AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001662.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001662.01.T01 MTR_1g040705 75.085 586 42 5 1 490 13 590 0.0 849
MsG0180001662.01.T01 MTR_1g040705 74.474 380 26 4 174 490 319 690 0.0 539
MsG0180001662.01.T01 MTR_1g040705 65.860 372 77 5 1 337 13 369 9.52e-156 461
MsG0180001662.01.T01 MTR_5g042450 75.000 380 24 4 174 490 308 679 0.0 538
MsG0180001662.01.T01 MTR_5g042450 66.129 372 76 5 1 337 2 358 1.21e-156 462
MsG0180001662.01.T01 MTR_1g040705 74.474 380 26 4 174 490 308 679 0.0 538
MsG0180001662.01.T01 MTR_1g040705 65.860 372 77 5 1 337 2 358 9.90e-156 460
MsG0180001662.01.T01 MTR_2g021850 56.623 385 102 5 163 490 81 457 1.33e-136 404
MsG0180001662.01.T01 MTR_2g021850 65.385 52 18 0 1 52 14 65 4.66e-13 71.6
MsG0180001662.01.T01 MTR_2g022040 56.932 339 77 4 215 490 69 401 1.10e-115 348
MsG0180001662.01.T01 MTR_6g091880 35.602 382 178 10 160 490 59 423 8.12e-59 201
MsG0180001662.01.T01 MTR_4g086270 34.152 407 187 10 141 490 160 542 1.38e-58 204
MsG0180001662.01.T01 MTR_6g034150 33.418 395 182 10 160 490 51 428 8.69e-56 193
MsG0180001662.01.T01 MTR_6g092170 33.149 362 195 7 160 488 59 406 1.59e-51 182
MsG0180001662.01.T01 MTR_6g092220 35.714 364 171 13 160 490 59 392 4.48e-48 172
MsG0180001662.01.T01 MTR_7g037430 32.464 345 155 7 219 488 586 927 7.37e-45 169
MsG0180001662.01.T01 MTR_8g106950 30.117 342 167 4 220 489 401 742 9.88e-45 168
MsG0180001662.01.T01 MTR_1g012380 30.026 383 188 6 180 490 203 577 4.18e-44 164
MsG0180001662.01.T01 MTR_8g107740 29.134 381 190 5 182 490 390 762 9.31e-43 162
MsG0180001662.01.T01 MTR_8g063290 32.948 346 155 7 219 490 294 636 2.68e-42 160
MsG0180001662.01.T01 MTR_5g040920 30.348 402 187 11 174 490 170 563 2.23e-41 157
MsG0180001662.01.T01 MTR_7g106930 34.828 290 144 5 246 490 145 434 2.72e-41 155
MsG0180001662.01.T01 MTR_7g074040 28.052 385 200 6 183 490 300 684 5.47e-41 157
MsG0180001662.01.T01 MTR_4g031160 32.622 328 149 5 235 490 489 816 6.03e-41 157
MsG0180001662.01.T01 MTR_1g103660 31.746 315 165 5 219 490 354 661 2.82e-40 155
MsG0180001662.01.T01 MTR_0013s0120 31.909 351 157 7 217 490 190 535 2.94e-40 153
MsG0180001662.01.T01 MTR_7g076350 31.395 344 160 7 219 488 321 662 6.77e-40 154
MsG0180001662.01.T01 MTR_5g088310 29.191 346 171 3 219 490 316 661 5.13e-39 151
MsG0180001662.01.T01 MTR_3g105370 29.070 344 172 5 219 490 607 950 1.00e-38 151
MsG0180001662.01.T01 MTR_1g059720 29.598 348 164 7 219 489 207 550 4.59e-38 147
MsG0180001662.01.T01 MTR_2g018870 29.457 387 191 8 177 490 213 590 5.54e-38 147
MsG0180001662.01.T01 MTR_3g052720 28.460 383 194 6 180 490 415 789 5.97e-38 149
MsG0180001662.01.T01 MTR_7g076020 29.155 367 185 7 197 489 419 784 7.29e-38 148
MsG0180001662.01.T01 MTR_5g095690 29.070 344 172 5 219 490 445 788 2.63e-37 147
MsG0180001662.01.T01 MTR_1g059280 31.437 334 155 7 233 492 78 411 3.22e-37 142
MsG0180001662.01.T01 MTR_4g130500 29.343 426 194 12 160 489 345 759 3.24e-37 146
MsG0180001662.01.T01 MTR_8g106910 31.613 310 140 5 252 489 401 710 3.70e-37 146
MsG0180001662.01.T01 MTR_8g105720 32.166 314 164 7 219 490 372 678 4.59e-37 145
MsG0180001662.01.T01 MTR_2g035620 29.830 352 169 7 217 490 513 864 6.56e-37 145
MsG0180001662.01.T01 MTR_2g094430 31.329 316 131 5 254 490 347 655 1.18e-36 144
MsG0180001662.01.T01 MTR_4g099480 30.702 342 161 7 223 490 272 611 1.28e-36 144
MsG0180001662.01.T01 MTR_1g059280 31.737 334 154 8 233 492 262 595 2.91e-36 142
MsG0180001662.01.T01 MTR_1g071240 28.771 358 182 7 205 489 545 902 4.98e-36 143
MsG0180001662.01.T01 MTR_7g092100 29.942 344 167 7 219 489 230 572 6.52e-36 141
MsG0180001662.01.T01 MTR_6g075280 27.907 344 176 5 219 490 241 584 7.01e-36 142
MsG0180001662.01.T01 MTR_1g007610 32.107 299 150 7 239 490 353 645 1.77e-35 140
MsG0180001662.01.T01 MTR_4g085110 30.769 390 208 12 149 490 416 791 2.00e-35 141
MsG0180001662.01.T01 MTR_3g011950 29.429 333 161 5 231 490 456 787 3.49e-35 140
MsG0180001662.01.T01 MTR_1g103840 30.769 338 161 7 226 490 422 759 8.31e-35 139
MsG0180001662.01.T01 MTR_5g027980 27.616 344 177 5 219 490 80 423 4.58e-34 134
MsG0180001662.01.T01 MTR_3g029530 27.119 354 184 6 211 490 749 1102 7.50e-34 137
MsG0180001662.01.T01 MTR_1g111020 27.793 367 192 7 197 490 471 837 8.87e-34 136
MsG0180001662.01.T01 MTR_5g044260 28.109 402 183 11 177 490 159 542 9.02e-34 135
MsG0180001662.01.T01 MTR_3g011940 29.091 330 161 5 233 490 441 769 1.29e-33 135
MsG0180001662.01.T01 MTR_2g042550 30.000 370 184 7 196 490 348 717 1.30e-33 135
MsG0180001662.01.T01 MTR_1g111020 27.793 367 192 7 197 490 471 837 1.37e-33 135
MsG0180001662.01.T01 MTR_4g113830 28.161 348 176 7 217 490 368 715 1.40e-33 135
MsG0180001662.01.T01 MTR_6g460480 31.544 298 161 6 235 489 118 415 1.80e-33 132
MsG0180001662.01.T01 MTR_1g073300 29.738 343 169 7 220 490 430 772 3.78e-33 134
MsG0180001662.01.T01 MTR_7g023780 29.825 342 163 7 223 490 358 696 5.46e-33 134
MsG0180001662.01.T01 MTR_3g084440 30.547 311 144 7 252 490 283 593 5.66e-33 133
MsG0180001662.01.T01 MTR_2g086150 27.829 327 164 4 230 484 512 838 7.74e-33 133
MsG0180001662.01.T01 MTR_8g088300 29.446 343 170 8 220 490 335 677 8.02e-33 133
MsG0180001662.01.T01 MTR_4g094502 27.561 410 196 9 177 489 224 629 9.43e-33 132
MsG0180001662.01.T01 MTR_1g040635 28.165 387 194 9 180 490 336 714 1.96e-32 132
MsG0180001662.01.T01 MTR_6g060510 31.776 321 156 10 219 489 287 594 2.92e-32 132
MsG0180001662.01.T01 MTR_8g086040 30.128 312 145 6 252 490 282 593 7.56e-32 129
MsG0180001662.01.T01 MTR_7g089260 28.116 345 196 8 190 490 439 775 9.70e-32 130
MsG0180001662.01.T01 MTR_5g008600 28.116 345 174 6 219 490 303 646 1.29e-31 130
MsG0180001662.01.T01 MTR_7g083820 30.000 310 169 6 222 490 347 649 1.89e-31 129
MsG0180001662.01.T01 MTR_7g016960 27.326 344 178 6 219 490 288 631 2.58e-31 128
MsG0180001662.01.T01 MTR_4g113240 28.324 346 173 5 219 490 650 994 3.20e-31 129
MsG0180001662.01.T01 MTR_4g095065 26.149 348 182 5 217 489 255 602 3.45e-31 127
MsG0180001662.01.T01 MTR_2g101710 29.747 316 171 6 217 490 291 597 4.27e-31 127
MsG0180001662.01.T01 MTR_3g098280 28.496 379 187 11 188 490 161 531 4.43e-31 127
MsG0180001662.01.T01 MTR_8g065730 28.902 346 170 7 219 490 382 725 1.43e-30 126
MsG0180001662.01.T01 MTR_2g436470 28.533 368 193 7 193 490 113 480 1.58e-30 124
MsG0180001662.01.T01 MTR_7g103230 27.746 346 176 5 219 490 507 852 2.66e-30 126
MsG0180001662.01.T01 MTR_8g069550 28.902 346 170 7 219 490 391 734 2.88e-30 125
MsG0180001662.01.T01 MTR_3g434800 28.693 352 168 8 219 490 353 701 8.54e-30 124
MsG0180001662.01.T01 MTR_5g006570 27.941 340 173 7 223 490 476 815 9.28e-30 124
MsG0180001662.01.T01 MTR_4g011570 27.168 346 178 7 219 492 508 851 8.28e-29 121
MsG0180001662.01.T01 MTR_6g032915 28.344 314 177 7 217 489 730 1036 2.77e-28 120
MsG0180001662.01.T01 MTR_0493s0010 27.410 332 172 9 219 486 258 584 3.11e-28 119
MsG0180001662.01.T01 MTR_6g060470 31.849 292 166 8 217 489 102 379 4.20e-28 116
MsG0180001662.01.T01 MTR_5g006420 27.671 365 187 7 194 484 336 697 4.32e-28 119
MsG0180001662.01.T01 MTR_2g082550 29.630 297 166 8 219 487 289 570 6.39e-28 118
MsG0180001662.01.T01 MTR_3g117150 25.691 362 191 6 205 490 189 548 1.11e-27 117
MsG0180001662.01.T01 MTR_4g094645 26.901 342 178 5 217 486 290 631 1.87e-27 117
MsG0180001662.01.T01 MTR_4g086490 24.728 368 201 6 197 490 756 1121 7.96e-27 115
MsG0180001662.01.T01 MTR_7g079860 25.989 354 190 6 209 490 379 732 1.73e-26 114
MsG0180001662.01.T01 MTR_3g027990 29.630 297 153 8 237 484 305 594 2.64e-26 113
MsG0180001662.01.T01 MTR_4g094658 27.193 342 177 5 217 486 309 650 3.07e-26 113
MsG0180001662.01.T01 MTR_7g011030 26.032 315 161 4 247 489 362 676 3.97e-26 112
MsG0180001662.01.T01 MTR_5g008260 29.825 285 154 8 250 490 469 751 5.05e-26 112
MsG0180001662.01.T01 MTR_8g027810 26.911 327 143 6 248 490 600 914 8.10e-26 112
MsG0180001662.01.T01 MTR_2g058990 25.513 341 180 6 223 490 613 952 9.32e-26 112
MsG0180001662.01.T01 MTR_1g039030 26.498 317 153 6 246 490 544 852 3.43e-25 110
MsG0180001662.01.T01 MTR_3g012530 26.159 302 167 6 237 490 380 673 3.98e-25 109
MsG0180001662.01.T01 MTR_8g086560 24.309 362 198 6 197 484 481 840 4.13e-25 110
MsG0180001662.01.T01 MTR_8g089940 25.537 419 222 11 148 489 272 677 4.68e-25 109
MsG0180001662.01.T01 MTR_4g088840 26.957 345 172 8 223 490 227 568 6.79e-25 108
MsG0180001662.01.T01 MTR_5g031490 27.344 384 204 13 155 490 297 653 1.09e-24 108
MsG0180001662.01.T01 MTR_1g040535 26.536 358 196 10 184 490 311 652 1.36e-24 108
MsG0180001662.01.T01 MTR_4g119420 28.443 334 170 9 223 490 236 566 8.71e-24 105
MsG0180001662.01.T01 MTR_6g012850 25.220 341 170 9 233 490 276 614 1.16e-23 105
MsG0180001662.01.T01 MTR_1g111670 24.561 342 182 5 223 490 268 607 5.51e-23 103
MsG0180001662.01.T01 MTR_1g059810 25.392 319 148 7 252 490 302 610 1.49e-21 98.6
MsG0180001662.01.T01 MTR_1g099590 25.392 319 142 8 249 490 557 856 5.22e-21 97.4
MsG0180001662.01.T01 MTR_6g022140 24.430 307 158 7 257 490 400 705 6.71e-20 94.0
MsG0180001662.01.T01 MTR_6g022140 24.104 307 159 7 257 490 400 705 7.76e-20 93.6
MsG0180001662.01.T01 MTR_7g093900 28.626 262 121 6 219 434 333 574 7.88e-20 93.6
MsG0180001662.01.T01 MTR_7g093900 28.626 262 121 6 219 434 383 624 1.18e-19 92.8
MsG0180001662.01.T01 MTR_5g049780 26.780 295 144 7 253 475 344 638 5.80e-19 90.9
MsG0180001662.01.T01 MTR_7g076707 26.267 217 117 4 169 350 270 478 1.00e-18 89.7
MsG0180001662.01.T01 MTR_5g071190 23.342 377 210 10 180 490 501 864 1.94e-18 89.4
MsG0180001662.01.T01 MTR_5g071190 27.559 127 88 2 218 344 188 310 9.84e-11 65.1
MsG0180001662.01.T01 MTR_6g024410 52.055 73 35 0 417 489 2 74 1.36e-17 79.3
MsG0180001662.01.T01 MTR_5g025700 52.055 73 35 0 417 489 2 74 5.36e-17 79.3
MsG0180001662.01.T01 MTR_2g009760 25.296 253 140 4 177 391 347 588 4.19e-16 81.6
MsG0180001662.01.T01 MTR_4g094692 23.188 276 134 7 219 418 481 754 1.54e-15 80.1
MsG0180001662.01.T01 MTR_5g091640 29.609 179 93 1 217 362 267 445 8.13e-15 77.4
MsG0180001662.01.T01 MTR_8g027150 31.902 163 78 4 219 348 218 380 8.28e-15 77.4
MsG0180001662.01.T01 MTR_3g080230 29.091 165 84 3 217 349 245 408 1.75e-13 73.2
MsG0180001662.01.T01 MTR_2g015530 23.333 270 157 5 196 426 257 515 7.26e-13 71.2
MsG0180001662.01.T01 MTR_4g082470 26.667 165 88 3 219 350 448 612 2.76e-12 69.7
MsG0180001662.01.T01 MTR_7g082550 29.167 168 97 3 219 365 215 381 8.00e-12 67.8
MsG0180001662.01.T01 MTR_2g064660 37.000 100 34 2 388 487 42 112 3.05e-11 61.6
MsG0180001662.01.T01 MTR_2g071810 27.397 146 74 1 235 348 442 587 6.62e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001662.01.T01 AT2G25580 44.444 378 141 5 174 490 223 592 7.30e-94 298
MsG0180001662.01.T01 AT2G25580 44.444 378 141 5 174 490 223 592 7.30e-94 298
MsG0180001662.01.T01 AT4G32450 40.691 376 153 6 174 490 150 514 1.08e-82 266
MsG0180001662.01.T01 AT1G29710 32.759 406 199 7 144 490 62 452 4.74e-61 208
MsG0180001662.01.T01 AT2G34370 34.737 380 169 7 174 489 81 445 1.46e-56 196
MsG0180001662.01.T01 AT2G15690 30.729 384 191 9 158 489 195 555 6.66e-44 164
MsG0180001662.01.T01 AT4G21065 27.649 387 199 6 177 490 61 439 1.42e-41 155
MsG0180001662.01.T01 AT4G21065 27.649 387 199 6 177 490 194 572 1.25e-40 155
MsG0180001662.01.T01 AT2G22070 32.628 331 150 7 233 490 433 763 1.53e-39 153
MsG0180001662.01.T01 AT4G37380 29.651 344 169 4 220 490 266 609 9.20e-39 150
MsG0180001662.01.T01 AT5G16860 30.595 353 157 8 223 492 487 834 3.07e-38 150
MsG0180001662.01.T01 AT3G62890 29.769 346 169 5 219 490 205 550 4.94e-38 147
MsG0180001662.01.T01 AT3G24000 29.360 344 170 6 219 490 268 610 6.79e-38 147
MsG0180001662.01.T01 AT2G02980 29.799 349 168 7 217 490 234 580 7.30e-38 147
MsG0180001662.01.T01 AT5G09950 30.086 349 166 6 219 490 619 966 8.76e-38 149
MsG0180001662.01.T01 AT5G09950 30.086 349 166 6 219 490 625 972 1.03e-37 148
MsG0180001662.01.T01 AT5G09950 30.086 349 166 6 219 490 625 972 1.03e-37 148
MsG0180001662.01.T01 AT3G49142 30.086 349 167 7 219 490 315 663 1.07e-37 147
MsG0180001662.01.T01 AT4G02750 26.650 394 210 5 175 489 364 757 4.03e-37 146
MsG0180001662.01.T01 AT5G40405 27.457 346 179 5 217 490 244 589 5.16e-37 145
MsG0180001662.01.T01 AT5G40405 27.457 346 179 5 217 490 244 589 5.16e-37 145
MsG0180001662.01.T01 AT3G61170 29.573 328 187 5 197 483 413 737 6.28e-37 145
MsG0180001662.01.T01 AT4G16835 29.412 340 168 6 223 490 294 633 1.62e-36 144
MsG0180001662.01.T01 AT3G49170 28.718 390 194 7 177 490 446 827 4.07e-36 143
MsG0180001662.01.T01 AT1G56690 29.032 372 186 8 195 490 312 681 4.95e-36 142
MsG0180001662.01.T01 AT4G30700 30.208 384 184 9 180 489 395 768 8.70e-36 142
MsG0180001662.01.T01 AT3G13770 31.475 305 168 5 229 492 270 574 4.42e-35 139
MsG0180001662.01.T01 AT3G47530 30.747 348 167 8 216 489 220 567 6.76e-35 138
MsG0180001662.01.T01 AT4G14050 29.968 317 148 5 248 490 220 536 9.25e-35 137
MsG0180001662.01.T01 AT4G14050 29.968 317 148 5 248 490 273 589 1.15e-34 138
MsG0180001662.01.T01 AT3G23330 27.035 344 179 6 219 490 240 583 1.23e-34 137
MsG0180001662.01.T01 AT3G23330 27.035 344 179 6 219 490 349 692 2.01e-34 138
MsG0180001662.01.T01 AT5G66520 28.902 346 169 8 220 490 254 597 3.08e-34 137
MsG0180001662.01.T01 AT4G33990 32.601 273 137 5 262 490 524 793 7.21e-34 136
MsG0180001662.01.T01 AT4G33990 32.601 273 137 5 262 490 531 800 7.23e-34 136
MsG0180001662.01.T01 AT4G18750 27.326 344 178 5 219 490 505 848 1.18e-33 136
MsG0180001662.01.T01 AT3G08820 29.904 311 146 4 252 490 352 662 1.21e-33 135
MsG0180001662.01.T01 AT3G12770 25.926 405 211 8 158 490 284 671 1.22e-33 135
MsG0180001662.01.T01 AT4G14850 26.590 346 180 3 219 490 316 661 1.60e-33 135
MsG0180001662.01.T01 AT1G59720 27.182 401 196 8 177 490 224 615 1.65e-33 135
MsG0180001662.01.T01 AT2G29760 27.543 403 205 8 166 490 322 715 1.67e-33 135
MsG0180001662.01.T01 AT3G57430 27.089 347 180 7 217 490 521 867 1.83e-33 135
MsG0180001662.01.T01 AT5G50990 27.434 339 177 3 220 489 172 510 2.37e-33 133
MsG0180001662.01.T01 AT1G11290 30.303 330 157 6 233 490 458 786 3.35e-33 134
MsG0180001662.01.T01 AT1G09410 28.032 371 192 6 195 490 312 682 6.47e-33 133
MsG0180001662.01.T01 AT3G26782 30.645 310 167 6 222 490 334 636 6.86e-33 133
MsG0180001662.01.T01 AT4G33170 30.887 327 148 6 242 490 641 967 1.40e-32 133
MsG0180001662.01.T01 AT3G63370 30.423 355 168 13 180 490 618 937 1.44e-32 133
MsG0180001662.01.T01 AT3G13770 28.698 338 167 6 229 492 270 607 1.67e-32 132
MsG0180001662.01.T01 AT1G20230 28.912 294 167 6 239 490 444 737 1.96e-32 132
MsG0180001662.01.T01 AT1G68930 28.161 348 168 5 220 490 378 720 2.25e-32 132
MsG0180001662.01.T01 AT1G68930 28.161 348 168 5 220 490 352 694 2.36e-32 132
MsG0180001662.01.T01 AT5G13230 27.566 341 174 6 223 490 459 799 4.79e-32 131
MsG0180001662.01.T01 AT2G03880 27.941 340 171 5 219 486 266 603 6.57e-32 130
MsG0180001662.01.T01 AT5G52630 32.281 285 144 6 245 484 279 559 7.60e-32 129
MsG0180001662.01.T01 AT1G16480 26.608 342 179 4 220 489 555 896 1.14e-31 130
MsG0180001662.01.T01 AT1G16480 26.608 342 179 4 220 489 572 913 1.23e-31 130
MsG0180001662.01.T01 AT3G46790 26.163 344 182 5 219 490 291 634 2.13e-31 129
MsG0180001662.01.T01 AT4G14820 28.729 362 176 8 209 490 340 699 2.27e-31 129
MsG0180001662.01.T01 AT2G27610 30.063 316 171 6 217 490 537 844 2.85e-31 129
MsG0180001662.01.T01 AT5G06540 27.666 347 178 7 217 490 253 599 3.05e-31 128
MsG0180001662.01.T01 AT1G04840 26.163 344 182 4 219 490 299 642 4.83e-31 127
MsG0180001662.01.T01 AT3G03580 27.933 358 185 5 206 490 502 859 6.93e-31 127
MsG0180001662.01.T01 AT1G31920 27.744 328 165 7 235 490 256 583 1.01e-30 126
MsG0180001662.01.T01 AT4G37170 28.406 345 173 7 219 490 325 668 1.41e-30 126
MsG0180001662.01.T01 AT3G14330 26.744 344 179 7 219 489 343 686 2.00e-30 126
MsG0180001662.01.T01 AT1G25360 28.797 316 152 6 248 490 452 767 2.53e-30 125
MsG0180001662.01.T01 AT2G01510 28.902 346 172 6 219 490 216 561 7.31e-30 124
MsG0180001662.01.T01 AT2G01510 28.902 346 172 6 219 490 216 561 7.31e-30 124
MsG0180001662.01.T01 AT4G13650 25.937 347 177 6 220 490 699 1041 5.46e-29 122
MsG0180001662.01.T01 AT3G02010 26.377 345 181 6 219 490 458 802 6.58e-29 121
MsG0180001662.01.T01 AT5G39680 24.490 343 187 3 219 489 344 686 1.27e-28 120
MsG0180001662.01.T01 AT5G46460 29.942 344 166 11 220 490 333 674 2.06e-28 120
MsG0180001662.01.T01 AT3G22690 27.195 353 171 6 217 490 474 819 4.54e-28 119
MsG0180001662.01.T01 AT3G22690 27.195 353 171 6 217 490 474 819 6.08e-28 119
MsG0180001662.01.T01 AT3G15130 28.462 390 181 12 180 486 288 662 6.79e-28 118
MsG0180001662.01.T01 AT2G41080 29.603 277 141 7 262 490 357 627 1.61e-27 117
MsG0180001662.01.T01 AT1G08070 25.124 402 210 11 169 490 224 614 2.49e-26 113
MsG0180001662.01.T01 AT5G40410 28.758 306 145 6 252 484 274 579 2.80e-26 113
MsG0180001662.01.T01 AT1G08070 25.124 402 210 11 169 490 328 718 4.58e-26 112
MsG0180001662.01.T01 AT5G03800 27.666 347 176 8 219 490 527 873 1.04e-25 112
MsG0180001662.01.T01 AT1G47580 51.087 92 45 0 399 490 125 216 1.15e-25 105
MsG0180001662.01.T01 AT5G48910 26.178 382 196 8 184 490 253 623 1.40e-25 111
MsG0180001662.01.T01 AT2G33760 26.286 350 181 8 217 490 212 560 1.88e-25 110
MsG0180001662.01.T01 AT4G15720 27.273 352 176 6 219 490 242 593 3.04e-25 110
MsG0180001662.01.T01 AT5G15340 26.836 354 174 8 219 490 250 600 5.06e-25 109
MsG0180001662.01.T01 AT4G01030 26.225 347 178 8 219 490 402 745 1.55e-24 108
MsG0180001662.01.T01 AT3G11460 29.022 317 143 8 248 490 292 600 1.58e-24 107
MsG0180001662.01.T01 AT1G74630 28.035 346 175 8 219 490 275 620 1.68e-24 107
MsG0180001662.01.T01 AT1G74630 28.035 346 175 8 219 490 290 635 1.87e-24 107
MsG0180001662.01.T01 AT5G04780 24.551 334 180 5 223 484 273 606 4.49e-24 106
MsG0180001662.01.T01 AT3G49710 25.291 344 181 8 223 490 355 698 8.52e-24 105
MsG0180001662.01.T01 AT5G44230 26.518 313 154 6 252 489 225 536 9.30e-24 105
MsG0180001662.01.T01 AT5G44230 26.518 313 154 6 252 489 322 633 1.07e-23 105
MsG0180001662.01.T01 AT1G15510 26.205 332 171 7 233 492 518 847 1.37e-23 105
MsG0180001662.01.T01 AT1G34160 29.154 319 149 8 248 490 241 558 1.73e-23 104
MsG0180001662.01.T01 AT1G34160 29.154 319 149 8 248 490 194 511 2.19e-23 103
MsG0180001662.01.T01 AT1G18485 25.513 341 181 6 223 490 607 947 8.35e-23 103
MsG0180001662.01.T01 AT3G22690 27.134 328 172 7 217 490 474 788 1.35e-22 102
MsG0180001662.01.T01 AT1G71420 26.667 315 155 7 252 490 408 722 3.84e-22 100
MsG0180001662.01.T01 AT5G65570 26.744 344 176 9 220 490 375 715 6.09e-21 97.1
MsG0180001662.01.T01 AT5G50390 25.418 299 178 5 237 490 380 678 1.72e-20 95.5
MsG0180001662.01.T01 AT1G06140 28.395 162 84 1 219 348 318 479 1.32e-16 83.2
MsG0180001662.01.T01 AT4G35130 23.669 338 181 5 228 490 446 781 2.10e-15 79.7
MsG0180001662.01.T01 AT4G19191 26.887 212 114 3 180 358 332 535 4.90e-15 78.6
MsG0180001662.01.T01 AT2G13600 29.167 168 81 3 219 348 392 559 8.94e-15 77.8
MsG0180001662.01.T01 AT5G52850 23.220 323 181 10 213 490 566 866 1.68e-14 77.0
MsG0180001662.01.T01 AT4G14170 23.744 219 128 3 161 348 92 302 5.96e-14 73.9
MsG0180001662.01.T01 AT4G14170 25.000 200 111 3 180 348 210 401 1.39e-13 73.6
MsG0180001662.01.T01 AT5G08490 29.197 137 91 3 217 352 572 703 1.69e-13 73.9
MsG0180001662.01.T01 AT1G28690 27.143 210 117 4 223 397 283 491 4.85e-13 72.0
MsG0180001662.01.T01 AT2G03380 28.916 166 84 3 219 350 449 614 8.30e-13 71.6
MsG0180001662.01.T01 AT5G43790 28.090 178 96 1 219 364 222 399 1.38e-12 70.1
MsG0180001662.01.T01 AT2G34400 25.248 202 106 5 180 348 309 498 9.07e-12 68.2
MsG0180001662.01.T01 AT3G53360 27.273 165 86 3 219 350 479 642 5.96e-11 65.5
MsG0180001662.01.T01 AT3G53360 27.273 165 86 3 219 350 479 642 5.96e-11 65.5
MsG0180001662.01.T01 AT2G42920 23.963 217 125 5 180 364 233 441 6.41e-11 65.1
MsG0180001662.01.T01 AT2G42920 23.963 217 125 5 180 364 233 441 6.41e-11 65.1

Find 97 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTCTGCAAACCCATTCT+TGG 0.249838 1:-24869104 None:intergenic
GAATGTAGTTCAAAGTAATT+TGG 0.263946 1:+24868171 MsG0180001662.01.T01:CDS
AGTTCAGAGCGAATTTATTA+TGG 0.265666 1:+24868100 MsG0180001662.01.T01:intron
GGTTCATATTCCTGTGGATT+TGG 0.266645 1:+24868853 MsG0180001662.01.T01:CDS
ACTTAGGCCTATAGAGTATC+AGG 0.273971 1:+24868375 MsG0180001662.01.T01:CDS
TTGTTAAGTTTATCTTTATA+TGG 0.273987 1:-24868472 None:intergenic
AATTACTTTGAACTACATTC+TGG 0.284486 1:-24868168 None:intergenic
GGCTTTGGGATGCATCCTTA+TGG 0.299197 1:+24868283 MsG0180001662.01.T01:CDS
TATGCTCCTGCAGGGATTAT+TGG 0.303015 1:+24869924 MsG0180001662.01.T01:CDS
TTGATAATTCAAGGGGCTTT+GGG 0.304013 1:+24868269 MsG0180001662.01.T01:CDS
GTTGATAATTCAAGGGGCTT+TGG 0.305640 1:+24868268 MsG0180001662.01.T01:CDS
CCTAAGTAAACTATGTGAAT+TGG 0.322247 1:-24868359 None:intergenic
TAGACATGATTGGTAGTATT+GGG 0.344181 1:+24869303 MsG0180001662.01.T01:CDS
TCATCATCCGAGATGCTAAA+AGG 0.357561 1:+24869879 MsG0180001662.01.T01:CDS
CTATGACATTGTACCAACTA+TGG 0.378147 1:+24869262 MsG0180001662.01.T01:CDS
TCAAAATGCAACATAAAGTT+GGG 0.378669 1:+24868239 MsG0180001662.01.T01:CDS
GAGCGAATTTATTATGGATC+TGG 0.379674 1:+24868106 MsG0180001662.01.T01:CDS
TTCAAAATGCAACATAAAGT+TGG 0.381156 1:+24868238 MsG0180001662.01.T01:CDS
CAGCACATGCAATGGAATAT+TGG 0.381329 1:+24868979 MsG0180001662.01.T01:CDS
TACTTTGCTTAGACGTTTGA+GGG 0.386105 1:+24869629 MsG0180001662.01.T01:CDS
TATCTCCTGCTCGATATTCA+TGG 0.387446 1:-24869578 None:intergenic
CTAAGTAAACTATGTGAATT+GGG 0.407861 1:-24868358 None:intergenic
GGGTGGGTGTTGATAATTCA+AGG 0.409536 1:+24868260 MsG0180001662.01.T01:CDS
AGTAATTTGGCAGAGCATAA+TGG 0.416866 1:+24868184 MsG0180001662.01.T01:CDS
ATTACTTTGAACTACATTCT+GGG 0.421709 1:-24868167 None:intergenic
ATACTTTGCTTAGACGTTTG+AGG 0.423921 1:+24869628 MsG0180001662.01.T01:CDS
TGATGTCCCTGATACTCTAT+AGG 0.426530 1:-24868382 None:intergenic
ACCTCTACACTTGGTTCCAT+TGG 0.430193 1:-24869362 None:intergenic
GTAGACATGATTGGTAGTAT+TGG 0.435923 1:+24869302 MsG0180001662.01.T01:CDS
ATTAAGAATCTCCGTGTTTG+TGG 0.447294 1:+24869807 MsG0180001662.01.T01:CDS
CCAATTCACATAGTTTACTT+AGG 0.448250 1:+24868359 MsG0180001662.01.T01:CDS
TTGCATGTGCTGACTTTAAG+AGG 0.454092 1:-24868968 None:intergenic
AGCATAATGGAAGTGTCAAT+GGG 0.454704 1:+24868197 MsG0180001662.01.T01:CDS
GAGCATAATGGAAGTGTCAA+TGG 0.455018 1:+24868196 MsG0180001662.01.T01:CDS
GGAAGTGTCAATGGGGACTT+TGG 0.460231 1:+24868205 MsG0180001662.01.T01:CDS
AAGATTATTTCTGATCTTGT+GGG 0.464953 1:+24869849 MsG0180001662.01.T01:CDS
AAGAGAATTAACAGTAACTA+AGG 0.466113 1:-24867889 None:intergenic
GAAGATTATTTCTGATCTTG+TGG 0.469862 1:+24869848 MsG0180001662.01.T01:CDS
ATAAAGCAGCTCGCCAAGAA+TGG 0.473579 1:+24869091 MsG0180001662.01.T01:CDS
AGAAAAGCTTCATGCTTATG+TGG 0.476503 1:+24868555 MsG0180001662.01.T01:CDS
GTAAGTTTAGTAGACATGAT+TGG 0.483190 1:+24869293 MsG0180001662.01.T01:CDS
CACGTTGCAAATTGTATCAA+AGG 0.489215 1:+24867942 MsG0180001662.01.T01:CDS
GATTTCTCATTTAAACGAGA+TGG 0.489341 1:-24869468 None:intergenic
AAAATGGGCTATGCTCCTGC+AGG 0.490065 1:+24869915 MsG0180001662.01.T01:CDS
TGGGAATCTTGATGAAGCCT+TGG 0.504893 1:+24869322 MsG0180001662.01.T01:CDS
CAAGTCTCTCACTGTGGCCA+AGG 0.509320 1:-24869734 None:intergenic
TAAAGCAGCTCGCCAAGAAT+GGG 0.512110 1:+24869092 MsG0180001662.01.T01:CDS
GATAAAGAAGATGCTCTCCT+TGG 0.513596 1:+24869717 MsG0180001662.01.T01:CDS
TACTACGAGCAGGACTGTTA+AGG 0.515339 1:-24869773 None:intergenic
GAGATTCTTAATTACTCTGA+TGG 0.522350 1:-24869796 None:intergenic
CTGCTCGATATTCATGGATA+CGG 0.523593 1:-24869572 None:intergenic
TTAAATGAGAAATCAAAAGT+TGG 0.528816 1:+24869477 MsG0180001662.01.T01:CDS
TTTGGTGCATGTAGTATGCT+GGG 0.532330 1:+24869194 MsG0180001662.01.T01:intron
TGTCTCTCAAAAGAACCATA+AGG 0.532637 1:-24868298 None:intergenic
TGAGAGACTTGCTATTGCTA+AGG 0.533946 1:+24869746 MsG0180001662.01.T01:CDS
CATGATTGGAGACTAGAATC+CGG 0.538532 1:+24868319 MsG0180001662.01.T01:CDS
CTTACATAATGTGCCATAGT+TGG 0.541096 1:-24869275 None:intergenic
GTCTCCCATACCTCTACACT+TGG 0.544107 1:-24869371 None:intergenic
ATAGAGTATCAGGGACATCA+TGG 0.546841 1:+24868385 MsG0180001662.01.T01:CDS
ATGCTGGGAGATATTGTTGA+GGG 0.553989 1:+24869209 MsG0180001662.01.T01:CDS
CTTAAAGTCAGCACATGCAA+TGG 0.555458 1:+24868971 MsG0180001662.01.T01:CDS
ATATTTCCACCGCTGCTGAA+AGG 0.560637 1:+24867982 MsG0180001662.01.T01:CDS
AATGTCATAGTCCCTACTCA+TGG 0.560874 1:-24869249 None:intergenic
ACTCTGATGGTACTACGAGC+AGG 0.566713 1:-24869783 None:intergenic
ACGTTGCAAATTGTATCAAA+GGG 0.567880 1:+24867943 MsG0180001662.01.T01:CDS
AGGGTGCACATGAAAGAAGC+TGG 0.569461 1:+24869648 MsG0180001662.01.T01:CDS
GTTCATTGAAAAGATGCCAA+TGG 0.571820 1:+24869346 MsG0180001662.01.T01:CDS
GAGAGACTTGCTATTGCTAA+GGG 0.576212 1:+24869747 MsG0180001662.01.T01:CDS
TGTTCACCAATAATCCCTGC+AGG 0.578395 1:-24869930 None:intergenic
ATACGGCTAAGATTATTGTC+TGG 0.578637 1:-24869555 None:intergenic
AATGCAACATAAAGTTGGGG+TGG 0.580999 1:+24868243 MsG0180001662.01.T01:CDS
ATCCCACCTTTCAGCAGCGG+TGG 0.581673 1:-24867988 None:intergenic
ACACTTTGAATCCATGAGTA+GGG 0.586167 1:+24869238 MsG0180001662.01.T01:CDS
GGTGGGTGTTGATAATTCAA+GGG 0.594015 1:+24868261 MsG0180001662.01.T01:CDS
CGTATCCATGAATATCGAGC+AGG 0.595049 1:+24869573 MsG0180001662.01.T01:CDS
GTGGGTGTTGATAATTCAAG+GGG 0.601550 1:+24868262 MsG0180001662.01.T01:CDS
ATGCAACATAAAGTTGGGGT+GGG 0.604200 1:+24868244 MsG0180001662.01.T01:CDS
CTTAGGCCTATAGAGTATCA+GGG 0.610390 1:+24868376 MsG0180001662.01.T01:CDS
AAACAACGATCCAAATCCAC+AGG 0.611637 1:-24868863 None:intergenic
CTTTGATACAATTTGCAACG+TGG 0.616574 1:-24867941 None:intergenic
TATGCTGGGAGATATTGTTG+AGG 0.616693 1:+24869208 MsG0180001662.01.T01:CDS
TGCGATTAATGCAACAATGT+GGG 0.619619 1:+24868885 MsG0180001662.01.T01:CDS
TAGAGTATCAGGGACATCAT+GGG 0.620130 1:+24868386 MsG0180001662.01.T01:CDS
GATATCCCACCTTTCAGCAG+CGG 0.620281 1:-24867991 None:intergenic
TAGAAAGGTTCATATTCCTG+TGG 0.621457 1:+24868847 MsG0180001662.01.T01:intron
GCCAATGGAACCAAGTGTAG+AGG 0.624170 1:+24869361 MsG0180001662.01.T01:CDS
TACACTTTGAATCCATGAGT+AGG 0.630872 1:+24869237 MsG0180001662.01.T01:CDS
CAAAATGCAACATAAAGTTG+GGG 0.646833 1:+24868240 MsG0180001662.01.T01:CDS
GGATCTGGTCAAACTGCACG+TGG 0.655131 1:+24868121 MsG0180001662.01.T01:CDS
TATGACAATCACCACAAACA+CGG 0.659449 1:-24869818 None:intergenic
AAATGGGCTATGCTCCTGCA+GGG 0.683989 1:+24869916 MsG0180001662.01.T01:CDS
TTGCGATTAATGCAACAATG+TGG 0.685589 1:+24868884 MsG0180001662.01.T01:CDS
TCTGGTCAAACTGCACGTGG+AGG 0.698276 1:+24868124 MsG0180001662.01.T01:CDS
ATTAATGCAACAATGTGGGA+AGG 0.701679 1:+24868889 MsG0180001662.01.T01:CDS
GGGAACCTTACTCAAAACAG+TGG 0.715780 1:+24868406 MsG0180001662.01.T01:CDS
GCATAATGGAAGTGTCAATG+GGG 0.743759 1:+24868198 MsG0180001662.01.T01:CDS
CAATAGCAAGTCTCTCACTG+TGG 0.765936 1:-24869740 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATTTACTGAATTTAAA+AGG + Chr1:24869134-24869153 MsG0180001662.01.T01:intron 10.0%
!! TTGTTAAGTTTATCTTTATA+TGG - Chr1:24868475-24868494 None:intergenic 15.0%
!! TTAAATGAGAAATCAAAAGT+TGG + Chr1:24869477-24869496 MsG0180001662.01.T01:CDS 20.0%
! AAGAGAATTAACAGTAACTA+AGG - Chr1:24867892-24867911 None:intergenic 25.0%
! AATTACTTTGAACTACATTC+TGG - Chr1:24868171-24868190 None:intergenic 25.0%
! ATATCAAGCTAATGATTCTT+CGG + Chr1:24868009-24868028 MsG0180001662.01.T01:intron 25.0%
! ATTACTTTGAACTACATTCT+GGG - Chr1:24868170-24868189 None:intergenic 25.0%
! CTAAGTAAACTATGTGAATT+GGG - Chr1:24868361-24868380 None:intergenic 25.0%
! GAATGTAGTTCAAAGTAATT+TGG + Chr1:24868171-24868190 MsG0180001662.01.T01:CDS 25.0%
! TCAAAATGCAACATAAAGTT+GGG + Chr1:24868239-24868258 MsG0180001662.01.T01:CDS 25.0%
! TTCAAAATGCAACATAAAGT+TGG + Chr1:24868238-24868257 MsG0180001662.01.T01:CDS 25.0%
! TTTACTGAATTTAAAAGGAG+TGG + Chr1:24869139-24869158 MsG0180001662.01.T01:intron 25.0%
!! TTAGAGATGTATTTTCAATG+TGG + Chr1:24868704-24868723 MsG0180001662.01.T01:intron 25.0%
!!! AAGATTATTTCTGATCTTGT+GGG + Chr1:24869849-24869868 MsG0180001662.01.T01:CDS 25.0%
!!! AGGTTCCATCATTTTAAAAA+TGG + Chr1:24869899-24869918 MsG0180001662.01.T01:CDS 25.0%
!!! ATAGCCCATTTTTAAAATGA+TGG - Chr1:24869907-24869926 None:intergenic 25.0%
!!! GAGTTTTGAGTATTCATATT+TGG - Chr1:24868448-24868467 None:intergenic 25.0%
!!! GGTTCCATCATTTTAAAAAT+GGG + Chr1:24869900-24869919 MsG0180001662.01.T01:CDS 25.0%
!!! GTATAGATCATGTTATTTTC+TGG - Chr1:24869612-24869631 None:intergenic 25.0%
ACGTTGCAAATTGTATCAAA+GGG + Chr1:24867943-24867962 MsG0180001662.01.T01:CDS 30.0%
AGTTCAGAGCGAATTTATTA+TGG + Chr1:24868100-24868119 MsG0180001662.01.T01:intron 30.0%
ATGAATAGTTGTAGAGTTCA+TGG + Chr1:24869398-24869417 MsG0180001662.01.T01:intron 30.0%
CAAAATGCAACATAAAGTTG+GGG + Chr1:24868240-24868259 MsG0180001662.01.T01:CDS 30.0%
CCAATTCACATAGTTTACTT+AGG + Chr1:24868359-24868378 MsG0180001662.01.T01:CDS 30.0%
CCTAAGTAAACTATGTGAAT+TGG - Chr1:24868362-24868381 None:intergenic 30.0%
GAGATTCTTAATTACTCTGA+TGG - Chr1:24869799-24869818 None:intergenic 30.0%
GATTTCTCATTTAAACGAGA+TGG - Chr1:24869471-24869490 None:intergenic 30.0%
GTAAGTTTAGTAGACATGAT+TGG + Chr1:24869293-24869312 MsG0180001662.01.T01:CDS 30.0%
TCTGAACTAGCATGATTATT+CGG - Chr1:24868088-24868107 None:intergenic 30.0%
TTTCATCAGCAAAATGCAAA+TGG + Chr1:24868055-24868074 MsG0180001662.01.T01:intron 30.0%
! CAAACTAGATGAATTTTGCA+AGG + Chr1:24868492-24868511 MsG0180001662.01.T01:CDS 30.0%
! TAGACATGATTGGTAGTATT+GGG + Chr1:24869303-24869322 MsG0180001662.01.T01:CDS 30.0%
! TTGGAGATGTATTTTCAATG+TGG + Chr1:24868998-24869017 MsG0180001662.01.T01:CDS 30.0%
!! GAAGATTATTTCTGATCTTG+TGG + Chr1:24869848-24869867 MsG0180001662.01.T01:CDS 30.0%
!! TTGTTTTGCAAGTGTTAGAA+AGG + Chr1:24868832-24868851 MsG0180001662.01.T01:intron 30.0%
ACACTTTGAATCCATGAGTA+GGG + Chr1:24869238-24869257 MsG0180001662.01.T01:CDS 35.0%
ACTGATGGCCAAATGTTTAT+TGG + Chr1:24869168-24869187 MsG0180001662.01.T01:intron 35.0%
AGAAAAGCTTCATGCTTATG+TGG + Chr1:24868555-24868574 MsG0180001662.01.T01:CDS 35.0%
AGTAATTTGGCAGAGCATAA+TGG + Chr1:24868184-24868203 MsG0180001662.01.T01:CDS 35.0%
ATACGGCTAAGATTATTGTC+TGG - Chr1:24869558-24869577 None:intergenic 35.0%
ATACTTTGCTTAGACGTTTG+AGG + Chr1:24869628-24869647 MsG0180001662.01.T01:CDS 35.0%
ATTAAGAATCTCCGTGTTTG+TGG + Chr1:24869807-24869826 MsG0180001662.01.T01:CDS 35.0%
ATTAATGCAACAATGTGGGA+AGG + Chr1:24868889-24868908 MsG0180001662.01.T01:CDS 35.0%
CACGTTGCAAATTGTATCAA+AGG + Chr1:24867942-24867961 MsG0180001662.01.T01:CDS 35.0%
CCAAAACCCCAATAAACATT+TGG - Chr1:24869179-24869198 None:intergenic 35.0%
CTATGACATTGTACCAACTA+TGG + Chr1:24869262-24869281 MsG0180001662.01.T01:CDS 35.0%
CTGATGGCCAAATGTTTATT+GGG + Chr1:24869169-24869188 MsG0180001662.01.T01:intron 35.0%
CTTACATAATGTGCCATAGT+TGG - Chr1:24869278-24869297 None:intergenic 35.0%
CTTTGATACAATTTGCAACG+TGG - Chr1:24867944-24867963 None:intergenic 35.0%
GAGCGAATTTATTATGGATC+TGG + Chr1:24868106-24868125 MsG0180001662.01.T01:CDS 35.0%
GATTATACAACTGTGTGGAA+AGG + Chr1:24868595-24868614 MsG0180001662.01.T01:intron 35.0%
GTTCATTGAAAAGATGCCAA+TGG + Chr1:24869346-24869365 MsG0180001662.01.T01:CDS 35.0%
TACACTTTGAATCCATGAGT+AGG + Chr1:24869237-24869256 MsG0180001662.01.T01:CDS 35.0%
TACTTTGCTTAGACGTTTGA+GGG + Chr1:24869629-24869648 MsG0180001662.01.T01:CDS 35.0%
TAGAAAGGTTCATATTCCTG+TGG + Chr1:24868847-24868866 MsG0180001662.01.T01:intron 35.0%
TATGACAATCACCACAAACA+CGG - Chr1:24869821-24869840 None:intergenic 35.0%
TGATGGCCAAATGTTTATTG+GGG + Chr1:24869170-24869189 MsG0180001662.01.T01:intron 35.0%
TGCGATTAATGCAACAATGT+GGG + Chr1:24868885-24868904 MsG0180001662.01.T01:CDS 35.0%
TGTCTCTCAAAAGAACCATA+AGG - Chr1:24868301-24868320 None:intergenic 35.0%
TTGCGATTAATGCAACAATG+TGG + Chr1:24868884-24868903 MsG0180001662.01.T01:CDS 35.0%
TTTGCGATTATACAACTGTG+TGG + Chr1:24868590-24868609 MsG0180001662.01.T01:intron 35.0%
! ACTAGATGAATTTTGCAAGG+AGG + Chr1:24868495-24868514 MsG0180001662.01.T01:CDS 35.0%
! CATCTTTTCAATGAACTCCA+AGG - Chr1:24869342-24869361 None:intergenic 35.0%
! CCAAATGTTTATTGGGGTTT+TGG + Chr1:24869176-24869195 MsG0180001662.01.T01:intron 35.0%
! CTAGATGAATTTTGCAAGGA+GGG + Chr1:24868496-24868515 MsG0180001662.01.T01:CDS 35.0%
! GTAGACATGATTGGTAGTAT+TGG + Chr1:24869302-24869321 MsG0180001662.01.T01:CDS 35.0%
! TTGATAATTCAAGGGGCTTT+GGG + Chr1:24868269-24868288 MsG0180001662.01.T01:CDS 35.0%
!! AGCATAATGGAAGTGTCAAT+GGG + Chr1:24868197-24868216 MsG0180001662.01.T01:CDS 35.0%
!! GTTCTTTTGAGAGACATGAT+TGG + Chr1:24868305-24868324 MsG0180001662.01.T01:CDS 35.0%
AAACAACGATCCAAATCCAC+AGG - Chr1:24868866-24868885 None:intergenic 40.0%
AAAGGCTGAGTTTCTTGAAG+AGG + Chr1:24868613-24868632 MsG0180001662.01.T01:intron 40.0%
AATGCAACATAAAGTTGGGG+TGG + Chr1:24868243-24868262 MsG0180001662.01.T01:CDS 40.0%
AATGTCATAGTCCCTACTCA+TGG - Chr1:24869252-24869271 None:intergenic 40.0%
ATCTTCTGCAAACCCATTCT+TGG - Chr1:24869107-24869126 None:intergenic 40.0%
ATGCAACATAAAGTTGGGGT+GGG + Chr1:24868244-24868263 MsG0180001662.01.T01:CDS 40.0%
ATGCTGGGAGATATTGTTGA+GGG + Chr1:24869209-24869228 MsG0180001662.01.T01:CDS 40.0%
ATTACCAGCAAAATCGTCCT+AGG + Chr1:24868032-24868051 MsG0180001662.01.T01:intron 40.0%
CAGCACATGCAATGGAATAT+TGG + Chr1:24868979-24868998 MsG0180001662.01.T01:CDS 40.0%
CATGATTGGAGACTAGAATC+CGG + Chr1:24868319-24868338 MsG0180001662.01.T01:CDS 40.0%
CTGCTCGATATTCATGGATA+CGG - Chr1:24869575-24869594 None:intergenic 40.0%
CTTAAAGTCAGCACATGCAA+TGG + Chr1:24868971-24868990 MsG0180001662.01.T01:CDS 40.0%
GATAAAGAAGATGCTCTCCT+TGG + Chr1:24869717-24869736 MsG0180001662.01.T01:CDS 40.0%
GGTTCATATTCCTGTGGATT+TGG + Chr1:24868853-24868872 MsG0180001662.01.T01:CDS 40.0%
TAGATGTAGTCAACGTGTTC+AGG + Chr1:24868732-24868751 MsG0180001662.01.T01:intron 40.0%
TATCTCCTGCTCGATATTCA+TGG - Chr1:24869581-24869600 None:intergenic 40.0%
TATGCTGGGAGATATTGTTG+AGG + Chr1:24869208-24869227 MsG0180001662.01.T01:CDS 40.0%
TCATCATCCGAGATGCTAAA+AGG + Chr1:24869879-24869898 MsG0180001662.01.T01:CDS 40.0%
TGATGTCCCTGATACTCTAT+AGG - Chr1:24868385-24868404 None:intergenic 40.0%
! ACTTAGGCCTATAGAGTATC+AGG + Chr1:24868375-24868394 MsG0180001662.01.T01:CDS 40.0%
! ACTTGATAGTTCTTGCATGG+AGG + Chr1:24868788-24868807 MsG0180001662.01.T01:intron 40.0%
! AGGACTTGATAGTTCTTGCA+TGG + Chr1:24868785-24868804 MsG0180001662.01.T01:intron 40.0%
! ATAGAGTATCAGGGACATCA+TGG + Chr1:24868385-24868404 MsG0180001662.01.T01:CDS 40.0%
! CTTAGGCCTATAGAGTATCA+GGG + Chr1:24868376-24868395 MsG0180001662.01.T01:CDS 40.0%
! CTTGATAGTTCTTGCATGGA+GGG + Chr1:24868789-24868808 MsG0180001662.01.T01:intron 40.0%
! GATGGAACCTTTTAGCATCT+CGG - Chr1:24869889-24869908 None:intergenic 40.0%
! GCATTTTGCTGATGAAACCT+AGG - Chr1:24868052-24868071 None:intergenic 40.0%
! GGGATACTTCATCTTTTCTC+CGG - Chr1:24868341-24868360 None:intergenic 40.0%
! TAGAGTATCAGGGACATCAT+GGG + Chr1:24868386-24868405 MsG0180001662.01.T01:CDS 40.0%
! TTTGGTGCATGTAGTATGCT+GGG + Chr1:24869194-24869213 MsG0180001662.01.T01:intron 40.0%
!! AACGACCACTGTTTTGAGTA+AGG - Chr1:24868414-24868433 None:intergenic 40.0%
!! AAGGAGTGGACTAAAACTGA+TGG + Chr1:24869153-24869172 MsG0180001662.01.T01:intron 40.0%
!! GAGAGACTTGCTATTGCTAA+GGG + Chr1:24869747-24869766 MsG0180001662.01.T01:CDS 40.0%
!! GAGCATAATGGAAGTGTCAA+TGG + Chr1:24868196-24868215 MsG0180001662.01.T01:CDS 40.0%
!! GCATAATGGAAGTGTCAATG+GGG + Chr1:24868198-24868217 MsG0180001662.01.T01:CDS 40.0%
!! GGTGGGTGTTGATAATTCAA+GGG + Chr1:24868261-24868280 MsG0180001662.01.T01:CDS 40.0%
!! GTGGGTGTTGATAATTCAAG+GGG + Chr1:24868262-24868281 MsG0180001662.01.T01:CDS 40.0%
!! GTTGATAATTCAAGGGGCTT+TGG + Chr1:24868268-24868287 MsG0180001662.01.T01:CDS 40.0%
!! TGAGAGACTTGCTATTGCTA+AGG + Chr1:24869746-24869765 MsG0180001662.01.T01:CDS 40.0%
!! TTGCATGTGCTGACTTTAAG+AGG - Chr1:24868971-24868990 None:intergenic 40.0%
!! TTTTGGTGCATGTAGTATGC+TGG + Chr1:24869193-24869212 MsG0180001662.01.T01:intron 40.0%
ACCTCTACACTTGGTTCCAT+TGG - Chr1:24869365-24869384 None:intergenic 45.0%
AGAGTTCATGGAAACACTGC+TGG + Chr1:24869410-24869429 MsG0180001662.01.T01:intron 45.0%
AGTTCATGGAAACACTGCTG+GGG + Chr1:24869412-24869431 MsG0180001662.01.T01:intron 45.0%
ATAAAGCAGCTCGCCAAGAA+TGG + Chr1:24869091-24869110 MsG0180001662.01.T01:CDS 45.0%
ATATTTCCACCGCTGCTGAA+AGG + Chr1:24867982-24868001 MsG0180001662.01.T01:CDS 45.0%
CAATAGCAAGTCTCTCACTG+TGG - Chr1:24869743-24869762 None:intergenic 45.0%
CGTATCCATGAATATCGAGC+AGG + Chr1:24869573-24869592 MsG0180001662.01.T01:CDS 45.0%
GAGTTCATGGAAACACTGCT+GGG + Chr1:24869411-24869430 MsG0180001662.01.T01:intron 45.0%
GGGAACCTTACTCAAAACAG+TGG + Chr1:24868406-24868425 MsG0180001662.01.T01:CDS 45.0%
TAAAGCAGCTCGCCAAGAAT+GGG + Chr1:24869092-24869111 MsG0180001662.01.T01:CDS 45.0%
TACTACGAGCAGGACTGTTA+AGG - Chr1:24869776-24869795 None:intergenic 45.0%
TATGCTCCTGCAGGGATTAT+TGG + Chr1:24869924-24869943 MsG0180001662.01.T01:CDS 45.0%
TGACTGAGCGCAAATTGATG+AGG + Chr1:24868765-24868784 MsG0180001662.01.T01:intron 45.0%
TGCTGAACTGGTTGAGAAGT+TGG + Chr1:24869443-24869462 MsG0180001662.01.T01:intron 45.0%
TGGAACCAAGTGTAGAGGTA+TGG + Chr1:24869366-24869385 MsG0180001662.01.T01:intron 45.0%
TGGGAATCTTGATGAAGCCT+TGG + Chr1:24869322-24869341 MsG0180001662.01.T01:CDS 45.0%
TGTTCACCAATAATCCCTGC+AGG - Chr1:24869933-24869952 None:intergenic 45.0%
! GAAACCTAGGACGATTTTGC+TGG - Chr1:24868039-24868058 None:intergenic 45.0%
! GGAACCAAGTGTAGAGGTAT+GGG + Chr1:24869367-24869386 MsG0180001662.01.T01:intron 45.0%
!! GGGTGGGTGTTGATAATTCA+AGG + Chr1:24868260-24868279 MsG0180001662.01.T01:CDS 45.0%
ACTCTGATGGTACTACGAGC+AGG - Chr1:24869786-24869805 None:intergenic 50.0%
AGGGTGCACATGAAAGAAGC+TGG + Chr1:24869648-24869667 MsG0180001662.01.T01:CDS 50.0%
GATATCCCACCTTTCAGCAG+CGG - Chr1:24867994-24868013 None:intergenic 50.0%
GCCAATGGAACCAAGTGTAG+AGG + Chr1:24869361-24869380 MsG0180001662.01.T01:CDS 50.0%
GTCTCCCATACCTCTACACT+TGG - Chr1:24869374-24869393 None:intergenic 50.0%
GTTCATGGAAACACTGCTGG+GGG + Chr1:24869413-24869432 MsG0180001662.01.T01:intron 50.0%
TTGCATGGAGGGTGAAGTGA+AGG + Chr1:24868800-24868819 MsG0180001662.01.T01:intron 50.0%
!! AAAATGGGCTATGCTCCTGC+AGG + Chr1:24869915-24869934 MsG0180001662.01.T01:CDS 50.0%
!! AAATGGGCTATGCTCCTGCA+GGG + Chr1:24869916-24869935 MsG0180001662.01.T01:CDS 50.0%
!! GGAAGTGTCAATGGGGACTT+TGG + Chr1:24868205-24868224 MsG0180001662.01.T01:CDS 50.0%
!! GGCTTTGGGATGCATCCTTA+TGG + Chr1:24868283-24868302 MsG0180001662.01.T01:CDS 50.0%
CAAGTCTCTCACTGTGGCCA+AGG - Chr1:24869737-24869756 None:intergenic 55.0%
GGATCTGGTCAAACTGCACG+TGG + Chr1:24868121-24868140 MsG0180001662.01.T01:CDS 55.0%
TCTGGTCAAACTGCACGTGG+AGG + Chr1:24868124-24868143 MsG0180001662.01.T01:CDS 55.0%
TTCCACCGCTGCTGAAAGGT+GGG + Chr1:24867986-24868005 MsG0180001662.01.T01:intron 55.0%
TTTCCACCGCTGCTGAAAGG+TGG + Chr1:24867985-24868004 MsG0180001662.01.T01:intron 55.0%
ACGCACGTGCGAACTGTGAG+AGG - Chr1:24868677-24868696 None:intergenic 60.0%
ATCCCACCTTTCAGCAGCGG+TGG - Chr1:24867991-24868010 None:intergenic 60.0%
GGGGGATCGTTGTGCTGAAC+TGG + Chr1:24869431-24869450 MsG0180001662.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 24867870 24869956 24867870 ID=MsG0180001662.01;Name=MsG0180001662.01
Chr1 mRNA 24867870 24869956 24867870 ID=MsG0180001662.01.T01;Parent=MsG0180001662.01;Name=MsG0180001662.01.T01;_AED=0.34;_eAED=0.35;_QI=0|0|0|1|1|1|5|0|515
Chr1 exon 24867870 24868003 24867870 ID=MsG0180001662.01.T01:exon:40817;Parent=MsG0180001662.01.T01
Chr1 exon 24868102 24868581 24868102 ID=MsG0180001662.01.T01:exon:40818;Parent=MsG0180001662.01.T01
Chr1 exon 24868850 24869113 24868850 ID=MsG0180001662.01.T01:exon:40819;Parent=MsG0180001662.01.T01
Chr1 exon 24869208 24869382 24869208 ID=MsG0180001662.01.T01:exon:40820;Parent=MsG0180001662.01.T01
Chr1 exon 24869462 24869956 24869462 ID=MsG0180001662.01.T01:exon:40821;Parent=MsG0180001662.01.T01
Chr1 CDS 24867870 24868003 24867870 ID=MsG0180001662.01.T01:cds;Parent=MsG0180001662.01.T01
Chr1 CDS 24868102 24868581 24868102 ID=MsG0180001662.01.T01:cds;Parent=MsG0180001662.01.T01
Chr1 CDS 24868850 24869113 24868850 ID=MsG0180001662.01.T01:cds;Parent=MsG0180001662.01.T01
Chr1 CDS 24869208 24869382 24869208 ID=MsG0180001662.01.T01:cds;Parent=MsG0180001662.01.T01
Chr1 CDS 24869462 24869956 24869462 ID=MsG0180001662.01.T01:cds;Parent=MsG0180001662.01.T01
Gene Sequence

>MsG0180001662.01.T01

ATGTCTTCTAAGAAAGCTTCCTTAGTTACTGTTAATTCTCTTATGAGATTGTGCAATCGATGTTGTTCTCACCACGTTGCAAATTGTATCAAAGGGTCTAATACATCAAAGAATATTTCCACCGCTGCTGAAAGTTCAGAGCGAATTTATTATGGATCTGGTCAAACTGCACGTGGAGGACATGTAAATAATAATGTCACCCAGAATGTAGTTCAAAGTAATTTGGCAGAGCATAATGGAAGTGTCAATGGGGACTTTGGTCAAAGAAACTTCAAAATGCAACATAAAGTTGGGGTGGGTGTTGATAATTCAAGGGGCTTTGGGATGCATCCTTATGGTTCTTTTGAGAGACATGATTGGAGACTAGAATCCGGAGAAAAGATGAAGTATCCCAATTCACATAGTTTACTTAGGCCTATAGAGTATCAGGGACATCATGGGAACCTTACTCAAAACAGTGGTCGTTGTCAGCAGACTCCAAATATGAATACTCAAAACTCTGCTCCATATAAAGATAAACTTAACAAACTAGATGAATTTTGCAAGGAGGGTGAAGTGAAGAAAGCAATTGCTGTTTTGCAAGAGTTAGAAAAGCTTCATGCTTATGTGGATTTAAAGGTTCATATTCCTGTGGATTTGGATCGTTGTTTGCGATTAATGCAACAATGTGGGAAGGTTGAGTCTCTTGAAGAGTTAAAAGTTGTACACAGATATGTTTTACAACATTTGTCACCTCTTAAAGTCAGCACATGCAATGGAATATTGGAGATGTATTTTCAATGTGGTTCTGTAGATGCTGCAGTAAACGTGTTCAAGAACATGACTGAGCGCGATTTGACTACTATATATATTATGATAAAGCAGCTCGCCAAGAATGGTATGCTGGGAGATATTGTTGAGGGAATGCTACACTTTGAATCCATGAGTAGGGACTATGACATTGTACCAACTATGGCACATTATGTAAGTTTAGTAGACATGATTGGTAGTATTGGGAATCTTGATGAAGCCTTGGAGTTCATTGAAAAGATGCCAATGGAACCAAGTGTAGAGTTGGATCCATCTCGTTTAAATGAGAAATCAAAAGTTGGTCTTTTACTCATAGAAACTTCAGACATAACAAAAAACAAAAAGCAGAACAAATCACCAGACAATAATCTTAGCCGTATCCATGAATATCGAGCAGGAGATACTTCACTTCCAGAAAATAACATGATCTATACTTTGCTTAGACGTTTGAGGGTGCACATGAAAGAAGCTGGCTATGTTGCAGAGACAAGATTTTGTTTACATGACGTAGATCAAGAAGATAAAGAAGATGCTCTCCTTGGCCACAGTGAGAGACTTGCTATTGCTAAGGGTCTCCTTAACAGTCCTGCTCGTAGTACCATCAGAGTAATTAAGAATCTCCGTGTTTGTGGTGATTGTCATACTGCATTGAAGATTATTTCTGATCTTGTGGGAAGAGAATCATCATCCGAGATGCTAAAAGGTTCCATCATTTTAAAAATGGGCTATGCTCCTGCAGGGATTATTGGTGAACATTAA

Protein sequence

>MsG0180001662.01.T01

MSSKKASLVTVNSLMRLCNRCCSHHVANCIKGSNTSKNISTAAESSERIYYGSGQTARGGHVNNNVTQNVVQSNLAEHNGSVNGDFGQRNFKMQHKVGVGVDNSRGFGMHPYGSFERHDWRLESGEKMKYPNSHSLLRPIEYQGHHGNLTQNSGRCQQTPNMNTQNSAPYKDKLNKLDEFCKEGEVKKAIAVLQELEKLHAYVDLKVHIPVDLDRCLRLMQQCGKVESLEELKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDAAVNVFKNMTERDLTTIYIMIKQLAKNGMLGDIVEGMLHFESMSRDYDIVPTMAHYVSLVDMIGSIGNLDEALEFIEKMPMEPSVELDPSRLNEKSKVGLLLIETSDITKNKKQNKSPDNNLSRIHEYRAGDTSLPENNMIYTLLRRLRVHMKEAGYVAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLRVCGDCHTALKIISDLVGRESSSEMLKGSIILKMGYAPAGIIGEH*