CGG + Chr6:96563104-96563123 None:intergenic 55.0%
CTATGAGGGGGAACCTCACT+AGG + Chr6:96560709-96560728 None:intergenic 55.0%
CTTGAAGGTTGCTGGGACCA+AGG + Chr6:96562768-96562787 None:intergenic 55.0%
CTTGGTCCCAGCAACCTTCA+AGG - Chr6:96562766-96562785 MsG0680034914.01.T02:five_prime_UTR 55.0%
GTCAACTCCGGGACAAACGA+AGG - Chr6:96563094-96563113 MsG0680034914.01.T02:five_prime_UTR 55.0%
TCTTCTTGAGGAGGAGGACC+CGG - Chr6:96560769-96560788 MsG0680034914.01.T02:intron 55.0%
TGCTGTGTTGGGCTATGAGG+GGG + Chr6:96560721-96560740 None:intergenic 55.0%
! CTCCGAGTATCGCCATGTTG+CGG + Chr6:96563699-96563718 None:intergenic 55.0%
! CTCTCTGGTGCCAATTTCGG+TGG - Chr6:96560498-96560517 MsG0680034914.01.T02:CDS 55.0%
! GTTTGGCTCCTTGAGGTGTG+TGG + Chr6:96562172-96562191 None:intergenic 55.0%
!! CTAGTGGTGCTGGCTTGCTT+GGG - Chr6:96560437-96560456 MsG0680034914.01.T02:CDS 55.0%
!! CTTGCTAGTCTTGCAGCCTG+CGG - Chr6:96563454-96563473 MsG0680034914.01.T02:five_prime_UTR 55.0%
!! TCTAGTGGTGCTGGCTTGCT+TGG - Chr6:96560436-96560455 MsG0680034914.01.T02:CDS 55.0%
AGGGAGAGTCTTGATCCGCC+AGG + Chr6:96563132-96563151 None:intergenic 60.0%
AGGGCAGATGCTCTACCTGG+CGG - Chr6:96563114-96563133 MsG0680034914.01.T02:five_prime_UTR 60.0%
CGAAGCCAGGGTAAGGTAGC+CGG + Chr6:96563533-96563552 None:intergenic 60.0%
CGAAGGGCAGATGCTCTACC+TGG - Chr6:96563111-96563130 MsG0680034914.01.T02:five_prime_UTR 60.0%
CTGCCCCGGTTGCCTTATGA+GGG - Chr6:96560819-96560838 MsG0680034914.01.T02:intron 60.0%
GAGGGAGATGTGCGGCAATG+TGG + Chr6:96563272-96563291 None:intergenic 60.0%
GAGGGGGAACCTCACTAGGT+TGG + Chr6:96560705-96560724 None:intergenic 60.0%
TCTGCCCCGGTTGCCTTATG+AGG - Chr6:96560818-96560837 MsG0680034914.01.T02:intron 60.0%
TGTCAACGTGACAGCTGGGG+CGG - Chr6:96560567-96560586 MsG0680034914.01.T02:intron 60.0%
TTCTCAATCGGAGCGTGGGC+TGG - Chr6:96563412-96563431 MsG0680034914.01.T02:five_prime_UTR 60.0%
!! TGCTGGCTTGCTTGGGACCT+TGG - Chr6:96560444-96560463 MsG0680034914.01.T02:CDS 60.0%
!! TGGGCTGGTGCATCACATGG+TGG - Chr6:96563427-96563446 MsG0680034914.01.T02:five_prime_UTR 60.0%
ACATGGATCGCGGCGAAGCC+AGG + Chr6:96563546-96563565 None:intergenic 65.0%
ATCGCGGCGAAGCCAGGGTA+AGG + Chr6:96563540-96563559 None:intergenic 65.0%
CATGGATCGCGGCGAAGCCA+GGG + Chr6:96563545-96563564 None:intergenic 65.0%
GTCAACGTGACAGCTGGGGC+GGG - Chr6:96560568-96560587 MsG0680034914.01.T02:intron 65.0%
TCTTGAGGAGGAGGACCCGG+CGG - Chr6:96560772-96560791 MsG0680034914.01.T02:intron 65.0%
!! GCGTGGGCTGGTGCATCACA+TGG - Chr6:96563424-96563443 MsG0680034914.01.T02:five_prime_UTR 65.0%
CTTGAGGAGGAGGACCCGGC+GGG - Chr6:96560773-96560792 MsG0680034914.01.T02:intron 70.0%
TACCAAGCCGCCTACCCCGC+CGG + Chr6:96560791-96560810 None:intergenic 70.0%
TTGAGGAGGAGGACCCGGCG+GGG - Chr6:96560774-96560793 MsG0680034914.01.T02:intron 70.0%
ACCAAGCCGCCTACCCCGCC+GGG + Chr6:96560790-96560809 None:intergenic 75.0%
! ACCCGGCGGGGTAGGCGGCT+TGG - Chr6:96560786-96560805 MsG0680034914.01.T02:intron 80.0%
! GGAGGACCCGGCGGGGTAGG+CGG - Chr6:96560781-96560800 MsG0680034914.01.T02:intron 80.0%
! GGAGGAGGACCCGGCGGGGT+AGG - Chr6:96560778-96560797 MsG0680034914.01.T02:intron 80.0%
Chromosome Type Strat End Strand Name
Chr6 gene 96558736 96564110 96558736 ID=MsG0680034914.01;Name=MsG0680034914.01
Chr6 mRNA 96558736 96564110 96558736 ID=MsG0680034914.01.T01;Parent=MsG0680034914.01;Name=MsG0680034914.01.T01;_AED=0.34;_eAED=0.38;_QI=505|0.6|0.5|1|0.6|0.66|6|0|448
Chr6 exon 96561272 96561426 96561272 ID=MsG0680034914.01.T01:exon:6939;Parent=MsG0680034914.01.T01
Chr6 exon 96563632 96564110 96563632 ID=MsG0680034914.01.T01:exon:6938;Parent=MsG0680034914.01.T01
Chr6 five_prime_UTR 96563632 96564110 96563632 ID=MsG0680034914.01.T01:five_prime_utr;Parent=MsG0680034914.01.T01
Chr6 five_prime_UTR 96561401 96561426 96561401 ID=MsG0680034914.01.T01:five_prime_utr;Parent=MsG0680034914.01.T01
Chr6 CDS 96561272 96561400 96561272 ID=MsG0680034914.01.T01:cds;Parent=MsG0680034914.01.T01
Chr6 CDS 96560648 96560745 96560648 ID=MsG0680034914.01.T01:cds;Parent=MsG0680034914.01.T01
Chr6 CDS 96560317 96560550 96560317 ID=MsG0680034914.01.T01:cds;Parent=MsG0680034914.01.T01
Chr6 CDS 96560042 96560157 96560042 ID=MsG0680034914.01.T01:cds;Parent=MsG0680034914.01.T01
Chr6 CDS 96558736 96559505 96558736 ID=MsG0680034914.01.T01:cds;Parent=MsG0680034914.01.T01
Chr6 mRNA 96558736 96564110 96558736 ID=MsG0680034914.01.T02;Parent=MsG0680034914.01;Name=MsG0680034914.01.T02;_AED=0.16;_eAED=0.18;_QI=2710|0.5|0.4|1|0.75|0.8|5|0|448
Chr6 exon 96561272 96564110 96561272 ID=MsG0680034914.01.T02:exon:6944;Parent=MsG0680034914.01.T02
Chr6 five_prime_UTR 96561401 96564110 96561401 ID=MsG0680034914.01.T02:five_prime_utr;Parent=MsG0680034914.01.T02
Chr6 CDS 96561272 96561400 96561272 ID=MsG0680034914.01.T02:cds;Parent=MsG0680034914.01.T02
Chr6 CDS 96560648 96560745 96560648 ID=MsG0680034914.01.T02:cds;Parent=MsG0680034914.01.T02
Chr6 CDS 96560317 96560550 96560317 ID=MsG0680034914.01.T02:cds;Parent=MsG0680034914.01.T02
Chr6 CDS 96560042 96560157 96560042 ID=MsG0680034914.01.T02:cds;Parent=MsG0680034914.01.T02
Chr6 CDS 96558736 96559505 96558736 ID=MsG0680034914.01.T02:cds;Parent=MsG0680034914.01.T02
Gene Sequence

>MsG0680034914.01.T02

ATGAGTGAACATGTAGCCAATCAATCCTCAGACAAAAGTGATTTTAAGGATCCTAAGTTGGGATGGATAATTGCTTTTCTCTTTGTTGTTAGCTTTTTGGGACTCTTCTCAGTTGTGCCTCTTAGAAAGATAATGGTTATTGACTTCAAATTAACCTATCCAAGTGGTACTGCAACTGCTCATCTCATCAACAGCTTCCACACACCTCAAGGAGCCAAACTAGCAAAGAAGCAAGTGAAATTGTTGGGAAAATTCTTCAGTTTCAGCTTCTTATGGGGTTTCTTTCAATGGTTCTATACAGCTGCTGATGGGTGTGGATTTCAAGCCTTCCCTTCATTAGGACTCAAAGCATATGAGAACAAGTATGTTGTCACATCTCCATTTTCAATCAAACTTGTTCATCTTGAGATGAAAATTTGCATAGTCTATACCTATATTGAAAGGGAATATCAACTTTTAGTTTCTCCTTGGAGGAGTTCTTTCTTGGGGAGTAATGTGGCTCTCATAGAACCAGAGAGGTCATTGGTACAAAAAAGGCCTTGGTCCCAGCAACCTTCAAGGAATTCAAGGTTACAGGCATTTTGCAATGCCTATGGTTGTGGACTAACAGATTGGTCCCTAGCATCAACCTATGGAAAACTAGCCATTTTCTCAATCGGAGCGTGGGCTGGTGCATCACATGGTGGAGTTCTTGCTAGTCTTGCAGCCTGCGGAGTCATGATGAACATCGTTGCGACAGCTTCTGATCTTATGCAAGATTTCAAAACCGGCTACCTTACCCTGGCTTCGCCGCGATCCATGTTTGTGAGCCAAATAATCGGCACAACAATGGGGTGTATAATATCACCTTGTGTCTTTTGGATTTTCTACAAAGCATTTCCTGACCTAGGAACACATAAAAGTCAATACCCTGCGCCCTATGCAATTGTGTACCGCAACATGGCGATACTCGGAGTACAAGGATTCAGTTCTTTACCGGATAATTGCCTCATGCTTTGTTATATATTCTTTGGCGCAGCGATTGTGGTAAACTTGATTAAGGATTCTGTTGGTAAGGTAGGGAGGTTCATACCACTTCCGATGGCTATGGCAATACCTTTCTATTTAGGACCTTATTTTGCCATTGACATGTGTGTTGGAAGTTTGATATTGTTTGTTTGGGAAAAGGTTGACAAGGCTAAGGCTGATGCTTTTGCACCTGCTGTTGCTTCTGGTTTGATATGTGGTGATGGAATATGGACTCTTCCTGCTTCAATACTGGCTCTTTTTGGAGTTAAGCCTCCCATTTGCATGAAGTTCTTGTCAAGGTCCACAAATGATAGGGTTGATACTTTCTTAGGAAATTAA

>MsG0680034914.01.T01

ATGAGTGAACATGTAGCCAATCAATCCTCAGACAAAAGTGATTTTAAGGATCCTAAGTTGGGATGGATAATTGCTTTTCTCTTTGTTGTTAGCTTTTTGGGACTCTTCTCAGTTGTGCCTCTTAGAAAGATAATGGTTATTGACTTCAAATTAACCTATCCAAGTGGTACTGCAACTGCTCATCTCATCAACAGCTTCCACACACCTCAAGGAGCCAAACTAGCAAAGAAGCAAGTGAAATTGTTGGGAAAATTCTTCAGTTTCAGCTTCTTATGGGGTTTCTTTCAATGGTTCTATACAGCTGCTGATGGGTGTGGATTTCAAGCCTTCCCTTCATTAGGACTCAAAGCATATGAGAACAAGTATGTTGTCACATCTCCATTTTCAATCAAACTTGTTCATCTTGAGATGAAAATTTGCATAGTCTATACCTATATTGAAAGGGAATATCAACTTTTAGTTTCTCCTTGGAGGAGTTCTTTCTTGGGGAGTAATGTGGCTCTCATAGAACCAGAGAGGTCATTGGTACAAAAAAGGCCTTGGTCCCAGCAACCTTCAAGGAATTCAAGGTTACAGGCATTTTGCAATGCCTATGGTTGTGGACTAACAGATTGGTCCCTAGCATCAACCTATGGAAAACTAGCCATTTTCTCAATCGGAGCGTGGGCTGGTGCATCACATGGTGGAGTTCTTGCTAGTCTTGCAGCCTGCGGAGTCATGATGAACATCGTTGCGACAGCTTCTGATCTTATGCAAGATTTCAAAACCGGCTACCTTACCCTGGCTTCGCCGCGATCCATGTTTGTGAGCCAAATAATCGGCACAACAATGGGGTGTATAATATCACCTTGTGTCTTTTGGATTTTCTACAAAGCATTTCCTGACCTAGGAACACATAAAAGTCAATACCCTGCGCCCTATGCAATTGTGTACCGCAACATGGCGATACTCGGAGTACAAGGATTCAGTTCTTTACCGGATAATTGCCTCATGCTTTGTTATATATTCTTTGGCGCAGCGATTGTGGTAAACTTGATTAAGGATTCTGTTGGTAAGGTAGGGAGGTTCATACCACTTCCGATGGCTATGGCAATACCTTTCTATTTAGGACCTTATTTTGCCATTGACATGTGTGTTGGAAGTTTGATATTGTTTGTTTGGGAAAAGGTTGACAAGGCTAAGGCTGATGCTTTTGCACCTGCTGTTGCTTCTGGTTTGATATGTGGTGATGGAATATGGACTCTTCCTGCTTCAATACTGGCTCTTTTTGGAGTTAAGCCTCCCATTTGCATGAAGTTCTTGTCAAGGTCCACAAATGATAGGGTTGATACTTTCTTAGGAAATTAA
Protein sequence

>MsG0680034914.01.T02

MSEHVANQSSDKSDFKDPKLGWIIAFLFVVSFLGLFSVVPLRKIMVIDFKLTYPSGTATAHLINSFHTPQGAKLAKKQVKLLGKFFSFSFLWGFFQWFYTAADGCGFQAFPSLGLKAYENKYVVTSPFSIKLVHLEMKICIVYTYIEREYQLLVSPWRSSFLGSNVALIEPERSLVQKRPWSQQPSRNSRLQAFCNAYGCGLTDWSLASTYGKLAIFSIGAWAGASHGGVLASLAACGVMMNIVATASDLMQDFKTGYLTLASPRSMFVSQIIGTTMGCIISPCVFWIFYKAFPDLGTHKSQYPAPYAIVYRNMAILGVQGFSSLPDNCLMLCYIFFGAAIVVNLIKDSVGKVGRFIPLPMAMAIPFYLGPYFAIDMCVGSLILFVWEKVDKAKADAFAPAVASGLICGDGIWTLPASILALFGVKPPICMKFLSRSTNDRVDTFLGN*

>MsG0680034914.01.T01

MSEHVANQSSDKSDFKDPKLGWIIAFLFVVSFLGLFSVVPLRKIMVIDFKLTYPSGTATAHLINSFHTPQGAKLAKKQVKLLGKFFSFSFLWGFFQWFYTAADGCGFQAFPSLGLKAYENKYVVTSPFSIKLVHLEMKICIVYTYIEREYQLLVSPWRSSFLGSNVALIEPERSLVQKRPWSQQPSRNSRLQAFCNAYGCGLTDWSLASTYGKLAIFSIGAWAGASHGGVLASLAACGVMMNIVATASDLMQDFKTGYLTLASPRSMFVSQIIGTTMGCIISPCVFWIFYKAFPDLGTHKSQYPAPYAIVYRNMAILGVQGFSSLPDNCLMLCYIFFGAAIVVNLIKDSVGKVGRFIPLPMAMAIPFYLGPYFAIDMCVGSLILFVWEKVDKAKADAFAPAVASGLICGDGIWTLPASILALFGVKPPICMKFLSRSTNDRVDTFLGN*