AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022146.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022146.01.T02 MTR_4g084650 98.020 202 4 0 10 211 210 411 1.40e-141 401
MsG0480022146.01.T02 MTR_4g084650 98.780 164 2 0 10 173 210 373 4.84e-114 330
MsG0480022146.01.T02 MTR_1g090873 30.319 188 124 4 10 194 165 348 1.27e-22 94.4
MsG0480022146.01.T02 MTR_1g090873 32.934 167 105 4 13 176 168 330 1.03e-21 91.7
MsG0480022146.01.T01 MTR_4g084650 98.020 202 4 0 10 211 210 411 1.40e-141 401
MsG0480022146.01.T01 MTR_4g084650 98.780 164 2 0 10 173 210 373 4.84e-114 330
MsG0480022146.01.T01 MTR_1g090873 30.319 188 124 4 10 194 165 348 1.27e-22 94.4
MsG0480022146.01.T01 MTR_1g090873 32.934 167 105 4 13 176 168 330 1.03e-21 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022146.01.T02 AT5G50550 56.571 175 71 4 10 182 190 361 1.22e-58 189
MsG0480022146.01.T02 AT5G50650 56.571 175 71 4 10 182 190 361 1.22e-58 189
MsG0480022146.01.T02 AT2G01470 52.577 194 88 3 9 200 200 391 3.17e-58 188
MsG0480022146.01.T02 AT3G52190 27.717 184 128 3 13 193 173 354 3.49e-18 82.4
MsG0480022146.01.T01 AT5G50550 56.571 175 71 4 10 182 190 361 1.22e-58 189
MsG0480022146.01.T01 AT5G50650 56.571 175 71 4 10 182 190 361 1.22e-58 189
MsG0480022146.01.T01 AT2G01470 52.577 194 88 3 9 200 200 391 3.17e-58 188
MsG0480022146.01.T01 AT3G52190 27.717 184 128 3 13 193 173 354 3.49e-18 82.4

Find 15 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGTTTGGGATATCAATT+TGG 0.285256 4:-68899514 MsG0480022146.01.T01:three_prime_UTR
CAATCATGAGTAAAATTGTT+TGG 0.285270 4:-68899527 MsG0480022146.01.T01:three_prime_UTR
ATTATGGTGTTAAATTGTTA+TGG 0.295755 4:-68899577 MsG0480022146.01.T01:three_prime_UTR
CTCTGTAGATTGTATAATTA+TGG 0.316112 4:-68899593 MsG0480022146.01.T01:three_prime_UTR
TTTCAATTCCTTCAACCTTC+AGG 0.340231 4:+68899798 None:intergenic
AATCATGAGTAAAATTGTTT+GGG 0.352241 4:-68899526 MsG0480022146.01.T01:three_prime_UTR
TTCTGAGTGGTTGTACCATT+GGG 0.413763 4:-68899638 MsG0480022146.01.T01:three_prime_UTR
GCTTACTTCCTGAAGGTTGA+AGG 0.465391 4:-68899806 MsG0480022146.01.T01:CDS
ATTCTGAGTGGTTGTACCAT+TGG 0.471625 4:-68899639 MsG0480022146.01.T01:three_prime_UTR
ATTGTAGAAATATTTACTGC+TGG 0.478308 4:-68899750 MsG0480022146.01.T01:exon
AAGGAGGAGGACTGAGCTTG+TGG 0.545745 4:-68899862 MsG0480022146.01.T01:CDS
AATAGCTGCTTACTTCCTGA+AGG 0.563268 4:-68899813 MsG0480022146.01.T01:CDS
TTATACAATCTACAGAGCAT+TGG 0.565341 4:+68899599 None:intergenic
AGTAAGCAGCTATTGCAAGT+AGG 0.596054 4:+68899822 None:intergenic
GAGACATTATCATATCCCAA+TGG 0.664860 4:+68899623 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAATATATAAATAAA+GGG + Chr4:68902500-68902519 None:intergenic 0.0%
!! AATTCATAAAAATATTTAAC+TGG - Chr4:68903821-68903840 MsG0480022146.01.T01:CDS 10.0%
!! TAATAATATATCAAACTTAA+TGG + Chr4:68903516-68903535 None:intergenic 10.0%
!! TTATTTATTTAATATCATGT+TGG + Chr4:68901779-68901798 None:intergenic 10.0%
!! TTTACTTTATTATAAATGTT+GGG + Chr4:68899378-68899397 None:intergenic 10.0%
!!! AAACTAATTATTTTTCTTAT+GGG - Chr4:68903149-68903168 MsG0480022146.01.T01:intron 10.0%
!!! TAAACTAATTATTTTTCTTA+TGG - Chr4:68903148-68903167 MsG0480022146.01.T01:intron 10.0%
!!! TATATATTTTTTATGGAATT+TGG - Chr4:68902506-68902525 MsG0480022146.01.T01:intron 10.0%
!!! TTTTACTTTATTATAAATGT+TGG + Chr4:68899379-68899398 None:intergenic 10.0%
!! AAAAAACTATTCATAAATCT+TGG + Chr4:68903756-68903775 None:intergenic 15.0%
!! AAAAACTATTCATAAATCTT+GGG + Chr4:68903755-68903774 None:intergenic 15.0%
!! AAATGGAAGTAAAAAAATAA+TGG + Chr4:68902676-68902695 None:intergenic 15.0%
!! AACTAATATTACCTTATAAT+TGG + Chr4:68902732-68902751 None:intergenic 15.0%
!! AATAAAAAATTATGAAAGTG+TGG - Chr4:68901524-68901543 MsG0480022146.01.T01:intron 15.0%
!! GTATTAATTAGAATTATGTT+TGG - Chr4:68899236-68899255 MsG0480022146.01.T02:intron 15.0%
!! TAAGGATTAAATCAATTTAA+GGG + Chr4:68899905-68899924 None:intergenic 15.0%
!! TATTTAGTCTATATATAAAC+AGG - Chr4:68898220-68898239 MsG0480022146.01.T02:intron 15.0%
!! TGAAATTATCAATGAAATAT+AGG - Chr4:68901803-68901822 MsG0480022146.01.T01:intron 15.0%
!!! AACTAATTATTTTTCTTATG+GGG - Chr4:68903150-68903169 MsG0480022146.01.T01:intron 15.0%
!!! ATTTTTATCATGTGTATTAT+AGG + Chr4:68903127-68903146 None:intergenic 15.0%
!!! TAATGGAATATTTCTATTTT+AGG + Chr4:68902374-68902393 None:intergenic 15.0%
!!! TTATTGTTTTGTATAGATAA+AGG - Chr4:68899693-68899712 MsG0480022146.01.T01:three_prime_UTR 15.0%
!!! TTTTTTTTTTTTTTGATGTC+CGG + Chr4:68903615-68903634 None:intergenic 15.0%
!! AAAACAAAAGATGTAAGTTT+CGG + Chr4:68900902-68900921 None:intergenic 20.0%
!! AAGATGAATGAAAAGTTATT+AGG - Chr4:68903423-68903442 MsG0480022146.01.T01:intron 20.0%
!! AATCATGAGTAAAATTGTTT+GGG - Chr4:68902277-68902296 MsG0480022146.01.T01:intron 20.0%
!! AATTTAAGGGTCAATAATTA+GGG + Chr4:68899892-68899911 None:intergenic 20.0%
!! ATAATTGAAGAGAAGAAAAA+TGG - Chr4:68901185-68901204 MsG0480022146.01.T01:intron 20.0%
!! ATGTTTATTCTTTATTCTTC+TGG - Chr4:68900739-68900758 MsG0480022146.01.T01:intron 20.0%
!! GATATATATATTTCCACATT+TGG - Chr4:68901839-68901858 MsG0480022146.01.T01:intron 20.0%
!! GTAAGGATTAAATCAATTTA+AGG + Chr4:68899906-68899925 None:intergenic 20.0%
!! GTTATAAAATAAACCCATTT+GGG + Chr4:68903071-68903090 None:intergenic 20.0%
!! GTTCATGAATTCTTTATATT+TGG - Chr4:68899278-68899297 MsG0480022146.01.T02:intron 20.0%
!! TAAGGATTAAATCAATCTAA+GGG + Chr4:68900144-68900163 None:intergenic 20.0%
!! TAATGATGATTGTTACTAAT+TGG - Chr4:68898903-68898922 MsG0480022146.01.T02:intron 20.0%
!! TGAATACTTCTAAACATAAA+GGG + Chr4:68899182-68899201 None:intergenic 20.0%
!! TGGTGTAATGATTTATTTAT+GGG - Chr4:68902309-68902328 MsG0480022146.01.T01:intron 20.0%
!! TGTTATAAAATAAACCCATT+TGG + Chr4:68903072-68903091 None:intergenic 20.0%
!! TTGAATACTTCTAAACATAA+AGG + Chr4:68899183-68899202 None:intergenic 20.0%
!! TTGGTGTAATGATTTATTTA+TGG - Chr4:68902308-68902327 MsG0480022146.01.T01:intron 20.0%
!!! AAAAGTAAATTTTGCATAAC+TGG + Chr4:68902836-68902855 None:intergenic 20.0%
!!! AAGAGAACCTTATAATTTTA+AGG + Chr4:68902886-68902905 None:intergenic 20.0%
!!! AATTTGGTGTAATGATTTTA+TGG - Chr4:68902522-68902541 MsG0480022146.01.T01:intron 20.0%
!!! AGAAGTTATTTTTGATTTGA+TGG - Chr4:68898092-68898111 MsG0480022146.01.T02:intron 20.0%
!!! AGAGAACCTTATAATTTTAA+GGG + Chr4:68902885-68902904 None:intergenic 20.0%
!!! ATATACAGCAGAATTTTTTT+AGG + Chr4:68901706-68901725 None:intergenic 20.0%
!!! ATGTTTAGAAGTATTCAATA+TGG - Chr4:68899185-68899204 MsG0480022146.01.T02:intron 20.0%
!!! ATTATGGTGTTAAATTGTTA+TGG - Chr4:68902226-68902245 MsG0480022146.01.T01:CDS 20.0%
!!! CAAATGTAGAAACTTTTTAT+TGG + Chr4:68902452-68902471 None:intergenic 20.0%
!!! GATTAATTTGGCTTAAAATT+TGG - Chr4:68898152-68898171 MsG0480022146.01.T02:intron 20.0%
!!! GTTTCAAAACATACTTTTAT+TGG - Chr4:68898660-68898679 MsG0480022146.01.T02:intron 20.0%
!!! TAACACAAAAAAAGTCTTAT+TGG + Chr4:68903222-68903241 None:intergenic 20.0%
!!! TTAATACTACTAATTTGCTT+TGG + Chr4:68899223-68899242 None:intergenic 20.0%
!!! TTCATTTGCTTTATATTTTC+TGG - Chr4:68898689-68898708 MsG0480022146.01.T02:intron 20.0%
!!! TTTTGATAAATTCGAATAGT+TGG - Chr4:68903783-68903802 MsG0480022146.01.T01:CDS 20.0%
!!! TTTTGTATAGATAAAGGTTT+TGG - Chr4:68899699-68899718 MsG0480022146.01.T01:three_prime_UTR 20.0%
!!! TTTTTTTTTTTTTGATGTCC+GGG + Chr4:68903614-68903633 None:intergenic 20.0%
! AAAAAAATCTAGCAATGTGT+AGG + Chr4:68899944-68899963 None:intergenic 25.0%
! AAAAAAATCTTGCAATGTGT+AGG + Chr4:68900183-68900202 None:intergenic 25.0%
! AAAAAATCTAGCAATGTGTA+GGG + Chr4:68899943-68899962 None:intergenic 25.0%
! AAAAAATCTTGCAATGTGTA+GGG + Chr4:68900182-68900201 None:intergenic 25.0%
! AAAACATGGAAATCATATTG+AGG + Chr4:68899466-68899485 None:intergenic 25.0%
! AACAGTCTAATACTAATATC+AGG + Chr4:68901642-68901661 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG - Chr4:68898455-68898474 MsG0480022146.01.T02:intron 25.0%
! AATCTAAGGGTCAATAATTA+GGG + Chr4:68900131-68900150 None:intergenic 25.0%
! AATGAAAAGTTATTAGGACT+CGG - Chr4:68903429-68903448 MsG0480022146.01.T01:intron 25.0%
! AATGTAAACAGAAAAACTGT+CGG + Chr4:68899999-68900018 None:intergenic 25.0%
! AGATAGATGACTTAATGTTA+TGG - Chr4:68898748-68898767 MsG0480022146.01.T02:intron 25.0%
! AGGTAAAATTGAAAAATCAG+AGG + Chr4:68903659-68903678 None:intergenic 25.0%
! ATCCATGTTACATTATAAGT+CGG + Chr4:68902606-68902625 None:intergenic 25.0%
! ATGTAAAAGAGAAAGAGAAA+AGG + Chr4:68902566-68902585 None:intergenic 25.0%
! ATTGTAGAAATATTTACTGC+TGG - Chr4:68902053-68902072 MsG0480022146.01.T01:CDS 25.0%
! CAAATTTAATCAGTTGAACT+GGG + Chr4:68898952-68898971 None:intergenic 25.0%
! CAATCATGAGTAAAATTGTT+TGG - Chr4:68902276-68902295 MsG0480022146.01.T01:intron 25.0%
! CAATTTAAGGGTCAATAATT+AGG + Chr4:68899893-68899912 None:intergenic 25.0%
! CTACAACCCTTAAAATTATA+AGG - Chr4:68902876-68902895 MsG0480022146.01.T01:intron 25.0%
! CTCTGTAGATTGTATAATTA+TGG - Chr4:68902210-68902229 MsG0480022146.01.T01:CDS 25.0%
! GAAGTAGCTTAAGTAAAATA+CGG - Chr4:68901471-68901490 MsG0480022146.01.T01:intron 25.0%
! GATGCAATATTTAGATCTAT+AGG + Chr4:68900028-68900047 None:intergenic 25.0%
! GATTCAGACAATGATAAAAA+AGG - Chr4:68900987-68901006 MsG0480022146.01.T01:intron 25.0%
! GATTGAACAAGAAAATTGTT+TGG + Chr4:68903482-68903501 None:intergenic 25.0%
! GGACAATTATTATTCACTAT+TGG + Chr4:68900675-68900694 None:intergenic 25.0%
! GTAAGGATTAAATCAATCTA+AGG + Chr4:68900145-68900164 None:intergenic 25.0%
! GTAGCTTAAAAAAAAGACAA+TGG + Chr4:68900779-68900798 None:intergenic 25.0%
! GTATTTAAAAGGATTCCATA+GGG - Chr4:68901373-68901392 MsG0480022146.01.T01:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG + Chr4:68898495-68898514 None:intergenic 25.0%
! GTTGAATGCACAAATATTAA+TGG + Chr4:68902391-68902410 None:intergenic 25.0%
! TAAAGAATTCATGAACATGT+TGG + Chr4:68899274-68899293 None:intergenic 25.0%
! TATCCTAAAGTAACCTAAAA+AGG - Chr4:68899014-68899033 MsG0480022146.01.T02:intron 25.0%
! TCTACGTTAAAAGAGAAAAA+TGG + Chr4:68902693-68902712 None:intergenic 25.0%
! TTAAGCCAAATTAATCTTCA+AGG + Chr4:68898148-68898167 None:intergenic 25.0%
!! AATTGTTTGGGATATCAATT+TGG - Chr4:68902289-68902308 MsG0480022146.01.T01:intron 25.0%
!! AGATTTTCTCAAACAAATGA+TGG - Chr4:68899579-68899598 MsG0480022146.01.T01:three_prime_UTR 25.0%
!! ATTTAAAAGTAAGAAAGCAC+TGG - Chr4:68902793-68902812 MsG0480022146.01.T01:intron 25.0%
!! CTTTTCCTTGAAGATTAATT+TGG - Chr4:68898140-68898159 MsG0480022146.01.T02:intron 25.0%
!! GATTTTCTCAAACAAATGAT+GGG - Chr4:68899580-68899599 MsG0480022146.01.T01:three_prime_UTR 25.0%
!! TCTTTCTTTTAACATCTAGT+TGG - Chr4:68899399-68899418 MsG0480022146.01.T01:intron 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG + Chr4:68898448-68898467 None:intergenic 25.0%
!!! AGGTATTTTAGTCATAGTTT+TGG - Chr4:68901106-68901125 MsG0480022146.01.T01:intron 25.0%
!!! ATACCTTTTTAGGTTACTTT+AGG + Chr4:68899020-68899039 None:intergenic 25.0%
!!! GAAACTTACATCTTTTGTTT+TGG - Chr4:68900901-68900920 MsG0480022146.01.T01:intron 25.0%
!!! GCAATGTAATACTTTTTCAA+AGG - Chr4:68900812-68900831 MsG0480022146.01.T01:CDS 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - Chr4:68898313-68898332 MsG0480022146.01.T02:intron 25.0%
!!! TGCTTTCTTACTTTTAAATG+TGG + Chr4:68902792-68902811 None:intergenic 25.0%
!!! TGTTTTTTCTTGTTTTAAGG+AGG - Chr4:68901925-68901944 MsG0480022146.01.T01:intron 25.0%
!!! TTCCTTATTTTTCTATCCAT+TGG - Chr4:68901408-68901427 MsG0480022146.01.T01:intron 25.0%
!!! TTTGAAGCATTTCCATTTTT+GGG - Chr4:68902107-68902126 MsG0480022146.01.T01:intron 25.0%
AAACATTCACGTTGAAGTAT+TGG - Chr4:68899312-68899331 MsG0480022146.01.T01:intron 30.0%
AAATTGAAAAATCAGAGGCT+TGG + Chr4:68903654-68903673 None:intergenic 30.0%
AAGAACTTAAGTTCAATTCC+TGG + Chr4:68903330-68903349 None:intergenic 30.0%
AATAACTTCTTACACTAGTG+AGG + Chr4:68898082-68898101 None:intergenic 30.0%
AATATGCAAAATATGCAGTC+AGG + Chr4:68899154-68899173 None:intergenic 30.0%
AATCAAACAATTAGACTCGA+GGG + Chr4:68903387-68903406 None:intergenic 30.0%
ACAATTACAATATCTCCTTC+AGG + Chr4:68900949-68900968 None:intergenic 30.0%
AGAACTTAAGTTCAATTCCT+GGG + Chr4:68903329-68903348 None:intergenic 30.0%
ATACTTCAACGTGAATGTTT+AGG + Chr4:68899312-68899331 None:intergenic 30.0%
ATATGCAAAATATGCAGTCA+GGG + Chr4:68899153-68899172 None:intergenic 30.0%
ATGCAAAATGAGTCAAGTTT+AGG + Chr4:68898874-68898893 None:intergenic 30.0%
CAAAAATGGAAATGCTTCAA+AGG + Chr4:68902108-68902127 None:intergenic 30.0%
CAATCTAAGGGTCAATAATT+AGG + Chr4:68900132-68900151 None:intergenic 30.0%
CATGGTACATATTTAGACTT+TGG - Chr4:68899829-68899848 MsG0480022146.01.T01:CDS 30.0%
CTATCTATGAAAGAACATGT+AGG + Chr4:68898734-68898753 None:intergenic 30.0%
CTCCAATGGATAGAAAAATA+AGG + Chr4:68901413-68901432 None:intergenic 30.0%
CTTACTTTATGATCGAACTT+CGG + Chr4:68903281-68903300 None:intergenic 30.0%
GAAAAAATTCTTACTGCCTT+GGG - Chr4:68899421-68899440 MsG0480022146.01.T01:intron 30.0%
GATAGGAAAAAAGGATTACA+TGG + Chr4:68901305-68901324 None:intergenic 30.0%
GCAAATTTAATCAGTTGAAC+TGG + Chr4:68898953-68898972 None:intergenic 30.0%
GCATAATATATGTAAGACTG+AGG - Chr4:68903582-68903601 MsG0480022146.01.T01:intron 30.0%
GGGTACATAATATCATTGTA+AGG + Chr4:68899923-68899942 None:intergenic 30.0%
GGTATTTAAAAGGATTCCAT+AGG - Chr4:68901372-68901391 MsG0480022146.01.T01:intron 30.0%
GTTCAACTGATTAAATTTGC+TGG - Chr4:68898953-68898972 MsG0480022146.01.T02:intron 30.0%
TAAAATAAACCCATTTGGGT+TGG + Chr4:68903067-68903086 None:intergenic 30.0%
TAAGTAAAATACGGTAGCAT+TGG - Chr4:68901480-68901499 MsG0480022146.01.T01:intron 30.0%
TAATCAAACAATTAGACTCG+AGG + Chr4:68903388-68903407 None:intergenic 30.0%
TACATATTTAGACTTTGGCT+CGG - Chr4:68899834-68899853 MsG0480022146.01.T01:CDS 30.0%
TATTAAATCACCAGACTGAT+AGG + Chr4:68901322-68901341 None:intergenic 30.0%
TCATTACAAACCTTGAATCA+GGG + Chr4:68901047-68901066 None:intergenic 30.0%
TCATTCGTTCTCCAATTATA+AGG - Chr4:68902718-68902737 MsG0480022146.01.T01:intron 30.0%
TGCAAAATATATACCTGTTC+TGG + Chr4:68899628-68899647 None:intergenic 30.0%
TGCAAAATGAGTCAAGTTTA+GGG + Chr4:68898873-68898892 None:intergenic 30.0%
TGTAAATCAAGAACATGTGT+TGG + Chr4:68901249-68901268 None:intergenic 30.0%
TGTAAGAAGAGTAGATCAAA+TGG - Chr4:68898380-68898399 MsG0480022146.01.T02:intron 30.0%
TTATACAATCTACAGAGCAT+TGG + Chr4:68902207-68902226 None:intergenic 30.0%
TTCATTACAAACCTTGAATC+AGG + Chr4:68901048-68901067 None:intergenic 30.0%
TTCCGACTTATAATGTAACA+TGG - Chr4:68902601-68902620 MsG0480022146.01.T01:intron 30.0%
TTGATCTACTCTTCTTACAA+CGG + Chr4:68898379-68898398 None:intergenic 30.0%
TTTCATACACTACTACCAAA+TGG + Chr4:68901570-68901589 None:intergenic 30.0%
! AAAAGGTATAGAAGGTGAAT+TGG - Chr4:68899031-68899050 MsG0480022146.01.T02:intron 30.0%
! AACATTCACGTTGAAGTATT+GGG - Chr4:68899313-68899332 MsG0480022146.01.T01:intron 30.0%
! AAGTGATGACTTAACTTTTG+TGG - Chr4:68900845-68900864 MsG0480022146.01.T01:CDS 30.0%
! AGAGAGTTGTTTAGAGATTT+TGG - Chr4:68900600-68900619 MsG0480022146.01.T01:intron 30.0%
! CTTTTGAACAATTTGTCCTT+TGG - Chr4:68903347-68903366 MsG0480022146.01.T01:intron 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + Chr4:68898460-68898479 None:intergenic 30.0%
! GAGAGTTGTTTAGAGATTTT+GGG - Chr4:68900601-68900620 MsG0480022146.01.T01:intron 30.0%
! GTAACCTAAAAAGGTATAGA+AGG - Chr4:68899023-68899042 MsG0480022146.01.T02:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + Chr4:68898438-68898457 None:intergenic 30.0%
! TCTACCAACTTTTCTACTAT+AGG + Chr4:68898309-68898328 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG - Chr4:68898499-68898518 MsG0480022146.01.T02:intron 30.0%
! TGTATTTTCATCATTCTGAG+TGG - Chr4:68902152-68902171 MsG0480022146.01.T01:intron 30.0%
! TTCACCTTCTATACCTTTTT+AGG + Chr4:68899030-68899049 None:intergenic 30.0%
!! AATGAGTCAACTTTTTCTGT+TGG - Chr4:68901728-68901747 MsG0480022146.01.T01:intron 30.0%
!! CTTATTTTTCTATCCATTGG+AGG - Chr4:68901411-68901430 MsG0480022146.01.T01:intron 30.0%
!! GTTGTTGGCTCTAAAATATT+TGG + Chr4:68899104-68899123 None:intergenic 30.0%
!! TAAACATGTAGCTGTTTCTA+TGG + Chr4:68900726-68900745 None:intergenic 30.0%
!! TTGAAGCATTTCCATTTTTG+GGG - Chr4:68902108-68902127 MsG0480022146.01.T01:intron 30.0%
!!! ACTTACATCTTTTGTTTTGG+TGG - Chr4:68900904-68900923 MsG0480022146.01.T01:intron 30.0%
!!! AGTTTTGGCTTCTATATTCA+GGG - Chr4:68901121-68901140 MsG0480022146.01.T01:intron 30.0%
!!! CTTTGAAGCATTTCCATTTT+TGG - Chr4:68902106-68902125 MsG0480022146.01.T01:intron 30.0%
!!! TAGTTTTGGCTTCTATATTC+AGG - Chr4:68901120-68901139 MsG0480022146.01.T01:intron 30.0%
!!! TGTCTTTTTTTTAAGCTACC+TGG - Chr4:68900780-68900799 MsG0480022146.01.T01:CDS 30.0%
!!! TTTTTCTTGTTTTAAGGAGG+AGG - Chr4:68901928-68901947 MsG0480022146.01.T01:intron 30.0%
AAGAAGAGTAGATCAAATGG+AGG - Chr4:68898383-68898402 MsG0480022146.01.T02:intron 35.0%
ACTGTTTATGCTCTGTTTGA+AGG - Chr4:68901086-68901105 MsG0480022146.01.T01:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG - Chr4:68898467-68898486 MsG0480022146.01.T02:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - Chr4:68898302-68898321 MsG0480022146.01.T02:intron 35.0%
AGCATGTCTGTCTTTATAGA+TGG - Chr4:68901676-68901695 MsG0480022146.01.T01:intron 35.0%
ATCAAACAATTAGACTCGAG+GGG + Chr4:68903386-68903405 None:intergenic 35.0%
ATCGATGAAACATCCAAATG+TGG + Chr4:68901855-68901874 None:intergenic 35.0%
ATGATAAAAAAGGCTCACCT+TGG - Chr4:68900997-68901016 MsG0480022146.01.T01:intron 35.0%
CATTACAAACCTTGAATCAG+GGG + Chr4:68901046-68901065 None:intergenic 35.0%
GAAAATAGGCTTAGATGGTT+TGG - Chr4:68898327-68898346 MsG0480022146.01.T02:intron 35.0%
GAGACATTATCATATCCCAA+TGG + Chr4:68902183-68902202 None:intergenic 35.0%
GAGACATTGAATGCACATAT+TGG + Chr4:68899789-68899808 None:intergenic 35.0%
GGAAAAAATTCTTACTGCCT+TGG - Chr4:68899420-68899439 MsG0480022146.01.T01:intron 35.0%
TATAAATCATCACCACGTTC+AGG + Chr4:68901595-68901614 None:intergenic 35.0%
TATCAACTGAGCTTAGCTTA+CGG + Chr4:68903554-68903573 None:intergenic 35.0%
TATTCTTCTGGTACTTGCAA+TGG - Chr4:68900751-68900770 MsG0480022146.01.T01:intron 35.0%
TCGACAGACAATCTGAATAA+AGG + Chr4:68903679-68903698 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - Chr4:68898322-68898341 MsG0480022146.01.T02:intron 35.0%
TGTTAACCATCCAGTTCATA+GGG - Chr4:68903237-68903256 MsG0480022146.01.T01:intron 35.0%
TTGAACAATTTGTCCTTTGG+TGG - Chr4:68903350-68903369 MsG0480022146.01.T01:intron 35.0%
TTTCAATTCCTTCAACCTTC+AGG + Chr4:68902008-68902027 None:intergenic 35.0%
! AATCAACAGCACTGAAAACA+TGG + Chr4:68899480-68899499 None:intergenic 35.0%
! AGTTGTTTAGAGATTTTGGG+AGG - Chr4:68900604-68900623 MsG0480022146.01.T01:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - Chr4:68898479-68898498 MsG0480022146.01.T02:intron 35.0%
! GTTTCTACATTTGACTCGTT+AGG - Chr4:68902459-68902478 MsG0480022146.01.T01:intron 35.0%
! TAAGCTAAGCTCAGTTGATA+GGG - Chr4:68903554-68903573 MsG0480022146.01.T01:intron 35.0%
! TAGTAGATGACATGTTGACT+TGG - Chr4:68898797-68898816 MsG0480022146.01.T02:intron 35.0%
! TTCATCGATTGTGTATCAAG+TGG - Chr4:68901866-68901885 MsG0480022146.01.T01:intron 35.0%
!! AGTTGATGGGTGAAATAAAG+GGG - Chr4:68899063-68899082 MsG0480022146.01.T02:intron 35.0%
!! GAGTTGATGGGTGAAATAAA+GGG - Chr4:68899062-68899081 MsG0480022146.01.T02:intron 35.0%
!! TGAAGCATTTCCATTTTTGG+GGG - Chr4:68902109-68902128 MsG0480022146.01.T01:intron 35.0%
!! TTAAATTTGCTGGTCTACTC+TGG - Chr4:68898963-68898982 MsG0480022146.01.T02:intron 35.0%
!!! ATCCTTTTTTCCTATCAGTC+TGG - Chr4:68901309-68901328 MsG0480022146.01.T01:intron 35.0%
AATAGCTGCTTACTTCCTGA+AGG - Chr4:68901990-68902009 MsG0480022146.01.T01:intron 40.0%
AGTAAGCAGCTATTGCAAGT+AGG + Chr4:68901984-68902003 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - Chr4:68898408-68898427 MsG0480022146.01.T02:intron 40.0%
AGTGCATTGTAGAGACCATT+TGG - Chr4:68901552-68901571 MsG0480022146.01.T01:intron 40.0%
ATAAAGGGGATAAGGAGGTT+AGG - Chr4:68899077-68899096 MsG0480022146.01.T02:intron 40.0%
ATCAACTGAGCTTAGCTTAC+GGG + Chr4:68903553-68903572 None:intergenic 40.0%
ATTCTGAGTGGTTGTACCAT+TGG - Chr4:68902164-68902183 MsG0480022146.01.T01:intron 40.0%
CAAGTTTAGGGAAAACAAGC+TGG + Chr4:68898861-68898880 None:intergenic 40.0%
CACCAGACTGATAGGAAAAA+AGG + Chr4:68901314-68901333 None:intergenic 40.0%
CACTAAACTTCCCCCAAAAA+TGG + Chr4:68902122-68902141 None:intergenic 40.0%
CATCCAGTTCATAGGGAAAA+TGG - Chr4:68903244-68903263 MsG0480022146.01.T01:intron 40.0%
CTATATATTGCTGCCAGAAC+AGG - Chr4:68899612-68899631 MsG0480022146.01.T01:three_prime_UTR 40.0%
CTGTTCTGGCAGCAATATAT+AGG + Chr4:68899614-68899633 None:intergenic 40.0%
GAACATGTTCATTCTCCCTA+TGG + Chr4:68901391-68901410 None:intergenic 40.0%
GACCTGGAATACACAAACAT+GGG - Chr4:68899731-68899750 MsG0480022146.01.T01:three_prime_UTR 40.0%
GGAATACACAAACATGGGAA+AGG - Chr4:68899736-68899755 MsG0480022146.01.T01:three_prime_UTR 40.0%
GTAAGCTAAGCTCAGTTGAT+AGG - Chr4:68903553-68903572 MsG0480022146.01.T01:intron 40.0%
GTGAAATAAAGGGGATAAGG+AGG - Chr4:68899072-68899091 MsG0480022146.01.T02:intron 40.0%
GTGTTAACCATCCAGTTCAT+AGG - Chr4:68903236-68903255 MsG0480022146.01.T01:intron 40.0%
TAGACTTGACTAGACAGGAT+AGG - Chr4:68898244-68898263 MsG0480022146.01.T02:intron 40.0%
TCGGTAAAAATGCACTCTTG+AGG + Chr4:68900883-68900902 None:intergenic 40.0%
TCTCCGATGTCAATTTGAGT+GGG + Chr4:68902983-68903002 None:intergenic 40.0%
TCTTCTTACAACGGCATCTA+TGG + Chr4:68898370-68898389 None:intergenic 40.0%
TGACCTGGAATACACAAACA+TGG - Chr4:68899730-68899749 MsG0480022146.01.T01:three_prime_UTR 40.0%
TGACTAGACAGGATAGGATT+AGG - Chr4:68898250-68898269 MsG0480022146.01.T02:intron 40.0%
TGGGTGAAATAAAGGGGATA+AGG - Chr4:68899069-68899088 MsG0480022146.01.T02:intron 40.0%
TGTCAAGAATTGTTTCACCC+AGG - Chr4:68903309-68903328 MsG0480022146.01.T01:intron 40.0%
TTATTTCACCCATCAACTCC+AGG + Chr4:68899061-68899080 None:intergenic 40.0%
TTCCCATGTTTGTGTATTCC+AGG + Chr4:68899736-68899755 None:intergenic 40.0%
TTCTGAGTGGTTGTACCATT+GGG - Chr4:68902165-68902184 MsG0480022146.01.T01:intron 40.0%
! AAGTTGATTGTCTCTTTGGG+AGG - Chr4:68897971-68897990 MsG0480022146.01.T02:intron 40.0%
! ATGAACGAGAGGGATTTTGA+AGG - Chr4:68900550-68900569 MsG0480022146.01.T01:intron 40.0%
! ATTGTTAGAGCATCTCGGAT+GGG - Chr4:68901349-68901368 MsG0480022146.01.T01:intron 40.0%
! CATTTTCCCTATGAACTGGA+TGG + Chr4:68903246-68903265 None:intergenic 40.0%
! CCTTGATTGTTAGAGCATCT+CGG - Chr4:68901344-68901363 MsG0480022146.01.T01:intron 40.0%
! GATCCATTTTCCCTATGAAC+TGG + Chr4:68903250-68903269 None:intergenic 40.0%
! GCAATTAACTTTGCCACTTC+AGG + Chr4:68901439-68901458 None:intergenic 40.0%
! TAGCATTTTCCCCTGATTCA+AGG - Chr4:68901034-68901053 MsG0480022146.01.T01:intron 40.0%
! TCAAACAAATGATGGGACTC+AGG - Chr4:68899587-68899606 MsG0480022146.01.T01:three_prime_UTR 40.0%
!! AAGCTAAGCTCAGTTGATAG+GGG - Chr4:68903555-68903574 MsG0480022146.01.T01:intron 40.0%
!! ACATGTAGCTGTTTCTATGG+AGG + Chr4:68900723-68900742 None:intergenic 40.0%
!! CTTGTTAACTTGTGCCCTAA+GGG - Chr4:68902333-68902352 MsG0480022146.01.T01:intron 40.0%
!! GGAGTTGATGGGTGAAATAA+AGG - Chr4:68899061-68899080 MsG0480022146.01.T02:intron 40.0%
!! GGATTTTGAAGGTGGTGTTA+TGG - Chr4:68900561-68900580 MsG0480022146.01.T01:intron 40.0%
!! GGCAAGTTGATTGTCTCTTT+GGG - Chr4:68897968-68897987 MsG0480022146.01.T02:intron 40.0%
!! TAGATGACATGTTGACTTGG+TGG - Chr4:68898800-68898819 MsG0480022146.01.T02:intron 40.0%
!! TCTTGTTAACTTGTGCCCTA+AGG - Chr4:68902332-68902351 MsG0480022146.01.T01:intron 40.0%
!! TGGCAAGTTGATTGTCTCTT+TGG - Chr4:68897967-68897986 MsG0480022146.01.T02:intron 40.0%
!! TTGGTTTTCCTGGAGTTGAT+GGG - Chr4:68899050-68899069 MsG0480022146.01.T02:intron 40.0%
!!! AGAAGGTGAATTGGTTTTCC+TGG - Chr4:68899040-68899059 MsG0480022146.01.T02:intron 40.0%
!!! ATTGGTTTTCCTGGAGTTGA+TGG - Chr4:68899049-68899068 MsG0480022146.01.T02:intron 40.0%
!!! TTTTGAAGGTGGTGTTATGG+TGG - Chr4:68900564-68900583 MsG0480022146.01.T01:intron 40.0%
AAATCAGAGGCTTGGAGAGT+AGG + Chr4:68903646-68903665 None:intergenic 45.0%
AATGCACTCTTGAGGTCTGA+AGG + Chr4:68900875-68900894 None:intergenic 45.0%
ACACCATTAGAGAGAGAGTG+GGG - Chr4:68898277-68898296 MsG0480022146.01.T02:intron 45.0%
AGATCAAATGGAGGAGAGTC+AGG - Chr4:68898392-68898411 MsG0480022146.01.T02:intron 45.0%
ATCCATGGATTCAAGTGCGA+GGG - Chr4:68901157-68901176 MsG0480022146.01.T01:intron 45.0%
ATTGCTTAACGTGTGCCCTT+AGG + Chr4:68902351-68902370 None:intergenic 45.0%
CAGCCCACTCAAATTGACAT+CGG - Chr4:68902977-68902996 MsG0480022146.01.T01:intron 45.0%
CAGGATAGACTTGACTAGAC+AGG - Chr4:68898239-68898258 MsG0480022146.01.T02:intron 45.0%
CCGAGATGCTCTAACAATCA+AGG + Chr4:68901347-68901366 None:intergenic 45.0%
CTAAAGCAGTTACTACGCCA+AGG + Chr4:68901017-68901036 None:intergenic 45.0%
CTCAGCTGATGGAAAGTTTC+TGG - Chr4:68899806-68899825 MsG0480022146.01.T01:CDS 45.0%
CTCTCCGATGTCAATTTGAG+TGG + Chr4:68902984-68903003 None:intergenic 45.0%
GAATCGAACCTGAGACTTCA+AGG - Chr4:68903003-68903022 MsG0480022146.01.T01:intron 45.0%
GACACCATTAGAGAGAGAGT+GGG - Chr4:68898276-68898295 MsG0480022146.01.T02:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - Chr4:68898402-68898421 MsG0480022146.01.T02:intron 45.0%
GCATTCAATGTCTCAGCTGA+TGG - Chr4:68899795-68899814 MsG0480022146.01.T01:CDS 45.0%
GCTTACTTCCTGAAGGTTGA+AGG - Chr4:68901997-68902016 MsG0480022146.01.T01:CDS 45.0%
GGCTTCTATATTCAGGGCAT+TGG - Chr4:68901127-68901146 MsG0480022146.01.T01:intron 45.0%
GGGTTAATGAACTCCACCAA+AGG + Chr4:68903366-68903385 None:intergenic 45.0%
GTAAGACTGAGGTTGAATCC+CGG - Chr4:68903593-68903612 MsG0480022146.01.T01:intron 45.0%
GTCAAACATGTGGTTCACTG+TGG + Chr4:68900696-68900715 None:intergenic 45.0%
GTGTATGAAACTCCTGAACG+TGG - Chr4:68901580-68901599 MsG0480022146.01.T01:intron 45.0%
GTTAAGCAACAGTGTGCTTG+TGG - Chr4:68900048-68900067 MsG0480022146.01.T01:intron 45.0%
TAATTGGTCAGACCAGCATG+CGG - Chr4:68898919-68898938 MsG0480022146.01.T02:intron 45.0%
TATCCATGGATTCAAGTGCG+AGG - Chr4:68901156-68901175 MsG0480022146.01.T01:intron 45.0%
TCAACTGAGCTTAGCTTACG+GGG + Chr4:68903552-68903571 None:intergenic 45.0%
TGACACCATTAGAGAGAGAG+TGG - Chr4:68898275-68898294 MsG0480022146.01.T02:intron 45.0%
TGGAGGACAAGTCAAACATG+TGG + Chr4:68900706-68900725 None:intergenic 45.0%
TTAAGCTACCTGGAAGCAAG+TGG - Chr4:68900790-68900809 MsG0480022146.01.T01:CDS 45.0%
TTGCTTAACGTGTGCCCTTA+GGG + Chr4:68902350-68902369 None:intergenic 45.0%
TTTGGGAGGAATAACGTGTG+TGG - Chr4:68900618-68900637 MsG0480022146.01.T01:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr4:68898548-68898567 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr4:68898549-68898568 None:intergenic 45.0%
! GATTGTTAGAGCATCTCGGA+TGG - Chr4:68901348-68901367 MsG0480022146.01.T01:intron 45.0%
! TGTCTGTCTTGCAGTTCTGA+TGG - Chr4:68897947-68897966 MsG0480022146.01.T02:intron 45.0%
! TTACATTGCCACTTGCTTCC+AGG + Chr4:68900801-68900820 None:intergenic 45.0%
! TTGATTGTCTCTTTGGGAGG+TGG - Chr4:68897974-68897993 MsG0480022146.01.T02:intron 45.0%
! TTGTTAGAGCATCTCGGATG+GGG - Chr4:68901350-68901369 MsG0480022146.01.T01:intron 45.0%
! TTTGGTGGCTTGATATGCAG+CGG - Chr4:68900919-68900938 MsG0480022146.01.T01:intron 45.0%
!! AAAGCACTGGCAAGTGTTCT+CGG - Chr4:68902806-68902825 MsG0480022146.01.T01:intron 45.0%
!! AACGAGAGGGATTTTGAAGG+TGG - Chr4:68900553-68900572 MsG0480022146.01.T01:intron 45.0%
!! CTCGGATGGGGGTATTTAAA+AGG - Chr4:68901362-68901381 MsG0480022146.01.T01:intron 45.0%
!! CTGATGGAAAGTTTCTGGCA+TGG - Chr4:68899811-68899830 MsG0480022146.01.T01:CDS 45.0%
!! GTGGTATTGGCTTGGAATCT+GGG + Chr4:68903040-68903059 None:intergenic 45.0%
!! TAAACCCATTTGGGTTGGTC+TGG + Chr4:68903062-68903081 None:intergenic 45.0%
!! TTTAGACTTTGGCTCGGTTG+AGG - Chr4:68899840-68899859 MsG0480022146.01.T01:CDS 45.0%
!!! GTTTTGGAAGCATTGTGACC+TGG - Chr4:68899715-68899734 MsG0480022146.01.T01:three_prime_UTR 45.0%
!! AAATAAATAATTCTATAAAA+AGG + Chr4:68902924-68902943 None:intergenic 5.0%
!! CATAAAAAATATATAAATAA+AGG + Chr4:68902501-68902520 None:intergenic 5.0%
!!! CTTTATTTATATATTTTTTA+TGG - Chr4:68902499-68902518 MsG0480022146.01.T01:intron 5.0%
AAACATCCCAAACCCTGCAG+GGG + Chr4:68898003-68898022 None:intergenic 50.0%
AATTGGTCAGACCAGCATGC+GGG - Chr4:68898920-68898939 MsG0480022146.01.T02:intron 50.0%
ACAATGGGGTCATGTGCCAT+AGG + Chr4:68901897-68901916 None:intergenic 50.0%
ACCACCAGACCAACCCAAAT+GGG - Chr4:68903055-68903074 MsG0480022146.01.T01:intron 50.0%
AGAAACATCCCAAACCCTGC+AGG + Chr4:68898005-68898024 None:intergenic 50.0%
ATATGCAGCGGAACACCTGA+AGG - Chr4:68900931-68900950 MsG0480022146.01.T01:intron 50.0%
CACCATTAGAGAGAGAGTGG+GGG - Chr4:68898278-68898297 MsG0480022146.01.T02:intron 50.0%
CATATTCCCATGTTCGCCCA+AGG + Chr4:68899440-68899459 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr4:68898547-68898566 MsG0480022146.01.T02:intron 50.0%
CGATTGTGTATCAAGTGGCG+TGG - Chr4:68901871-68901890 MsG0480022146.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr4:68898544-68898563 None:intergenic 50.0%
CTTGGGCGAACATGGGAATA+TGG - Chr4:68899438-68899457 MsG0480022146.01.T01:intron 50.0%
GAAACATCCCAAACCCTGCA+GGG + Chr4:68898004-68898023 None:intergenic 50.0%
GCAGTCAGGGCTTGTAACAA+GGG + Chr4:68899140-68899159 None:intergenic 50.0%
GGCTTGTAACAAGGGAAGGA+GGG + Chr4:68899132-68899151 None:intergenic 50.0%
GTGCTTGTGGATGAACGAGA+GGG - Chr4:68900061-68900080 MsG0480022146.01.T01:intron 50.0%
TACCACCAGACCAACCCAAA+TGG - Chr4:68903054-68903073 MsG0480022146.01.T01:intron 50.0%
TACCCCCACTCTCTCTCTAA+TGG + Chr4:68898283-68898302 None:intergenic 50.0%
TACCCTCGCACTTGAATCCA+TGG + Chr4:68901162-68901181 None:intergenic 50.0%
TCAGGGCTTGTAACAAGGGA+AGG + Chr4:68899136-68899155 None:intergenic 50.0%
TCCATTGGAGGAACCTGAAG+TGG - Chr4:68901423-68901442 MsG0480022146.01.T01:intron 50.0%
TCGAACCTGAGACTTCAAGG+AGG - Chr4:68903006-68903025 MsG0480022146.01.T01:intron 50.0%
TGCAGTCAGGGCTTGTAACA+AGG + Chr4:68899141-68899160 None:intergenic 50.0%
TGGATGAACGAGAGGGACTT+TGG - Chr4:68900068-68900087 MsG0480022146.01.T01:intron 50.0%
TGTGCTTGTGGATGAACGAG+AGG - Chr4:68900060-68900079 MsG0480022146.01.T01:intron 50.0%
TTACTGCCTTGGGCGAACAT+GGG - Chr4:68899431-68899450 MsG0480022146.01.T01:intron 50.0%
! ATTGTCTCTTTGGGAGGTGG+CGG - Chr4:68897977-68897996 MsG0480022146.01.T02:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr4:68898550-68898569 None:intergenic 50.0%
! GGAAGGAGGGAGTATGTTGT+TGG + Chr4:68899119-68899138 None:intergenic 50.0%
! TGTTAGAGCATCTCGGATGG+GGG - Chr4:68901351-68901370 MsG0480022146.01.T01:intron 50.0%
!! GGCATTGGCTTCTGTATCCA+TGG - Chr4:68901142-68901161 MsG0480022146.01.T01:intron 50.0%
!! GGTGGTATTGGCTTGGAATC+TGG + Chr4:68903041-68903060 None:intergenic 50.0%
!! GTGTTATGGTGGACAGTGAG+TGG - Chr4:68900575-68900594 MsG0480022146.01.T01:intron 50.0%
!! TTGGGTTGGTCTGGTGGTAT+TGG + Chr4:68903053-68903072 None:intergenic 50.0%
!! TTGGTCTGGTGGTATTGGCT+TGG + Chr4:68903048-68903067 None:intergenic 50.0%
AACAAGCTGGTTGCCAGTGC+TGG + Chr4:68898848-68898867 None:intergenic 55.0%
AAGGAGGAGGACTGAGCTTG+TGG - Chr4:68901941-68901960 MsG0480022146.01.T01:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + Chr4:68898536-68898555 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - Chr4:68898535-68898554 MsG0480022146.01.T02:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr4:68898542-68898561 MsG0480022146.01.T02:intron 55.0%
CTTACTGCCTTGGGCGAACA+TGG - Chr4:68899430-68899449 MsG0480022146.01.T01:intron 55.0%
GAACGAGAGGGACTTTGGCT+AGG - Chr4:68900073-68900092 MsG0480022146.01.T01:intron 55.0%
GAGGGACTTTGGCTAGGTTG+AGG - Chr4:68900079-68900098 MsG0480022146.01.T01:intron 55.0%
GGGCTTGTAACAAGGGAAGG+AGG + Chr4:68899133-68899152 None:intergenic 55.0%
GTATCAAGTGGCGTGGCCTA+TGG - Chr4:68901878-68901897 MsG0480022146.01.T01:intron 55.0%
GTGCTCCTCCTTGAAGTCTC+AGG + Chr4:68903014-68903033 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - Chr4:68898536-68898555 MsG0480022146.01.T02:intron 55.0%
TTGAACCGTCAGACCAGCAC+TGG - Chr4:68898832-68898851 MsG0480022146.01.T02:intron 55.0%
! GCCACTTCAGGTTCCTCCAA+TGG + Chr4:68901427-68901446 None:intergenic 55.0%
!! ACCCATTTGGGTTGGTCTGG+TGG + Chr4:68903059-68903078 None:intergenic 55.0%
!! GGTTGCCAGTGCTGGTCTGA+CGG + Chr4:68898840-68898859 None:intergenic 60.0%
CTGGGAATCTGCCCGCATGC+TGG + Chr4:68898934-68898953 None:intergenic 65.0%
TGGCGGCCCCTGCAGGGTTT+GGG - Chr4:68897994-68898013 MsG0480022146.01.T02:intron 70.0%
GTGGCGGCCCCTGCAGGGTT+TGG - Chr4:68897993-68898012 MsG0480022146.01.T02:intron 75.0%
!! GGGAGGTGGCGGCCCCTGCA+GGG - Chr4:68897988-68898007 MsG0480022146.01.T02:intron 80.0%
!! TGGGAGGTGGCGGCCCCTGC+AGG - Chr4:68897987-68898006 MsG0480022146.01.T02:intron 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 68897923 68903902 68897923 ID=MsG0480022146.01;Name=MsG0480022146.01
Chr4 mRNA 68899282 68903902 68899282 ID=MsG0480022146.01.T01;Parent=MsG0480022146.01;Name=MsG0480022146.01.T01;_AED=0.49;_eAED=0.50;_QI=0|1|0.85|1|0.66|0.57|7|309|211
Chr4 exon 68899282 68899323 68899282 ID=MsG0480022146.01.T01:exon:31308;Parent=MsG0480022146.01.T01
Chr4 exon 68899499 68899881 68899499 ID=MsG0480022146.01.T01:exon:31307;Parent=MsG0480022146.01.T01
Chr4 CDS 68903765 68903902 68903765 ID=MsG0480022146.01.T01:cds;Parent=MsG0480022146.01.T01
Chr4 CDS 68902192 68902267 68902192 ID=MsG0480022146.01.T01:cds;Parent=MsG0480022146.01.T01
Chr4 CDS 68901993 68902116 68901993 ID=MsG0480022146.01.T01:cds;Parent=MsG0480022146.01.T01
Chr4 CDS 68900770 68900886 68900770 ID=MsG0480022146.01.T01:cds;Parent=MsG0480022146.01.T01
Chr4 CDS 68900619 68900683 68900619 ID=MsG0480022146.01.T01:cds;Parent=MsG0480022146.01.T01
Chr4 CDS 68899766 68899881 68899766 ID=MsG0480022146.01.T01:cds;Parent=MsG0480022146.01.T01
Chr4 three_prime_UTR 68899499 68899765 68899499 ID=MsG0480022146.01.T01:three_prime_utr;Parent=MsG0480022146.01.T01
Chr4 three_prime_UTR 68899282 68899323 68899282 ID=MsG0480022146.01.T01:three_prime_utr;Parent=MsG0480022146.01.T01
Chr4 mRNA 68897923 68903902 68897923 ID=MsG0480022146.01.T02;Parent=MsG0480022146.01;Name=MsG0480022146.01.T02;_AED=0.49;_eAED=0.50;_QI=0|1|0.85|1|0.66|0.57|7|268|211
Chr4 exon 68897923 68897959 68897923 ID=MsG0480022146.01.T02:exon:31310;Parent=MsG0480022146.01.T02
Chr4 exon 68899535 68899881 68899535 ID=MsG0480022146.01.T02:exon:31309;Parent=MsG0480022146.01.T02
Chr4 CDS 68903765 68903902 68903765 ID=MsG0480022146.01.T02:cds;Parent=MsG0480022146.01.T02
Chr4 CDS 68902192 68902267 68902192 ID=MsG0480022146.01.T02:cds;Parent=MsG0480022146.01.T02
Chr4 CDS 68901993 68902116 68901993 ID=MsG0480022146.01.T02:cds;Parent=MsG0480022146.01.T02
Chr4 CDS 68900770 68900886 68900770 ID=MsG0480022146.01.T02:cds;Parent=MsG0480022146.01.T02
Chr4 CDS 68900619 68900683 68900619 ID=MsG0480022146.01.T02:cds;Parent=MsG0480022146.01.T02
Chr4 CDS 68899766 68899881 68899766 ID=MsG0480022146.01.T02:cds;Parent=MsG0480022146.01.T02
Chr4 three_prime_UTR 68899535 68899765 68899535 ID=MsG0480022146.01.T02:three_prime_utr;Parent=MsG0480022146.01.T02
Chr4 three_prime_UTR 68897923 68897959 68897923 ID=MsG0480022146.01.T02:three_prime_utr;Parent=MsG0480022146.01.T02
Gene Sequence

>MsG0480022146.01.T02

ATGGATTGTGGCTTAGTCTGGTTTTGTCTGTCTTGCAGTTCTGATGGCAAGTTGATTGTCTCTTTGGGAGGTGGCGGCCCCTGCAGGGTTTGGGATGTTTCTTCAGCAATCGTCTTAGCTACTCTAGCAAATGAAAATCGTGAAAATTTTAGCTCTTGCAGATTTTCTCAAACAAATGATGGGACTCAGGTCCTATATATTGCTGCCAGAACAGATAAAGGTTTTGGAAGCATTGTGACCTGGAATACACAAACATGGGAAAGGATTAGTTCAAAGCATATTTTGCGCGATCCAATATGTGCATTCAATGTCTCAGCTGATGGAAAGTTTCTGGCATGCGGAACACCTGAAGGAGATATTGTAATTGTAAATTCAACAAATATGCAGATTCAGACAATGATAAAAAAGGCTCACCTTGGCGTAGTAACTGCTTTAGCATTTTCCCCTGATTCAAGGGCATTGGCTTCTGTATCCATGGATTCAAGTGCGAGGGTAACAATAATTGAAGAGAAGAAAAATGGAGGAGGACTGAGCTTGTGGATTGCAATATTTATCATCCTACTTGCAATAGCTGCTTACTTCCTGAAGGTTGAAGGAATTGAAAAGTTAAAGCTTCAATATTACAATCAATTGTAG

>MsG0480022146.01.T01

ATGGATTGTGGCTTAGTCTGGTTTTGTCTGTCTTGCAGTTCTGATGGCAAGTTGATTGTCTCTTTGGGAGGTGGCGGCCCCTGCAGGGTTTGGGATGTTTCTTCAGCAATCGTCTTAGCTACTCTAGCAAATGAAAATCGTGAAAATTTTAGCTCTTGCAGATTTTCTCAAACAAATGATGGGACTCAGGTCCTATATATTGCTGCCAGAACAGATAAAGGTTTTGGAAGCATTGTGACCTGGAATACACAAACATGGGAAAGGATTAGTTCAAAGCATATTTTGCGCGATCCAATATGTGCATTCAATGTCTCAGCTGATGGAAAGTTTCTGGCATGCGGAACACCTGAAGGAGATATTGTAATTGTAAATTCAACAAATATGCAGATTCAGACAATGATAAAAAAGGCTCACCTTGGCGTAGTAACTGCTTTAGCATTTTCCCCTGATTCAAGGGCATTGGCTTCTGTATCCATGGATTCAAGTGCGAGGGTAACAATAATTGAAGAGAAGAAAAATGGAGGAGGACTGAGCTTGTGGATTGCAATATTTATCATCCTACTTGCAATAGCTGCTTACTTCCTGAAGGTTGAAGGAATTGAAAAGTTAAAGCTTCAATATTACAATCAATTGTAG

Protein sequence

>MsG0480022146.01.T02

MDCGLVWFCLSCSSDGKLIVSLGGGGPCRVWDVSSAIVLATLANENRENFSSCRFSQTNDGTQVLYIAARTDKGFGSIVTWNTQTWERISSKHILRDPICAFNVSADGKFLACGTPEGDIVIVNSTNMQIQTMIKKAHLGVVTALAFSPDSRALASVSMDSSARVTIIEEKKNGGGLSLWIAIFIILLAIAAYFLKVEGIEKLKLQYYNQL*

>MsG0480022146.01.T01

MDCGLVWFCLSCSSDGKLIVSLGGGGPCRVWDVSSAIVLATLANENRENFSSCRFSQTNDGTQVLYIAARTDKGFGSIVTWNTQTWERISSKHILRDPICAFNVSADGKFLACGTPEGDIVIVNSTNMQIQTMIKKAHLGVVTALAFSPDSRALASVSMDSSARVTIIEEKKNGGGLSLWIAIFIILLAIAAYFLKVEGIEKLKLQYYNQL*