Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022593.01.T01 | GAU45338.1 | 81.29 | 310 | 31 | 2 | 1 | 310 | 8 | 290 | 0 | 513 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022593.01.T01 | Q9FGE9 | 65.58 | 276 | 82 | 1 | 32 | 307 | 142 | 404 | 3.29E-129 | 377 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000332.01 | MsG0480022593.01 | 0.808236 | 3.419409e-50 | 1.944856e-47 |
MsG0180000824.01 | MsG0480022593.01 | 0.802581 | 5.240990e-49 | 2.576632e-46 |
MsG0180000836.01 | MsG0480022593.01 | 0.810876 | 9.267762e-51 | 5.652494e-48 |
MsG0180001173.01 | MsG0480022593.01 | 0.816895 | 4.367775e-52 | 3.133848e-49 |
MsG0180001260.01 | MsG0480022593.01 | 0.812658 | 3.794467e-51 | 2.426605e-48 |
MsG0180001662.01 | MsG0480022593.01 | 0.803569 | 3.274978e-49 | 1.651393e-46 |
MsG0180001911.01 | MsG0480022593.01 | 0.815772 | 7.790640e-52 | 5.421013e-49 |
MsG0180003181.01 | MsG0480022593.01 | 0.820942 | 5.254207e-53 | 4.216133e-50 |
MsG0180003444.01 | MsG0480022593.01 | 0.806099 | 9.695857e-50 | 5.217291e-47 |
MsG0180004272.01 | MsG0480022593.01 | 0.807463 | 4.992227e-50 | 2.782515e-47 |
MsG0180004372.01 | MsG0480022593.01 | 0.800721 | 1.261815e-48 | 5.917522e-46 |
MsG0180005179.01 | MsG0480022593.01 | 0.800857 | 1.183671e-48 | 5.570615e-46 |
MsG0180005304.01 | MsG0480022593.01 | 0.809093 | 2.243764e-50 | 1.305304e-47 |
MsG0380013549.01 | MsG0480022593.01 | 0.800192 | 1.617628e-48 | 7.485048e-46 |
MsG0380013834.01 | MsG0480022593.01 | 0.812817 | 3.502803e-51 | 2.249280e-48 |
MsG0480018462.01 | MsG0480022593.01 | 0.806866 | 6.680369e-50 | 3.666062e-47 |
MsG0480020331.01 | MsG0480022593.01 | 0.818265 | 2.144755e-52 | 1.597722e-49 |
MsG0480022146.01 | MsG0480022593.01 | 0.801604 | 8.325271e-49 | 3.992320e-46 |
MsG0480022593.01 | MsG0480023873.01 | 0.801806 | 7.569203e-49 | 3.648512e-46 |
MsG0480022593.01 | MsG0580024618.01 | 0.806381 | 8.455961e-50 | 4.582953e-47 |
MsG0480022593.01 | MsG0580025184.01 | 0.821763 | 3.396490e-53 | 2.788596e-50 |
MsG0480022593.01 | MsG0580029704.01 | 0.810211 | 1.290444e-50 | 7.731818e-48 |
MsG0480022593.01 | MsG0680033392.01 | 0.800799 | 1.216213e-48 | 5.715088e-46 |
MsG0480022593.01 | MsG0680035306.01 | 0.817380 | 3.398254e-52 | 2.470923e-49 |
MsG0480022593.01 | MsG0780036810.01 | 0.803557 | 3.292753e-49 | 1.659881e-46 |
MsG0480022593.01 | MsG0780039845.01 | 0.803659 | 3.136148e-49 | 1.584926e-46 |
MsG0480022593.01 | MsG0780040926.01 | 0.805129 | 1.549680e-49 | 8.133905e-47 |
MsG0480022593.01 | MsG0880042760.01 | 0.824550 | 7.595838e-54 | 6.750170e-51 |
MsG0280006461.01 | MsG0480022593.01 | 0.804625 | 1.974179e-49 | 1.022792e-46 |
MsG0280006545.01 | MsG0480022593.01 | 0.803628 | 3.184254e-49 | 1.607971e-46 |
MsG0280009748.01 | MsG0480022593.01 | 0.833822 | 4.275803e-56 | 4.981506e-53 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022593.01.T01 | MTR_4g092830 | 88.530 | 279 | 19 | 1 | 32 | 310 | 134 | 399 | 0.0 | 507 |
MsG0480022593.01.T01 | MTR_6g016240 | 42.379 | 269 | 132 | 6 | 37 | 301 | 165 | 414 | 5.36e-68 | 218 |
MsG0480022593.01.T01 | MTR_7g094750 | 30.040 | 253 | 146 | 9 | 56 | 304 | 208 | 433 | 1.12e-24 | 103 |
MsG0480022593.01.T01 | MTR_4g126950 | 28.295 | 258 | 141 | 11 | 56 | 304 | 226 | 448 | 4.17e-24 | 102 |
MsG0480022593.01.T01 | MTR_7g109550 | 27.668 | 253 | 142 | 9 | 52 | 299 | 247 | 463 | 1.69e-23 | 100 |
MsG0480022593.01.T01 | MTR_0136s0010 | 30.049 | 203 | 105 | 7 | 112 | 304 | 335 | 510 | 3.80e-23 | 99.8 |
MsG0480022593.01.T01 | MTR_8g069790 | 28.269 | 283 | 150 | 12 | 34 | 304 | 276 | 517 | 1.54e-22 | 98.2 |
MsG0480022593.01.T01 | MTR_2g022560 | 29.880 | 251 | 148 | 9 | 56 | 304 | 214 | 438 | 5.64e-22 | 95.9 |
MsG0480022593.01.T01 | MTR_7g093450 | 30.049 | 203 | 105 | 8 | 112 | 304 | 413 | 588 | 4.60e-21 | 94.0 |
MsG0480022593.01.T01 | MTR_5g059400 | 26.744 | 258 | 147 | 9 | 56 | 304 | 292 | 516 | 4.73e-21 | 93.6 |
MsG0480022593.01.T01 | MTR_1g116130 | 26.744 | 258 | 147 | 9 | 56 | 304 | 292 | 516 | 4.73e-21 | 93.6 |
MsG0480022593.01.T01 | MTR_8g093870 | 31.500 | 200 | 99 | 9 | 111 | 303 | 304 | 472 | 1.73e-18 | 85.9 |
MsG0480022593.01.T01 | MTR_1g058380 | 26.038 | 265 | 152 | 9 | 56 | 310 | 174 | 404 | 3.06e-18 | 85.1 |
MsG0480022593.01.T01 | MTR_3g464570 | 24.111 | 253 | 150 | 9 | 56 | 299 | 49 | 268 | 2.25e-16 | 78.2 |
MsG0480022593.01.T01 | MTR_7g019120 | 24.710 | 259 | 159 | 6 | 55 | 303 | 188 | 420 | 2.51e-16 | 79.3 |
MsG0480022593.01.T01 | MTR_2g015720 | 27.570 | 214 | 120 | 7 | 90 | 299 | 172 | 354 | 4.66e-16 | 78.2 |
MsG0480022593.01.T01 | MTR_6g016880 | 23.958 | 288 | 164 | 7 | 31 | 303 | 172 | 419 | 1.23e-15 | 77.4 |
MsG0480022593.01.T01 | MTR_4g088030 | 25.379 | 264 | 155 | 8 | 42 | 304 | 129 | 351 | 1.48e-15 | 76.6 |
MsG0480022593.01.T01 | MTR_3g464570 | 24.111 | 253 | 150 | 9 | 56 | 299 | 153 | 372 | 1.71e-15 | 76.6 |
MsG0480022593.01.T01 | MTR_5g034810 | 30.366 | 191 | 103 | 7 | 112 | 299 | 185 | 348 | 7.75e-15 | 74.7 |
MsG0480022593.01.T01 | MTR_8g093530 | 25.182 | 274 | 160 | 10 | 36 | 305 | 187 | 419 | 1.14e-14 | 74.7 |
MsG0480022593.01.T01 | MTR_1g050448 | 24.510 | 306 | 176 | 12 | 9 | 303 | 114 | 375 | 2.37e-14 | 73.2 |
MsG0480022593.01.T01 | MTR_6g016875 | 24.719 | 267 | 158 | 9 | 58 | 303 | 164 | 408 | 4.88e-14 | 72.8 |
MsG0480022593.01.T01 | MTR_2g073510 | 28.111 | 217 | 125 | 9 | 90 | 303 | 165 | 353 | 5.09e-14 | 72.0 |
MsG0480022593.01.T01 | MTR_3g035830 | 28.141 | 199 | 107 | 8 | 112 | 305 | 183 | 350 | 3.68e-13 | 69.7 |
MsG0480022593.01.T01 | MTR_8g099300 | 23.509 | 285 | 177 | 10 | 33 | 306 | 168 | 422 | 5.98e-13 | 69.3 |
MsG0480022593.01.T01 | MTR_8g463790 | 25.260 | 289 | 166 | 12 | 34 | 307 | 160 | 413 | 1.27e-12 | 68.2 |
MsG0480022593.01.T01 | MTR_6g061710 | 21.631 | 282 | 174 | 9 | 39 | 303 | 263 | 514 | 2.77e-12 | 67.4 |
MsG0480022593.01.T01 | MTR_3g021090 | 27.979 | 193 | 103 | 7 | 112 | 299 | 183 | 344 | 4.46e-12 | 66.6 |
MsG0480022593.01.T01 | MTR_1g076690 | 21.304 | 230 | 146 | 6 | 91 | 303 | 359 | 570 | 7.58e-12 | 66.2 |
MsG0480022593.01.T01 | MTR_3g070900 | 24.490 | 294 | 161 | 9 | 34 | 304 | 195 | 450 | 1.48e-11 | 65.1 |
MsG0480022593.01.T01 | MTR_4g016940 | 25.455 | 275 | 153 | 12 | 47 | 303 | 187 | 427 | 2.37e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022593.01.T01 | AT5G64470 | 65.580 | 276 | 82 | 1 | 32 | 307 | 142 | 404 | 3.36e-130 | 377 |
MsG0480022593.01.T01 | AT5G64470 | 63.406 | 276 | 82 | 3 | 32 | 307 | 142 | 398 | 7.80e-122 | 355 |
MsG0480022593.01.T01 | AT5G64470 | 68.125 | 160 | 51 | 0 | 32 | 191 | 142 | 301 | 6.02e-75 | 233 |
MsG0480022593.01.T01 | AT5G64470 | 68.125 | 160 | 51 | 0 | 32 | 191 | 142 | 301 | 7.00e-75 | 233 |
MsG0480022593.01.T01 | AT2G14530 | 40.840 | 262 | 131 | 8 | 43 | 299 | 160 | 402 | 4.92e-60 | 197 |
MsG0480022593.01.T01 | AT3G12060 | 29.044 | 272 | 149 | 10 | 51 | 311 | 305 | 543 | 2.05e-27 | 112 |
MsG0480022593.01.T01 | AT5G06700 | 32.432 | 222 | 109 | 9 | 94 | 304 | 405 | 596 | 6.33e-25 | 105 |
MsG0480022593.01.T01 | AT3G06080 | 27.778 | 252 | 154 | 7 | 56 | 304 | 220 | 446 | 1.13e-24 | 103 |
MsG0480022593.01.T01 | AT5G06230 | 29.344 | 259 | 148 | 8 | 56 | 310 | 144 | 371 | 1.27e-23 | 99.8 |
MsG0480022593.01.T01 | AT5G06230 | 28.571 | 259 | 150 | 8 | 56 | 310 | 185 | 412 | 2.51e-23 | 99.8 |
MsG0480022593.01.T01 | AT5G19160 | 25.969 | 258 | 168 | 7 | 56 | 311 | 216 | 452 | 2.56e-23 | 100 |
MsG0480022593.01.T01 | AT3G62390 | 30.000 | 190 | 107 | 6 | 112 | 299 | 302 | 467 | 3.52e-22 | 96.7 |
MsG0480022593.01.T01 | AT1G60790 | 27.206 | 272 | 157 | 10 | 41 | 304 | 295 | 533 | 6.65e-22 | 96.3 |
MsG0480022593.01.T01 | AT5G20590 | 28.405 | 257 | 141 | 11 | 56 | 304 | 259 | 480 | 1.64e-21 | 95.1 |
MsG0480022593.01.T01 | AT3G11570 | 28.736 | 261 | 147 | 9 | 56 | 310 | 199 | 426 | 2.03e-21 | 94.4 |
MsG0480022593.01.T01 | AT5G20680 | 29.323 | 266 | 138 | 12 | 47 | 303 | 233 | 457 | 1.56e-20 | 92.0 |
MsG0480022593.01.T01 | AT5G20680 | 29.323 | 266 | 138 | 12 | 47 | 303 | 327 | 551 | 2.53e-20 | 91.7 |
MsG0480022593.01.T01 | AT5G20680 | 29.323 | 266 | 138 | 12 | 47 | 303 | 327 | 551 | 2.53e-20 | 91.7 |
MsG0480022593.01.T01 | AT5G20680 | 29.323 | 266 | 138 | 12 | 47 | 303 | 327 | 551 | 2.53e-20 | 91.7 |
MsG0480022593.01.T01 | AT5G20680 | 29.323 | 266 | 138 | 12 | 47 | 303 | 327 | 551 | 2.53e-20 | 91.7 |
MsG0480022593.01.T01 | AT5G20680 | 29.323 | 266 | 138 | 12 | 47 | 303 | 309 | 533 | 2.66e-20 | 91.7 |
MsG0480022593.01.T01 | AT5G64020 | 26.545 | 275 | 145 | 11 | 46 | 299 | 166 | 404 | 3.85e-16 | 79.0 |
MsG0480022593.01.T01 | AT3G54260 | 27.000 | 200 | 111 | 6 | 112 | 304 | 204 | 375 | 4.80e-15 | 75.5 |
MsG0480022593.01.T01 | AT2G31110 | 28.311 | 219 | 111 | 9 | 85 | 295 | 26 | 206 | 8.06e-15 | 72.8 |
MsG0480022593.01.T01 | AT5G58600 | 29.412 | 204 | 111 | 7 | 112 | 304 | 220 | 401 | 1.33e-14 | 74.3 |
MsG0480022593.01.T01 | AT2G31110 | 27.381 | 252 | 127 | 11 | 56 | 299 | 155 | 358 | 1.52e-14 | 73.9 |
MsG0480022593.01.T01 | AT3G02440 | 22.222 | 261 | 162 | 8 | 56 | 303 | 244 | 476 | 2.26e-13 | 70.9 |
MsG0480022593.01.T01 | AT3G02440 | 22.222 | 261 | 162 | 8 | 56 | 303 | 236 | 468 | 2.54e-13 | 70.5 |
MsG0480022593.01.T01 | AT4G23790 | 22.680 | 291 | 180 | 9 | 29 | 306 | 172 | 430 | 4.42e-13 | 69.7 |
MsG0480022593.01.T01 | AT3G14850 | 26.020 | 196 | 118 | 8 | 112 | 305 | 83 | 253 | 5.87e-13 | 68.2 |
MsG0480022593.01.T01 | AT2G40160 | 23.843 | 281 | 182 | 7 | 34 | 304 | 166 | 424 | 8.02e-13 | 68.9 |
MsG0480022593.01.T01 | AT2G37720 | 25.381 | 197 | 107 | 7 | 111 | 299 | 314 | 478 | 8.81e-13 | 68.9 |
MsG0480022593.01.T01 | AT2G40160 | 23.843 | 281 | 182 | 7 | 34 | 304 | 166 | 424 | 1.18e-12 | 68.6 |
MsG0480022593.01.T01 | AT3G14850 | 26.020 | 196 | 118 | 8 | 112 | 305 | 186 | 356 | 1.44e-12 | 67.8 |
MsG0480022593.01.T01 | AT2G38320 | 26.562 | 256 | 134 | 12 | 74 | 305 | 181 | 406 | 2.77e-12 | 67.4 |
MsG0480022593.01.T01 | AT4G11090 | 23.026 | 304 | 171 | 13 | 29 | 312 | 172 | 432 | 2.92e-12 | 67.4 |
MsG0480022593.01.T01 | AT2G38320 | 26.562 | 256 | 134 | 12 | 74 | 305 | 98 | 323 | 2.96e-12 | 66.6 |
MsG0480022593.01.T01 | AT5G01360 | 24.735 | 283 | 163 | 11 | 34 | 299 | 181 | 430 | 4.32e-12 | 67.0 |
MsG0480022593.01.T01 | AT5G01360 | 24.735 | 283 | 163 | 11 | 34 | 299 | 125 | 374 | 4.53e-12 | 66.6 |
MsG0480022593.01.T01 | AT1G73140 | 25.980 | 204 | 116 | 8 | 112 | 304 | 227 | 406 | 3.64e-11 | 63.9 |
Find 76 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGAGAATGTTACTTGTATT+TGG | 0.146325 | 4:+74466400 | None:intergenic |
GGAAAGACGCAGTTGCAATT+TGG | 0.240690 | 4:-74463706 | MsG0480022593.01.T01:CDS |
TTTGTTAACTCCGTTGTTCC+TGG | 0.241734 | 4:+74463850 | None:intergenic |
GCAACAGTAACATTAAATTT+AGG | 0.242203 | 4:+74466446 | None:intergenic |
CAACTAATCCTTGATGGTTT+TGG | 0.242992 | 4:-74463620 | MsG0480022593.01.T01:CDS |
GTGTTAGTATCCTGTTATTT+AGG | 0.249282 | 4:+74463900 | None:intergenic |
GAAAGACGCAGTTGCAATTT+GGG | 0.266598 | 4:-74463705 | MsG0480022593.01.T01:CDS |
AGACAAGAGGTTTCTCCTTT+GGG | 0.289124 | 4:+74464390 | None:intergenic |
CAGAACTTAAGTGTGTTTCT+AGG | 0.291965 | 4:+74464269 | None:intergenic |
TGTGATTGAAAAGGTATTAC+AGG | 0.302668 | 4:-74463807 | MsG0480022593.01.T01:CDS |
AAGACAAGAGGTTTCTCCTT+TGG | 0.309330 | 4:+74464389 | None:intergenic |
CAAGCATTAGCCTAAATAAC+AGG | 0.317761 | 4:-74463910 | MsG0480022593.01.T01:CDS |
CGCAGTTGCAATTTGGGGTC+AGG | 0.329487 | 4:-74463699 | MsG0480022593.01.T01:CDS |
CAGCCAAAGCAATCTGAATC+TGG | 0.332992 | 4:-74465043 | MsG0480022593.01.T01:CDS |
GCTTGATCAATTCATGGAAA+TGG | 0.337392 | 4:-74466661 | MsG0480022593.01.T01:CDS |
TTATCACAACTAATCCTTGA+TGG | 0.340010 | 4:-74463626 | MsG0480022593.01.T01:CDS |
AACCACAAATCAAGCTGTTC+AGG | 0.362875 | 4:+74463878 | None:intergenic |
TGAATCGGATCGACCCGTTT+CGG | 0.369741 | 4:-74466619 | MsG0480022593.01.T01:CDS |
CTAGAAACACACTTAAGTTC+TGG | 0.372580 | 4:-74464268 | MsG0480022593.01.T01:CDS |
CCTCCACTCGAGTTGTTAGA+TGG | 0.378409 | 4:-74464341 | MsG0480022593.01.T01:CDS |
CTCCACCATAAAAGTGCCTT+GGG | 0.386675 | 4:+74464234 | None:intergenic |
ATCTGAGCTTGATCAATTCA+TGG | 0.387366 | 4:-74466667 | MsG0480022593.01.T01:CDS |
GATGAATGGGCTAAAATTGC+AGG | 0.395954 | 4:-74464968 | MsG0480022593.01.T01:CDS |
AAAATATCAACCCATGTGTC+AGG | 0.396395 | 4:+74463647 | None:intergenic |
ATCCCAGATTCAGATTGCTT+TGG | 0.401751 | 4:+74465040 | None:intergenic |
GTCTTTCCTTCCTAGCCATA+TGG | 0.413652 | 4:+74463721 | None:intergenic |
AACTCGAGTGGAGGAACTAT+TGG | 0.414430 | 4:+74464350 | None:intergenic |
CACCTGAACAGCTTGATTTG+TGG | 0.424404 | 4:-74463880 | MsG0480022593.01.T01:CDS |
TTGTTAACTCCGTTGTTCCT+GGG | 0.451397 | 4:+74463851 | None:intergenic |
CTTGATCAATTCATGGAAAT+GGG | 0.452508 | 4:-74466660 | MsG0480022593.01.T01:CDS |
TTCCTTCCTAGCCATATGGC+TGG | 0.459338 | 4:+74463725 | None:intergenic |
TGCCGGGTGTCCCTGACACA+TGG | 0.468022 | 4:-74463658 | MsG0480022593.01.T01:CDS |
CACGTGGCTGCGATTTGAAT+CGG | 0.472001 | 4:-74466634 | MsG0480022593.01.T01:CDS |
TACTCTCAGGGTTGCTGATG+AGG | 0.474728 | 4:-74466516 | MsG0480022593.01.T01:intron |
CCGATGCTCATCCAGCCATA+TGG | 0.478920 | 4:-74463736 | MsG0480022593.01.T01:CDS |
TGGATGTTCCTGCAGATGAA+TGG | 0.491355 | 4:-74464982 | MsG0480022593.01.T01:CDS |
CTAATGCTTGAAAATGCAAA+TGG | 0.492128 | 4:+74463923 | None:intergenic |
TTGCATGCATTGGTGTCTGC+CGG | 0.494132 | 4:-74463675 | MsG0480022593.01.T01:CDS |
TCTCCACCATAAAAGTGCCT+TGG | 0.508899 | 4:+74464233 | None:intergenic |
CAGTTCTTCCAAAACCATCA+AGG | 0.516514 | 4:+74463612 | None:intergenic |
TGCATGCATTGGTGTCTGCC+GGG | 0.518881 | 4:-74463674 | MsG0480022593.01.T01:CDS |
GGGGTCAGGATTGCATGCAT+TGG | 0.522602 | 4:-74463685 | MsG0480022593.01.T01:CDS |
TTGATTTGTGGTTTGAACCC+AGG | 0.525235 | 4:-74463868 | MsG0480022593.01.T01:CDS |
GATGTCCTGCTGTTTAATAC+TGG | 0.536983 | 4:-74464938 | MsG0480022593.01.T01:CDS |
AGCCAAAGCAATCTGAATCT+GGG | 0.537638 | 4:-74465042 | MsG0480022593.01.T01:CDS |
TCTGAATCTGGGATGCAAGA+TGG | 0.543111 | 4:-74465031 | MsG0480022593.01.T01:CDS |
ACCCATGTGTCAGGGACACC+CGG | 0.546646 | 4:+74463656 | None:intergenic |
ACTCTCAGGGTTGCTGATGA+GGG | 0.547267 | 4:-74466515 | MsG0480022593.01.T01:intron |
GGATGTTCCTGCAGATGAAT+GGG | 0.547390 | 4:-74464981 | MsG0480022593.01.T01:CDS |
ATCCAGCCATATGGCTAGGA+AGG | 0.547774 | 4:-74463727 | MsG0480022593.01.T01:CDS |
ATCTGGGATGCAAGATGGAT+CGG | 0.560024 | 4:-74465026 | MsG0480022593.01.T01:CDS |
AAAGACGCAGTTGCAATTTG+GGG | 0.562952 | 4:-74463704 | MsG0480022593.01.T01:CDS |
TGCTGTTTAATACTGGTCAC+TGG | 0.567477 | 4:-74464931 | MsG0480022593.01.T01:intron |
GGTGGAGATTGGAATCAAAA+CGG | 0.569234 | 4:-74464218 | MsG0480022593.01.T01:intron |
CCTGCTTTATAAAAGACAAG+AGG | 0.571746 | 4:+74464377 | None:intergenic |
CCATATGGCTGGATGAGCAT+CGG | 0.580851 | 4:+74463736 | None:intergenic |
AGTGACCAGTATTAAACAGC+AGG | 0.581777 | 4:+74464933 | None:intergenic |
GCCGGGTGTCCCTGACACAT+GGG | 0.586061 | 4:-74463657 | MsG0480022593.01.T01:CDS |
GCTCATCCAGCCATATGGCT+AGG | 0.593255 | 4:-74463731 | MsG0480022593.01.T01:CDS |
CTGATGAGGGTGCACGAAAG+TGG | 0.605026 | 4:-74466502 | MsG0480022593.01.T01:CDS |
GTGATTGAAAAGGTATTACA+GGG | 0.613956 | 4:-74463806 | MsG0480022593.01.T01:CDS |
AAATATCAACCCATGTGTCA+GGG | 0.614800 | 4:+74463648 | None:intergenic |
CGATTCAAATCGCAGCCACG+TGG | 0.616531 | 4:+74466635 | None:intergenic |
AGTCCATCTAACAACTCGAG+TGG | 0.626074 | 4:+74464338 | None:intergenic |
TGGTTTGAACCCAGGAACAA+CGG | 0.627022 | 4:-74463860 | MsG0480022593.01.T01:CDS |
CCATCTAACAACTCGAGTGG+AGG | 0.632990 | 4:+74464341 | None:intergenic |
GGGATGCAAGATGGATCGGA+AGG | 0.639320 | 4:-74465022 | MsG0480022593.01.T01:CDS |
AGGTATTCATCGAGTTGACG+TGG | 0.640964 | 4:-74465002 | MsG0480022593.01.T01:CDS |
GGAATTGCATCAGAAACCAA+CGG | 0.659963 | 4:-74466694 | MsG0480022593.01.T01:CDS |
AATGCGTAAAATCAACCACA+TGG | 0.666633 | 4:+74463774 | None:intergenic |
TCTGGCGTTTACAATCCCCA+AGG | 0.678098 | 4:-74464250 | MsG0480022593.01.T01:CDS |
GAATCATGACAAATTCCCAA+AGG | 0.686959 | 4:-74464405 | MsG0480022593.01.T01:CDS |
TCATGGAAATGGGTCCCACG+TGG | 0.719244 | 4:-74466650 | MsG0480022593.01.T01:CDS |
TCCACCATAAAAGTGCCTTG+GGG | 0.730826 | 4:+74464235 | None:intergenic |
GATTCAAATCGCAGCCACGT+GGG | 0.747878 | 4:+74466636 | None:intergenic |
ACAGGGCACAAACATCCATG+TGG | 0.757378 | 4:-74463789 | MsG0480022593.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAGATAATAATGATTATAT+TGG | - | Chr4:74465036-74465055 | MsG0480022593.01.T01:CDS | 10.0% |
!! | ATCTAAAAAAAAATATTCTG+TGG | + | Chr4:74464878-74464897 | None:intergenic | 15.0% |
!! | TCTAAAAAAAAATATTCTGT+GGG | + | Chr4:74464877-74464896 | None:intergenic | 15.0% |
!!! | CTTATTTTAGTAAGTTTTAT+AGG | - | Chr4:74464063-74464082 | MsG0480022593.01.T01:intron | 15.0% |
!!! | TTACATTTGATGTTTTTTAA+AGG | - | Chr4:74466302-74466321 | MsG0480022593.01.T01:intron | 15.0% |
!!! | TTATTGATTTTGTCTTTAAT+AGG | - | Chr4:74465867-74465886 | MsG0480022593.01.T01:intron | 15.0% |
!! | AATTGCACTTAAAAAACAAT+TGG | + | Chr4:74464986-74465005 | None:intergenic | 20.0% |
!! | ATAAAATTAGGGAAAATAAG+AGG | + | Chr4:74466237-74466256 | None:intergenic | 20.0% |
!! | ATATGTTTATTGATGTTAGA+TGG | - | Chr4:74464936-74464955 | MsG0480022593.01.T01:CDS | 20.0% |
!! | CTAAAAAAAAATATTCTGTG+GGG | + | Chr4:74464876-74464895 | None:intergenic | 20.0% |
!! | TGATTTGAATCAATAAAAGT+AGG | - | Chr4:74465076-74465095 | MsG0480022593.01.T01:intron | 20.0% |
!! | TTATAGATATAGATCTAGTT+TGG | - | Chr4:74465634-74465653 | MsG0480022593.01.T01:intron | 20.0% |
!!! | AACTAAAACTATTTTTCAAG+TGG | + | Chr4:74465442-74465461 | None:intergenic | 20.0% |
!!! | TTATGAAAATACTAGCTTTT+AGG | - | Chr4:74464091-74464110 | MsG0480022593.01.T01:intron | 20.0% |
! | AAATCAATAATGACACAGTT+TGG | + | Chr4:74465857-74465876 | None:intergenic | 25.0% |
! | AAGTTGAATAAAGAATGCAA+TGG | + | Chr4:74464330-74464349 | None:intergenic | 25.0% |
! | AATAAGCTCTACATGTTATT+AGG | + | Chr4:74464218-74464237 | None:intergenic | 25.0% |
! | AATGGTTGACAAAAATAACA+GGG | + | Chr4:74465601-74465620 | None:intergenic | 25.0% |
! | ACTATTAGTTAAAGCTATCA+TGG | + | Chr4:74465716-74465735 | None:intergenic | 25.0% |
! | ATAAGTTCATTACAAGTCTA+TGG | + | Chr4:74465773-74465792 | None:intergenic | 25.0% |
! | CAAATATAGAAATACTGTGT+TGG | - | Chr4:74464155-74464174 | MsG0480022593.01.T01:intron | 25.0% |
! | GCAACAGTAACATTAAATTT+AGG | + | Chr4:74463854-74463873 | None:intergenic | 25.0% |
! | TAATGGTTGACAAAAATAAC+AGG | + | Chr4:74465602-74465621 | None:intergenic | 25.0% |
! | TATAAACTCAATCATCCTAA+TGG | + | Chr4:74465619-74465638 | None:intergenic | 25.0% |
! | TCATGTTTCAATGTTACAAA+TGG | - | Chr4:74464356-74464375 | MsG0480022593.01.T01:CDS | 25.0% |
! | TGAATCAATAAAAGTAGGAA+TGG | - | Chr4:74465081-74465100 | MsG0480022593.01.T01:intron | 25.0% |
! | TGATGAGAAATAAGAATGTT+GGG | - | Chr4:74463711-74463730 | MsG0480022593.01.T01:CDS | 25.0% |
! | TTGATGAGAAATAAGAATGT+TGG | - | Chr4:74463710-74463729 | MsG0480022593.01.T01:CDS | 25.0% |
!! | AATTACTGATTAAACAAAGG+TGG | - | Chr4:74465231-74465250 | MsG0480022593.01.T01:intron | 25.0% |
!! | ATGAGAATGTTACTTGTATT+TGG | + | Chr4:74463900-74463919 | None:intergenic | 25.0% |
!! | CTTGAATATTTCTCATTTTC+TGG | - | Chr4:74466325-74466344 | MsG0480022593.01.T01:intron | 25.0% |
!! | GATGAATTTTGTGATTGAAA+AGG | - | Chr4:74466481-74466500 | MsG0480022593.01.T01:CDS | 25.0% |
!! | GCTAATTACTGATTAAACAA+AGG | - | Chr4:74465228-74465247 | MsG0480022593.01.T01:intron | 25.0% |
!! | TTGATTTTGTCTTTAATAGG+TGG | - | Chr4:74465870-74465889 | MsG0480022593.01.T01:intron | 25.0% |
!!! | TAAGCTTGCTAGTTAATTTT+AGG | - | Chr4:74465572-74465591 | MsG0480022593.01.T01:intron | 25.0% |
!!! | TGTTATTTTTGTCAACCATT+AGG | - | Chr4:74465601-74465620 | MsG0480022593.01.T01:intron | 25.0% |
!!! | TTTTAAGTGCAATTTCAACA+GGG | - | Chr4:74464992-74465011 | MsG0480022593.01.T01:CDS | 25.0% |
!!! | TTTTTAAGTGCAATTTCAAC+AGG | - | Chr4:74464991-74465010 | MsG0480022593.01.T01:CDS | 25.0% |
AAAATAGGAGACACAAGAAA+AGG | + | Chr4:74465141-74465160 | None:intergenic | 30.0% | |
AAATACTGTGTTGGAAAGTT+GGG | - | Chr4:74464164-74464183 | MsG0480022593.01.T01:intron | 30.0% | |
AAATGTAAGTAAAGCCTGTT+TGG | - | Chr4:74463989-74464008 | MsG0480022593.01.T01:intron | 30.0% | |
AATAAGAATGTTGGGTTTGT+TGG | - | Chr4:74463719-74463738 | MsG0480022593.01.T01:CDS | 30.0% | |
ATTAACAAGCACCCAAAAAT+AGG | + | Chr4:74465156-74465175 | None:intergenic | 30.0% | |
ATTTATGCAAGATGTTATGC+AGG | + | Chr4:74466269-74466288 | None:intergenic | 30.0% | |
CTAATGCTTGAAAATGCAAA+TGG | + | Chr4:74466377-74466396 | None:intergenic | 30.0% | |
CTGTTTATTAATGCATGCTT+TGG | + | Chr4:74465472-74465491 | None:intergenic | 30.0% | |
CTTGATCAATTCATGGAAAT+GGG | - | Chr4:74463637-74463656 | MsG0480022593.01.T01:CDS | 30.0% | |
GGAAAATAAGAGGAAATAAG+AGG | + | Chr4:74466227-74466246 | None:intergenic | 30.0% | |
GGATTAACTTCTAAGCTTAT+AGG | + | Chr4:74465836-74465855 | None:intergenic | 30.0% | |
TAATCAGTAATTAGCACGTA+TGG | + | Chr4:74465223-74465242 | None:intergenic | 30.0% | |
TCTATGGTTGCTTATGTAAA+AGG | + | Chr4:74465757-74465776 | None:intergenic | 30.0% | |
TGTCATTATAATGAAAACCC+TGG | - | Chr4:74465508-74465527 | MsG0480022593.01.T01:intron | 30.0% | |
TTATCACAACTAATCCTTGA+TGG | - | Chr4:74466671-74466690 | MsG0480022593.01.T01:CDS | 30.0% | |
TTTCCACAAGTAATCATAGA+AGG | - | Chr4:74465664-74465683 | MsG0480022593.01.T01:intron | 30.0% | |
TTTCCTTCTATGATTACTTG+TGG | + | Chr4:74465670-74465689 | None:intergenic | 30.0% | |
! | ACTTCTTATTTCTTCTCCAT+GGG | + | Chr4:74464248-74464267 | None:intergenic | 30.0% |
! | ATAAGAATGTTGGGTTTGTT+GGG | - | Chr4:74463720-74463739 | MsG0480022593.01.T01:CDS | 30.0% |
! | ATTCTTTTCATGAAACCTGA+AGG | + | Chr4:74464539-74464558 | None:intergenic | 30.0% |
! | GTATACTAGATTTTTCTTCG+TGG | + | Chr4:74464807-74464826 | None:intergenic | 30.0% |
! | GTGTTAGTATCCTGTTATTT+AGG | + | Chr4:74466400-74466419 | None:intergenic | 30.0% |
! | TACTTCTTATTTCTTCTCCA+TGG | + | Chr4:74464249-74464268 | None:intergenic | 30.0% |
! | TTCTTTTCATGAAACCTGAA+GGG | + | Chr4:74464538-74464557 | None:intergenic | 30.0% |
! | TTTCTTGTGTCTCCTATTTT+TGG | - | Chr4:74465141-74465160 | MsG0480022593.01.T01:intron | 30.0% |
!! | GTGATTGAAAAGGTATTACA+GGG | - | Chr4:74466491-74466510 | MsG0480022593.01.T01:CDS | 30.0% |
!! | TGTGATTGAAAAGGTATTAC+AGG | - | Chr4:74466490-74466509 | MsG0480022593.01.T01:CDS | 30.0% |
!! | TTCTTGTGTCTCCTATTTTT+GGG | - | Chr4:74465142-74465161 | MsG0480022593.01.T01:intron | 30.0% |
!!! | AAAATACTAGCTTTTAGGCT+TGG | - | Chr4:74464096-74464115 | MsG0480022593.01.T01:intron | 30.0% |
!!! | AACTATTTTTCAAGTGGTAC+TGG | + | Chr4:74465436-74465455 | None:intergenic | 30.0% |
!!! | GTGATTTTTTAAGAGTTGCT+AGG | - | Chr4:74464380-74464399 | MsG0480022593.01.T01:CDS | 30.0% |
!!! | TTTTTTAAGAGTTGCTAGGT+TGG | - | Chr4:74464384-74464403 | MsG0480022593.01.T01:CDS | 30.0% |
AAAATATCAACCCATGTGTC+AGG | + | Chr4:74466653-74466672 | None:intergenic | 35.0% | |
AAATATCAACCCATGTGTCA+GGG | + | Chr4:74466652-74466671 | None:intergenic | 35.0% | |
AATAAAAGTAGGAATGGCGA+CGG | - | Chr4:74465087-74465106 | MsG0480022593.01.T01:intron | 35.0% | |
AATAAGCTGAGAACACCTTA+TGG | + | Chr4:74464049-74464068 | None:intergenic | 35.0% | |
AATACTGTGTTGGAAAGTTG+GGG | - | Chr4:74464165-74464184 | MsG0480022593.01.T01:intron | 35.0% | |
AATGCGTAAAATCAACCACA+TGG | + | Chr4:74466526-74466545 | None:intergenic | 35.0% | |
AGACACAAGAAAAGGAAACA+GGG | + | Chr4:74465133-74465152 | None:intergenic | 35.0% | |
AGACCAAGAAATTCTCATTG+AGG | + | Chr4:74463751-74463770 | None:intergenic | 35.0% | |
AGGTGCATGGCAATAAAATT+AGG | + | Chr4:74466249-74466268 | None:intergenic | 35.0% | |
ATCAAACCCAAAAACCGAAA+CGG | + | Chr4:74463695-74463714 | None:intergenic | 35.0% | |
ATCCAGAAGTTTCAAGATTG+AGG | + | Chr4:74465410-74465429 | None:intergenic | 35.0% | |
ATCTGAGCTTGATCAATTCA+TGG | - | Chr4:74463630-74463649 | MsG0480022593.01.T01:CDS | 35.0% | |
CAATAACAGACATGACCATA+AGG | - | Chr4:74464031-74464050 | MsG0480022593.01.T01:intron | 35.0% | |
CAGAACTTAAGTGTGTTTCT+AGG | + | Chr4:74466031-74466050 | None:intergenic | 35.0% | |
CCTGCTTTATAAAAGACAAG+AGG | + | Chr4:74465923-74465942 | None:intergenic | 35.0% | |
CTAGAAACACACTTAAGTTC+TGG | - | Chr4:74466029-74466048 | MsG0480022593.01.T01:intron | 35.0% | |
CTTTGAGTACTTTCTTTCCA+GGG | + | Chr4:74465528-74465547 | None:intergenic | 35.0% | |
GAAATACTGTGTTGGAAAGT+TGG | - | Chr4:74464163-74464182 | MsG0480022593.01.T01:intron | 35.0% | |
GAATCATGACAAATTCCCAA+AGG | - | Chr4:74465892-74465911 | MsG0480022593.01.T01:intron | 35.0% | |
GACCAAGAAATTCTCATTGA+GGG | + | Chr4:74463750-74463769 | None:intergenic | 35.0% | |
GCAAATGGCAAAAAACGAAA+TGG | + | Chr4:74466362-74466381 | None:intergenic | 35.0% | |
GCTTGATCAATTCATGGAAA+TGG | - | Chr4:74463636-74463655 | MsG0480022593.01.T01:CDS | 35.0% | |
GGTGCATGGCAATAAAATTA+GGG | + | Chr4:74466248-74466267 | None:intergenic | 35.0% | |
GTCTTTCTCTTGCATAAATG+CGG | - | Chr4:74464302-74464321 | MsG0480022593.01.T01:CDS | 35.0% | |
TAATACGATGCACAGAAACT+CGG | + | Chr4:74464760-74464779 | None:intergenic | 35.0% | |
TCTTTGAGTACTTTCTTTCC+AGG | + | Chr4:74465529-74465548 | None:intergenic | 35.0% | |
TGAAATAACTCCATCCAAAC+AGG | + | Chr4:74464006-74464025 | None:intergenic | 35.0% | |
TGGTCATGTCTGTTATTGTA+AGG | + | Chr4:74464029-74464048 | None:intergenic | 35.0% | |
TTCCCTCAATGAGAATTTCT+TGG | - | Chr4:74463745-74463764 | MsG0480022593.01.T01:CDS | 35.0% | |
TTCCTCAATCTTGAAACTTC+TGG | - | Chr4:74465405-74465424 | MsG0480022593.01.T01:intron | 35.0% | |
TTCCTTAACCAATGTCCTAA+GGG | + | Chr4:74464134-74464153 | None:intergenic | 35.0% | |
TTTCCTTAACCAATGTCCTA+AGG | + | Chr4:74464135-74464154 | None:intergenic | 35.0% | |
! | ACAATTGGCATTGAAACCAA+AGG | + | Chr4:74464971-74464990 | None:intergenic | 35.0% |
! | CAAGCATTAGCCTAAATAAC+AGG | - | Chr4:74466387-74466406 | MsG0480022593.01.T01:intron | 35.0% |
! | CCTCTTGTCTTTTATAAAGC+AGG | - | Chr4:74465920-74465939 | MsG0480022593.01.T01:intron | 35.0% |
! | TAGATGGCATCTTTTTCCTT+TGG | - | Chr4:74464952-74464971 | MsG0480022593.01.T01:CDS | 35.0% |
!! | CAACTAATCCTTGATGGTTT+TGG | - | Chr4:74466677-74466696 | MsG0480022593.01.T01:CDS | 35.0% |
!! | GCTTGCTAGTTAATTTTAGG+TGG | - | Chr4:74465575-74465594 | MsG0480022593.01.T01:intron | 35.0% |
!! | TAAGAATGTTGGGTTTGTTG+GGG | - | Chr4:74463721-74463740 | MsG0480022593.01.T01:CDS | 35.0% |
AAAGACGCAGTTGCAATTTG+GGG | - | Chr4:74466593-74466612 | MsG0480022593.01.T01:intron | 40.0% | |
AACCACAAATCAAGCTGTTC+AGG | + | Chr4:74466422-74466441 | None:intergenic | 40.0% | |
AAGACAAGAGGTTTCTCCTT+TGG | + | Chr4:74465911-74465930 | None:intergenic | 40.0% | |
AATACGATGCACAGAAACTC+GGG | + | Chr4:74464759-74464778 | None:intergenic | 40.0% | |
AATATTCTGTGGGGAGAAAG+CGG | + | Chr4:74464867-74464886 | None:intergenic | 40.0% | |
ACAAGAAAAGGAAACAGGGA+TGG | + | Chr4:74465129-74465148 | None:intergenic | 40.0% | |
AGACAAGAGGTTTCTCCTTT+GGG | + | Chr4:74465910-74465929 | None:intergenic | 40.0% | |
AGCCAAAGCAATCTGAATCT+GGG | - | Chr4:74465255-74465274 | MsG0480022593.01.T01:intron | 40.0% | |
AGTGACCAGTATTAAACAGC+AGG | + | Chr4:74465367-74465386 | None:intergenic | 40.0% | |
ATACTGTGTTGGAAAGTTGG+GGG | - | Chr4:74464166-74464185 | MsG0480022593.01.T01:intron | 40.0% | |
ATCCCAGATTCAGATTGCTT+TGG | + | Chr4:74465260-74465279 | None:intergenic | 40.0% | |
CAACTCCATAGCAGAAGTTT+GGG | + | Chr4:74466194-74466213 | None:intergenic | 40.0% | |
CAGTAATTAGCACGTATGGT+TGG | + | Chr4:74465219-74465238 | None:intergenic | 40.0% | |
CAGTTCTTCCAAAACCATCA+AGG | + | Chr4:74466688-74466707 | None:intergenic | 40.0% | |
CTCTTTCTTGTGTACTCTCA+GGG | - | Chr4:74463769-74463788 | MsG0480022593.01.T01:CDS | 40.0% | |
CTTATTCAACAAGCCACTTG+AGG | - | Chr4:74466108-74466127 | MsG0480022593.01.T01:intron | 40.0% | |
GAAAGACGCAGTTGCAATTT+GGG | - | Chr4:74466592-74466611 | MsG0480022593.01.T01:intron | 40.0% | |
GAGACACAAGAAAAGGAAAC+AGG | + | Chr4:74465134-74465153 | None:intergenic | 40.0% | |
GCACGAAAGTGGAAAAAGAA+AGG | - | Chr4:74463806-74463825 | MsG0480022593.01.T01:CDS | 40.0% | |
GGAATTGCATCAGAAACCAA+CGG | - | Chr4:74463603-74463622 | MsG0480022593.01.T01:CDS | 40.0% | |
GGTGGAGATTGGAATCAAAA+CGG | - | Chr4:74466079-74466098 | MsG0480022593.01.T01:intron | 40.0% | |
GTAAGTAAAGCCTGTTTGGA+TGG | - | Chr4:74463993-74464012 | MsG0480022593.01.T01:intron | 40.0% | |
GTGAATATGTGATGTGTACG+CGG | - | Chr4:74464447-74464466 | MsG0480022593.01.T01:intron | 40.0% | |
TCAAACCCAAAAACCGAAAC+GGG | + | Chr4:74463694-74463713 | None:intergenic | 40.0% | |
TCTCTTTCTTGTGTACTCTC+AGG | - | Chr4:74463768-74463787 | MsG0480022593.01.T01:CDS | 40.0% | |
TGCATGTCTTAAGGACTTGT+TGG | + | Chr4:74464665-74464684 | None:intergenic | 40.0% | |
TTACCAAGAGGTAGCTTAAG+TGG | + | Chr4:74464478-74464497 | None:intergenic | 40.0% | |
TTAGGCAAAACATCTCCCAT+TGG | + | Chr4:74464200-74464219 | None:intergenic | 40.0% | |
TTGGGGGTTTGAATACCAAT+GGG | - | Chr4:74464182-74464201 | MsG0480022593.01.T01:intron | 40.0% | |
TTGTTAACTCCGTTGTTCCT+GGG | + | Chr4:74466449-74466468 | None:intergenic | 40.0% | |
TTTGTTAACTCCGTTGTTCC+TGG | + | Chr4:74466450-74466469 | None:intergenic | 40.0% | |
! | GATGTCCTGCTGTTTAATAC+TGG | - | Chr4:74465359-74465378 | MsG0480022593.01.T01:intron | 40.0% |
! | GCATGTCTTAAGGACTTGTT+GGG | + | Chr4:74464664-74464683 | None:intergenic | 40.0% |
! | TGCTGTTTAATACTGGTCAC+TGG | - | Chr4:74465366-74465385 | MsG0480022593.01.T01:intron | 40.0% |
!! | AAAAAGAAAGGTGCTTGGAG+GGG | - | Chr4:74463818-74463837 | MsG0480022593.01.T01:CDS | 40.0% |
!! | AGTGGAAAAAGAAAGGTGCT+TGG | - | Chr4:74463813-74463832 | MsG0480022593.01.T01:CDS | 40.0% |
!! | ATTTTAGCCCATTCATCTGC+AGG | + | Chr4:74465326-74465345 | None:intergenic | 40.0% |
!! | GAAAAAGAAAGGTGCTTGGA+GGG | - | Chr4:74463817-74463836 | MsG0480022593.01.T01:CDS | 40.0% |
!! | GATGAATGGGCTAAAATTGC+AGG | - | Chr4:74465329-74465348 | MsG0480022593.01.T01:intron | 40.0% |
!! | TTGATTTGTGGTTTGAACCC+AGG | - | Chr4:74466429-74466448 | MsG0480022593.01.T01:CDS | 40.0% |
!!! | CTTGATGGTTTTGGAAGAAC+TGG | - | Chr4:74466686-74466705 | MsG0480022593.01.T01:CDS | 40.0% |
AACTCGAGTGGAGGAACTAT+TGG | + | Chr4:74465950-74465969 | None:intergenic | 45.0% | |
AATATGTGATGTGTACGCGG+AGG | - | Chr4:74464450-74464469 | MsG0480022593.01.T01:intron | 45.0% | |
AGTCCATCTAACAACTCGAG+TGG | + | Chr4:74465962-74465981 | None:intergenic | 45.0% | |
ATATGTGATGTGTACGCGGA+GGG | - | Chr4:74464451-74464470 | MsG0480022593.01.T01:intron | 45.0% | |
CAAGATGTTATGCAGGTGCA+TGG | + | Chr4:74466262-74466281 | None:intergenic | 45.0% | |
CAGCCAAAGCAATCTGAATC+TGG | - | Chr4:74465254-74465273 | MsG0480022593.01.T01:intron | 45.0% | |
GAGCTTATTAGCTACTCCCA+TGG | - | Chr4:74464229-74464248 | MsG0480022593.01.T01:CDS | 45.0% | |
GCAACTCCATAGCAGAAGTT+TGG | + | Chr4:74466195-74466214 | None:intergenic | 45.0% | |
GCATATGATATGCCTGCTTC+AGG | - | Chr4:74464698-74464717 | MsG0480022593.01.T01:intron | 45.0% | |
GCATCTGCATGCATGTCTTA+AGG | + | Chr4:74464674-74464693 | None:intergenic | 45.0% | |
GGAAAGACGCAGTTGCAATT+TGG | - | Chr4:74466591-74466610 | MsG0480022593.01.T01:intron | 45.0% | |
GGATGTTCCTGCAGATGAAT+GGG | - | Chr4:74465316-74465335 | MsG0480022593.01.T01:intron | 45.0% | |
GTCTTTCCTTCCTAGCCATA+TGG | + | Chr4:74466579-74466598 | None:intergenic | 45.0% | |
GTTGGGGGTTTGAATACCAA+TGG | - | Chr4:74464181-74464200 | MsG0480022593.01.T01:intron | 45.0% | |
TCCATAGCAGAAGTTTGGGT+GGG | + | Chr4:74466190-74466209 | None:intergenic | 45.0% | |
TGGAAAATGTGAGTGCCCTT+AGG | - | Chr4:74464116-74464135 | MsG0480022593.01.T01:intron | 45.0% | |
TGGATGTTCCTGCAGATGAA+TGG | - | Chr4:74465315-74465334 | MsG0480022593.01.T01:intron | 45.0% | |
TGGTTTGAACCCAGGAACAA+CGG | - | Chr4:74466437-74466456 | MsG0480022593.01.T01:CDS | 45.0% | |
! | ACTTGTTAGCATGACCCTTC+AGG | - | Chr4:74464521-74464540 | MsG0480022593.01.T01:intron | 45.0% |
! | ATCGACCCGTTTCGGTTTTT+GGG | - | Chr4:74463686-74463705 | MsG0480022593.01.T01:CDS | 45.0% |
! | ATCTGGGATGCAAGATGGAT+CGG | - | Chr4:74465271-74465290 | MsG0480022593.01.T01:intron | 45.0% |
! | CACCTGAACAGCTTGATTTG+TGG | - | Chr4:74466417-74466436 | MsG0480022593.01.T01:CDS | 45.0% |
! | TCAAGCTCAGATTTTGCCGT+TGG | + | Chr4:74463622-74463641 | None:intergenic | 45.0% |
! | TCTGAATCTGGGATGCAAGA+TGG | - | Chr4:74465266-74465285 | MsG0480022593.01.T01:intron | 45.0% |
! | TGCCCTTAGGACATTGGTTA+AGG | - | Chr4:74464129-74464148 | MsG0480022593.01.T01:intron | 45.0% |
!! | AGGTATTCATCGAGTTGACG+TGG | - | Chr4:74465295-74465314 | MsG0480022593.01.T01:intron | 45.0% |
!! | CAATCCCCAAGGCACTTTTA+TGG | - | Chr4:74466058-74466077 | MsG0480022593.01.T01:intron | 45.0% |
!! | CTCCACCATAAAAGTGCCTT+GGG | + | Chr4:74466066-74466085 | None:intergenic | 45.0% |
!! | GGAAAAAGAAAGGTGCTTGG+AGG | - | Chr4:74463816-74463835 | MsG0480022593.01.T01:CDS | 45.0% |
!! | GGCACTTTTATGGTGGAGAT+TGG | - | Chr4:74466068-74466087 | MsG0480022593.01.T01:intron | 45.0% |
!! | TCCACCATAAAAGTGCCTTG+GGG | + | Chr4:74466065-74466084 | None:intergenic | 45.0% |
!! | TCTCCACCATAAAAGTGCCT+TGG | + | Chr4:74466067-74466086 | None:intergenic | 45.0% |
ACAGGGCACAAACATCCATG+TGG | - | Chr4:74466508-74466527 | MsG0480022593.01.T01:CDS | 50.0% | |
ACTCTCAGGGTTGCTGATGA+GGG | - | Chr4:74463782-74463801 | MsG0480022593.01.T01:CDS | 50.0% | |
ATAGCAGAAGTTTGGGTGGG+AGG | + | Chr4:74466187-74466206 | None:intergenic | 50.0% | |
ATCCAGCCATATGGCTAGGA+AGG | - | Chr4:74466570-74466589 | MsG0480022593.01.T01:intron | 50.0% | |
CAAGCCACTTGAGGAGAATG+AGG | - | Chr4:74466117-74466136 | MsG0480022593.01.T01:intron | 50.0% | |
CACGTGGCTGCGATTTGAAT+CGG | - | Chr4:74463663-74463682 | MsG0480022593.01.T01:CDS | 50.0% | |
CCAATGGTGCTCTTACCAAG+AGG | + | Chr4:74464490-74464509 | None:intergenic | 50.0% | |
CCATATGGCTGGATGAGCAT+CGG | + | Chr4:74466564-74466583 | None:intergenic | 50.0% | |
CCATCTAACAACTCGAGTGG+AGG | + | Chr4:74465959-74465978 | None:intergenic | 50.0% | |
CTCCATAGCAGAAGTTTGGG+TGG | + | Chr4:74466191-74466210 | None:intergenic | 50.0% | |
GATTCAAATCGCAGCCACGT+GGG | + | Chr4:74463664-74463683 | None:intergenic | 50.0% | |
GGACCACTTAAGCTACCTCT+TGG | - | Chr4:74464472-74464491 | MsG0480022593.01.T01:intron | 50.0% | |
TACTCTCAGGGTTGCTGATG+AGG | - | Chr4:74463781-74463800 | MsG0480022593.01.T01:CDS | 50.0% | |
TCCCACCCAAACTTCTGCTA+TGG | - | Chr4:74466186-74466205 | MsG0480022593.01.T01:intron | 50.0% | |
TCTGGCGTTTACAATCCCCA+AGG | - | Chr4:74466047-74466066 | MsG0480022593.01.T01:intron | 50.0% | |
TGAATCGGATCGACCCGTTT+CGG | - | Chr4:74463678-74463697 | MsG0480022593.01.T01:CDS | 50.0% | |
TGTGAGTGCCCTTAGGACAT+TGG | - | Chr4:74464123-74464142 | MsG0480022593.01.T01:intron | 50.0% | |
TTCCTTCCTAGCCATATGGC+TGG | + | Chr4:74466575-74466594 | None:intergenic | 50.0% | |
! | AGAGCACCATTGGAGATGCT+GGG | - | Chr4:74464497-74464516 | MsG0480022593.01.T01:intron | 50.0% |
! | CCTCCACTCGAGTTGTTAGA+TGG | - | Chr4:74465956-74465975 | MsG0480022593.01.T01:intron | 50.0% |
! | GATCGACCCGTTTCGGTTTT+TGG | - | Chr4:74463685-74463704 | MsG0480022593.01.T01:CDS | 50.0% |
! | TTGCATGCATTGGTGTCTGC+CGG | - | Chr4:74466622-74466641 | MsG0480022593.01.T01:CDS | 50.0% |
!! | AAGAGCACCATTGGAGATGC+TGG | - | Chr4:74464496-74464515 | MsG0480022593.01.T01:intron | 50.0% |
!! | CCTCTTGGTAAGAGCACCAT+TGG | - | Chr4:74464487-74464506 | MsG0480022593.01.T01:intron | 50.0% |
!! | TCCCCAAGGCACTTTTATGG+TGG | - | Chr4:74466061-74466080 | MsG0480022593.01.T01:intron | 50.0% |
CAAGTGCCCAGCATCTCCAA+TGG | + | Chr4:74464506-74464525 | None:intergenic | 55.0% | |
CAGATTGCAGAGCCTGAAGC+AGG | + | Chr4:74464713-74464732 | None:intergenic | 55.0% | |
CCGATGCTCATCCAGCCATA+TGG | - | Chr4:74466561-74466580 | MsG0480022593.01.T01:intron | 55.0% | |
CGATTCAAATCGCAGCCACG+TGG | + | Chr4:74463665-74463684 | None:intergenic | 55.0% | |
CGCACCTCATTCTCCTCAAG+TGG | + | Chr4:74466124-74466143 | None:intergenic | 55.0% | |
GCTCATCCAGCCATATGGCT+AGG | - | Chr4:74466566-74466585 | MsG0480022593.01.T01:intron | 55.0% | |
GGGATGCAAGATGGATCGGA+AGG | - | Chr4:74465275-74465294 | MsG0480022593.01.T01:intron | 55.0% | |
GGGGTCAGGATTGCATGCAT+TGG | - | Chr4:74466612-74466631 | MsG0480022593.01.T01:CDS | 55.0% | |
TCATGGAAATGGGTCCCACG+TGG | - | Chr4:74463647-74463666 | MsG0480022593.01.T01:CDS | 55.0% | |
! | CGCAGTTGCAATTTGGGGTC+AGG | - | Chr4:74466598-74466617 | MsG0480022593.01.T01:intron | 55.0% |
! | CTGATGAGGGTGCACGAAAG+TGG | - | Chr4:74463795-74463814 | MsG0480022593.01.T01:CDS | 55.0% |
! | TGCATGCATTGGTGTCTGCC+GGG | - | Chr4:74466623-74466642 | MsG0480022593.01.T01:CDS | 55.0% |
ACCCATGTGTCAGGGACACC+CGG | + | Chr4:74466644-74466663 | None:intergenic | 60.0% | |
GCCGGGTGTCCCTGACACAT+GGG | - | Chr4:74466640-74466659 | MsG0480022593.01.T01:CDS | 65.0% | |
TGCCGGGTGTCCCTGACACA+TGG | - | Chr4:74466639-74466658 | MsG0480022593.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 74463601 | 74466718 | 74463601 | ID=MsG0480022593.01;Name=MsG0480022593.01 |
Chr4 | mRNA | 74463601 | 74466718 | 74463601 | ID=MsG0480022593.01.T01;Parent=MsG0480022593.01;Name=MsG0480022593.01.T01;_AED=0.38;_eAED=0.42;_QI=0|0.5|0.2|1|1|1|5|0|313 |
Chr4 | exon | 74466612 | 74466718 | 74466612 | ID=MsG0480022593.01.T01:exon:3101;Parent=MsG0480022593.01.T01 |
Chr4 | exon | 74466413 | 74466529 | 74466413 | ID=MsG0480022593.01.T01:exon:3100;Parent=MsG0480022593.01.T01 |
Chr4 | exon | 74464932 | 74465069 | 74464932 | ID=MsG0480022593.01.T01:exon:3099;Parent=MsG0480022593.01.T01 |
Chr4 | exon | 74464219 | 74464430 | 74464219 | ID=MsG0480022593.01.T01:exon:3098;Parent=MsG0480022593.01.T01 |
Chr4 | exon | 74463601 | 74463968 | 74463601 | ID=MsG0480022593.01.T01:exon:3097;Parent=MsG0480022593.01.T01 |
Chr4 | CDS | 74466612 | 74466718 | 74466612 | ID=MsG0480022593.01.T01:cds;Parent=MsG0480022593.01.T01 |
Chr4 | CDS | 74466413 | 74466529 | 74466413 | ID=MsG0480022593.01.T01:cds;Parent=MsG0480022593.01.T01 |
Chr4 | CDS | 74464932 | 74465069 | 74464932 | ID=MsG0480022593.01.T01:cds;Parent=MsG0480022593.01.T01 |
Chr4 | CDS | 74464219 | 74464430 | 74464219 | ID=MsG0480022593.01.T01:cds;Parent=MsG0480022593.01.T01 |
Chr4 | CDS | 74463601 | 74463968 | 74463601 | ID=MsG0480022593.01.T01:cds;Parent=MsG0480022593.01.T01 |
Gene Sequence |
Protein sequence |