AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000824.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000824.01.T01 MTR_1g007740 61.290 62 16 1 42 103 114 167 1.48e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 135 sgRNAs with CRISPR-Local

Find 473 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTCCACTTTCGGATTTC+AGG 0.117373 1:-11715950 MsG0180000824.01.T01:three_prime_UTR
CCTTTACAGGTAGGGATTAT+TGG 0.156909 1:-11717471 MsG0180000824.01.T01:intron
TTTCTTATCCCCATTGGATA+TGG 0.203399 1:-11722643 MsG0180000824.01.T01:CDS
GGGTATTTGTGGATTTATTA+TGG 0.218743 1:-11715598 MsG0180000824.01.T01:three_prime_UTR
CTTGAGGTGACCTCTTATTT+AGG 0.269849 1:+11716476 None:intergenic
CAGACAAAGAGATTCTAAAT+TGG 0.289557 1:+11715566 None:intergenic
ATGAGTCTATTATCCATTCT+AGG 0.289743 1:+11716168 None:intergenic
TTCTTCAGAATTTGGTGCTT+TGG 0.317391 1:-11718799 MsG0180000824.01.T01:intron
TAGTTGAACAGTTGCAGTTT+TGG 0.318320 1:-11715467 MsG0180000824.01.T01:three_prime_UTR
ATCTCCGTCTCCAACGGGTT+CGG 0.329867 1:+11722675 None:intergenic
TAATCTTTCTATCCATTTCA+TGG 0.330130 1:-11715542 MsG0180000824.01.T01:three_prime_UTR
AATAAAATCATTCACAATTA+CGG 0.339383 1:-11716225 MsG0180000824.01.T01:three_prime_UTR
ATTTGTGGATTTATTATGGT+TGG 0.343252 1:-11715594 MsG0180000824.01.T01:three_prime_UTR
GACAACCCTGAAGTTGATTC+TGG 0.347739 1:-11719092 MsG0180000824.01.T01:intron
TGGTGCTTTGGTGGAGAATT+CGG 0.352335 1:-11718787 MsG0180000824.01.T01:CDS
GGATAAGTTGCGGAACCTTT+CGG 0.354502 1:+11716393 None:intergenic
TAAGGTAGCGGGTAAGTATA+TGG 0.357340 1:-11722619 MsG0180000824.01.T01:CDS
TATCCATTGCGGGGATGGGG+TGG 0.359167 1:-11722704 None:intergenic
TTTGTGGATTTATTATGGTT+GGG 0.361911 1:-11715593 MsG0180000824.01.T01:three_prime_UTR
TCTCCGTCTCCAACGGGTTC+GGG 0.366909 1:+11722676 None:intergenic
GGAGGACCAGAATCAACTTC+AGG 0.378263 1:+11719086 None:intergenic
TCCATTGCGGGGATGGGGTG+GGG 0.384222 1:-11722702 None:intergenic
CGATGTCCTTGGAAAATTGC+TGG 0.396375 1:-11716107 MsG0180000824.01.T01:three_prime_UTR
CTTCCAACCTCAGGCATTTG+AGG 0.402300 1:+11715513 None:intergenic
ATCTCATCTCCGTCTCCAAC+GGG 0.402902 1:+11722670 None:intergenic
ACAAGATTTAAACAAAGTTA+TGG 0.405536 1:-11716919 MsG0180000824.01.T01:CDS
CAAATCCATAATTGAGGAAA+AGG 0.406650 1:+11716138 None:intergenic
GACTTAATCTTCTTAGTTTG+TGG 0.408159 1:+11716590 None:intergenic
TTCTTATCCCCATTGGATAT+GGG 0.411320 1:-11722642 MsG0180000824.01.T01:CDS
GAGAGAGGAGAGGGAGAGAG+AGG 0.413820 1:-11715679 MsG0180000824.01.T01:three_prime_UTR
CGCATCTGTTGCAGTGACCT+TGG 0.414522 1:-11716546 MsG0180000824.01.T01:three_prime_UTR
CATATTCCTGTGTGAGGTAA+AGG 0.424782 1:+11715810 None:intergenic
GCATCTGTTGCAGTGACCTT+GGG 0.426272 1:-11716545 MsG0180000824.01.T01:three_prime_UTR
GAAAGACCACTTTCATTTCA+AGG 0.428349 1:+11716190 None:intergenic
TTCAGAATTTGGTGCTTTGG+TGG 0.430345 1:-11718796 MsG0180000824.01.T01:intron
ACTTAATCTTCTTAGTTTGT+GGG 0.433689 1:+11716591 None:intergenic
GCTTCCACTTTCGGATTTCA+GGG 0.441836 1:-11715949 MsG0180000824.01.T01:three_prime_UTR
TTGCTTCGGCACGATGTCCT+TGG 0.442056 1:-11716118 MsG0180000824.01.T01:three_prime_UTR
GACCTTTGACTGCAGCCTGC+TGG 0.445088 1:+11716025 None:intergenic
CCTCAATTATGGATTTGCTT+CGG 0.447776 1:-11716132 MsG0180000824.01.T01:three_prime_UTR
ATTCGATTTCTTATCCCCAT+TGG 0.453054 1:-11722649 MsG0180000824.01.T01:CDS
TAGACCCCATGCATGACAAT+TGG 0.455729 1:+11716277 None:intergenic
AGTAATCGTGACTGCTGGTT+GGG 0.456343 1:-11716255 MsG0180000824.01.T01:three_prime_UTR
TGAAGTTTACTGTGAGATAA+TGG 0.457180 1:-11715628 MsG0180000824.01.T01:three_prime_UTR
ATCCATTGCGGGGATGGGGT+GGG 0.460041 1:-11722703 None:intergenic
TTGAGGGTCCTACCATGAAA+TGG 0.461904 1:+11715530 None:intergenic
CTACCTTACCCATATCCAAT+GGG 0.464290 1:+11722634 None:intergenic
GAAAGTGGTCTTTCCTAGAA+TGG 0.464886 1:-11716181 MsG0180000824.01.T01:three_prime_UTR
AGAATTCGGCATGCGATGAT+AGG 0.468358 1:-11718773 MsG0180000824.01.T01:CDS
AGGAATGATGGAGTGGAAGT+AGG 0.474995 1:-11718753 MsG0180000824.01.T01:CDS
TTCCAACCTCAGGCATTTGA+GGG 0.475560 1:+11715514 None:intergenic
GGGATTATTGGCTCCATGAC+AGG 0.482718 1:-11717459 MsG0180000824.01.T01:CDS
TACTTCCAATTGTCATGCAT+GGG 0.483434 1:-11716282 MsG0180000824.01.T01:three_prime_UTR
CTTTCTATCCATTTCATGGT+AGG 0.483978 1:-11715538 MsG0180000824.01.T01:three_prime_UTR
AGAGATTGTGTGAAAGAGAG+AGG 0.489175 1:-11715694 MsG0180000824.01.T01:three_prime_UTR
CATATATCAGTACATGGAAA+AGG 0.490002 1:-11715762 MsG0180000824.01.T01:three_prime_UTR
ACTGTGAGATAATGGTGGTG+GGG 0.492028 1:-11715620 MsG0180000824.01.T01:three_prime_UTR
ATCATCACCCTTCCAACCTC+AGG 0.495542 1:+11715504 None:intergenic
TGTGTGAAAGAGAGAGGAGA+GGG 0.495584 1:-11715688 MsG0180000824.01.T01:three_prime_UTR
AATCTCATCTCCGTCTCCAA+CGG 0.497018 1:+11722669 None:intergenic
GCTCCATGACAGGCAATTGT+CGG 0.502618 1:-11717449 MsG0180000824.01.T01:CDS
CTCAAATGCCTGAGGTTGGA+AGG 0.502744 1:-11715512 MsG0180000824.01.T01:three_prime_UTR
TACTGTGAGATAATGGTGGT+GGG 0.505840 1:-11715621 MsG0180000824.01.T01:three_prime_UTR
GAGATTCATTCAAGAGGAAG+TGG 0.507765 1:-11715652 MsG0180000824.01.T01:three_prime_UTR
GAGGTTGGAAGGGTGATGAT+TGG 0.507826 1:-11715501 MsG0180000824.01.T01:three_prime_UTR
ACTTTCATTTCAAGGAGTAC+AGG 0.509268 1:+11716198 None:intergenic
ATCGTGACTGCTGGTTGGGA+TGG 0.512730 1:-11716251 MsG0180000824.01.T01:three_prime_UTR
GAGGACCAGAATCAACTTCA+GGG 0.513061 1:+11719087 None:intergenic
TTGGATATGGGTAAGGTAGC+GGG 0.517989 1:-11722630 MsG0180000824.01.T01:CDS
CAAAGTCATATATCAGTACA+TGG 0.523365 1:-11715768 MsG0180000824.01.T01:three_prime_UTR
CTGTGAGATAATGGTGGTGG+GGG 0.524349 1:-11715619 MsG0180000824.01.T01:three_prime_UTR
AATTGGATGGCCTAAATAAG+AGG 0.531495 1:-11716486 MsG0180000824.01.T01:three_prime_UTR
GACCCTCAAATGCCTGAGGT+TGG 0.534183 1:-11715516 MsG0180000824.01.T01:three_prime_UTR
GCATGCGATGATAGGAATGA+TGG 0.537703 1:-11718765 MsG0180000824.01.T01:CDS
TGGTTAAGTGTTGATTGTCT+TGG 0.539097 1:-11715849 MsG0180000824.01.T01:three_prime_UTR
TAGTAATCGTGACTGCTGGT+TGG 0.539202 1:-11716256 MsG0180000824.01.T01:three_prime_UTR
ATCCCCATTGGATATGGGTA+AGG 0.539863 1:-11722637 MsG0180000824.01.T01:CDS
AATCCCCTGAAATCCGAAAG+TGG 0.541990 1:+11715945 None:intergenic
TGTACTCCTTGAAATGAAAG+TGG 0.544011 1:-11716196 MsG0180000824.01.T01:three_prime_UTR
TTGGAAGGGTGATGATTGGA+TGG 0.544986 1:-11715497 MsG0180000824.01.T01:three_prime_UTR
TCAACTTCGACAGCATCAAA+AGG 0.547195 1:-11716051 MsG0180000824.01.T01:three_prime_UTR
TCACAAGTCAGAATCATTGA+AGG 0.548563 1:-11716882 MsG0180000824.01.T01:CDS
AAACCGACAATTGCCTGTCA+TGG 0.552139 1:+11717446 None:intergenic
TACCAGCAGGCTGCAGTCAA+AGG 0.552521 1:-11716027 MsG0180000824.01.T01:three_prime_UTR
GCTACCTTACCCATATCCAA+TGG 0.553639 1:+11722633 None:intergenic
GTACTTCCAATTGTCATGCA+TGG 0.556893 1:-11716283 MsG0180000824.01.T01:three_prime_UTR
TCGTGACTGCTGGTTGGGAT+GGG 0.557894 1:-11716250 MsG0180000824.01.T01:three_prime_UTR
TTACTCTTAGGGCTTGAAGT+AGG 0.562824 1:+11716358 None:intergenic
AGCGGGTAAGTATATGGTAG+CGG 0.566421 1:-11722613 MsG0180000824.01.T01:CDS
TGTGGAATGTTAGTGACGAC+GGG 0.568024 1:-11716622 MsG0180000824.01.T01:three_prime_UTR
TTGTGTGAAAGAGAGAGGAG+AGG 0.568753 1:-11715689 MsG0180000824.01.T01:three_prime_UTR
GCGGGTAAGTATATGGTAGC+GGG 0.571722 1:-11722612 MsG0180000824.01.T01:intron
CTGTTGCAGTGACCTTGGGG+TGG 0.571926 1:-11716541 MsG0180000824.01.T01:three_prime_UTR
TTACTGTGAGATAATGGTGG+TGG 0.572401 1:-11715622 MsG0180000824.01.T01:three_prime_UTR
CTTCTTAGTTTGTGGGAGCG+AGG 0.572986 1:+11716598 None:intergenic
ACTTATCAGTTCATGACAAG+TGG 0.577251 1:-11715916 MsG0180000824.01.T01:three_prime_UTR
AGCATCAAAAGGATACCAGC+AGG 0.577585 1:-11716040 MsG0180000824.01.T01:three_prime_UTR
TATTTGGATTCTATTCCGAA+AGG 0.577615 1:-11716408 MsG0180000824.01.T01:three_prime_UTR
CTGTGGAATGTTAGTGACGA+CGG 0.578440 1:-11716623 MsG0180000824.01.T01:three_prime_UTR
ATTGGATATGGGTAAGGTAG+CGG 0.578576 1:-11722631 MsG0180000824.01.T01:CDS
CTTCCACTTTCGGATTTCAG+GGG 0.578833 1:-11715948 MsG0180000824.01.T01:three_prime_UTR
GGAAAAGAGATTCATTCAAG+AGG 0.583390 1:-11715658 MsG0180000824.01.T01:three_prime_UTR
CTTACAAAAGCATATCTGAT+GGG 0.584862 1:+11715738 None:intergenic
CCGAAGCAAATCCATAATTG+AGG 0.584931 1:+11716132 None:intergenic
GTGTCAATCTCAGATGCAAA+TGG 0.586470 1:-11719122 MsG0180000824.01.T01:CDS
ATACCCGAACCCGTTGGAGA+CGG 0.589448 1:-11722679 MsG0180000824.01.T01:CDS
AATATGCTGGCCCTTAAAAG+AGG 0.589814 1:-11715793 MsG0180000824.01.T01:three_prime_UTR
TACCTCACACAGGAATATGC+TGG 0.589840 1:-11715806 MsG0180000824.01.T01:three_prime_UTR
GTGGGGATACCCGAACCCGT+TGG 0.590177 1:-11722685 MsG0180000824.01.T01:CDS
CACAAGTCAGAATCATTGAA+GGG 0.591839 1:-11716881 MsG0180000824.01.T01:CDS
GTTTCTCCTCGGATAAGTTG+CGG 0.600952 1:+11716383 None:intergenic
GGATCAAGGCATACAGCTTG+AGG 0.601512 1:+11716460 None:intergenic
TCTTACAAAAGCATATCTGA+TGG 0.602893 1:+11715737 None:intergenic
TCTGACTTGTGAATCAGCAC+AGG 0.603387 1:+11716893 None:intergenic
GGTCTAGTAATCGTGACTGC+TGG 0.608692 1:-11716260 MsG0180000824.01.T01:three_prime_UTR
TCAAATGCCTGAGGTTGGAA+GGG 0.610065 1:-11715511 MsG0180000824.01.T01:three_prime_UTR
AAAACTGCAACTGTTCAACT+AGG 0.617753 1:+11715469 None:intergenic
TGAATCTGTGAACGCTGCTG+AGG 0.618609 1:-11718706 MsG0180000824.01.T01:intron
TGAAGTAGGAAGTTTCTCCT+CGG 0.626850 1:+11716372 None:intergenic
TCAGATTTCAAACCACCCCA+AGG 0.637730 1:+11716529 None:intergenic
CCATCCGAGTATAAAAGATG+CGG 0.638649 1:+11716690 None:intergenic
GGCCAGCATATTCCTGTGTG+AGG 0.643577 1:+11715804 None:intergenic
TTACAAAAGCATATCTGATG+GGG 0.644230 1:+11715739 None:intergenic
CAGTGGATACATTAGAACCA+CGG 0.653293 1:+11715885 None:intergenic
TGTGAGATAATGGTGGTGGG+GGG 0.656493 1:-11715618 MsG0180000824.01.T01:three_prime_UTR
GACAAGTGGCTTCACGACCG+TGG 0.657340 1:-11715902 MsG0180000824.01.T01:three_prime_UTR
CGATGATAGGAATGATGGAG+TGG 0.665089 1:-11718760 MsG0180000824.01.T01:CDS
AAATTGCCTTTACCTCACAC+AGG 0.665763 1:-11715816 MsG0180000824.01.T01:three_prime_UTR
CATCTGTTGCAGTGACCTTG+GGG 0.673836 1:-11716544 MsG0180000824.01.T01:three_prime_UTR
ACTTCCAATTGTCATGCATG+GGG 0.679789 1:-11716281 MsG0180000824.01.T01:three_prime_UTR
AAGGTTCCGCAACTTATCCG+AGG 0.687317 1:-11716389 MsG0180000824.01.T01:three_prime_UTR
GTAGGACCCTCAAATGCCTG+AGG 0.688180 1:-11715520 MsG0180000824.01.T01:three_prime_UTR
AGAAGATTAAGTCTTGCGAG+CGG 0.716766 1:-11716580 MsG0180000824.01.T01:three_prime_UTR
TACCTTACCCATATCCAATG+GGG 0.730857 1:+11722635 None:intergenic
AGTTTACTGTGAGATAATGG+TGG 0.737369 1:-11715625 MsG0180000824.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTATTATTATTATTAT+TGG - Chr1:11716744-11716763 MsG0180000824.01.T01:intron 0.0%
!! ATAAAATTAAAATTGCAATA+GGG + Chr1:11717062-11717081 None:intergenic 10.0%
!! TAAAATCAATTAATTAACTA+CGG + Chr1:11721185-11721204 None:intergenic 10.0%
!! TATAAAATTAAAATTGCAAT+AGG + Chr1:11717063-11717082 None:intergenic 10.0%
!! TGTTATTAAATATTATAAAG+TGG + Chr1:11715824-11715843 None:intergenic 10.0%
!!! AAAACATTATAATTTTGTTA+CGG - Chr1:11718214-11718233 MsG0180000824.01.T01:intron 10.0%
!!! AAATTTAAAATGTATAAGAT+TGG + Chr1:11717089-11717108 None:intergenic 10.0%
!!! CTTTTATTAAAAAAAAAAAG+TGG + Chr1:11716351-11716370 None:intergenic 10.0%
!!! TTCTTTTAATGAAATTTTTA+TGG + Chr1:11716962-11716981 None:intergenic 10.0%
!!! TTTTTTCAATAACAATAATA+GGG + Chr1:11717871-11717890 None:intergenic 10.0%
!!! TTTTTTCTAACAAAAATTTA+AGG - Chr1:11716530-11716549 MsG0180000824.01.T01:three_prime_UTR 10.0%
!! AAAATACTATAGTTTAGATT+GGG + Chr1:11717986-11718005 None:intergenic 15.0%
!! AACTTTAGTTAATGTATATT+AGG - Chr1:11716440-11716459 MsG0180000824.01.T01:three_prime_UTR 15.0%
!! AATAAAATCATTCACAATTA+CGG - Chr1:11721916-11721935 MsG0180000824.01.T01:intron 15.0%
!! AATAGAATCCAAATAAAAAT+TGG + Chr1:11721728-11721747 None:intergenic 15.0%
!! ATTATTTAGAAGATACAATT+AGG + Chr1:11715593-11715612 None:intergenic 15.0%
!! CAAATATAGTAATATATGTA+TGG + Chr1:11717567-11717586 None:intergenic 15.0%
!! CGTTAAATAAAATGTTAAAA+AGG - Chr1:11717753-11717772 MsG0180000824.01.T01:intron 15.0%
!! CTAAAATTTCATAGTAAAAA+TGG + Chr1:11719745-11719764 None:intergenic 15.0%
!! TAAAATTAAAATTGCAATAG+GGG + Chr1:11717061-11717080 None:intergenic 15.0%
!! TCAATGATATATAAAAATCA+CGG - Chr1:11715729-11715748 MsG0180000824.01.T01:three_prime_UTR 15.0%
!! TTTCAAAATTCTATGAAAAT+TGG - Chr1:11720152-11720171 MsG0180000824.01.T01:intron 15.0%
!!! AAGTTCTTTACATTTTTTTA+AGG - Chr1:11716155-11716174 MsG0180000824.01.T01:three_prime_UTR 15.0%
!!! AGAGAAATTTTTTAAAATGT+TGG + Chr1:11718033-11718052 None:intergenic 15.0%
!!! AGTCTACTAATATTTTTAAA+GGG + Chr1:11716599-11716618 None:intergenic 15.0%
!!! ATGATTTTGTGATAAAAAAT+TGG - Chr1:11718683-11718702 MsG0180000824.01.T01:intron 15.0%
!!! ATGTAAAGAACTTTTTTTTT+AGG + Chr1:11716148-11716167 None:intergenic 15.0%
!!! ATTTTAACGAAAATTCAAAA+GGG + Chr1:11718559-11718578 None:intergenic 15.0%
!!! CATTGAAAATTCTAAAAAAT+TGG - Chr1:11721638-11721657 MsG0180000824.01.T01:intron 15.0%
!!! GTTTTTTCAATAACAATAAT+AGG + Chr1:11717872-11717891 None:intergenic 15.0%
!!! TAACAAAAATTTAAGGTAAA+GGG - Chr1:11716537-11716556 MsG0180000824.01.T01:three_prime_UTR 15.0%
!!! TATTTTAACGAAAATTCAAA+AGG + Chr1:11718560-11718579 None:intergenic 15.0%
!!! TGATTTTGTGATAAAAAATT+GGG - Chr1:11718684-11718703 MsG0180000824.01.T01:intron 15.0%
!!! TGTAAAGAACTTTTTTTTTA+GGG + Chr1:11716147-11716166 None:intergenic 15.0%
!!! TTTTTTTTAACAAGCAAAAA+TGG + Chr1:11716298-11716317 None:intergenic 15.0%
!! AAAAGTCAAATTAGATAGAT+AGG + Chr1:11721363-11721382 None:intergenic 20.0%
!! AAAGTGGTAATAAAGTAAAT+AGG + Chr1:11716335-11716354 None:intergenic 20.0%
!! AAATACTATAGTTTAGATTG+GGG + Chr1:11717985-11718004 None:intergenic 20.0%
!! AATGATATATAAAAATCACG+GGG - Chr1:11715731-11715750 MsG0180000824.01.T01:three_prime_UTR 20.0%
!! ACAAGATTTAAACAAAGTTA+TGG - Chr1:11721222-11721241 MsG0180000824.01.T01:intron 20.0%
!! ATAAATCACAATAATGATAG+CGG + Chr1:11715770-11715789 None:intergenic 20.0%
!! CAAAATACTATAGTTTAGAT+TGG + Chr1:11717987-11718006 None:intergenic 20.0%
!! CAATGATATATAAAAATCAC+GGG - Chr1:11715730-11715749 MsG0180000824.01.T01:three_prime_UTR 20.0%
!! GTAATGAATGAAATCTATAT+TGG + Chr1:11717726-11717745 None:intergenic 20.0%
!! TAATTTCTTTACATTTCCTT+CGG - Chr1:11720599-11720618 MsG0180000824.01.T01:intron 20.0%
!! TAGATTTCATTCATTACATA+TGG - Chr1:11717729-11717748 MsG0180000824.01.T01:intron 20.0%
!! TAGTTATTAATGTAATGAGA+CGG - Chr1:11717108-11717127 MsG0180000824.01.T01:intron 20.0%
!! TATGAAAATTGGAATTGATT+TGG - Chr1:11720163-11720182 MsG0180000824.01.T01:intron 20.0%
!! TGTATCTTCTAAATAATAGT+GGG - Chr1:11715596-11715615 MsG0180000824.01.T01:three_prime_UTR 20.0%
!! TTGTATCTTCTAAATAATAG+TGG - Chr1:11715595-11715614 MsG0180000824.01.T01:three_prime_UTR 20.0%
!! TTTCGTTAAAATATCTTGAT+GGG - Chr1:11718567-11718586 MsG0180000824.01.T01:intron 20.0%
!!! AAATTTGTTTTGTGAAAAGA+GGG - Chr1:11720956-11720975 MsG0180000824.01.T01:intron 20.0%
!!! AATATTTTTAAAGGGATACA+AGG + Chr1:11716591-11716610 None:intergenic 20.0%
!!! ATATTTTTAAAGGGATACAA+GGG + Chr1:11716590-11716609 None:intergenic 20.0%
!!! CGGAACATATTTTATTAATT+TGG - Chr1:11717128-11717147 MsG0180000824.01.T01:intron 20.0%
!!! CTAACAAAAATTTAAGGTAA+AGG - Chr1:11716536-11716555 MsG0180000824.01.T01:three_prime_UTR 20.0%
!!! GAAAATTCTAAAAAATTGGA+TGG - Chr1:11721642-11721661 MsG0180000824.01.T01:intron 20.0%
!!! GAGTCTACTAATATTTTTAA+AGG + Chr1:11716600-11716619 None:intergenic 20.0%
!!! TCAATTTTCTCAAACTATAT+CGG - Chr1:11720862-11720881 MsG0180000824.01.T01:intron 20.0%
!!! TGATATTTCATTTTCATTAG+CGG - Chr1:11720457-11720476 MsG0180000824.01.T01:intron 20.0%
!!! TTACTATCGTTTTTTTATGA+AGG - Chr1:11718184-11718203 MsG0180000824.01.T01:intron 20.0%
!!! TTTACTATGAAATTTTAGTC+CGG - Chr1:11719747-11719766 MsG0180000824.01.T01:intron 20.0%
!!! TTTTCGTTAAAATATCTTGA+TGG - Chr1:11718566-11718585 MsG0180000824.01.T01:intron 20.0%
! AAATGAAAATTGTACTTCGT+TGG + Chr1:11718507-11718526 None:intergenic 25.0%
! AACACATTGAAATTGTTGAA+CGG + Chr1:11716095-11716114 None:intergenic 25.0%
! AATACATAAGAAGAACAGAA+AGG + Chr1:11720324-11720343 None:intergenic 25.0%
! AATGTCGTTGAAAAATTCAA+AGG - Chr1:11721286-11721305 MsG0180000824.01.T01:intron 25.0%
! ATGAGATTAATAGAATGAAG+AGG - Chr1:11719235-11719254 MsG0180000824.01.T01:intron 25.0%
! ATTTGTGGATTTATTATGGT+TGG - Chr1:11722547-11722566 MsG0180000824.01.T01:intron 25.0%
! CTCAAAAAATTGTATATCTG+TGG - Chr1:11721501-11721520 MsG0180000824.01.T01:intron 25.0%
! CTTACATAGATGTTGATATT+TGG + Chr1:11718430-11718449 None:intergenic 25.0%
! CTTGTTTGAAGGTTATTTAA+TGG - Chr1:11718926-11718945 MsG0180000824.01.T01:intron 25.0%
! GAAGAGGAAAAAAAAAACAT+GGG + Chr1:11718455-11718474 None:intergenic 25.0%
! GATCTTACTCTTTATAAAAG+TGG + Chr1:11716386-11716405 None:intergenic 25.0%
! TAAATCACAATAATGATAGC+GGG + Chr1:11715769-11715788 None:intergenic 25.0%
! TAATCTTTCTATCCATTTCA+TGG - Chr1:11722599-11722618 MsG0180000824.01.T01:intron 25.0%
! TATATTAGGAAAACAACACA+TGG - Chr1:11716454-11716473 MsG0180000824.01.T01:three_prime_UTR 25.0%
! TGAACCAAAACTTATAAAGT+GGG + Chr1:11721326-11721345 None:intergenic 25.0%
! TGAAGAGGAAAAAAAAAACA+TGG + Chr1:11718456-11718475 None:intergenic 25.0%
! TGAGCTTAAAATTGTGTTAA+TGG - Chr1:11717151-11717170 MsG0180000824.01.T01:intron 25.0%
! TGTTTGACTAAAGAAAAGTA+AGG + Chr1:11716488-11716507 None:intergenic 25.0%
! TTATCCTTATCCATAAACAA+GGG + Chr1:11719917-11719936 None:intergenic 25.0%
! TTCAAAAAGCAATACTTTCA+AGG - Chr1:11717793-11717812 MsG0180000824.01.T01:intron 25.0%
! TTGAACCAAAACTTATAAAG+TGG + Chr1:11721327-11721346 None:intergenic 25.0%
! TTTATCCTTATCCATAAACA+AGG + Chr1:11719918-11719937 None:intergenic 25.0%
! TTTGTGGATTTATTATGGTT+GGG - Chr1:11722548-11722567 MsG0180000824.01.T01:intron 25.0%
! TTTGTGTCTGTATATAGTTT+GGG - Chr1:11718854-11718873 MsG0180000824.01.T01:intron 25.0%
!! AAAAAATGTTGCTTGTTTGA+AGG - Chr1:11718915-11718934 MsG0180000824.01.T01:intron 25.0%
!! CTTTACACTTTATCCTATTT+TGG - Chr1:11716218-11716237 MsG0180000824.01.T01:three_prime_UTR 25.0%
!! GTTTAACCTTTAAAAGACAA+TGG + Chr1:11717039-11717058 None:intergenic 25.0%
!! TCTCTAAGCCAATTTTTATT+TGG - Chr1:11721717-11721736 MsG0180000824.01.T01:intron 25.0%
!! TTTCTTCCATTGTCTTTTAA+AGG - Chr1:11717030-11717049 MsG0180000824.01.T01:intron 25.0%
!!! ACTTAATCTTCTTAGTTTGT+GGG + Chr1:11721553-11721572 None:intergenic 25.0%
!!! AGTGAAGATTTTTTACTCTT+AGG + Chr1:11721798-11721817 None:intergenic 25.0%
!!! CAAATTTGTTTTGTGAAAAG+AGG - Chr1:11720955-11720974 MsG0180000824.01.T01:intron 25.0%
!!! CATTTCATGTTTTAAGTCTA+AGG - Chr1:11721387-11721406 MsG0180000824.01.T01:intron 25.0%
!!! CATTTTAAGGTTTATTGAAG+AGG + Chr1:11718471-11718490 None:intergenic 25.0%
!!! GGTTTGTTTTGTTTTGTTTT+TGG - Chr1:11720993-11721012 MsG0180000824.01.T01:intron 25.0%
!!! GTGAAGATTTTTTACTCTTA+GGG + Chr1:11721797-11721816 None:intergenic 25.0%
!!! TTTAGCTTTACTTCTTGTTT+TGG - Chr1:11720350-11720369 MsG0180000824.01.T01:intron 25.0%
AATGAAATATCATCATCCAC+AGG + Chr1:11720449-11720468 None:intergenic 30.0%
AATGGAATATAGATTACCAC+CGG + Chr1:11716280-11716299 None:intergenic 30.0%
AGAAAAACAATACTGAAAGC+CGG + Chr1:11721096-11721115 None:intergenic 30.0%
AGATTAATAGAATGAAGAGG+TGG - Chr1:11719238-11719257 MsG0180000824.01.T01:intron 30.0%
AGGATAAGTTTATAAGTGGA+TGG - Chr1:11719150-11719169 MsG0180000824.01.T01:CDS 30.0%
AGGATTTCTATATTGTTGTC+AGG - Chr1:11721407-11721426 MsG0180000824.01.T01:intron 30.0%
ATGAGTCTATTATCCATTCT+AGG + Chr1:11721976-11721995 None:intergenic 30.0%
CAAAAGATGATCACCAAAAT+AGG + Chr1:11716234-11716253 None:intergenic 30.0%
CAAAGTCATATATCAGTACA+TGG - Chr1:11722373-11722392 MsG0180000824.01.T01:intron 30.0%
CAAATCCATAATTGAGGAAA+AGG + Chr1:11722006-11722025 None:intergenic 30.0%
CAGACAAAGAGATTCTAAAT+TGG + Chr1:11722578-11722597 None:intergenic 30.0%
CATATATCAGTACATGGAAA+AGG - Chr1:11722379-11722398 MsG0180000824.01.T01:intron 30.0%
CATTCACGTAAAGTAAATAC+AGG + Chr1:11719879-11719898 None:intergenic 30.0%
CTTGGTAAAAAGAAATCTTC+TGG - Chr1:11721059-11721078 MsG0180000824.01.T01:intron 30.0%
GAAAAGACAACAGAACTTAA+TGG + Chr1:11721141-11721160 None:intergenic 30.0%
GAACTTTCAGCTCTTTATAT+GGG - Chr1:11719694-11719713 MsG0180000824.01.T01:intron 30.0%
GAATTTGTGTTTACCTTTAC+AGG - Chr1:11720657-11720676 MsG0180000824.01.T01:intron 30.0%
GACACATAAATCACGATTTA+AGG - Chr1:11715932-11715951 MsG0180000824.01.T01:three_prime_UTR 30.0%
GATCTTTAATCAAGAGATCT+CGG + Chr1:11716627-11716646 None:intergenic 30.0%
GGAAGAAATGAAGATTCTAT+GGG - Chr1:11720620-11720639 MsG0180000824.01.T01:intron 30.0%
GGAATGTAAAGAAAGTGAAA+AGG + Chr1:11716126-11716145 None:intergenic 30.0%
GGGTATTTGTGGATTTATTA+TGG - Chr1:11722543-11722562 MsG0180000824.01.T01:intron 30.0%
GTTTGTGTCTGTATATAGTT+TGG - Chr1:11718853-11718872 MsG0180000824.01.T01:intron 30.0%
TAACCACTATATCGAAACTT+TGG - Chr1:11716655-11716674 MsG0180000824.01.T01:three_prime_UTR 30.0%
TAATTTCACAAACTTAGTGC+AGG + Chr1:11716835-11716854 None:intergenic 30.0%
TATTTGGATTCTATTCCGAA+AGG - Chr1:11721733-11721752 MsG0180000824.01.T01:intron 30.0%
TCAGAAAAACCTTGAGAATT+CGG - Chr1:11719185-11719204 MsG0180000824.01.T01:intron 30.0%
TCATTGTTCTTTGTAAGACT+TGG - Chr1:11718709-11718728 MsG0180000824.01.T01:CDS 30.0%
TCCATGAATTCTTCAGAATT+TGG - Chr1:11719334-11719353 MsG0180000824.01.T01:intron 30.0%
TGAAGTTTACTGTGAGATAA+TGG - Chr1:11722513-11722532 MsG0180000824.01.T01:intron 30.0%
TGACTTATCTTACTCTTTGT+AGG + Chr1:11717662-11717681 None:intergenic 30.0%
TTAGAAGATACAATTAGGCA+TGG + Chr1:11715588-11715607 None:intergenic 30.0%
TTGTGTCTGTATATAGTTTG+GGG - Chr1:11718855-11718874 MsG0180000824.01.T01:intron 30.0%
! AAAAAGAAATCTTCTGGAAG+AGG - Chr1:11721065-11721084 MsG0180000824.01.T01:intron 30.0%
! AAAGAGGGATAATAACTTGT+TGG - Chr1:11720971-11720990 MsG0180000824.01.T01:intron 30.0%
! AAATCACAATAATGATAGCG+GGG + Chr1:11715768-11715787 None:intergenic 30.0%
! ACCAAATTCTGAAGAATTCA+TGG + Chr1:11719338-11719357 None:intergenic 30.0%
! CTTACAAAAGCATATCTGAT+GGG + Chr1:11722406-11722425 None:intergenic 30.0%
! GACTTAATCTTCTTAGTTTG+TGG + Chr1:11721554-11721573 None:intergenic 30.0%
! GAGATTTTGGATATGAATTG+TGG - Chr1:11719097-11719116 MsG0180000824.01.T01:CDS 30.0%
! TCTTACAAAAGCATATCTGA+TGG + Chr1:11722407-11722426 None:intergenic 30.0%
! TTACAAAAGCATATCTGATG+GGG + Chr1:11722405-11722424 None:intergenic 30.0%
!! AAAGAGGGTTGATAAAAAGT+TGG - Chr1:11719536-11719555 MsG0180000824.01.T01:intron 30.0%
!! AAGAGGGATAATAACTTGTT+GGG - Chr1:11720972-11720991 MsG0180000824.01.T01:intron 30.0%
!! AATTTGAAGCATTGCTAAAC+TGG + Chr1:11720941-11720960 None:intergenic 30.0%
!!! ACAATTTTTTGAGTCTTCAC+AGG + Chr1:11721494-11721513 None:intergenic 30.0%
!!! ATTTTTTCATCAGTAGAGTC+TGG + Chr1:11717217-11717236 None:intergenic 30.0%
!!! CAACATTTTTTCAAGCTAGT+GGG + Chr1:11718906-11718925 None:intergenic 30.0%
AAAACTGCAACTGTTCAACT+AGG + Chr1:11722675-11722694 None:intergenic 35.0%
AACACAGAGAAGAAACACAA+TGG + Chr1:11718300-11718319 None:intergenic 35.0%
AAGATTGTGTCTTGAAAGTG+AGG + Chr1:11718391-11718410 None:intergenic 35.0%
AATTGGATGGCCTAAATAAG+AGG - Chr1:11721655-11721674 MsG0180000824.01.T01:intron 35.0%
ACATAAGAAGAACAGAAAGG+CGG + Chr1:11720321-11720340 None:intergenic 35.0%
ACTCCAAAGTTTCGATATAG+TGG + Chr1:11716661-11716680 None:intergenic 35.0%
ACTTATCAGTTCATGACAAG+TGG - Chr1:11722225-11722244 MsG0180000824.01.T01:intron 35.0%
AGAAATTATACCTGTCCATC+AGG + Chr1:11720587-11720606 None:intergenic 35.0%
AGAATCTTCATTTCTTCCGA+AGG + Chr1:11720618-11720637 None:intergenic 35.0%
AGCCAGGAAATATGAATAGT+GGG + Chr1:11717448-11717467 None:intergenic 35.0%
AGGCGAAGAAAATGTAATTG+CGG + Chr1:11717367-11717386 None:intergenic 35.0%
AGGGATATTATTTGCGTTCA+AGG - Chr1:11716556-11716575 MsG0180000824.01.T01:three_prime_UTR 35.0%
ATACAATTAGGCATGGCAAT+GGG + Chr1:11715581-11715600 None:intergenic 35.0%
ATACAGGATGTATCAACTTC+TGG + Chr1:11719863-11719882 None:intergenic 35.0%
ATGCATACAATTCAATCCTG+TGG - Chr1:11720430-11720449 MsG0180000824.01.T01:intron 35.0%
ATTCGATTTCTTATCCCCAT+TGG - Chr1:11715492-11715511 MsG0180000824.01.T01:three_prime_UTR 35.0%
CAATCAACAACATGACAATC+AGG + Chr1:11720516-11720535 None:intergenic 35.0%
CAATCACAACTATGCTTACT+TGG - Chr1:11721041-11721060 MsG0180000824.01.T01:intron 35.0%
CACAAGTCAGAATCATTGAA+GGG - Chr1:11721260-11721279 MsG0180000824.01.T01:intron 35.0%
CATTGAAATTGTTGAACGGA+TGG + Chr1:11716091-11716110 None:intergenic 35.0%
CGGAAGAAATGAAGATTCTA+TGG - Chr1:11720619-11720638 MsG0180000824.01.T01:intron 35.0%
CTGATTGTCATGTTGTTGAT+TGG - Chr1:11720514-11720533 MsG0180000824.01.T01:intron 35.0%
CTTAGAGAAAAAGAAGATGG+TGG + Chr1:11721705-11721724 None:intergenic 35.0%
CTTGCTAAAGTAAGAACTCA+AGG + Chr1:11717387-11717406 None:intergenic 35.0%
CTTTCTATCCATTTCATGGT+AGG - Chr1:11722603-11722622 MsG0180000824.01.T01:intron 35.0%
GAAAAAAGATGCTTCGATCT+TGG + Chr1:11721163-11721182 None:intergenic 35.0%
GAAAGACCACTTTCATTTCA+AGG + Chr1:11721954-11721973 None:intergenic 35.0%
GAAGAAACTATAAGTGAGTG+AGG + Chr1:11717017-11717036 None:intergenic 35.0%
GAGATGTTCTCAATCTTTCA+TGG - Chr1:11718343-11718362 MsG0180000824.01.T01:intron 35.0%
GATGAAAAAATGTTGTGCAC+CGG - Chr1:11717226-11717245 MsG0180000824.01.T01:intron 35.0%
GCGTAGGATAAGTTTATAAG+TGG - Chr1:11719146-11719165 MsG0180000824.01.T01:CDS 35.0%
GGAAAAGAGATTCATTCAAG+AGG - Chr1:11722483-11722502 MsG0180000824.01.T01:intron 35.0%
GGAACTTTCAGCTCTTTATA+TGG - Chr1:11719693-11719712 MsG0180000824.01.T01:intron 35.0%
TACTTCCAATTGTCATGCAT+GGG - Chr1:11721859-11721878 MsG0180000824.01.T01:intron 35.0%
TATTCCACTCACATAGAACA+CGG - Chr1:11716895-11716914 MsG0180000824.01.T01:CDS 35.0%
TCACAAGTCAGAATCATTGA+AGG - Chr1:11721259-11721278 MsG0180000824.01.T01:intron 35.0%
TCCACTGAAAAATGAAGAAG+TGG - Chr1:11722272-11722291 MsG0180000824.01.T01:intron 35.0%
TGAATCGAAGTAAACAACCA+CGG + Chr1:11717309-11717328 None:intergenic 35.0%
TGGCTTAGAGAAAAAGAAGA+TGG + Chr1:11721708-11721727 None:intergenic 35.0%
TGTACTCCTTGAAATGAAAG+TGG - Chr1:11721945-11721964 MsG0180000824.01.T01:intron 35.0%
TGTGTCTGTATATAGTTTGG+GGG - Chr1:11718856-11718875 MsG0180000824.01.T01:intron 35.0%
TGTGTTTACCTTTACAGGTA+GGG - Chr1:11720662-11720681 MsG0180000824.01.T01:intron 35.0%
TTAGTTACCATGCATGAGTT+TGG - Chr1:11719474-11719493 MsG0180000824.01.T01:intron 35.0%
TTCTTATCCCCATTGGATAT+GGG - Chr1:11715499-11715518 MsG0180000824.01.T01:three_prime_UTR 35.0%
TTGTGTTTACCTTTACAGGT+AGG - Chr1:11720661-11720680 MsG0180000824.01.T01:intron 35.0%
TTTATCTGCATATGTAGCAC+CGG - Chr1:11720767-11720786 MsG0180000824.01.T01:intron 35.0%
TTTCTTATCCCCATTGGATA+TGG - Chr1:11715498-11715517 MsG0180000824.01.T01:three_prime_UTR 35.0%
! ACTTTCATTTCAAGGAGTAC+AGG + Chr1:11721946-11721965 None:intergenic 35.0%
! AGTGTCCTTTTCCTCAATTA+TGG - Chr1:11721998-11722017 MsG0180000824.01.T01:intron 35.0%
! AGTTTACTGTGAGATAATGG+TGG - Chr1:11722516-11722535 MsG0180000824.01.T01:intron 35.0%
! ATAGATGAAAAGTGCGCATA+TGG - Chr1:11720484-11720503 MsG0180000824.01.T01:intron 35.0%
! ATCCTTTTCGTGTTACAAAC+TGG - Chr1:11718604-11718623 MsG0180000824.01.T01:intron 35.0%
! ATGACTTTGCACCTCTTTTA+AGG + Chr1:11722362-11722381 None:intergenic 35.0%
! ATGGTTGAATAGAAGCACAA+TGG - Chr1:11718945-11718964 MsG0180000824.01.T01:intron 35.0%
! ATGTCCGCATCTTTTATACT+CGG - Chr1:11721447-11721466 MsG0180000824.01.T01:intron 35.0%
! CCTCAATTATGGATTTGCTT+CGG - Chr1:11722009-11722028 MsG0180000824.01.T01:intron 35.0%
! CTTCTTTGTTTCTTGCATGA+CGG + Chr1:11719674-11719693 None:intergenic 35.0%
! CTTTGTAAGACTTGGTTCAA+TGG - Chr1:11718717-11718736 MsG0180000824.01.T01:CDS 35.0%
! GTGAAATTTTGGATCTCTCT+TGG - Chr1:11720057-11720076 MsG0180000824.01.T01:intron 35.0%
! GTTTTCTCACACAGTAACTA+TGG - Chr1:11720286-11720305 MsG0180000824.01.T01:intron 35.0%
! TAGATGAAAAGTGCGCATAT+GGG - Chr1:11720485-11720504 MsG0180000824.01.T01:intron 35.0%
! TAGTTGAACAGTTGCAGTTT+TGG - Chr1:11722674-11722693 MsG0180000824.01.T01:CDS 35.0%
! TCCTTTTCGTGTTACAAACT+GGG - Chr1:11718605-11718624 MsG0180000824.01.T01:intron 35.0%
! TGACTTTGCACCTCTTTTAA+GGG + Chr1:11722361-11722380 None:intergenic 35.0%
! TGCATCATTTTCCTCTCATA+AGG - Chr1:11719987-11720006 MsG0180000824.01.T01:intron 35.0%
! TGCTTTTGTAAGACTCTTGT+TGG - Chr1:11722414-11722433 MsG0180000824.01.T01:intron 35.0%
! TTTTGATCAGTCAGTGGTTT+CGG - Chr1:11719411-11719430 MsG0180000824.01.T01:intron 35.0%
!! AAAAAGAAGATGGTGGATCA+AGG + Chr1:11721698-11721717 None:intergenic 35.0%
!! AAACTATATCGGTGTCAACA+TGG - Chr1:11720873-11720892 MsG0180000824.01.T01:intron 35.0%
!! ACCACTTCTTCATTTTTCAG+TGG + Chr1:11722276-11722295 None:intergenic 35.0%
!! ATAAGTGGATGGATTGAGTT+TGG - Chr1:11719161-11719180 MsG0180000824.01.T01:CDS 35.0%
!! CGAATCTGATGTCTTTTTCA+GGG + Chr1:11719957-11719976 None:intergenic 35.0%
!! CTATGAAATTTTAGTCCGGA+CGG - Chr1:11719751-11719770 MsG0180000824.01.T01:intron 35.0%
!! GAGCAAAAGTCATGGTTTTA+TGG - Chr1:11719270-11719289 MsG0180000824.01.T01:intron 35.0%
!! TGGTTAAGTGTTGATTGTCT+TGG - Chr1:11722292-11722311 MsG0180000824.01.T01:intron 35.0%
!! TTCTTCAGAATTTGGTGCTT+TGG - Chr1:11719342-11719361 MsG0180000824.01.T01:intron 35.0%
!!! CAAAAGTCATGGTTTTATGG+AGG - Chr1:11719273-11719292 MsG0180000824.01.T01:intron 35.0%
!!! CGAAACTGCAGTCTTTTTTA+AGG + Chr1:11722145-11722164 None:intergenic 35.0%
!!! GCAACATTTTTTCAAGCTAG+TGG + Chr1:11718907-11718926 None:intergenic 35.0%
!!! GCTCTCGATTTTTTGTTTCT+CGG - Chr1:11716055-11716074 MsG0180000824.01.T01:three_prime_UTR 35.0%
!!! GGTTCAATGGTTTTGTGATT+GGG - Chr1:11718730-11718749 MsG0180000824.01.T01:CDS 35.0%
!!! TGGAGGATTTCTTTTCAAGT+CGG - Chr1:11719290-11719309 MsG0180000824.01.T01:intron 35.0%
!!! TGGTTCAATGGTTTTGTGAT+TGG - Chr1:11718729-11718748 MsG0180000824.01.T01:CDS 35.0%
!!! TGTCGGTTTTACAATGTATC+AGG - Chr1:11720709-11720728 MsG0180000824.01.T01:intron 35.0%
AAACTGTTCGTCTATGCAAG+TGG - Chr1:11720243-11720262 MsG0180000824.01.T01:intron 40.0%
AAATTGCCTTTACCTCACAC+AGG - Chr1:11722325-11722344 MsG0180000824.01.T01:intron 40.0%
AACCTTGAGAATTCGGTAGA+TGG - Chr1:11719192-11719211 MsG0180000824.01.T01:intron 40.0%
AACTGTTCGTCTATGCAAGT+GGG - Chr1:11720244-11720263 MsG0180000824.01.T01:intron 40.0%
AAGATGGAATTGTGCGATTG+TGG - Chr1:11719798-11719817 MsG0180000824.01.T01:intron 40.0%
AATATGCTGGCCCTTAAAAG+AGG - Chr1:11722348-11722367 MsG0180000824.01.T01:intron 40.0%
ACCCAGTTTGTAACACGAAA+AGG + Chr1:11718609-11718628 None:intergenic 40.0%
ACTCATGAGTTTCATGGTCA+TGG - Chr1:11720032-11720051 MsG0180000824.01.T01:intron 40.0%
ACTTCCAATTGTCATGCATG+GGG - Chr1:11721860-11721879 MsG0180000824.01.T01:intron 40.0%
AGAAGATTAAGTCTTGCGAG+CGG - Chr1:11721561-11721580 MsG0180000824.01.T01:intron 40.0%
AGAGATTGTGTGAAAGAGAG+AGG - Chr1:11722447-11722466 MsG0180000824.01.T01:intron 40.0%
AGATTGAGAACATCTCTGTG+TGG + Chr1:11718339-11718358 None:intergenic 40.0%
AGTAGTGTGAGCAAAAGTCA+TGG - Chr1:11719262-11719281 MsG0180000824.01.T01:intron 40.0%
ATAAAAAATGTTGCCCACCG+TGG - Chr1:11717289-11717308 MsG0180000824.01.T01:intron 40.0%
ATGACCATGAAACTCATGAG+TGG + Chr1:11720033-11720052 None:intergenic 40.0%
ATTGGATATGGGTAAGGTAG+CGG - Chr1:11715510-11715529 MsG0180000824.01.T01:three_prime_UTR 40.0%
CAACAGGAGAATCTGATAAC+AGG - Chr1:11719596-11719615 MsG0180000824.01.T01:intron 40.0%
CAAGAAATTGTCCACCCAAT+TGG - Chr1:11720543-11720562 MsG0180000824.01.T01:intron 40.0%
CAGTGGATACATTAGAACCA+CGG + Chr1:11722259-11722278 None:intergenic 40.0%
CATATTCCTGTGTGAGGTAA+AGG + Chr1:11722334-11722353 None:intergenic 40.0%
CATGCCAAACAAAACAACAC+CGG + Chr1:11717248-11717267 None:intergenic 40.0%
CCAATAATCCCTACCTGTAA+AGG + Chr1:11720673-11720692 None:intergenic 40.0%
CCATCCGAGTATAAAAGATG+CGG + Chr1:11721454-11721473 None:intergenic 40.0%
CCGAAGCAAATCCATAATTG+AGG + Chr1:11722012-11722031 None:intergenic 40.0%
CCTTTACAGGTAGGGATTAT+TGG - Chr1:11720670-11720689 MsG0180000824.01.T01:intron 40.0%
CGTCATGCAAGAAACAAAGA+AGG - Chr1:11719672-11719691 MsG0180000824.01.T01:intron 40.0%
CTACCTTACCCATATCCAAT+GGG + Chr1:11715510-11715529 None:intergenic 40.0%
CTCCCACTATTCATATTTCC+TGG - Chr1:11717443-11717462 MsG0180000824.01.T01:CDS 40.0%
CTTTGTGCGAGATGAATTAC+CGG - Chr1:11716258-11716277 MsG0180000824.01.T01:three_prime_UTR 40.0%
GAAACCACTCATGAGTTTCA+TGG - Chr1:11720026-11720045 MsG0180000824.01.T01:intron 40.0%
GAAAGTGGTCTTTCCTAGAA+TGG - Chr1:11721960-11721979 MsG0180000824.01.T01:intron 40.0%
GAGAAGAAACACAATGGAAG+AGG + Chr1:11718294-11718313 None:intergenic 40.0%
GAGATTCATTCAAGAGGAAG+TGG - Chr1:11722489-11722508 MsG0180000824.01.T01:intron 40.0%
GAGCCAGGAAATATGAATAG+TGG + Chr1:11717449-11717468 None:intergenic 40.0%
GATACAATTAGGCATGGCAA+TGG + Chr1:11715582-11715601 None:intergenic 40.0%
GATTGAGAACATCTCTGTGT+GGG + Chr1:11718338-11718357 None:intergenic 40.0%
GGCACATATAGCATAGATAG+TGG - Chr1:11716801-11716820 MsG0180000824.01.T01:intron 40.0%
GTACTTCCAATTGTCATGCA+TGG - Chr1:11721858-11721877 MsG0180000824.01.T01:intron 40.0%
GTGTCAATCTCAGATGCAAA+TGG - Chr1:11719019-11719038 MsG0180000824.01.T01:intron 40.0%
TAATTCATCTCGCACAAAGG+TGG + Chr1:11716257-11716276 None:intergenic 40.0%
TACAATTAGGCATGGCAATG+GGG + Chr1:11715580-11715599 None:intergenic 40.0%
TACCTTACCCATATCCAATG+GGG + Chr1:11715509-11715528 None:intergenic 40.0%
TCAACTTCGACAGCATCAAA+AGG - Chr1:11722090-11722109 MsG0180000824.01.T01:intron 40.0%
TCATAAGGTCTTCCGTTTGA+TGG - Chr1:11720002-11720021 MsG0180000824.01.T01:intron 40.0%
TCTGACACTTCATCTGTAGT+GGG + Chr1:11717342-11717361 None:intergenic 40.0%
TGAAGTAGGAAGTTTCTCCT+CGG + Chr1:11721772-11721791 None:intergenic 40.0%
TGAGTGGTTTCTCCATCAAA+CGG + Chr1:11720017-11720036 None:intergenic 40.0%
TTACTCTTAGGGCTTGAAGT+AGG + Chr1:11721786-11721805 None:intergenic 40.0%
TTCCATCTACCGAATTCTCA+AGG + Chr1:11719197-11719216 None:intergenic 40.0%
TTCTGACACTTCATCTGTAG+TGG + Chr1:11717343-11717362 None:intergenic 40.0%
TTGCTTCATGACATGCATGA+TGG - Chr1:11719568-11719587 MsG0180000824.01.T01:intron 40.0%
TTGGATATGAATTGTGGACC+AGG - Chr1:11719103-11719122 MsG0180000824.01.T01:CDS 40.0%
TTTGTGATTGGGATCTCTGT+TGG - Chr1:11718741-11718760 MsG0180000824.01.T01:CDS 40.0%
! ATAGTTTGGGGGTGTAGATA+AGG - Chr1:11718867-11718886 MsG0180000824.01.T01:intron 40.0%
! ATCAGTAGAGTCTAGTTTCC+AGG + Chr1:11717271-11717290 None:intergenic 40.0%
! CGCTCCCACTTTATAAGTTT+TGG - Chr1:11721319-11721338 MsG0180000824.01.T01:intron 40.0%
! CTTGAGGTGACCTCTTATTT+AGG + Chr1:11721668-11721687 None:intergenic 40.0%
! GAAAGACGTTGTTTCATTCC+TGG - Chr1:11719625-11719644 MsG0180000824.01.T01:intron 40.0%
! GCGAATCTGATGTCTTTTTC+AGG + Chr1:11719958-11719977 None:intergenic 40.0%
! GGTGCTACATATGCAGATAA+AGG + Chr1:11720768-11720787 None:intergenic 40.0%
! TACTGTGAGATAATGGTGGT+GGG - Chr1:11722520-11722539 MsG0180000824.01.T01:intron 40.0%
! TCGAATTGCACCCTTGTTTA+TGG - Chr1:11719904-11719923 MsG0180000824.01.T01:intron 40.0%
! TCTTCTGGAAGAGGAATAAC+CGG - Chr1:11721074-11721093 MsG0180000824.01.T01:intron 40.0%
! TGAATAGAAGCACAATGGCT+AGG - Chr1:11718950-11718969 MsG0180000824.01.T01:intron 40.0%
! TGCACCCTTGTTTATGGATA+AGG - Chr1:11719910-11719929 MsG0180000824.01.T01:intron 40.0%
! TGGTCATGGAGGTGAAATTT+TGG - Chr1:11720046-11720065 MsG0180000824.01.T01:intron 40.0%
! TTACTGTGAGATAATGGTGG+TGG - Chr1:11722519-11722538 MsG0180000824.01.T01:intron 40.0%
! TTTGAAGTTGCATGTCGTGT+CGG + Chr1:11720838-11720857 None:intergenic 40.0%
!! ACTTTTCGAGCTTCCACTTT+CGG - Chr1:11722183-11722202 MsG0180000824.01.T01:intron 40.0%
!! AGTAGGTTTTGATCAGTCAG+TGG - Chr1:11719405-11719424 MsG0180000824.01.T01:intron 40.0%
!! ATGCATGATGGATGTACAAC+AGG - Chr1:11719580-11719599 MsG0180000824.01.T01:intron 40.0%
!! TAAGGTAGCGGGTAAGTATA+TGG - Chr1:11715522-11715541 MsG0180000824.01.T01:three_prime_UTR 40.0%
!! TTCAGAATTTGGTGCTTTGG+TGG - Chr1:11719345-11719364 MsG0180000824.01.T01:intron 40.0%
AAACCGACAATTGCCTGTCA+TGG + Chr1:11720698-11720717 None:intergenic 45.0%
AATCCCCTGAAATCCGAAAG+TGG + Chr1:11722199-11722218 None:intergenic 45.0%
AATCTCATCTCCGTCTCCAA+CGG + Chr1:11715475-11715494 None:intergenic 45.0%
AGAATTCGGCATGCGATGAT+AGG - Chr1:11719368-11719387 MsG0180000824.01.T01:intron 45.0%
AGCATCAAAAGGATACCAGC+AGG - Chr1:11722101-11722120 MsG0180000824.01.T01:intron 45.0%
AGCGGGTAAGTATATGGTAG+CGG - Chr1:11715528-11715547 MsG0180000824.01.T01:three_prime_UTR 45.0%
AGCTTCCACTTTCGGATTTC+AGG - Chr1:11722191-11722210 MsG0180000824.01.T01:intron 45.0%
AGGAAATGTTAACAGTGCCC+CGG + Chr1:11717608-11717627 None:intergenic 45.0%
ATCCCCATTGGATATGGGTA+AGG - Chr1:11715504-11715523 MsG0180000824.01.T01:three_prime_UTR 45.0%
ATCGAAGTAAACAACCACGG+TGG + Chr1:11717306-11717325 None:intergenic 45.0%
CAAACGGAAGACCTTATGAG+AGG + Chr1:11720001-11720020 None:intergenic 45.0%
CAAGATATTCAAGCGCACGA+AGG - Chr1:11719718-11719737 MsG0180000824.01.T01:intron 45.0%
CACGCATCCATATGAAGTAC+CGG + Chr1:11720789-11720808 None:intergenic 45.0%
CATGAGTTTCATGGTCATGG+AGG - Chr1:11720035-11720054 MsG0180000824.01.T01:intron 45.0%
CGATGTCCTTGGAAAATTGC+TGG - Chr1:11722034-11722053 MsG0180000824.01.T01:intron 45.0%
CGGTAATTCATCTCGCACAA+AGG + Chr1:11716260-11716279 None:intergenic 45.0%
CTCACTTCATTCAGCATGTC+TGG - Chr1:11717188-11717207 MsG0180000824.01.T01:intron 45.0%
CTGTGGAATGTTAGTGACGA+CGG - Chr1:11721518-11721537 MsG0180000824.01.T01:intron 45.0%
CTTCCACTTTCGGATTTCAG+GGG - Chr1:11722193-11722212 MsG0180000824.01.T01:intron 45.0%
GAGGACCAGAATCAACTTCA+GGG + Chr1:11719057-11719076 None:intergenic 45.0%
GCATGCGATGATAGGAATGA+TGG - Chr1:11719376-11719395 MsG0180000824.01.T01:intron 45.0%
GCTACCTTACCCATATCCAA+TGG + Chr1:11715511-11715530 None:intergenic 45.0%
GCTTCCACTTTCGGATTTCA+GGG - Chr1:11722192-11722211 MsG0180000824.01.T01:intron 45.0%
GGATAAGTTGCGGAACCTTT+CGG + Chr1:11721751-11721770 None:intergenic 45.0%
GTCATGTTAACCGATATCCC+CGG - Chr1:11716766-11716785 MsG0180000824.01.T01:intron 45.0%
GTGTAGGATTCAGCGAGTTA+AGG - Chr1:11719647-11719666 MsG0180000824.01.T01:intron 45.0%
GTTGAGATCGTGGACAAAGA+GGG - Chr1:11719521-11719540 MsG0180000824.01.T01:intron 45.0%
GTTTCTCCTCGGATAAGTTG+CGG + Chr1:11721761-11721780 None:intergenic 45.0%
TACCTCACACAGGAATATGC+TGG - Chr1:11722335-11722354 MsG0180000824.01.T01:intron 45.0%
TAGACCCCATGCATGACAAT+TGG + Chr1:11721867-11721886 None:intergenic 45.0%
TAGTAATCGTGACTGCTGGT+TGG - Chr1:11721885-11721904 MsG0180000824.01.T01:intron 45.0%
TCAAATGCCTGAGGTTGGAA+GGG - Chr1:11722630-11722649 MsG0180000824.01.T01:CDS 45.0%
TCAGATTTCAAACCACCCCA+AGG + Chr1:11721615-11721634 None:intergenic 45.0%
TCATGTTAACCGATATCCCC+GGG - Chr1:11716767-11716786 MsG0180000824.01.T01:intron 45.0%
TCGAAGTAAACAACCACGGT+GGG + Chr1:11717305-11717324 None:intergenic 45.0%
TGGTGCTTTGGTGGAGAATT+CGG - Chr1:11719354-11719373 MsG0180000824.01.T01:intron 45.0%
TGTACCGTGTTCTATGTGAG+TGG + Chr1:11716902-11716921 None:intergenic 45.0%
TGTGGAATGTTAGTGACGAC+GGG - Chr1:11721519-11721538 MsG0180000824.01.T01:intron 45.0%
TGTGTGAAAGAGAGAGGAGA+GGG - Chr1:11722453-11722472 MsG0180000824.01.T01:intron 45.0%
TGTTGAGATCGTGGACAAAG+AGG - Chr1:11719520-11719539 MsG0180000824.01.T01:intron 45.0%
TTCCAACCTCAGGCATTTGA+GGG + Chr1:11722630-11722649 None:intergenic 45.0%
TTGAGGGTCCTACCATGAAA+TGG + Chr1:11722614-11722633 None:intergenic 45.0%
TTGGAAGGGTGATGATTGGA+TGG - Chr1:11722644-11722663 MsG0180000824.01.T01:CDS 45.0%
TTGGATATGGGTAAGGTAGC+GGG - Chr1:11715511-11715530 MsG0180000824.01.T01:three_prime_UTR 45.0%
TTGTGTGAAAGAGAGAGGAG+AGG - Chr1:11722452-11722471 MsG0180000824.01.T01:intron 45.0%
TTGTTGAACGGATGGAGACA+TGG + Chr1:11716083-11716102 None:intergenic 45.0%
! ACTGTGAGATAATGGTGGTG+GGG - Chr1:11722521-11722540 MsG0180000824.01.T01:intron 45.0%
! AGGAATGATGGAGTGGAAGT+AGG - Chr1:11719388-11719407 MsG0180000824.01.T01:intron 45.0%
! AGTAATCGTGACTGCTGGTT+GGG - Chr1:11721886-11721905 MsG0180000824.01.T01:intron 45.0%
! AGTTGATTCTGGTCCTCCTT+TGG - Chr1:11719060-11719079 MsG0180000824.01.T01:intron 45.0%
! CCGCATCTTTTATACTCGGA+TGG - Chr1:11721451-11721470 MsG0180000824.01.T01:intron 45.0%
! CGATGATAGGAATGATGGAG+TGG - Chr1:11719381-11719400 MsG0180000824.01.T01:intron 45.0%
! CGTTGTTTCATTCCTGGTGT+AGG - Chr1:11719631-11719650 MsG0180000824.01.T01:intron 45.0%
! GACAACCCTGAAGTTGATTC+TGG - Chr1:11719049-11719068 MsG0180000824.01.T01:intron 45.0%
! TACCATGCATGAGTTTGGTG+AGG - Chr1:11719479-11719498 MsG0180000824.01.T01:intron 45.0%
! TAGCAGCCAGCAATTTTCCA+AGG + Chr1:11722043-11722062 None:intergenic 45.0%
! TCTGACTTGTGAATCAGCAC+AGG + Chr1:11721251-11721270 None:intergenic 45.0%
!! GCAGTATTTGCTGTCATCGT+CGG - Chr1:11720214-11720233 MsG0180000824.01.T01:intron 45.0%
!! TGTAGCACCGGTACTTCATA+TGG - Chr1:11720779-11720798 MsG0180000824.01.T01:intron 45.0%
!!! GAGGGTTTGCTGAGAGATTT+TGG - Chr1:11719084-11719103 MsG0180000824.01.T01:intron 45.0%
!!! GTTGTTTTGTTTGGCATGCC+TGG - Chr1:11717250-11717269 MsG0180000824.01.T01:intron 45.0%
!!! TGCACCGGTGTTGTTTTGTT+TGG - Chr1:11717241-11717260 MsG0180000824.01.T01:intron 45.0%
!!! AAAAAAAATAAAACATTTTA+AGG + Chr1:11718484-11718503 None:intergenic 5.0%
!!! AGTTATTTTATTTAATTTTT+TGG + Chr1:11716424-11716443 None:intergenic 5.0%
!!! TTTTTTGATAAATAATAATA+AGG + Chr1:11717628-11717647 None:intergenic 5.0%
AAATGTTAACAGTGCCCCGG+AGG + Chr1:11717605-11717624 None:intergenic 50.0%
AACTCGCTGAATCCTACACC+AGG + Chr1:11719646-11719665 None:intergenic 50.0%
AAGGTTCCGCAACTTATCCG+AGG - Chr1:11721752-11721771 MsG0180000824.01.T01:intron 50.0%
AATTAGGCATGGCAATGGGG+CGG + Chr1:11715577-11715596 None:intergenic 50.0%
ATAGCAAGATACTGGCCGTC+CGG + Chr1:11719769-11719788 None:intergenic 50.0%
ATCATCACCCTTCCAACCTC+AGG + Chr1:11722640-11722659 None:intergenic 50.0%
ATCTCATCTCCGTCTCCAAC+GGG + Chr1:11715474-11715493 None:intergenic 50.0%
ATTCTGGTCCTCCTTTGGTG+AGG - Chr1:11719065-11719084 MsG0180000824.01.T01:intron 50.0%
ATTGGCACCGCAGTGTCTAT+CGG - Chr1:11720561-11720580 MsG0180000824.01.T01:intron 50.0%
CATCTGTTGCAGTGACCTTG+GGG - Chr1:11721597-11721616 MsG0180000824.01.T01:intron 50.0%
CATGTTAACCGATATCCCCG+GGG - Chr1:11716768-11716787 MsG0180000824.01.T01:intron 50.0%
CTACGCTCTCTAACACTACC+CGG + Chr1:11719132-11719151 None:intergenic 50.0%
CTCAAATGCCTGAGGTTGGA+AGG - Chr1:11722629-11722648 MsG0180000824.01.T01:CDS 50.0%
CTCCTCACCAAACTCATGCA+TGG + Chr1:11719484-11719503 None:intergenic 50.0%
CTTCCAACCTCAGGCATTTG+AGG + Chr1:11722631-11722650 None:intergenic 50.0%
GAAGAACAGAAAGGCGGTTG+AGG + Chr1:11720315-11720334 None:intergenic 50.0%
GAGGTTGGAAGGGTGATGAT+TGG - Chr1:11722640-11722659 MsG0180000824.01.T01:CDS 50.0%
GCATCTGTTGCAGTGACCTT+GGG - Chr1:11721596-11721615 MsG0180000824.01.T01:intron 50.0%
GCGATTGTGGCAAGTTGTTG+AGG - Chr1:11719811-11719830 MsG0180000824.01.T01:intron 50.0%
GCGGGTAAGTATATGGTAGC+GGG - Chr1:11715529-11715548 MsG0180000824.01.T01:three_prime_UTR 50.0%
GCTCCATGACAGGCAATTGT+CGG - Chr1:11720692-11720711 MsG0180000824.01.T01:intron 50.0%
GGAATAGTCCGTGCTTAGCA+CGG - Chr1:11715953-11715972 MsG0180000824.01.T01:three_prime_UTR 50.0%
GGACAGGTATGTTGAGATCG+TGG - Chr1:11719511-11719530 MsG0180000824.01.T01:intron 50.0%
GGAGGACCAGAATCAACTTC+AGG + Chr1:11719058-11719077 None:intergenic 50.0%
GGATCAAGGCATACAGCTTG+AGG + Chr1:11721684-11721703 None:intergenic 50.0%
GGCAAGTTGTTGAGGATGAG+AGG - Chr1:11719819-11719838 MsG0180000824.01.T01:intron 50.0%
GGGATCTCTGTTGGATCTCT+TGG - Chr1:11718750-11718769 MsG0180000824.01.T01:CDS 50.0%
GGTCTAGTAATCGTGACTGC+TGG - Chr1:11721881-11721900 MsG0180000824.01.T01:intron 50.0%
TCGCACAATTCCATCTTCGC+CGG + Chr1:11719795-11719814 None:intergenic 50.0%
TCTCAGCAAACCCTCACCAA+AGG + Chr1:11719079-11719098 None:intergenic 50.0%
TGAATTGTGGACCAGGAGTC+CGG - Chr1:11719110-11719129 MsG0180000824.01.T01:CDS 50.0%
TGTGCGAGATGAATTACCGG+TGG - Chr1:11716261-11716280 MsG0180000824.01.T01:three_prime_UTR 50.0%
TTCTGGTCCTCCTTTGGTGA+GGG - Chr1:11719066-11719085 MsG0180000824.01.T01:intron 50.0%
! AGTTTGGTGAGGAGTTCGAG+GGG - Chr1:11719490-11719509 MsG0180000824.01.T01:intron 50.0%
! ATAGACACTGCGGTGCCAAT+TGG + Chr1:11720561-11720580 None:intergenic 50.0%
! GAGTTTGGTGAGGAGTTCGA+GGG - Chr1:11719489-11719508 MsG0180000824.01.T01:intron 50.0%
! GCCAGTATCTTGCTATGTGC+CGG - Chr1:11719773-11719792 MsG0180000824.01.T01:intron 50.0%
! TAGACACTGCGGTGCCAATT+GGG + Chr1:11720560-11720579 None:intergenic 50.0%
! TGAGTTTGGTGAGGAGTTCG+AGG - Chr1:11719488-11719507 MsG0180000824.01.T01:intron 50.0%
!! CTGTGAGATAATGGTGGTGG+GGG - Chr1:11722522-11722541 MsG0180000824.01.T01:intron 50.0%
!! CTTCTTAGTTTGTGGGAGCG+AGG + Chr1:11721546-11721565 None:intergenic 50.0%
!! GGGATTATTGGCTCCATGAC+AGG - Chr1:11720682-11720701 MsG0180000824.01.T01:intron 50.0%
!! TGTGAGATAATGGTGGTGGG+GGG - Chr1:11722523-11722542 MsG0180000824.01.T01:intron 50.0%
AGCTTCCTTAACCAGTGCCC+CGG + Chr1:11717481-11717500 None:intergenic 55.0%
ATACCCGAACCCGTTGGAGA+CGG - Chr1:11715462-11715481 MsG0180000824.01.T01:three_prime_UTR 55.0%
ATTAGGCATGGCAATGGGGC+GGG + Chr1:11715576-11715595 None:intergenic 55.0%
CAGCAAACCCTCACCAAAGG+AGG + Chr1:11719076-11719095 None:intergenic 55.0%
CATCAGGCCGATAGACACTG+CGG + Chr1:11720571-11720590 None:intergenic 55.0%
CGCATCTGTTGCAGTGACCT+TGG - Chr1:11721595-11721614 MsG0180000824.01.T01:intron 55.0%
CTTCCTTAACCAGTGCCTCC+GGG - Chr1:11717587-11717606 MsG0180000824.01.T01:intron 55.0%
GAATTGTGGACCAGGAGTCC+GGG - Chr1:11719111-11719130 MsG0180000824.01.T01:CDS 55.0%
GACCCTCAAATGCCTGAGGT+TGG - Chr1:11722625-11722644 MsG0180000824.01.T01:CDS 55.0%
GCAACAGACCGTGCTAAGCA+CGG + Chr1:11715964-11715983 None:intergenic 55.0%
GCCGGCACATAGCAAGATAC+TGG + Chr1:11719777-11719796 None:intergenic 55.0%
GCTTCCTTAACCAGTGCCTC+CGG - Chr1:11717586-11717605 MsG0180000824.01.T01:intron 55.0%
GGCCAGCATATTCCTGTGTG+AGG + Chr1:11722340-11722359 None:intergenic 55.0%
GTAGGACCCTCAAATGCCTG+AGG - Chr1:11722621-11722640 MsG0180000824.01.T01:CDS 55.0%
TACCAGCAGGCTGCAGTCAA+AGG - Chr1:11722114-11722133 MsG0180000824.01.T01:intron 55.0%
TCGTGTCGGACACTGACACA+GGG + Chr1:11720824-11720843 None:intergenic 55.0%
TCTAACACTACCCGGACTCC+TGG + Chr1:11719124-11719143 None:intergenic 55.0%
TGCTATATGTGCCTCGTCCC+TGG + Chr1:11716794-11716813 None:intergenic 55.0%
TTCCTTAACCAGTGCCTCCG+GGG - Chr1:11717588-11717607 MsG0180000824.01.T01:intron 55.0%
TTGCTTCGGCACGATGTCCT+TGG - Chr1:11722023-11722042 MsG0180000824.01.T01:intron 55.0%
! ATCGTGACTGCTGGTTGGGA+TGG - Chr1:11721890-11721909 MsG0180000824.01.T01:intron 55.0%
! ATCTCCGTCTCCAACGGGTT+CGG + Chr1:11715469-11715488 None:intergenic 55.0%
! CGGGTAGTGTTAGAGAGCGT+AGG - Chr1:11719130-11719149 MsG0180000824.01.T01:CDS 55.0%
! TCGTGACTGCTGGTTGGGAT+GGG - Chr1:11721891-11721910 MsG0180000824.01.T01:intron 55.0%
! TGTCTATCGGCCTGATGGAC+AGG - Chr1:11720574-11720593 MsG0180000824.01.T01:intron 55.0%
! TTGCTATGTGCCGGCGAAGA+TGG - Chr1:11719782-11719801 MsG0180000824.01.T01:intron 55.0%
!! ATGGTGGTGGGGGGTATTTG+TGG - Chr1:11722532-11722551 MsG0180000824.01.T01:intron 55.0%
CGCAGTGTCTATCGGCCTGA+TGG - Chr1:11720569-11720588 MsG0180000824.01.T01:intron 60.0%
CTGTTGCAGTGACCTTGGGG+TGG - Chr1:11721600-11721619 MsG0180000824.01.T01:intron 60.0%
GACAAGTGGCTTCACGACCG+TGG - Chr1:11722239-11722258 MsG0180000824.01.T01:intron 60.0%
GACCTTTGACTGCAGCCTGC+TGG + Chr1:11722119-11722138 None:intergenic 60.0%
GAGAGAGGAGAGGGAGAGAG+AGG - Chr1:11722462-11722481 MsG0180000824.01.T01:intron 60.0%
GCTTCCTTAACCAGTGCCCC+GGG + Chr1:11717480-11717499 None:intergenic 60.0%
GTCGGACACTGACACAGGGT+GGG + Chr1:11720820-11720839 None:intergenic 60.0%
GTCGTGTCGGACACTGACAC+AGG + Chr1:11720825-11720844 None:intergenic 60.0%
TGTCGGACACTGACACAGGG+TGG + Chr1:11720821-11720840 None:intergenic 60.0%
! ACACTGCGGTGCCAATTGGG+TGG + Chr1:11720557-11720576 None:intergenic 60.0%
! TCTCCGTCTCCAACGGGTTC+GGG + Chr1:11715468-11715487 None:intergenic 60.0%
AACCGATATCCCCGGGGCCA+GGG - Chr1:11716774-11716793 MsG0180000824.01.T01:intron 65.0%
GGTGAGGAGTTCGAGGGGAC+AGG - Chr1:11719495-11719514 MsG0180000824.01.T01:intron 65.0%
GTGGGGATACCCGAACCCGT+TGG - Chr1:11715456-11715475 MsG0180000824.01.T01:three_prime_UTR 65.0%
TAACCGATATCCCCGGGGCC+AGG - Chr1:11716773-11716792 MsG0180000824.01.T01:intron 65.0%
TTAACCAGTGCCCCGGGCAG+TGG + Chr1:11717474-11717493 None:intergenic 65.0%
! TAACAGTGCCCCGGAGGCAC+TGG + Chr1:11717599-11717618 None:intergenic 65.0%
!! ACTGCCCGGGGCACTGGTTA+AGG - Chr1:11717473-11717492 MsG0180000824.01.T01:intron 65.0%
!! TGCCCCGGAGGCACTGGTTA+AGG + Chr1:11717593-11717612 None:intergenic 65.0%
AGGCATGGCAATGGGGCGGG+TGG + Chr1:11715573-11715592 None:intergenic 70.0%
ATGTGCCTCGTCCCTGGCCC+CGG + Chr1:11716788-11716807 None:intergenic 70.0%
GCATGGCAATGGGGCGGGTG+GGG + Chr1:11715571-11715590 None:intergenic 70.0%
GGCATGGCAATGGGGCGGGT+GGG + Chr1:11715572-11715591 None:intergenic 70.0%
GTCCCTGGCCCCGGGGATAT+CGG + Chr1:11716779-11716798 None:intergenic 70.0%
TTCCTGGCTCCGCCACTGCC+CGG - Chr1:11717459-11717478 MsG0180000824.01.T01:CDS 70.0%
ACCAGTGCCCCGGGCAGTGG+CGG + Chr1:11717471-11717490 None:intergenic 75.0%
TATCCCCGGGGCCAGGGACG+AGG - Chr1:11716780-11716799 MsG0180000824.01.T01:intron 75.0%
TCCTGGCTCCGCCACTGCCC+GGG - Chr1:11717460-11717479 MsG0180000824.01.T01:CDS 75.0%
TGTGCCTCGTCCCTGGCCCC+GGG + Chr1:11716787-11716806 None:intergenic 75.0%
! CCTGGCTCCGCCACTGCCCG+GGG - Chr1:11717461-11717480 MsG0180000824.01.T01:CDS 80.0%
! GTGCCTCGTCCCTGGCCCCG+GGG + Chr1:11716786-11716805 None:intergenic 80.0%
! TCCGCCACTGCCCGGGGCAC+TGG - Chr1:11717467-11717486 MsG0180000824.01.T01:intron 80.0%
!! CCCCGGGCAGTGGCGGAGCC+AGG + Chr1:11717464-11717483 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr1 gene 11715451 11722712 11715451 ID=MsG0180000824.01;Name=MsG0180000824.01
Chr1 mRNA 11715451 11722712 11715451 ID=MsG0180000824.01.T01;Parent=MsG0180000824.01;Name=MsG0180000824.01.T01;_AED=0.28;_eAED=0.28;_QI=0|0.2|0.16|0.83|0.6|0.66|6|1279|151
Chr1 exon 11722613 11722712 11722613 ID=MsG0180000824.01.T01:exon:624;Parent=MsG0180000824.01.T01
Chr1 exon 11719093 11719191 11719093 ID=MsG0180000824.01.T01:exon:625;Parent=MsG0180000824.01.T01
Chr1 exon 11718707 11718813 11718707 ID=MsG0180000824.01.T01:exon:626;Parent=MsG0180000824.01.T01
Chr1 exon 11717433 11717484 11717433 ID=MsG0180000824.01.T01:exon:627;Parent=MsG0180000824.01.T01
Chr1 exon 11716856 11716948 11716856 ID=MsG0180000824.01.T01:exon:628;Parent=MsG0180000824.01.T01
Chr1 exon 11715451 11716734 11715451 ID=MsG0180000824.01.T01:exon:629;Parent=MsG0180000824.01.T01
Chr1 CDS 11722613 11722712 11722613 ID=MsG0180000824.01.T01:cds;Parent=MsG0180000824.01.T01
Chr1 CDS 11719093 11719191 11719093 ID=MsG0180000824.01.T01:cds;Parent=MsG0180000824.01.T01
Chr1 CDS 11718707 11718813 11718707 ID=MsG0180000824.01.T01:cds;Parent=MsG0180000824.01.T01
Chr1 CDS 11717433 11717484 11717433 ID=MsG0180000824.01.T01:cds;Parent=MsG0180000824.01.T01
Chr1 CDS 11716856 11716948 11716856 ID=MsG0180000824.01.T01:cds;Parent=MsG0180000824.01.T01
Chr1 CDS 11716730 11716734 11716730 ID=MsG0180000824.01.T01:cds;Parent=MsG0180000824.01.T01
Chr1 three_prime_UTR 11715451 11716729 11715451 ID=MsG0180000824.01.T01:three_prime_utr;Parent=MsG0180000824.01.T01
Gene Sequence

>MsG0180000824.01.T01

ATGGGGTGGGGATACCCGAACCCGTTGGAGACGGAGATGAGATTCGATTTCTTATCCCCATTGGATATGGGTAAGGTAGCGGGTAAGTATATGGTAGCGGGTTCAGCGAAGAAGAAGTTTCAATTTTTTGATGCTCAAGATGATATTGTGTCAATCTCAGATGCAAATGGTGTTGCTGACAACCCTGAAGTTGATTCTGAATTTGGTGCTTTGGTGGAGAATTCGGCATGCGATGATAGGAATGATGGAGTGGAAGTAGGTTTTGATCAGTCAGTGGTTTCGGATGAATCTGTGAACGCTGCTGAGGTAGGGATTATTGGCTCCATGACAGGCAATTGTCGGTTTTACAATGTATCAGTTTCTTCACAAGATTTAAACAAAGTTATGGTTACCTGTGCTGATTCACAAGTCAGAATCATTGAAGGGCTTAATGTCGTTGAAAAATTCAAAGGTTAA

Protein sequence

>MsG0180000824.01.T01

MGWGYPNPLETEMRFDFLSPLDMGKVAGKYMVAGSAKKKFQFFDAQDDIVSISDANGVADNPEVDSEFGALVENSACDDRNDGVEVGFDQSVVSDESVNAAEVGIIGSMTGNCRFYNVSVSSQDLNKVMVTCADSQVRIIEGLNVVEKFKG*