AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003444.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003444.01.T01 MTR_1g061860 97.363 531 14 0 1 531 1 531 0.0 1032
MsG0180003444.01.T01 MTR_7g102700 80.421 475 84 3 62 531 50 520 0.0 751
MsG0180003444.01.T01 MTR_7g102700 79.832 476 86 2 62 531 50 521 0.0 750
MsG0180003444.01.T01 MTR_7g102700 78.588 425 82 3 112 531 9 429 0.0 648
MsG0180003444.01.T01 MTR_7g102700 77.934 426 84 2 112 531 9 430 0.0 647
MsG0180003444.01.T01 MTR_0130s0060 67.347 49 16 0 76 124 182 230 3.69e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003444.01.T01 AT1G03910 71.212 462 126 3 75 531 86 545 0.0 642
MsG0180003444.01.T01 AT1G03910 65.020 506 126 4 75 531 86 589 0.0 622
MsG0180003444.01.T01 AT2G36815 52.041 98 33 2 282 378 17 101 7.25e-21 88.2
MsG0180003444.01.T01 AT2G36815 53.125 96 31 2 283 377 24 106 9.19e-21 88.2

Find 175 sgRNAs with CRISPR-Local

Find 504 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATGCTTGCGTAACATTT+TGG 0.170202 1:+62378516 None:intergenic
TTCTTGACCCTCTGCTTTAA+TGG 0.192895 1:+62378266 None:intergenic
TGCAATACAGGCTTGTTTAA+AGG 0.200086 1:-62378548 MsG0180003444.01.T01:intron
CAATGAATTGGATCCAAATA+TGG 0.258307 1:+62377674 None:intergenic
AGCTCAGTATTTGGCGAAAA+AGG 0.258558 1:-62383705 MsG0180003444.01.T01:CDS
CCCTCTGCTTTAATGGGTTC+GGG 0.271684 1:+62378273 None:intergenic
ACCCTCTGCTTTAATGGGTT+CGG 0.272032 1:+62378272 None:intergenic
ATTAGCTCCCATAGCCTTCA+TGG 0.279814 1:+62377948 None:intergenic
CGCCAACCCATGTAGAATAT+TGG 0.284425 1:-62380802 MsG0180003444.01.T01:CDS
TAGAAAAGTTGGTAGAAAAT+AGG 0.288105 1:+62377508 None:intergenic
TCTTGATGGCTCTGATGATT+TGG 0.289649 1:-62381862 MsG0180003444.01.T01:CDS
TGCAGAATTGGAAGCTTTGC+AGG 0.295132 1:-62378754 MsG0180003444.01.T01:CDS
ATCAGAGGGCGAAGATAAAT+TGG 0.296450 1:-62378476 MsG0180003444.01.T01:CDS
CACTCCTTCTGTTGAGTGAT+TGG 0.297655 1:-62378923 MsG0180003444.01.T01:CDS
TCTTGACCCTCTGCTTTAAT+GGG 0.310995 1:+62378267 None:intergenic
GAAAATAGGCTTAGATGGTT+TGG 0.322680 1:+62377522 None:intergenic
ATGCTATTTGTAGGTTTGTT+TGG 0.327045 1:-62382736 MsG0180003444.01.T01:intron
CGCCCTCTGATGGTTTCTTA+AGG 0.331978 1:+62378488 None:intergenic
ACGTGCTCGAGCTGAGTTCC+AGG 0.339829 1:-62382078 MsG0180003444.01.T01:CDS
TTAACTGAAAATTCATCAAT+AGG 0.343796 1:+62382677 None:intergenic
TAATGTTAATTATTATTAGA+TGG 0.346216 1:-62377790 MsG0180003444.01.T01:three_prime_UTR
TGGTAGAAAATAGGCTTAGA+TGG 0.349489 1:+62377517 None:intergenic
GACTTACTTCTCATTAAGAT+TGG 0.354150 1:+62383368 None:intergenic
TCATCACCATGAAACAGTTC+TGG 0.358787 1:+62378207 None:intergenic
AGAGCAGCAGAGACGAATTC+AGG 0.361317 1:-62378022 MsG0180003444.01.T01:CDS
AACCATTAGAAAAGATTTAG+AGG 0.369865 1:+62377650 None:intergenic
CTGATGATAGTAGTAGTGAT+AGG 0.370578 1:-62383775 MsG0180003444.01.T01:CDS
AAAGTGATCTCTTTGCATAT+TGG 0.373779 1:+62378298 None:intergenic
TGCAAAAGCTTCTTCACATC+TGG 0.376117 1:+62378789 None:intergenic
AGATTTAGAGGTCAATGAAT+TGG 0.377489 1:+62377662 None:intergenic
CTCTGGTGCAGAAGTAAATC+TGG 0.379600 1:-62377902 MsG0180003444.01.T01:CDS
AGAGGAAATAGCTCAGTATT+TGG 0.382147 1:-62383714 MsG0180003444.01.T01:CDS
ACTCCTTCTGTTGAGTGATT+GGG 0.388028 1:-62378922 MsG0180003444.01.T01:CDS
CAGCAAAGCTTGTTGAGTAC+TGG 0.391117 1:-62378701 MsG0180003444.01.T01:CDS
TGATGATATCAAAATGCATT+TGG 0.392266 1:-62380840 MsG0180003444.01.T01:CDS
GGGGAAGACACATGCAGAAT+TGG 0.400110 1:-62378766 MsG0180003444.01.T01:CDS
AGAAAGAAGGAGAAGGAAAT+CGG 0.400976 1:-62383930 MsG0180003444.01.T01:CDS
ATCCTTACCAAACATCTTGA+TGG 0.402365 1:-62381876 MsG0180003444.01.T01:CDS
TTGAAGGCTCATACTGTGTC+TGG 0.405951 1:-62383423 MsG0180003444.01.T01:CDS
AGATCAAATGGAGGAGAGTC+AGG 0.409734 1:+62377587 None:intergenic
CACTTACTTTACTCTCGTGT+TGG 0.411956 1:-62377392 MsG0180003444.01.T01:three_prime_UTR
AGACTAGACAAGATAGGATT+AGG 0.412117 1:+62377451 None:intergenic
GCCAACCCATGTAGAATATT+GGG 0.412226 1:-62380801 MsG0180003444.01.T01:CDS
AAATGCATTTGGACTTTGAC+AGG 0.412773 1:-62380829 MsG0180003444.01.T01:CDS
GAAGAAGGAGATGTAATGTT+TGG 0.413161 1:-62377925 MsG0180003444.01.T01:CDS
ATCAGAGCCATCAAGATGTT+TGG 0.429860 1:+62381869 None:intergenic
TCAAATGACTCGAATCCATT+TGG 0.433737 1:-62383396 MsG0180003444.01.T01:CDS
TCCGTATCATACAACATTGC+CGG 0.438880 1:-62377351 MsG0180003444.01.T01:three_prime_UTR
ATGAAACAGTTCTGGTGAAA+AGG 0.440946 1:+62378215 None:intergenic
AGTAGAGCTCTGTCCTCTTC+AGG 0.445180 1:+62378165 None:intergenic
AGAATCTGAGAAGAATAGAA+TGG 0.446968 1:-62383960 MsG0180003444.01.T01:exon
GAAAGTTGCTAAGAAATTGA+AGG 0.448557 1:-62383439 MsG0180003444.01.T01:CDS
TGAAGAGGACAGAGCTCTAC+TGG 0.451227 1:-62378163 MsG0180003444.01.T01:intron
TCTTCTTACAACGGTATCTA+CGG 0.452112 1:-62377562 MsG0180003444.01.T01:three_prime_UTR
AGTCAGGTTAAAAGAGGTAG+AGG 0.455911 1:+62377603 None:intergenic
AGCACGACATGAGGAAGAAA+TGG 0.455954 1:-62382298 MsG0180003444.01.T01:intron
TGAACCATACATGGTCTTCA+AGG 0.457998 1:-62381826 MsG0180003444.01.T01:intron
TTAACCTTGAAGACCATGTA+TGG 0.458201 1:+62381822 None:intergenic
GTAGTAGTGATAGGGATGGT+AGG 0.460746 1:-62383766 MsG0180003444.01.T01:CDS
GAAATCTGAGGAGGATATTG+AGG 0.461280 1:-62378437 MsG0180003444.01.T01:CDS
TGTTCAGCAAGCACCTCGGC+TGG 0.461619 1:+62378837 None:intergenic
AAAGAGACAGAGAGAAAGGA+TGG 0.468118 1:-62382645 MsG0180003444.01.T01:intron
TCTCCGGTGGTGTTGATCAT+TGG 0.468616 1:-62384204 MsG0180003444.01.T01:five_prime_UTR
ACTAAGTGGGGTCGGCTACA+TGG 0.470126 1:-62377728 MsG0180003444.01.T01:three_prime_UTR
TAACATTAAAACTAGAATCA+TGG 0.471689 1:+62377805 None:intergenic
GAGACGGAGCCGACATGAAT+CGG 0.472964 1:-62383816 MsG0180003444.01.T01:CDS
CCAACCGTGTTCTCCGCCGC+AGG 0.483061 1:-62384163 MsG0180003444.01.T01:intron
TGTAAGAAGAGTAGATCAAA+TGG 0.483895 1:+62377575 None:intergenic
CACTATGGTGACCACTCCTC+CGG 0.484550 1:+62383855 None:intergenic
AGCACCTATAGTAGAAAAGT+TGG 0.486257 1:+62377497 None:intergenic
GGTAAGGATATCAATTGGCT+TGG 0.490758 1:+62381890 None:intergenic
AAATTATCTTCAGATGGAGC+AGG 0.490796 1:+62377982 None:intergenic
TGTTTGGTAAGGATATCAAT+TGG 0.493901 1:+62381885 None:intergenic
AATTTATCTTCGCCCTCTGA+TGG 0.494676 1:+62378478 None:intergenic
GAATCTGAGAAGAATAGAAT+GGG 0.496092 1:-62383959 MsG0180003444.01.T01:exon
AGAACACGGTTGGAGAATTA+CGG 0.501092 1:+62384173 None:intergenic
ATTGAGCGTGATGTTGTTCA+AGG 0.501715 1:-62382704 MsG0180003444.01.T01:CDS
CCACTTAGTGGGATAAGGCT+TGG 0.501997 1:+62377742 None:intergenic
ATCTCAAAATTATCTTCAGA+TGG 0.502531 1:+62377976 None:intergenic
AAGTAAGTGTAGCGGAGATG+AGG 0.503375 1:+62377406 None:intergenic
CGACCCCACTTAGTGGGATA+AGG 0.504780 1:+62377737 None:intergenic
TTAAGATTGGAATCACCAAA+TGG 0.507057 1:+62383381 None:intergenic
GAAGAAGTAGAAGATGAGGC+TGG 0.507844 1:-62378240 MsG0180003444.01.T01:CDS
GATGAAAGCCATGAAGGCTA+TGG 0.508933 1:-62377956 MsG0180003444.01.T01:CDS
ATGTAGCCGACCCCACTTAG+TGG 0.509347 1:+62377730 None:intergenic
AGCAAAGCTTGTTGAGTACT+GGG 0.510191 1:-62378700 MsG0180003444.01.T01:CDS
AGGTGAAGAAGTAGAAGATG+AGG 0.510258 1:-62378244 MsG0180003444.01.T01:CDS
GTTGTATGATACGGAGTGTT+GGG 0.513482 1:+62377359 None:intergenic
ACCGGCAATGTTGTATGATA+CGG 0.514906 1:+62377350 None:intergenic
GGGTTTGACAGTGAACGAAA+TGG 0.515774 1:-62380873 MsG0180003444.01.T01:CDS
GAGGAGAGTCAGGTTAAAAG+AGG 0.517218 1:+62377597 None:intergenic
AAGATGCAATTGATCGAGCT+AGG 0.518701 1:-62378878 MsG0180003444.01.T01:CDS
AAAATGTGAATTATCATCTC+CGG 0.519789 1:-62384220 MsG0180003444.01.T01:five_prime_UTR
TCGAGCTGAGTTCCAGGACT+GGG 0.522136 1:-62382072 MsG0180003444.01.T01:CDS
CTCGAGCTGAGTTCCAGGAC+TGG 0.526610 1:-62382073 MsG0180003444.01.T01:CDS
AATGCAGGCGGAAATTGAAA+AGG 0.529839 1:-62382355 MsG0180003444.01.T01:intron
CCGATGATTCCGATAGAATC+CGG 0.534725 1:-62383874 MsG0180003444.01.T01:CDS
ACCACTCCTCCGGATTCTAT+CGG 0.536244 1:+62383865 None:intergenic
AGAAGTAAATCTGGATTCAC+AGG 0.541558 1:-62377893 MsG0180003444.01.T01:CDS
GAAGAAACGAAGAGAAGAGA+GGG 0.541647 1:-62382331 MsG0180003444.01.T01:CDS
TCTGTGACCGCCGATCACTA+TGG 0.542891 1:+62383840 None:intergenic
TGATGATAGTAGTAGTGATA+GGG 0.552104 1:-62383774 MsG0180003444.01.T01:CDS
CCAAGCCTTATCCCACTAAG+TGG 0.555227 1:-62377742 MsG0180003444.01.T01:three_prime_UTR
CTCAAGGAAAATTACTGAAG+AGG 0.557543 1:-62383732 MsG0180003444.01.T01:CDS
GAATGGGTAGGAAAGAAAGA+AGG 0.558466 1:-62383943 MsG0180003444.01.T01:CDS
AGAAATAAATGAACCATACA+TGG 0.559048 1:-62381835 MsG0180003444.01.T01:CDS
ATACCTCCCAATATTCTACA+TGG 0.559393 1:+62380795 None:intergenic
CAAGCCTTATCCCACTAAGT+GGG 0.565284 1:-62377741 MsG0180003444.01.T01:three_prime_UTR
TGTTGTATGATACGGAGTGT+TGG 0.566140 1:+62377358 None:intergenic
CTTCTTACAACGGTATCTAC+GGG 0.566269 1:-62377561 MsG0180003444.01.T01:three_prime_UTR
TCCCAATATTCTACATGGGT+TGG 0.568443 1:+62380800 None:intergenic
AGGATGTTGCGTTGGATGAG+TGG 0.569707 1:+62377426 None:intergenic
CCGGATTCTATCGGAATCAT+CGG 0.570818 1:+62383874 None:intergenic
AGCCATCAAGATGTTTGGTA+AGG 0.571050 1:+62381874 None:intergenic
GCTATGGGAGCTAATGAAGA+AGG 0.572049 1:-62377940 MsG0180003444.01.T01:CDS
AAGAAGAGTAGATCAAATGG+AGG 0.572060 1:+62377578 None:intergenic
CCTGCGGCGGAGAACACGGT+TGG 0.575105 1:+62384163 None:intergenic
ACATTGCCGGTCATACTACA+TGG 0.575561 1:-62377338 MsG0180003444.01.T01:three_prime_UTR
ATGAAAGCCATGAAGGCTAT+GGG 0.576335 1:-62377955 MsG0180003444.01.T01:CDS
CGAACCTGCGGCGGAGAACA+CGG 0.579053 1:+62384159 None:intergenic
ATTAAAGCAGAGGGTCAAGA+AGG 0.580470 1:-62378264 MsG0180003444.01.T01:CDS
CGGAGATGAGGATGTTGCGT+TGG 0.581910 1:+62377418 None:intergenic
AGGTGCTACTCTCTCTCGAA+TGG 0.582983 1:-62377481 MsG0180003444.01.T01:three_prime_UTR
TCAGCAAGCACCTCGGCTGG+AGG 0.583261 1:+62378840 None:intergenic
CCCGAACCCATTAAAGCAGA+GGG 0.588808 1:-62378273 MsG0180003444.01.T01:CDS
ATTGAGTCAGAAATGCGTAC+TGG 0.589102 1:-62378726 MsG0180003444.01.T01:CDS
TCCGATAGAATCCGGAGGAG+TGG 0.590097 1:-62383866 MsG0180003444.01.T01:CDS
GGAGATGTAATGTTTGGCTC+TGG 0.590473 1:-62377919 MsG0180003444.01.T01:CDS
CTGAGAAGAATAGAATGGGT+AGG 0.591313 1:-62383955 MsG0180003444.01.T01:exon
TTACCTTGGCTTTATATATG+CGG 0.592230 1:+62378658 None:intergenic
ATCGGCGGTCACAGAGGAGA+CGG 0.593716 1:-62383832 MsG0180003444.01.T01:CDS
TCCCGAACCCATTAAAGCAG+AGG 0.593821 1:-62378274 MsG0180003444.01.T01:CDS
ATTGATCGAGCTAGGGTGCG+TGG 0.595446 1:-62378870 MsG0180003444.01.T01:CDS
GTGGTAAGACTAGACAAGAT+AGG 0.595741 1:+62377445 None:intergenic
ATATTCTACATGGGTTGGCG+TGG 0.603561 1:+62380805 None:intergenic
GTAGGAAAGAAAGAAGGAGA+AGG 0.603835 1:-62383937 MsG0180003444.01.T01:CDS
GATAGTAGTAGTGATAGGGA+TGG 0.605108 1:-62383770 MsG0180003444.01.T01:CDS
TTGATCTACTCTTCTTACAA+CGG 0.606119 1:-62377571 MsG0180003444.01.T01:three_prime_UTR
TGAAGAAACGAAGAGAAGAG+AGG 0.606155 1:-62382332 MsG0180003444.01.T01:CDS
CTTATCCCACTAAGTGGGGT+CGG 0.608874 1:-62377736 MsG0180003444.01.T01:three_prime_UTR
AGATGCAATTGATCGAGCTA+GGG 0.609364 1:-62378877 MsG0180003444.01.T01:CDS
GTTTCATGGTGATGAAAATG+AGG 0.610771 1:-62378199 MsG0180003444.01.T01:CDS
TGGAGAAGAACCTCCAGCCG+AGG 0.612324 1:-62378850 MsG0180003444.01.T01:CDS
CGCCTTAAGAAACCATCAGA+GGG 0.614052 1:-62378490 MsG0180003444.01.T01:CDS
GAGACGAATTCAGGAAGCAA+TGG 0.614187 1:-62378013 MsG0180003444.01.T01:CDS
CCTTGGCTTTATATATGCGG+AGG 0.616946 1:+62378661 None:intergenic
AAGAAGTAGAAGATGAGGCT+GGG 0.617278 1:-62378239 MsG0180003444.01.T01:CDS
GTAGGAAGAGAAAGTCCTCA+AGG 0.620517 1:-62383748 MsG0180003444.01.T01:CDS
ACTCCCAATCACTCAACAGA+AGG 0.621361 1:+62378919 None:intergenic
TGTAGCCGACCCCACTTAGT+GGG 0.623805 1:+62377731 None:intergenic
CCTCCGCATATATAAAGCCA+AGG 0.624228 1:-62378661 MsG0180003444.01.T01:intron
AATGCATTTGGACTTTGACA+GGG 0.628278 1:-62380828 MsG0180003444.01.T01:CDS
GGAGTGGTCACCATAGTGAT+CGG 0.640226 1:-62383850 MsG0180003444.01.T01:CDS
GTGCCAATGATCAACACCAC+CGG 0.641721 1:+62384201 None:intergenic
ACTTGAGAAAGCACGACATG+AGG 0.644679 1:-62382307 MsG0180003444.01.T01:CDS
ATGTGAATTATCATCTCCGG+TGG 0.645021 1:-62384217 MsG0180003444.01.T01:five_prime_UTR
CGAGAGTAAAGTAAGTGTAG+CGG 0.654123 1:+62377398 None:intergenic
GGAAGCTATTGATCCTGAAG+AGG 0.658125 1:-62378178 MsG0180003444.01.T01:CDS
TGCTCATGTTATGAAATCTG+AGG 0.658528 1:-62378449 MsG0180003444.01.T01:CDS
TGTCCGAGTCCGATTCATGT+CGG 0.659818 1:+62383807 None:intergenic
GAGCCGACATGAATCGGACT+CGG 0.661128 1:-62383810 MsG0180003444.01.T01:CDS
TACCTCCCAATATTCTACAT+GGG 0.662886 1:+62380796 None:intergenic
TCATGTTATGAAATCTGAGG+AGG 0.666704 1:-62378446 MsG0180003444.01.T01:CDS
AAGCCTTATCCCACTAAGTG+GGG 0.671687 1:-62377740 MsG0180003444.01.T01:three_prime_UTR
GGATTGCGAAGAAGTTGACT+CGG 0.678197 1:+62383895 None:intergenic
ATAGTGATCGGCGGTCACAG+AGG 0.679327 1:-62383838 MsG0180003444.01.T01:CDS
AACCCATGTAGAATATTGGG+AGG 0.679555 1:-62380798 MsG0180003444.01.T01:intron
ACGCCTTAAGAAACCATCAG+AGG 0.682618 1:-62378491 MsG0180003444.01.T01:CDS
GTATGATACGGAGTGTTGGG+CGG 0.690097 1:+62377362 None:intergenic
TCTGAAATTAGATTGCGTGA+AGG 0.695601 1:-62381918 MsG0180003444.01.T01:CDS
GTGGTCACCATAGTGATCGG+CGG 0.706810 1:-62383847 MsG0180003444.01.T01:CDS
ATGATTCCGATAGAATCCGG+AGG 0.713791 1:-62383871 MsG0180003444.01.T01:CDS
CGGTTGGAGAATTACGGCGA+CGG 0.722765 1:+62384179 None:intergenic
GAGGTGCTTGCTGAACAGAG+AGG 0.735663 1:-62378831 MsG0180003444.01.T01:CDS
TCTCTGTTCAGCAAGCACCT+CGG 0.736566 1:+62378833 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAACTAAATGATTAAA+AGG + Chr1:62381459-62381478 None:intergenic 10.0%
!! TAATGTTAATTATTATTAGA+TGG - Chr1:62383774-62383793 MsG0180003444.01.T01:CDS 10.0%
!! TATATGTGTAAATATAAATA+TGG - Chr1:62378420-62378439 MsG0180003444.01.T01:intron 10.0%
!!! AAATAGTTTTTTCAATTTAA+TGG + Chr1:62381527-62381546 None:intergenic 10.0%
!!! ATAATTAATTTTTTATGACA+TGG + Chr1:62379867-62379886 None:intergenic 10.0%
!!! ATTAAATAAATCATAGTTTT+CGG + Chr1:62380433-62380452 None:intergenic 10.0%
!!! TTTTTTTTTTTTTAATGATC+TGG - Chr1:62378027-62378046 MsG0180003444.01.T01:CDS 10.0%
!! ACATAATGATTTGATATTTA+TGG - Chr1:62380664-62380683 MsG0180003444.01.T01:intron 15.0%
!! ATACTTCAATAGTAAAATTA+TGG - Chr1:62380824-62380843 MsG0180003444.01.T01:CDS 15.0%
!! ATCTGAAAATTATATTTCTT+CGG + Chr1:62378289-62378308 None:intergenic 15.0%
!! GATTTATTTAATAAATGACA+TGG - Chr1:62380441-62380460 MsG0180003444.01.T01:intron 15.0%
!! TAAAACAGAAAAAAATGAAA+AGG + Chr1:62378672-62378691 None:intergenic 15.0%
!! TATATCAAATAAAATGGTAT+TGG - Chr1:62379564-62379583 MsG0180003444.01.T01:intron 15.0%
!! TGTTGTTATATCAAATAAAA+TGG - Chr1:62379558-62379577 MsG0180003444.01.T01:intron 15.0%
!! TTATAATTTACAACAGTTAA+AGG + Chr1:62380549-62380568 None:intergenic 15.0%
!! TTATTTGATATAACAACAAA+TGG + Chr1:62379556-62379575 None:intergenic 15.0%
!!! AATTTTAAATACTTTGTATG+AGG + Chr1:62381562-62381581 None:intergenic 15.0%
!!! ATTATGATTTTACAACATTT+TGG - Chr1:62379006-62379025 MsG0180003444.01.T01:intron 15.0%
!!! ATTTGTAAAATATTGACTTT+TGG - Chr1:62383189-62383208 MsG0180003444.01.T01:intron 15.0%
!!! CTAATTTCTAATAATTTGTT+GGG - Chr1:62380065-62380084 MsG0180003444.01.T01:intron 15.0%
!!! GTTAAAAAGTATTAGATAAA+AGG + Chr1:62379999-62380018 None:intergenic 15.0%
!!! TATAATTTTCAGATATGTAT+TGG - Chr1:62378295-62378314 MsG0180003444.01.T01:CDS 15.0%
!!! TCATACAAAGTATTTAAAAT+TGG - Chr1:62381561-62381580 MsG0180003444.01.T01:intron 15.0%
!!! TCATTTTTTTCTGTTTTATT+TGG - Chr1:62378674-62378693 MsG0180003444.01.T01:CDS 15.0%
!!! TCTAATTTCTAATAATTTGT+TGG - Chr1:62380064-62380083 MsG0180003444.01.T01:intron 15.0%
!! AAAGATTTATCAGTTTATCT+TGG - Chr1:62381831-62381850 MsG0180003444.01.T01:CDS 20.0%
!! AACTGATAAATCTTTAGTTA+CGG + Chr1:62381826-62381845 None:intergenic 20.0%
!! ACAAGACAGAAAAAAAATTA+GGG + Chr1:62378232-62378251 None:intergenic 20.0%
!! AGAAAAAAATTGAATAACCT+TGG - Chr1:62378532-62378551 MsG0180003444.01.T01:CDS 20.0%
!! CAGTCAAGAAAATAAATAAA+TGG - Chr1:62381955-62381974 MsG0180003444.01.T01:intron 20.0%
!! CCAATAATAAGTTATAAGAA+TGG + Chr1:62379301-62379320 None:intergenic 20.0%
!! CCATTCTTATAACTTATTAT+TGG - Chr1:62379298-62379317 MsG0180003444.01.T01:intron 20.0%
!! GAAATTATCTAAAGATTAAG+AGG - Chr1:62380846-62380865 MsG0180003444.01.T01:CDS 20.0%
!! GAAGAAAAACAAGTTATTAT+TGG - Chr1:62378450-62378469 MsG0180003444.01.T01:CDS 20.0%
!! GCAAAATTATGAAATTAGAT+TGG - Chr1:62380463-62380482 MsG0180003444.01.T01:intron 20.0%
!! GGTTCATCATAAAAAATAAT+GGG - Chr1:62382134-62382153 MsG0180003444.01.T01:intron 20.0%
!! GTTCATCATAAAAAATAATG+GGG - Chr1:62382135-62382154 MsG0180003444.01.T01:intron 20.0%
!! GTTCTTTATTCTCATAATAT+TGG + Chr1:62379785-62379804 None:intergenic 20.0%
!! TAACATTAAAACTAGAATCA+TGG + Chr1:62383762-62383781 None:intergenic 20.0%
!! TATATATTGTTGTATACTCT+TGG - Chr1:62380889-62380908 MsG0180003444.01.T01:intron 20.0%
!! TCTGAAAATTATATTTCTTC+GGG + Chr1:62378288-62378307 None:intergenic 20.0%
!! TCTTGTTAAAATTATAATGC+AGG - Chr1:62379194-62379213 MsG0180003444.01.T01:intron 20.0%
!! TTAACAAGAAATTAGTCAAA+TGG + Chr1:62379183-62379202 None:intergenic 20.0%
!! TTAACTGAAAATTCATCAAT+AGG + Chr1:62378890-62378909 None:intergenic 20.0%
!! TTTGTTTCAGTTAACTTATA+TGG - Chr1:62382514-62382533 MsG0180003444.01.T01:intron 20.0%
!!! AAAAAATGTTTTTGGATGTT+AGG - Chr1:62378957-62378976 MsG0180003444.01.T01:intron 20.0%
!!! AAAAATGTTTTTGGATGTTA+GGG - Chr1:62378958-62378977 MsG0180003444.01.T01:intron 20.0%
!!! AGGTTATTCAATTTTTTTCT+TGG + Chr1:62378532-62378551 None:intergenic 20.0%
!!! AGTTTTGAATTTAAACACTT+TGG - Chr1:62381414-62381433 MsG0180003444.01.T01:intron 20.0%
!!! ATCATTGTTATTTTAGGTTT+TGG - Chr1:62377567-62377586 MsG0180003444.01.T01:three_prime_UTR 20.0%
!!! ATGAATTGAATTGGTTTAAA+GGG - Chr1:62378058-62378077 MsG0180003444.01.T01:intron 20.0%
!!! ATTCCTTTTTTTATTTGATG+CGG - Chr1:62381602-62381621 MsG0180003444.01.T01:intron 20.0%
!!! GATTTTCATTGATTTTGAAA+AGG - Chr1:62381677-62381696 MsG0180003444.01.T01:intron 20.0%
!!! GTTTTGAATTTAAACACTTT+GGG - Chr1:62381415-62381434 MsG0180003444.01.T01:intron 20.0%
!!! TAACATCCAAAAACATTTTT+TGG + Chr1:62378958-62378977 None:intergenic 20.0%
!!! TATGAATTGAATTGGTTTAA+AGG - Chr1:62378057-62378076 MsG0180003444.01.T01:intron 20.0%
!!! TGAAGTATCATTGTTATTTT+AGG - Chr1:62377561-62377580 MsG0180003444.01.T01:three_prime_UTR 20.0%
!!! TTGAAATTGTTTCTTCAATT+TGG - Chr1:62377458-62377477 MsG0180003444.01.T01:three_prime_UTR 20.0%
!!! TTTTCTCCAAAAAATGTTTT+TGG - Chr1:62378949-62378968 MsG0180003444.01.T01:intron 20.0%
!!! TTTTTTTTTTAATGATCTGG+AGG - Chr1:62378030-62378049 MsG0180003444.01.T01:CDS 20.0%
! AAAAAATAGTTTATGCACCA+AGG + Chr1:62379416-62379435 None:intergenic 25.0%
! AAAATGTGAATTATCATCTC+CGG - Chr1:62377344-62377363 MsG0180003444.01.T01:three_prime_UTR 25.0%
! AAATTAGAAACTCATGCAAA+AGG + Chr1:62380052-62380071 None:intergenic 25.0%
! AAATTAGTCAAATGGTAGAT+GGG + Chr1:62379175-62379194 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG + Chr1:62383917-62383936 None:intergenic 25.0%
! AAGAAGACAACTAATTCATT+GGG + Chr1:62382481-62382500 None:intergenic 25.0%
! ACTACATGGAAAATATATAG+TGG - Chr1:62384240-62384259 MsG0180003444.01.T01:five_prime_UTR 25.0%
! ACTATAGATTAGAGCAAATA+AGG + Chr1:62380978-62380997 None:intergenic 25.0%
! ACTGATAAATCTTTAGTTAC+GGG + Chr1:62381825-62381844 None:intergenic 25.0%
! AGAAATAAATGAACCATACA+TGG - Chr1:62379729-62379748 MsG0180003444.01.T01:intron 25.0%
! ATCTCAAAATTATCTTCAGA+TGG + Chr1:62383591-62383610 None:intergenic 25.0%
! ATGCATAACATTACATGTTA+AGG + Chr1:62382548-62382567 None:intergenic 25.0%
! ATTTAGTCATGCTAATGAAA+GGG + Chr1:62380607-62380626 None:intergenic 25.0%
! CACAAGACAGAAAAAAAATT+AGG + Chr1:62378233-62378252 None:intergenic 25.0%
! GAAAAGAAACATGAGTTTAA+AGG + Chr1:62380527-62380546 None:intergenic 25.0%
! GGGTTCATCATAAAAAATAA+TGG - Chr1:62382133-62382152 MsG0180003444.01.T01:intron 25.0%
! GTCATTTCATAATTCATGTT+CGG - Chr1:62382583-62382602 MsG0180003444.01.T01:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG - Chr1:62383877-62383896 MsG0180003444.01.T01:CDS 25.0%
! GTTGCTGAATAAGTTTATTT+CGG - Chr1:62378495-62378514 MsG0180003444.01.T01:CDS 25.0%
! TAAACAGCAAATAAGAAGTA+TGG - Chr1:62382325-62382344 MsG0180003444.01.T01:CDS 25.0%
! TAAGAAGACAACTAATTCAT+TGG + Chr1:62382482-62382501 None:intergenic 25.0%
! TAAGTTAACTGAAACAAAAG+AGG + Chr1:62382512-62382531 None:intergenic 25.0%
! TATTTAGTCATGCTAATGAA+AGG + Chr1:62380608-62380627 None:intergenic 25.0%
! TGAGTTTGTGTTAAGTATAT+AGG - Chr1:62383464-62383483 MsG0180003444.01.T01:intron 25.0%
! TGATGATATCAAAATGCATT+TGG - Chr1:62380724-62380743 MsG0180003444.01.T01:intron 25.0%
! TGTTAAAATTATAATGCAGG+CGG - Chr1:62379197-62379216 MsG0180003444.01.T01:intron 25.0%
! TTAGATAAAAGGATATTGCA+TGG + Chr1:62379988-62380007 None:intergenic 25.0%
! TTTGATGTTGAATTGTTCTT+TGG - Chr1:62378085-62378104 MsG0180003444.01.T01:intron 25.0%
!! ATAAAAAATAATGGGGAGAT+AGG - Chr1:62382142-62382161 MsG0180003444.01.T01:intron 25.0%
!! ATACAGTGGTTTTCTTTAAA+AGG - Chr1:62381701-62381720 MsG0180003444.01.T01:intron 25.0%
!! ATTTGTATGATTTTCACACT+TGG - Chr1:62383708-62383727 MsG0180003444.01.T01:CDS 25.0%
!! ATTTTCACACTTGGTAAAAT+GGG - Chr1:62383717-62383736 MsG0180003444.01.T01:CDS 25.0%
!! GGAAAATCAAAATGAAGTTT+TGG + Chr1:62383228-62383247 None:intergenic 25.0%
!! TAAAAAATAATGGGGAGATA+GGG - Chr1:62382143-62382162 MsG0180003444.01.T01:intron 25.0%
!! TAGTTCAAAGAAACTTTTTG+TGG - Chr1:62378351-62378370 MsG0180003444.01.T01:intron 25.0%
!! TTTTTCTCTGTTGAATAAAC+CGG + Chr1:62381204-62381223 None:intergenic 25.0%
!!! AAGCTTTTAGTTTTTTCGTT+TGG - Chr1:62378597-62378616 MsG0180003444.01.T01:intron 25.0%
!!! AATGCATTTTGATATCATCA+TGG + Chr1:62380724-62380743 None:intergenic 25.0%
!!! ACATTGTTATTTTCTAGAAG+CGG - Chr1:62378722-62378741 MsG0180003444.01.T01:CDS 25.0%
!!! ATTTTGATCAAAGCAAGTTT+AGG - Chr1:62379623-62379642 MsG0180003444.01.T01:intron 25.0%
!!! CAAAATGAAGTTTTGGATAT+AGG + Chr1:62383221-62383240 None:intergenic 25.0%
!!! CTAGTTTTAAACGTCAATAT+TGG - Chr1:62380631-62380650 MsG0180003444.01.T01:intron 25.0%
!!! TAATTTTGATATACTGTCGA+TGG - Chr1:62377922-62377941 MsG0180003444.01.T01:CDS 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + Chr1:62384059-62384078 None:intergenic 25.0%
!!! TATCAGTTTATCTTGGTTTT+AGG - Chr1:62381838-62381857 MsG0180003444.01.T01:CDS 25.0%
!!! TATTTTTTATGATGAACCCA+AGG + Chr1:62382132-62382151 None:intergenic 25.0%
!!! TTTTAGTTTTTTCGTTTGGA+GGG - Chr1:62378601-62378620 MsG0180003444.01.T01:intron 25.0%
AAAAAAATTAGGGAGAAGAG+AGG + Chr1:62378222-62378241 None:intergenic 30.0%
AAAAAATTAGGGAGAAGAGA+GGG + Chr1:62378221-62378240 None:intergenic 30.0%
AAAGTGATCTCTTTGCATAT+TGG + Chr1:62383269-62383288 None:intergenic 30.0%
AAATTCGAAGTGAAAATCGA+CGG + Chr1:62377439-62377458 None:intergenic 30.0%
AATGATTAATACTCGTTCCA+AGG + Chr1:62378552-62378571 None:intergenic 30.0%
ACAAAACAACTAGTTAGTAG+TGG + Chr1:62379046-62379065 None:intergenic 30.0%
ACACCGCATCAAATAAAAAA+AGG + Chr1:62381608-62381627 None:intergenic 30.0%
ACATGGTATAACTAAGATTG+AGG - Chr1:62381098-62381117 MsG0180003444.01.T01:intron 30.0%
ACATGTAATGTTATGCATCT+TGG - Chr1:62382550-62382569 MsG0180003444.01.T01:intron 30.0%
AGAATCTGAGAAGAATAGAA+TGG - Chr1:62377604-62377623 MsG0180003444.01.T01:three_prime_UTR 30.0%
AGATTTAGAGGTCAATGAAT+TGG + Chr1:62383905-62383924 None:intergenic 30.0%
ATACAAACCATGGAAATGTA+TGG - Chr1:62381994-62382013 MsG0180003444.01.T01:intron 30.0%
ATCATCATAATCAATAACCC+GGG + Chr1:62379127-62379146 None:intergenic 30.0%
ATCATTGAAGTTCATGATGT+TGG - Chr1:62378566-62378585 MsG0180003444.01.T01:intron 30.0%
ATGCATAGATGATATTGTAC+TGG + Chr1:62381495-62381514 None:intergenic 30.0%
CAATAAATTTGCAAGCTTAG+CGG + Chr1:62378702-62378721 None:intergenic 30.0%
CAATGAATTGGATCCAAATA+TGG + Chr1:62383893-62383912 None:intergenic 30.0%
CATCATCATAATCAATAACC+CGG + Chr1:62379128-62379147 None:intergenic 30.0%
CATCTTAGAATTAGAGCTTT+AGG - Chr1:62381160-62381179 MsG0180003444.01.T01:intron 30.0%
CATTACATGTTAAGGAACAA+TGG + Chr1:62382540-62382559 None:intergenic 30.0%
CTTAAAACCATACATTTCCA+TGG + Chr1:62382004-62382023 None:intergenic 30.0%
CTTTCTATCTTTAACTCACT+CGG + Chr1:62380360-62380379 None:intergenic 30.0%
GAAAGTTGCTAAGAAATTGA+AGG - Chr1:62378125-62378144 MsG0180003444.01.T01:intron 30.0%
GAAATTAGTCAAATGGTAGA+TGG + Chr1:62379176-62379195 None:intergenic 30.0%
GAAGACTAATGTAGTGATAT+TGG - Chr1:62381631-62381650 MsG0180003444.01.T01:intron 30.0%
GAATCTGAGAAGAATAGAAT+GGG - Chr1:62377605-62377624 MsG0180003444.01.T01:three_prime_UTR 30.0%
GACTTACTTCTCATTAAGAT+TGG + Chr1:62378199-62378218 None:intergenic 30.0%
GAGGTGTATATGAATTGAAT+TGG - Chr1:62378049-62378068 MsG0180003444.01.T01:CDS 30.0%
GATTTGATATTTATGGTGCA+GGG - Chr1:62380671-62380690 MsG0180003444.01.T01:intron 30.0%
GCTAAAAGATGCAATTTGAT+TGG + Chr1:62379845-62379864 None:intergenic 30.0%
GTGATATTGGAGAAATCAAA+AGG - Chr1:62381644-62381663 MsG0180003444.01.T01:intron 30.0%
GTTCGTAAATAAGATGATGA+AGG + Chr1:62378808-62378827 None:intergenic 30.0%
GTTGTATACTCTTGGAATTT+GGG - Chr1:62380897-62380916 MsG0180003444.01.T01:intron 30.0%
TAATGTTAGAGAGATTACCT+TGG + Chr1:62382923-62382942 None:intergenic 30.0%
TACCCAAATCATGATATTTG+AGG + Chr1:62382109-62382128 None:intergenic 30.0%
TCTGAGTAGAAAAGTTGAAA+TGG + Chr1:62379909-62379928 None:intergenic 30.0%
TGATGATAGTAGTAGTGATA+GGG - Chr1:62377790-62377809 MsG0180003444.01.T01:three_prime_UTR 30.0%
TGATTTGATATTTATGGTGC+AGG - Chr1:62380670-62380689 MsG0180003444.01.T01:intron 30.0%
TGCCTCAAATATCATGATTT+GGG - Chr1:62382104-62382123 MsG0180003444.01.T01:intron 30.0%
TGGTCTTCAAGGTTAATATT+TGG - Chr1:62379749-62379768 MsG0180003444.01.T01:intron 30.0%
TGTAAGAAGAGTAGATCAAA+TGG + Chr1:62383992-62384011 None:intergenic 30.0%
TGTTACATGCCATAACTTAA+TGG - Chr1:62382972-62382991 MsG0180003444.01.T01:intron 30.0%
TGTTGTATACTCTTGGAATT+TGG - Chr1:62380896-62380915 MsG0180003444.01.T01:intron 30.0%
TGTTTGGTAAGGATATCAAT+TGG + Chr1:62379682-62379701 None:intergenic 30.0%
TTAAGATTGGAATCACCAAA+TGG + Chr1:62378186-62378205 None:intergenic 30.0%
TTAATGCTACGAAACCATAT+GGG - Chr1:62381784-62381803 MsG0180003444.01.T01:intron 30.0%
TTATACAAATTGTCTCTCAC+AGG - Chr1:62379447-62379466 MsG0180003444.01.T01:intron 30.0%
TTGATCTACTCTTCTTACAA+CGG - Chr1:62383993-62384012 MsG0180003444.01.T01:intron 30.0%
TTGCCTCAAATATCATGATT+TGG - Chr1:62382103-62382122 MsG0180003444.01.T01:intron 30.0%
! AAAGAAACTTTTTGTGGAGA+GGG - Chr1:62378357-62378376 MsG0180003444.01.T01:intron 30.0%
! ATGCTATTTGTAGGTTTGTT+TGG - Chr1:62378828-62378847 MsG0180003444.01.T01:CDS 30.0%
! CTAAAGCTCTAATTCTAAGA+TGG + Chr1:62381162-62381181 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - Chr1:62383912-62383931 MsG0180003444.01.T01:CDS 30.0%
! GATTTTCACACTTGGTAAAA+TGG - Chr1:62383716-62383735 MsG0180003444.01.T01:CDS 30.0%
! TAAGCAAAAAGCATGAACAA+TGG + Chr1:62381915-62381934 None:intergenic 30.0%
! TAATCTATAGTTGATGTCTC+AGG - Chr1:62380987-62381006 MsG0180003444.01.T01:intron 30.0%
! TATTTTCCATGTAGTATGAC+CGG + Chr1:62384235-62384254 None:intergenic 30.0%
! TCTACCAACTTTTCTACTAT+AGG - Chr1:62384063-62384082 MsG0180003444.01.T01:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG + Chr1:62383873-62383892 None:intergenic 30.0%
! TTTACGAACATGCTATTTGT+AGG - Chr1:62378819-62378838 MsG0180003444.01.T01:CDS 30.0%
! TTTTCTAATGGTTTCTCGAA+TGG - Chr1:62383924-62383943 MsG0180003444.01.T01:CDS 30.0%
!! CATGCTTTTTGCTTATGATT+TGG - Chr1:62381920-62381939 MsG0180003444.01.T01:CDS 30.0%
!! CTACTAACTAGTTGTTTTGT+TGG - Chr1:62379046-62379065 MsG0180003444.01.T01:intron 30.0%
!! GTTTTAAACGTCAATATTGG+TGG - Chr1:62380634-62380653 MsG0180003444.01.T01:intron 30.0%
!! TAGATCACAGGTTTGTTATT+GGG + Chr1:62381124-62381143 None:intergenic 30.0%
!! TTACCTTGGCTTTATATATG+CGG + Chr1:62382909-62382928 None:intergenic 30.0%
!! TTTGCTTATGATTTGGTCAT+TGG - Chr1:62381927-62381946 MsG0180003444.01.T01:CDS 30.0%
!!! CTTTTAGTTTTTTCGTTTGG+AGG - Chr1:62378600-62378619 MsG0180003444.01.T01:intron 30.0%
AAAAAAGAGAAGTGGAGGTA+TGG - Chr1:62379515-62379534 MsG0180003444.01.T01:intron 35.0%
AAATGCATTTGGACTTTGAC+AGG - Chr1:62380735-62380754 MsG0180003444.01.T01:intron 35.0%
AAATTATCTTCAGATGGAGC+AGG + Chr1:62383585-62383604 None:intergenic 35.0%
AACCAGGATAAAACGATAAG+CGG + Chr1:62381871-62381890 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG + Chr1:62383989-62384008 None:intergenic 35.0%
AATGCATTTGGACTTTGACA+GGG - Chr1:62380736-62380755 MsG0180003444.01.T01:intron 35.0%
ACATTCAACCCTATATAGCA+TGG + Chr1:62382298-62382317 None:intergenic 35.0%
ACTAAACAAGCCATGGAAAA+AGG + Chr1:62380798-62380817 None:intergenic 35.0%
AGAAAAAGAGACAGAGAGAA+AGG - Chr1:62378915-62378934 MsG0180003444.01.T01:CDS 35.0%
AGAAAGAAGGAGAAGGAAAT+CGG - Chr1:62377634-62377653 MsG0180003444.01.T01:three_prime_UTR 35.0%
AGAAGTAAATCTGGATTCAC+AGG - Chr1:62383671-62383690 MsG0180003444.01.T01:intron 35.0%
AGACTAGACAAGATAGGATT+AGG + Chr1:62384116-62384135 None:intergenic 35.0%
AGACTAGATAGTATTTGCGA+TGG + Chr1:62377501-62377520 None:intergenic 35.0%
AGAGAAAAACCTCACAAAAC+TGG - Chr1:62381215-62381234 MsG0180003444.01.T01:intron 35.0%
AGAGACATGAATACAAACCA+TGG - Chr1:62381984-62382003 MsG0180003444.01.T01:intron 35.0%
AGAGGAAATAGCTCAGTATT+TGG - Chr1:62377850-62377869 MsG0180003444.01.T01:CDS 35.0%
AGCACCTATAGTAGAAAAGT+TGG + Chr1:62384070-62384089 None:intergenic 35.0%
ATACCTCCCAATATTCTACA+TGG + Chr1:62380772-62380791 None:intergenic 35.0%
ATAGTTTATGCACCAAGGTT+TGG + Chr1:62379411-62379430 None:intergenic 35.0%
ATCCTTACCAAACATCTTGA+TGG - Chr1:62379688-62379707 MsG0180003444.01.T01:intron 35.0%
ATCTAATACGTGGAGTAATG+TGG - Chr1:62381017-62381036 MsG0180003444.01.T01:intron 35.0%
CAAAGATCAGAGACAGAAAT+TGG - Chr1:62382070-62382089 MsG0180003444.01.T01:CDS 35.0%
CAATAACAAACCTGTGATCT+AGG - Chr1:62381123-62381142 MsG0180003444.01.T01:intron 35.0%
CGCAAATACTATCTAGTCTA+GGG - Chr1:62377502-62377521 MsG0180003444.01.T01:three_prime_UTR 35.0%
CTCAAGGAAAATTACTGAAG+AGG - Chr1:62377832-62377851 MsG0180003444.01.T01:CDS 35.0%
CTGATGATAGTAGTAGTGAT+AGG - Chr1:62377789-62377808 MsG0180003444.01.T01:three_prime_UTR 35.0%
CTTGATCAATATCTTCATGC+AGG - Chr1:62382618-62382637 MsG0180003444.01.T01:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG + Chr1:62384045-62384064 None:intergenic 35.0%
GAAGAAGGAGATGTAATGTT+TGG - Chr1:62383639-62383658 MsG0180003444.01.T01:intron 35.0%
GCGAACAATCCATTAAGTTA+TGG + Chr1:62382984-62383003 None:intergenic 35.0%
GCTATATAGGGTTGAATGTT+GGG - Chr1:62382299-62382318 MsG0180003444.01.T01:CDS 35.0%
GCTGAATAAGTTTATTTCGG+TGG - Chr1:62378498-62378517 MsG0180003444.01.T01:CDS 35.0%
GTAAACTGTAGGATACAACT+AGG - Chr1:62382170-62382189 MsG0180003444.01.T01:intron 35.0%
GTTAATGCTACGAAACCATA+TGG - Chr1:62381783-62381802 MsG0180003444.01.T01:intron 35.0%
TAAAAGAATATAGCCGAGAC+AGG + Chr1:62379371-62379390 None:intergenic 35.0%
TAATGCTACGAAACCATATG+GGG - Chr1:62381785-62381804 MsG0180003444.01.T01:intron 35.0%
TACCTCCCAATATTCTACAT+GGG + Chr1:62380771-62380790 None:intergenic 35.0%
TAGAAGCGAAATTACGTTCT+GGG - Chr1:62379336-62379355 MsG0180003444.01.T01:intron 35.0%
TAGTTTATGCACCAAGGTTT+GGG + Chr1:62379410-62379429 None:intergenic 35.0%
TCAAATGACTCGAATCCATT+TGG - Chr1:62378168-62378187 MsG0180003444.01.T01:CDS 35.0%
TCATCATAATCAATAACCCG+GGG + Chr1:62379126-62379145 None:intergenic 35.0%
TCATGTTATGAAATCTGAGG+AGG - Chr1:62383118-62383137 MsG0180003444.01.T01:intron 35.0%
TCGCAAATACTATCTAGTCT+AGG - Chr1:62377501-62377520 MsG0180003444.01.T01:three_prime_UTR 35.0%
TCTAACATCAACAACCATGA+AGG - Chr1:62380126-62380145 MsG0180003444.01.T01:intron 35.0%
TCTAATACGTGGAGTAATGT+GGG - Chr1:62381018-62381037 MsG0180003444.01.T01:intron 35.0%
TCTTCTTACAACGGTATCTA+CGG - Chr1:62384002-62384021 MsG0180003444.01.T01:intron 35.0%
TGCTATATAGGGTTGAATGT+TGG - Chr1:62382298-62382317 MsG0180003444.01.T01:intron 35.0%
TGCTCATGTTATGAAATCTG+AGG - Chr1:62383115-62383134 MsG0180003444.01.T01:intron 35.0%
TGGACTGCACAAAAAATATC+AGG + Chr1:62383249-62383268 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + Chr1:62384050-62384069 None:intergenic 35.0%
TTAACCTTGAAGACCATGTA+TGG + Chr1:62379745-62379764 None:intergenic 35.0%
TTATTCAGCAACCAGCAATA+GGG + Chr1:62378487-62378506 None:intergenic 35.0%
TTCATGGTTGTTGATGTTAG+AGG + Chr1:62380127-62380146 None:intergenic 35.0%
! AAACACTTTGGGAATAGCAT+TGG - Chr1:62381426-62381445 MsG0180003444.01.T01:intron 35.0%
! AAATCTTTTGTAGCCCCATA+TGG + Chr1:62381801-62381820 None:intergenic 35.0%
! AAGAAGTATGGTCAATGTTG+TGG - Chr1:62382337-62382356 MsG0180003444.01.T01:CDS 35.0%
! AATCTGGTTTGTATAGAGAG+GGG - Chr1:62380398-62380417 MsG0180003444.01.T01:intron 35.0%
! ATATCATGATTTGGGTACCT+TGG - Chr1:62382112-62382131 MsG0180003444.01.T01:intron 35.0%
! ATGAAACAGTTCTGGTGAAA+AGG + Chr1:62383352-62383371 None:intergenic 35.0%
! CAAAGAAACTTTTTGTGGAG+AGG - Chr1:62378356-62378375 MsG0180003444.01.T01:intron 35.0%
! CAAATGCTTGCGTAACATTT+TGG + Chr1:62383051-62383070 None:intergenic 35.0%
! CAACTTTTCTACTCAGATCA+TGG - Chr1:62379912-62379931 MsG0180003444.01.T01:intron 35.0%
! CAATCTGGTTTGTATAGAGA+GGG - Chr1:62380397-62380416 MsG0180003444.01.T01:intron 35.0%
! CTCTTCAGTAATTTTCCTTG+AGG + Chr1:62377834-62377853 None:intergenic 35.0%
! GTTTCATGGTGATGAAAATG+AGG - Chr1:62383365-62383384 MsG0180003444.01.T01:intron 35.0%
! GTTTCTCGAATGGTTTTCTT+AGG - Chr1:62383934-62383953 MsG0180003444.01.T01:CDS 35.0%
! TATCATGATTTGGGTACCTT+GGG - Chr1:62382113-62382132 MsG0180003444.01.T01:intron 35.0%
! TCAATCTGGTTTGTATAGAG+AGG - Chr1:62380396-62380415 MsG0180003444.01.T01:intron 35.0%
! TCCATTATTTGCTGCAATAC+AGG - Chr1:62383004-62383023 MsG0180003444.01.T01:intron 35.0%
! TCTGAAATTAGATTGCGTGA+AGG - Chr1:62379646-62379665 MsG0180003444.01.T01:intron 35.0%
! TGCAATACAGGCTTGTTTAA+AGG - Chr1:62383016-62383035 MsG0180003444.01.T01:intron 35.0%
! TTTTCACCAGAACTGTTTCA+TGG - Chr1:62383351-62383370 MsG0180003444.01.T01:intron 35.0%
!! AGTACTCTGAGATATATGTG+AGG - Chr1:62381752-62381771 MsG0180003444.01.T01:intron 35.0%
!! CTAGATCACAGGTTTGTTAT+TGG + Chr1:62381125-62381144 None:intergenic 35.0%
!! GATTTTGAAAAGGCATACAG+TGG - Chr1:62381687-62381706 MsG0180003444.01.T01:intron 35.0%
!! GTACTCTGAGATATATGTGA+GGG - Chr1:62381753-62381772 MsG0180003444.01.T01:intron 35.0%
!! TACTCTGAGATATATGTGAG+GGG - Chr1:62381754-62381773 MsG0180003444.01.T01:intron 35.0%
!! TGTTGAATAAACCGGTTTTG+CGG + Chr1:62381196-62381215 None:intergenic 35.0%
!! TTGGATGACACTCTAAAGTT+AGG + Chr1:62379826-62379845 None:intergenic 35.0%
!!! ACCTTAGAAGTTGGTTTTGT+AGG + Chr1:62380941-62380960 None:intergenic 35.0%
!!! CCTTAGAAGTTGGTTTTGTA+GGG + Chr1:62380940-62380959 None:intergenic 35.0%
!!! GTGAATGCATCTACTTTTTC+TGG - Chr1:62380087-62380106 MsG0180003444.01.T01:intron 35.0%
!!! TGGTTTTGTAGGGTTGAATT+AGG + Chr1:62380930-62380949 None:intergenic 35.0%
!!! TGTTCTTTGGTTTTGTGTTC+AGG - Chr1:62378098-62378117 MsG0180003444.01.T01:intron 35.0%
!!! TTTTGAGATGAAAGCCATGA+AGG - Chr1:62383602-62383621 MsG0180003444.01.T01:intron 35.0%
AAAGAGACAGAGAGAAAGGA+TGG - Chr1:62378919-62378938 MsG0180003444.01.T01:CDS 40.0%
AACAAACCTGTGATCTAGGA+TGG - Chr1:62381127-62381146 MsG0180003444.01.T01:intron 40.0%
AACCCATGTAGAATATTGGG+AGG - Chr1:62380766-62380785 MsG0180003444.01.T01:intron 40.0%
AACTAGGAGGGTGAGTTAAT+CGG - Chr1:62382186-62382205 MsG0180003444.01.T01:intron 40.0%
AACTGTAGGATACAACTAGG+AGG - Chr1:62382173-62382192 MsG0180003444.01.T01:intron 40.0%
AAGAAGTAGAAGATGAGGCT+GGG - Chr1:62383325-62383344 MsG0180003444.01.T01:intron 40.0%
AAGACCAGCCATGCTATATA+GGG - Chr1:62382287-62382306 MsG0180003444.01.T01:intron 40.0%
AAGATGCAATTGATCGAGCT+AGG - Chr1:62382686-62382705 MsG0180003444.01.T01:CDS 40.0%
AAGTATGGTCAATGTTGTGG+AGG - Chr1:62382340-62382359 MsG0180003444.01.T01:CDS 40.0%
AATGCAGGCGGAAATTGAAA+AGG - Chr1:62379209-62379228 MsG0180003444.01.T01:intron 40.0%
AATTTATCTTCGCCCTCTGA+TGG + Chr1:62383089-62383108 None:intergenic 40.0%
ACCGGCAATGTTGTATGATA+CGG + Chr1:62384217-62384236 None:intergenic 40.0%
ACGGAAAAATAACGAACCTG+CGG + Chr1:62377420-62377439 None:intergenic 40.0%
ACTAGAGACTAGTGCTTACA+AGG + Chr1:62381271-62381290 None:intergenic 40.0%
ACTAGTTAGTAGTGGCAAGT+TGG + Chr1:62379038-62379057 None:intergenic 40.0%
ACTCCTTCTGTTGAGTGATT+GGG - Chr1:62382642-62382661 MsG0180003444.01.T01:intron 40.0%
ACTGTAGGATACAACTAGGA+GGG - Chr1:62382174-62382193 MsG0180003444.01.T01:intron 40.0%
AGAACACGGTTGGAGAATTA+CGG + Chr1:62377394-62377413 None:intergenic 40.0%
AGATAGAAAGTTGCAGCAGA+TGG - Chr1:62380370-62380389 MsG0180003444.01.T01:intron 40.0%
AGATGCAATTGATCGAGCTA+GGG - Chr1:62382687-62382706 MsG0180003444.01.T01:CDS 40.0%
AGCCATCAAGATGTTTGGTA+AGG + Chr1:62379693-62379712 None:intergenic 40.0%
AGCTCAGTATTTGGCGAAAA+AGG - Chr1:62377859-62377878 MsG0180003444.01.T01:CDS 40.0%
AGGATATTGCATGGAGAAGA+TGG + Chr1:62379979-62379998 None:intergenic 40.0%
AGGTGAAGAAGTAGAAGATG+AGG - Chr1:62383320-62383339 MsG0180003444.01.T01:intron 40.0%
AGTAATGTGGGTGGAATACA+TGG - Chr1:62381030-62381049 MsG0180003444.01.T01:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + Chr1:62383964-62383983 None:intergenic 40.0%
AGTGACAGAAATTGTGGTCA+TGG + Chr1:62380222-62380241 None:intergenic 40.0%
ATAGCGTGAACATTTGCACA+TGG - Chr1:62381081-62381100 MsG0180003444.01.T01:intron 40.0%
ATCAGAGCCATCAAGATGTT+TGG + Chr1:62379698-62379717 None:intergenic 40.0%
ATCAGAGGGCGAAGATAAAT+TGG - Chr1:62383088-62383107 MsG0180003444.01.T01:intron 40.0%
ATGAAAGCCATGAAGGCTAT+GGG - Chr1:62383609-62383628 MsG0180003444.01.T01:intron 40.0%
ATGCATGCATACTGCATATG+AGG + Chr1:62378323-62378342 None:intergenic 40.0%
ATGTGAATTATCATCTCCGG+TGG - Chr1:62377347-62377366 MsG0180003444.01.T01:three_prime_UTR 40.0%
ATTAAAGCAGAGGGTCAAGA+AGG - Chr1:62383300-62383319 MsG0180003444.01.T01:intron 40.0%
ATTGAGCGTGATGTTGTTCA+AGG - Chr1:62378860-62378879 MsG0180003444.01.T01:CDS 40.0%
ATTGAGTCAGAAATGCGTAC+TGG - Chr1:62382838-62382857 MsG0180003444.01.T01:intron 40.0%
CACTTACTTTACTCTCGTGT+TGG - Chr1:62384172-62384191 MsG0180003444.01.T01:five_prime_UTR 40.0%
CATCATAATCAATAACCCGG+GGG + Chr1:62379125-62379144 None:intergenic 40.0%
CCCTACAAAACCAACTTCTA+AGG - Chr1:62380937-62380956 MsG0180003444.01.T01:intron 40.0%
CGAGAGTAAAGTAAGTGTAG+CGG + Chr1:62384169-62384188 None:intergenic 40.0%
CTAAGGCAGGTGGAATAATA+GGG - Chr1:62381355-62381374 MsG0180003444.01.T01:intron 40.0%
CTAGAAGCGAAATTACGTTC+TGG - Chr1:62379335-62379354 MsG0180003444.01.T01:intron 40.0%
CTGAGAAGAATAGAATGGGT+AGG - Chr1:62377609-62377628 MsG0180003444.01.T01:three_prime_UTR 40.0%
CTTATTCAGCAACCAGCAAT+AGG + Chr1:62378488-62378507 None:intergenic 40.0%
CTTCTTACAACGGTATCTAC+GGG - Chr1:62384003-62384022 MsG0180003444.01.T01:intron 40.0%
GAAATCTGAGGAGGATATTG+AGG - Chr1:62383127-62383146 MsG0180003444.01.T01:intron 40.0%
GAAGAAACGAAGAGAAGAGA+GGG - Chr1:62379233-62379252 MsG0180003444.01.T01:intron 40.0%
GAATGGGTAGGAAAGAAAGA+AGG - Chr1:62377621-62377640 MsG0180003444.01.T01:three_prime_UTR 40.0%
GATAGGGAGATGTAAACTGT+AGG - Chr1:62382159-62382178 MsG0180003444.01.T01:intron 40.0%
GATAGTAGTAGTGATAGGGA+TGG - Chr1:62377794-62377813 MsG0180003444.01.T01:three_prime_UTR 40.0%
GCCAACCCATGTAGAATATT+GGG - Chr1:62380763-62380782 MsG0180003444.01.T01:intron 40.0%
GCCTGTATTGCAGCAAATAA+TGG + Chr1:62383008-62383027 None:intergenic 40.0%
GGTAAGGATATCAATTGGCT+TGG + Chr1:62379677-62379696 None:intergenic 40.0%
GTAGGAAAGAAAGAAGGAGA+AGG - Chr1:62377627-62377646 MsG0180003444.01.T01:three_prime_UTR 40.0%
GTGGTAAGACTAGACAAGAT+AGG + Chr1:62384122-62384141 None:intergenic 40.0%
GTGTACCAACACTTAGTAGA+AGG - Chr1:62382043-62382062 MsG0180003444.01.T01:intron 40.0%
TAAGACCAGCCATGCTATAT+AGG - Chr1:62382286-62382305 MsG0180003444.01.T01:intron 40.0%
TCATCACCATGAAACAGTTC+TGG + Chr1:62383360-62383379 None:intergenic 40.0%
TCCCAATATTCTACATGGGT+TGG + Chr1:62380767-62380786 None:intergenic 40.0%
TCCGTATCATACAACATTGC+CGG - Chr1:62384213-62384232 MsG0180003444.01.T01:five_prime_UTR 40.0%
TCTTGACCCTCTGCTTTAAT+GGG + Chr1:62383300-62383319 None:intergenic 40.0%
TGAACCATACATGGTCTTCA+AGG - Chr1:62379738-62379757 MsG0180003444.01.T01:intron 40.0%
TGAAGAAACGAAGAGAAGAG+AGG - Chr1:62379232-62379251 MsG0180003444.01.T01:intron 40.0%
TGACGTAACTAAACAAGCCA+TGG + Chr1:62380805-62380824 None:intergenic 40.0%
TGCAAAAGCTTCTTCACATC+TGG + Chr1:62382778-62382797 None:intergenic 40.0%
TGGAAAGCAGTGAAGAAAAC+AGG + Chr1:62380323-62380342 None:intergenic 40.0%
TGTTGTATGATACGGAGTGT+TGG + Chr1:62384209-62384228 None:intergenic 40.0%
TTCCTGTGAATGTACCATTG+TGG + Chr1:62383499-62383518 None:intergenic 40.0%
TTCTTGACCCTCTGCTTTAA+TGG + Chr1:62383301-62383320 None:intergenic 40.0%
! AGATGTGAAGAAGCTTTTGC+AGG - Chr1:62382777-62382796 MsG0180003444.01.T01:intron 40.0%
! AGTTAATCGGAGAGTTGGTT+TGG - Chr1:62382199-62382218 MsG0180003444.01.T01:intron 40.0%
! ATAGGCTAACTTGTCCACAA+TGG - Chr1:62383482-62383501 MsG0180003444.01.T01:intron 40.0%
! ATCTGGTTTGTATAGAGAGG+GGG - Chr1:62380399-62380418 MsG0180003444.01.T01:intron 40.0%
! ATGTGAAGAAGCTTTTGCAG+GGG - Chr1:62382779-62382798 MsG0180003444.01.T01:intron 40.0%
! CTATAGTTGATGTCTCAGGT+GGG - Chr1:62380991-62381010 MsG0180003444.01.T01:intron 40.0%
! GATGTGAAGAAGCTTTTGCA+GGG - Chr1:62382778-62382797 MsG0180003444.01.T01:intron 40.0%
! GTTAATCGGAGAGTTGGTTT+GGG - Chr1:62382200-62382219 MsG0180003444.01.T01:intron 40.0%
! GTTGTATGATACGGAGTGTT+GGG + Chr1:62384208-62384227 None:intergenic 40.0%
! TACCGCTTATCGTTTTATCC+TGG - Chr1:62381866-62381885 MsG0180003444.01.T01:CDS 40.0%
! TCTATAGTTGATGTCTCAGG+TGG - Chr1:62380990-62381009 MsG0180003444.01.T01:intron 40.0%
!! AAAACTGGCTTGTAAGGTGA+GGG - Chr1:62381230-62381249 MsG0180003444.01.T01:intron 40.0%
!! ACTCTGAGATATATGTGAGG+GGG - Chr1:62381755-62381774 MsG0180003444.01.T01:intron 40.0%
!! AGCAAAGCTTGTTGAGTACT+GGG - Chr1:62382864-62382883 MsG0180003444.01.T01:intron 40.0%
!! CAAAACCAACTTCTAAGGTG+AGG - Chr1:62380942-62380961 MsG0180003444.01.T01:intron 40.0%
!! GAGGTATCTTCCTTTTTCCA+TGG - Chr1:62380785-62380804 MsG0180003444.01.T01:intron 40.0%
!! GGCTGGTCTTATGCTTTAAA+GGG + Chr1:62382277-62382296 None:intergenic 40.0%
!! TCTCTAGGATATGCAAAACC+AGG + Chr1:62381887-62381906 None:intergenic 40.0%
!! TCTTGATGGCTCTGATGATT+TGG - Chr1:62379702-62379721 MsG0180003444.01.T01:intron 40.0%
!! TGGCTGGTCTTATGCTTTAA+AGG + Chr1:62382278-62382297 None:intergenic 40.0%
!!! AGTTTTTTCGTTTGGAGGGT+GGG - Chr1:62378605-62378624 MsG0180003444.01.T01:intron 40.0%
!!! TAGTTTTTTCGTTTGGAGGG+TGG - Chr1:62378604-62378623 MsG0180003444.01.T01:intron 40.0%
AATACGTGGAGTAATGTGGG+TGG - Chr1:62381021-62381040 MsG0180003444.01.T01:intron 45.0%
AATTGTGGTCATGGCAGTTG+TGG + Chr1:62380213-62380232 None:intergenic 45.0%
ACAACCATGAAGGCAGTGTA+TGG - Chr1:62380136-62380155 MsG0180003444.01.T01:intron 45.0%
ACATTGCCGGTCATACTACA+TGG - Chr1:62384226-62384245 MsG0180003444.01.T01:five_prime_UTR 45.0%
ACGCCTTAAGAAACCATCAG+AGG - Chr1:62383073-62383092 MsG0180003444.01.T01:intron 45.0%
ACGCTATAGATGTCCAGACA+TGG + Chr1:62381068-62381087 None:intergenic 45.0%
ACTCCCAATCACTCAACAGA+AGG + Chr1:62382648-62382667 None:intergenic 45.0%
AGACTAGTGCTTACAAGGCT+TGG + Chr1:62381266-62381285 None:intergenic 45.0%
AGATATATGTGAGGGGGTCA+CGG - Chr1:62381761-62381780 MsG0180003444.01.T01:intron 45.0%
AGATCAAATGGAGGAGAGTC+AGG + Chr1:62383980-62383999 None:intergenic 45.0%
AGCACGACATGAGGAAGAAA+TGG - Chr1:62379266-62379285 MsG0180003444.01.T01:intron 45.0%
AGCAGTGAAGAAAACAGGTG+AGG + Chr1:62380318-62380337 None:intergenic 45.0%
AGGTGGGAACATCTAATACG+TGG - Chr1:62381007-62381026 MsG0180003444.01.T01:intron 45.0%
AGTGAAGAAAACAGGTGAGG+TGG + Chr1:62380315-62380334 None:intergenic 45.0%
ATGATTCCGATAGAATCCGG+AGG - Chr1:62377693-62377712 MsG0180003444.01.T01:three_prime_UTR 45.0%
ATTAGCTCCCATAGCCTTCA+TGG + Chr1:62383619-62383638 None:intergenic 45.0%
CACCAAGGTTTGGGAATAAC+TGG + Chr1:62379401-62379420 None:intergenic 45.0%
CACTCCTTCTGTTGAGTGAT+TGG - Chr1:62382641-62382660 MsG0180003444.01.T01:intron 45.0%
CCGATGATTCCGATAGAATC+CGG - Chr1:62377690-62377709 MsG0180003444.01.T01:three_prime_UTR 45.0%
CCGGATTCTATCGGAATCAT+CGG + Chr1:62377693-62377712 None:intergenic 45.0%
CCTCCGCATATATAAAGCCA+AGG - Chr1:62382903-62382922 MsG0180003444.01.T01:intron 45.0%
CGCCAACCCATGTAGAATAT+TGG - Chr1:62380762-62380781 MsG0180003444.01.T01:intron 45.0%
CGCCTTAAGAAACCATCAGA+GGG - Chr1:62383074-62383093 MsG0180003444.01.T01:intron 45.0%
CGCTATAGATGTCCAGACAT+GGG + Chr1:62381067-62381086 None:intergenic 45.0%
CTCATACTAAACGCTCTCTG+CGG - Chr1:62380256-62380275 MsG0180003444.01.T01:intron 45.0%
CTCTGGTGCAGAAGTAAATC+TGG - Chr1:62383662-62383681 MsG0180003444.01.T01:intron 45.0%
CTGGGAAAAAAGAGAAGTGG+AGG - Chr1:62379510-62379529 MsG0180003444.01.T01:intron 45.0%
GAAAAATAACGAACCTGCGG+CGG + Chr1:62377417-62377436 None:intergenic 45.0%
GAAGAAGTAGAAGATGAGGC+TGG - Chr1:62383324-62383343 MsG0180003444.01.T01:intron 45.0%
GAGACGAATTCAGGAAGCAA+TGG - Chr1:62383551-62383570 MsG0180003444.01.T01:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + Chr1:62383970-62383989 None:intergenic 45.0%
GATGAAAGCCATGAAGGCTA+TGG - Chr1:62383608-62383627 MsG0180003444.01.T01:intron 45.0%
GCTAAGGCAGGTGGAATAAT+AGG - Chr1:62381354-62381373 MsG0180003444.01.T01:intron 45.0%
GCTATGGGAGCTAATGAAGA+AGG - Chr1:62383624-62383643 MsG0180003444.01.T01:intron 45.0%
GGAAGCTATTGATCCTGAAG+AGG - Chr1:62383386-62383405 MsG0180003444.01.T01:CDS 45.0%
GGACTGGGAAAAAAGAGAAG+TGG - Chr1:62379507-62379526 MsG0180003444.01.T01:intron 45.0%
GGATTGCGAAGAAGTTGACT+CGG + Chr1:62377672-62377691 None:intergenic 45.0%
GGGTTTGACAGTGAACGAAA+TGG - Chr1:62380691-62380710 MsG0180003444.01.T01:intron 45.0%
GTAGGAAGAGAAAGTCCTCA+AGG - Chr1:62377816-62377835 MsG0180003444.01.T01:exon 45.0%
GTAGTAGTGATAGGGATGGT+AGG - Chr1:62377798-62377817 MsG0180003444.01.T01:three_prime_UTR 45.0%
GTCCACAATGGTACATTCAC+AGG - Chr1:62383494-62383513 MsG0180003444.01.T01:intron 45.0%
GTGAGCCTTCTACTAAGTGT+TGG + Chr1:62382051-62382070 None:intergenic 45.0%
GTTTGTATAGAGAGGGGGAA+TGG - Chr1:62380404-62380423 MsG0180003444.01.T01:intron 45.0%
TAGAGTCCATCCTAGATCAC+AGG + Chr1:62381136-62381155 None:intergenic 45.0%
TCAACCCTATATAGCATGGC+TGG + Chr1:62382294-62382313 None:intergenic 45.0%
TCGCTGAGTGACAGAAATTG+TGG + Chr1:62380228-62380247 None:intergenic 45.0%
TGAACAATGGCACTGTCTCT+AGG + Chr1:62381902-62381921 None:intergenic 45.0%
TGCAGAATTGGAAGCTTTGC+AGG - Chr1:62382810-62382829 MsG0180003444.01.T01:intron 45.0%
TGCCAGTTATTCCCAAACCT+TGG - Chr1:62379396-62379415 MsG0180003444.01.T01:intron 45.0%
TGGTAGGCACTAGGTAGTTA+TGG - Chr1:62378383-62378402 MsG0180003444.01.T01:intron 45.0%
TTGAAGGCTCATACTGTGTC+TGG - Chr1:62378141-62378160 MsG0180003444.01.T01:intron 45.0%
TTGAGATTCCTCCCTATTGC+TGG - Chr1:62378473-62378492 MsG0180003444.01.T01:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - Chr1:62383824-62383843 MsG0180003444.01.T01:CDS 45.0%
! AAGTAAGTGTAGCGGAGATG+AGG + Chr1:62384161-62384180 None:intergenic 45.0%
! ACTTGAGAAAGCACGACATG+AGG - Chr1:62379257-62379276 MsG0180003444.01.T01:intron 45.0%
! ACTTTTTGTGGAGAGGGTAG+TGG - Chr1:62378363-62378382 MsG0180003444.01.T01:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - Chr1:62383823-62383842 MsG0180003444.01.T01:CDS 45.0%
! GGAGATGTAATGTTTGGCTC+TGG - Chr1:62383645-62383664 MsG0180003444.01.T01:intron 45.0%
! GTCATGGCAGTTGTGGATTT+TGG + Chr1:62380206-62380225 None:intergenic 45.0%
!! AAGATGGATTGATGCAGTCG+TGG + Chr1:62379963-62379982 None:intergenic 45.0%
!! ACCCTCTGCTTTAATGGGTT+CGG + Chr1:62383295-62383314 None:intergenic 45.0%
!! AGATGGATTGATGCAGTCGT+GGG + Chr1:62379962-62379981 None:intergenic 45.0%
!! AGTTGTTTTGTTGGCGTGAC+TGG - Chr1:62379055-62379074 MsG0180003444.01.T01:intron 45.0%
!! ATATTCTACATGGGTTGGCG+TGG + Chr1:62380762-62380781 None:intergenic 45.0%
!! CAAAACTGGCTTGTAAGGTG+AGG - Chr1:62381229-62381248 MsG0180003444.01.T01:intron 45.0%
!! CAGCAAAGCTTGTTGAGTAC+TGG - Chr1:62382863-62382882 MsG0180003444.01.T01:intron 45.0%
!! CCTCACAAAACTGGCTTGTA+AGG - Chr1:62381224-62381243 MsG0180003444.01.T01:intron 45.0%
!! CCTTACAAGCCAGTTTTGTG+AGG + Chr1:62381227-62381246 None:intergenic 45.0%
!! CCTTGGCTTTATATATGCGG+AGG + Chr1:62382906-62382925 None:intergenic 45.0%
!! TGTGGATTTTGGTGCGATGA+AGG + Chr1:62380195-62380214 None:intergenic 45.0%
!! TTCTAAGGTGAGGACTGCTT+AGG - Chr1:62380952-62380971 MsG0180003444.01.T01:intron 45.0%
!!! CTTCTCTTTTTTCCCAGTCC+TGG + Chr1:62379507-62379526 None:intergenic 45.0%
ACCACTCCTCCGGATTCTAT+CGG + Chr1:62377702-62377721 None:intergenic 50.0%
AGAATATAGCCGAGACAGGC+AGG + Chr1:62379367-62379386 None:intergenic 50.0%
AGAGCAGCAGAGACGAATTC+AGG - Chr1:62383542-62383561 MsG0180003444.01.T01:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG + Chr1:62384141-62384160 None:intergenic 50.0%
AGGATTTGACACCTGAAGCG+TGG - Chr1:62381331-62381350 MsG0180003444.01.T01:intron 50.0%
AGTAGAGCTCTGTCCTCTTC+AGG + Chr1:62383402-62383421 None:intergenic 50.0%
ATAATCAATAACCCGGGGGC+TGG + Chr1:62379121-62379140 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + Chr1:62383825-62383844 None:intergenic 50.0%
CCCGAACCCATTAAAGCAGA+GGG - Chr1:62383291-62383310 MsG0180003444.01.T01:intron 50.0%
CGCCCTCTGATGGTTTCTTA+AGG + Chr1:62383079-62383098 None:intergenic 50.0%
CTGCTTTCCAACTGCAGTGA+TGG - Chr1:62380333-62380352 MsG0180003444.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr1:62383828-62383847 MsG0180003444.01.T01:CDS 50.0%
GCAGCAGATGGTGTTCAATC+TGG - Chr1:62380382-62380401 MsG0180003444.01.T01:intron 50.0%
GCAGTCCTCACCTTAGAAGT+TGG + Chr1:62380950-62380969 None:intergenic 50.0%
GGAGTGGTCACCATAGTGAT+CGG - Chr1:62377714-62377733 MsG0180003444.01.T01:three_prime_UTR 50.0%
GGATTTGACACCTGAAGCGT+GGG - Chr1:62381332-62381351 MsG0180003444.01.T01:intron 50.0%
GGGGAAGACACATGCAGAAT+TGG - Chr1:62382798-62382817 MsG0180003444.01.T01:intron 50.0%
GGGTGAGTTAATCGGAGAGT+TGG - Chr1:62382194-62382213 MsG0180003444.01.T01:intron 50.0%
GTGCCAATGATCAACACCAC+CGG + Chr1:62377366-62377385 None:intergenic 50.0%
GTTGCCATACACTGCCTTCA+TGG + Chr1:62380143-62380162 None:intergenic 50.0%
TAATCAATAACCCGGGGGCT+GGG + Chr1:62379120-62379139 None:intergenic 50.0%
TCCCGAACCCATTAAAGCAG+AGG - Chr1:62383290-62383309 MsG0180003444.01.T01:intron 50.0%
TCTCTGTTCAGCAAGCACCT+CGG + Chr1:62382734-62382753 None:intergenic 50.0%
TGAAGAGGACAGAGCTCTAC+TGG - Chr1:62383401-62383420 MsG0180003444.01.T01:CDS 50.0%
TGTAAGGTGAGGGTTGTCCA+AGG - Chr1:62381240-62381259 MsG0180003444.01.T01:intron 50.0%
TGTCCGAGTCCGATTCATGT+CGG + Chr1:62377760-62377779 None:intergenic 50.0%
TTCAGCAACCAGCAATAGGG+AGG + Chr1:62378484-62378503 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - Chr1:62383822-62383841 MsG0180003444.01.T01:CDS 50.0%
! TGGAGGTATGGCTGCTTGAA+TGG - Chr1:62379527-62379546 MsG0180003444.01.T01:intron 50.0%
! TTTGTGGAGAGGGTAGTGGT+AGG - Chr1:62378367-62378386 MsG0180003444.01.T01:intron 50.0%
!! AACCGGTTTTGCGGTTGAGT+TGG + Chr1:62381187-62381206 None:intergenic 50.0%
!! ACCGGTTTTGCGGTTGAGTT+GGG + Chr1:62381186-62381205 None:intergenic 50.0%
!! AGGTGCTACTCTCTCTCGAA+TGG - Chr1:62384083-62384102 MsG0180003444.01.T01:intron 50.0%
!! CCCTCTGCTTTAATGGGTTC+GGG + Chr1:62383294-62383313 None:intergenic 50.0%
!! GTATGATACGGAGTGTTGGG+CGG + Chr1:62384205-62384224 None:intergenic 50.0%
!! TCTCCGGTGGTGTTGATCAT+TGG - Chr1:62377360-62377379 MsG0180003444.01.T01:three_prime_UTR 50.0%
AATCAATAACCCGGGGGCTG+GGG + Chr1:62379119-62379138 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr1:62383836-62383855 MsG0180003444.01.T01:CDS 55.0%
ACTCGGTCCATCACTGCAGT+TGG + Chr1:62380343-62380362 None:intergenic 55.0%
ATAGTGATCGGCGGTCACAG+AGG - Chr1:62377726-62377745 MsG0180003444.01.T01:three_prime_UTR 55.0%
ATATAGCCGAGACAGGCAGG+TGG + Chr1:62379364-62379383 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr1:62383837-62383856 None:intergenic 55.0%
ATTGATCGAGCTAGGGTGCG+TGG - Chr1:62382694-62382713 MsG0180003444.01.T01:CDS 55.0%
CACTATGGTGACCACTCCTC+CGG + Chr1:62377712-62377731 None:intergenic 55.0%
CAGCAGCACTGTGACGACAA+CGG + Chr1:62380287-62380306 None:intergenic 55.0%
CAGTCGTGGGTCGAAGACAT+GGG + Chr1:62379949-62379968 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr1:62383830-62383849 None:intergenic 55.0%
CGGAGATGAGGATGTTGCGT+TGG + Chr1:62384149-62384168 None:intergenic 55.0%
CGGTTGGAGAATTACGGCGA+CGG + Chr1:62377388-62377407 None:intergenic 55.0%
GAGACGGAGCCGACATGAAT+CGG - Chr1:62377748-62377767 MsG0180003444.01.T01:three_prime_UTR 55.0%
GAGCCGACATGAATCGGACT+CGG - Chr1:62377754-62377773 MsG0180003444.01.T01:three_prime_UTR 55.0%
GATCTCAACACGCCCATGTC+TGG - Chr1:62381052-62381071 MsG0180003444.01.T01:intron 55.0%
GCCCAACTCAACCGCAAAAC+CGG - Chr1:62381182-62381201 MsG0180003444.01.T01:intron 55.0%
GTGCTTACAAGGCTTGGCCT+TGG + Chr1:62381260-62381279 None:intergenic 55.0%
GTGGTCACCATAGTGATCGG+CGG - Chr1:62377717-62377736 MsG0180003444.01.T01:three_prime_UTR 55.0%
TCCGATAGAATCCGGAGGAG+TGG - Chr1:62377698-62377717 MsG0180003444.01.T01:three_prime_UTR 55.0%
TCGAGCTGAGTTCCAGGACT+GGG - Chr1:62379492-62379511 MsG0180003444.01.T01:intron 55.0%
TCTGTGACCGCCGATCACTA+TGG + Chr1:62377727-62377746 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr1:62383836-62383855 None:intergenic 55.0%
! AGAGGGTAGTGGTAGGCACT+AGG - Chr1:62378374-62378393 MsG0180003444.01.T01:intron 55.0%
! GAGGTGCTTGCTGAACAGAG+AGG - Chr1:62382733-62382752 MsG0180003444.01.T01:intron 55.0%
! GGCGAAAAAGGCGCAGAGAA+AGG - Chr1:62377871-62377890 MsG0180003444.01.T01:CDS 55.0%
ACGTGCTCGAGCTGAGTTCC+AGG - Chr1:62379486-62379505 MsG0180003444.01.T01:intron 60.0%
ATCGGCGGTCACAGAGGAGA+CGG - Chr1:62377732-62377751 MsG0180003444.01.T01:three_prime_UTR 60.0%
CTCGAGCTGAGTTCCAGGAC+TGG - Chr1:62379491-62379510 MsG0180003444.01.T01:intron 60.0%
GCAGTCGTGGGTCGAAGACA+TGG + Chr1:62379950-62379969 None:intergenic 60.0%
TCGTGGGTCGAAGACATGGG+AGG + Chr1:62379946-62379965 None:intergenic 60.0%
TGGAGAAGAACCTCCAGCCG+AGG - Chr1:62382714-62382733 MsG0180003444.01.T01:CDS 60.0%
TGGGTACCACCTGCCTGTCT+CGG - Chr1:62379355-62379374 MsG0180003444.01.T01:intron 60.0%
TGTTCAGCAAGCACCTCGGC+TGG + Chr1:62382730-62382749 None:intergenic 60.0%
! GACACCTGAAGCGTGGGCTA+AGG - Chr1:62381338-62381357 MsG0180003444.01.T01:intron 60.0%
CCTGCCTTAGCCCACGCTTC+AGG + Chr1:62381345-62381364 None:intergenic 65.0%
CCTTCATACACCCCAGCCCC+CGG - Chr1:62379106-62379125 MsG0180003444.01.T01:intron 65.0%
CGAACCTGCGGCGGAGAACA+CGG + Chr1:62377408-62377427 None:intergenic 65.0%
CTTCATACACCCCAGCCCCC+GGG - Chr1:62379107-62379126 MsG0180003444.01.T01:intron 65.0%
TCAGCAAGCACCTCGGCTGG+AGG + Chr1:62382727-62382746 None:intergenic 65.0%
! CCTGAAGCGTGGGCTAAGGC+AGG - Chr1:62381342-62381361 MsG0180003444.01.T01:intron 65.0%
! GAAGCGTGGGCTAAGGCAGG+TGG - Chr1:62381345-62381364 MsG0180003444.01.T01:intron 65.0%
CCAACCGTGTTCTCCGCCGC+AGG - Chr1:62377401-62377420 MsG0180003444.01.T01:three_prime_UTR 70.0%
CCGGGGGCTGGGGTGTATGA+AGG + Chr1:62379109-62379128 None:intergenic 70.0%
CCTGCGGCGGAGAACACGGT+TGG + Chr1:62377404-62377423 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 62377326 62384260 62377326 ID=MsG0180003444.01;Name=MsG0180003444.01
Chr1 mRNA 62377326 62384260 62377326 ID=MsG0180003444.01.T01;Parent=MsG0180003444.01;Name=MsG0180003444.01.T01;_AED=0.48;_eAED=0.48;_QI=137|1|1|1|0.90|0.83|12|496|553
Chr1 exon 62377326 62378070 62377326 ID=MsG0180003444.01.T01:exon:49877;Parent=MsG0180003444.01.T01
Chr1 exon 62378164 62378321 62378164 ID=MsG0180003444.01.T01:exon:49876;Parent=MsG0180003444.01.T01
Chr1 exon 62378425 62378560 62378425 ID=MsG0180003444.01.T01:exon:49875;Parent=MsG0180003444.01.T01
Chr1 exon 62378662 62378946 62378662 ID=MsG0180003444.01.T01:exon:49874;Parent=MsG0180003444.01.T01
Chr1 exon 62380799 62380894 62380799 ID=MsG0180003444.01.T01:exon:49873;Parent=MsG0180003444.01.T01
Chr1 exon 62381827 62381967 62381827 ID=MsG0180003444.01.T01:exon:49872;Parent=MsG0180003444.01.T01
Chr1 exon 62382055 62382117 62382055 ID=MsG0180003444.01.T01:exon:49871;Parent=MsG0180003444.01.T01
Chr1 exon 62382299 62382370 62382299 ID=MsG0180003444.01.T01:exon:49870;Parent=MsG0180003444.01.T01
Chr1 exon 62382646 62382745 62382646 ID=MsG0180003444.01.T01:exon:49869;Parent=MsG0180003444.01.T01
Chr1 exon 62383375 62383466 62383375 ID=MsG0180003444.01.T01:exon:49868;Parent=MsG0180003444.01.T01
Chr1 exon 62383694 62384003 62383694 ID=MsG0180003444.01.T01:exon:49867;Parent=MsG0180003444.01.T01
Chr1 exon 62384164 62384260 62384164 ID=MsG0180003444.01.T01:exon:49866;Parent=MsG0180003444.01.T01
Chr1 five_prime_UTR 62384164 62384260 62384164 ID=MsG0180003444.01.T01:five_prime_utr;Parent=MsG0180003444.01.T01
Chr1 five_prime_UTR 62383964 62384003 62383964 ID=MsG0180003444.01.T01:five_prime_utr;Parent=MsG0180003444.01.T01
Chr1 CDS 62383694 62383963 62383694 ID=MsG0180003444.01.T01:cds;Parent=MsG0180003444.01.T01
Chr1 CDS 62383375 62383466 62383375 ID=MsG0180003444.01.T01:cds;Parent=MsG0180003444.01.T01
Chr1 CDS 62382646 62382745 62382646 ID=MsG0180003444.01.T01:cds;Parent=MsG0180003444.01.T01
Chr1 CDS 62382299 62382370 62382299 ID=MsG0180003444.01.T01:cds;Parent=MsG0180003444.01.T01
Chr1 CDS 62382055 62382117 62382055 ID=MsG0180003444.01.T01:cds;Parent=MsG0180003444.01.T01
Chr1 CDS 62381827 62381967 62381827 ID=MsG0180003444.01.T01:cds;Parent=MsG0180003444.01.T01
Chr1 CDS 62380799 62380894 62380799 ID=MsG0180003444.01.T01:cds;Parent=MsG0180003444.01.T01
Chr1 CDS 62378662 62378946 62378662 ID=MsG0180003444.01.T01:cds;Parent=MsG0180003444.01.T01
Chr1 CDS 62378425 62378560 62378425 ID=MsG0180003444.01.T01:cds;Parent=MsG0180003444.01.T01
Chr1 CDS 62378164 62378321 62378164 ID=MsG0180003444.01.T01:cds;Parent=MsG0180003444.01.T01
Chr1 CDS 62377822 62378070 62377822 ID=MsG0180003444.01.T01:cds;Parent=MsG0180003444.01.T01
Chr1 three_prime_UTR 62377326 62377821 62377326 ID=MsG0180003444.01.T01:three_prime_utr;Parent=MsG0180003444.01.T01
Gene Sequence

>MsG0180003444.01.T01

ATGGGTAGGAAAGAAAGAAGGAGAAGGAAATCGGATGATTCTGCATCCGAGTCAACTTCTTCGCAATCCGATGATTCCGATAGAATCCGGAGGAGTGGTCACCATAGTGATCGGCGGTCACAGAGGAGACGGAGCCGACATGAATCGGACTCGGACAATTCTACTTCTGATGATAGTAGTAGTGATAGGGATGGTAGGAAGAGAAAGTCCTCAAGGAAAATTACTGAAGAGGAAATAGCTCAGTATTTGGCGAAAAAGGCGCAGAGAAAGGCGTTGAAAGTTGCTAAGAAATTGAAGGCTCATACTGTGTCTGGATATTCAAATGACTCGAATCCATTTGGTGATTCCAATCTTAATGAGAAGTTTGTTTGGCGTAAGAAGATTGAGCGTGATGTTGTTCAAGGTGTGCCTATTGATGAATTTTCAGTTAAAGCTGAGAAAAAGAGACAGAGAGAAAGGATGGCGGAAATTGAAAAGGTGAAGAAACGAAGAGAAGAGAGGGCACTTGAGAAAGCACGACATGAGGAAGAAATGGCATTGTTAGCTAGAGAACGTGCTCGAGCTGAGTTCCAGGACTGGGAAAAAAGAGAAGTGGAGTTTCATTTTGATCAAAGCAAGTTTAGGTCTGAAATTAGATTGCGTGAAGGACGTGCCAAGCCAATTGATATCCTTACCAAACATCTTGATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATACATGGTCTTCAAGGGTTTGACAGTGAACGAAATGGAAGAGCTCCATGATGATATCAAAATGCATTTGGACTTTGACAGGGCCACGCCAACCCATGTAGAATATTGGGAGGCACTCCTTCTGTTGAGTGATTGGGAGTTAGCTGAAGCTAGAAAAAAAGATGCAATTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCAGCCGAGGTGCTTGCTGAACAGAGAGGTCTGCATAACAGTGTTGAACCAGATGTGAAGAAGCTTTTGCAGGGGAAGACACATGCAGAATTGGAAGCTTTGCAGGCGCATATTGAGTCAGAAATGCGTACTGGTGCAGCAAAGCTTGTTGAGTACTGGGAGACTGTTTTAAAGTACCTCCGCATATATAAAGCCAAGGCTTGTTTAAAGGAAATTCATGCCAAAATGTTACGCAAGCATTTGCTACGCCTTAAGAAACCATCAGAGGGCGAAGATAAATTGGAAGATGCTCATGTTATGAAATCTGAGGAGGATATTGAGGATTATGTTAAATTCCAATATGCAAAGAGATCACTTTCTCCCGAACCCATTAAAGCAGAGGGTCAAGAAGGTGAAGAAGTAGAAGATGAGGCTGGGTCCTTTTCACCAGAACTGTTTCATGGTGATGAAAATGAGGAAGCTATTGATCCTGAAGAGGACAGAGCTCTACTGGAACAAAAACGTTTGTCTGTAAAAGAAGAGCAGCAGAGACGAATTCAGGAAGCAATGGCATCAAAGCCTGCTCCATCTGAAGATAATTTTGAGATGAAAGCCATGAAGGCTATGGGAGCTAATGAAGAAGGAGATGTAATGTTTGGCTCTGGTGCAGAAGTAAATCTGGATTCACAGGTATCTTGTCTTGTCATTTGTATGATTTTCACACTTGGTAAAATGGGATCAAATGCTTGTTATTTTCCATGA

Protein sequence

>MsG0180003444.01.T01

MGRKERRRRKSDDSASESTSSQSDDSDRIRRSGHHSDRRSQRRRSRHESDSDNSTSDDSSSDRDGRKRKSSRKITEEEIAQYLAKKAQRKALKVAKKLKAHTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVVQGVPIDEFSVKAEKKRQRERMAEIEKVKKRREERALEKARHEEEMALLARERARAEFQDWEKREVEFHFDQSKFRSEIRLREGRAKPIDILTKHLDGSDDLDIEINEPYMVFKGLTVNEMEELHDDIKMHLDFDRATPTHVEYWEALLLLSDWELAEARKKDAIDRARVRGEEPPAEVLAEQRGLHNSVEPDVKKLLQGKTHAELEALQAHIESEMRTGAAKLVEYWETVLKYLRIYKAKACLKEIHAKMLRKHLLRLKKPSEGEDKLEDAHVMKSEEDIEDYVKFQYAKRSLSPEPIKAEGQEGEEVEDEAGSFSPELFHGDENEEAIDPEEDRALLEQKRLSVKEEQQRRIQEAMASKPAPSEDNFEMKAMKAMGANEEGDVMFGSGAEVNLDSQVSCLVICMIFTLGKMGSNACYFP*