AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029704.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029704.01.T01 MTR_5g091180 93.848 699 37 2 14 712 10 702 0.0 1320
MsG0580029704.01.T01 MTR_5g091450 61.315 791 225 8 23 739 9 792 0.0 888
MsG0580029704.01.T01 MTR_5g091430 64.428 551 176 5 207 739 2 550 0.0 665
MsG0580029704.01.T01 MTR_5g091410 55.000 580 202 8 185 739 4 549 0.0 539
MsG0580029704.01.T01 MTR_5g091550 55.882 476 173 7 47 497 15 478 2.70e-163 480
MsG0580029704.01.T01 MTR_5g091550 55.301 481 173 8 47 497 15 483 5.05e-161 474
MsG0580029704.01.T01 MTR_5g091530 56.650 406 143 2 91 485 1 384 2.21e-142 423
MsG0580029704.01.T01 MTR_5g086700 65.411 292 87 2 174 453 533 822 1.52e-103 342
MsG0580029704.01.T01 MTR_5g086700 58.503 147 58 2 29 175 41 184 8.64e-46 177
MsG0580029704.01.T01 MTR_5g086700 65.411 292 87 2 174 453 533 822 1.64e-103 342
MsG0580029704.01.T01 MTR_5g086700 58.503 147 58 2 29 175 41 184 8.77e-46 177
MsG0580029704.01.T01 MTR_3g079840 62.329 292 95 3 178 456 533 822 5.75e-96 322
MsG0580029704.01.T01 MTR_3g079840 57.823 147 61 1 29 175 35 180 1.19e-46 179
MsG0580029704.01.T01 MTR_3g079840 62.329 292 95 3 178 456 532 821 6.67e-96 322
MsG0580029704.01.T01 MTR_3g079840 57.823 147 61 1 29 175 34 179 1.24e-46 179
MsG0580029704.01.T01 MTR_1g041240 45.455 396 190 7 85 456 431 824 2.36e-79 276
MsG0580029704.01.T01 MTR_1g041240 49.342 152 69 3 30 175 32 181 8.08e-39 155
MsG0580029704.01.T01 MTR_1g041240 45.455 396 190 7 85 456 430 823 2.60e-79 275
MsG0580029704.01.T01 MTR_1g041240 49.669 151 69 3 30 175 32 180 6.41e-39 155
MsG0580029704.01.T01 MTR_1g041240 45.455 396 190 7 85 456 429 822 2.66e-79 275
MsG0580029704.01.T01 MTR_1g041240 49.342 152 69 3 30 175 30 179 9.21e-39 155
MsG0580029704.01.T01 MTR_1g042160 35.036 137 86 2 51 184 13 149 2.29e-22 99.0
MsG0580029704.01.T01 MTR_1g073790 38.235 136 81 2 44 177 53 187 3.36e-22 103
MsG0580029704.01.T01 MTR_1g044450 38.235 136 81 2 44 177 56 190 4.13e-21 99.4
MsG0580029704.01.T01 MTR_1g073800 36.000 125 79 1 51 175 49 172 9.33e-21 96.3
MsG0580029704.01.T01 MTR_3g106700 32.105 190 107 6 2 175 357 540 7.80e-16 82.8
MsG0580029704.01.T01 MTR_4g123750 32.374 139 85 4 46 175 14 152 1.11e-15 79.0
MsG0580029704.01.T01 MTR_4g123750 29.630 135 90 4 45 176 170 302 9.93e-11 64.3
MsG0580029704.01.T01 MTR_7g107200 32.812 128 82 3 51 175 13 139 1.71e-15 79.3
MsG0580029704.01.T01 MTR_7g107160 32.353 136 79 4 52 176 131 264 1.09e-14 77.4
MsG0580029704.01.T01 MTR_8g011730 30.818 159 96 6 48 200 8 158 1.38e-14 76.3
MsG0580029704.01.T01 MTR_8g006190 31.304 115 69 3 69 175 10 122 3.12e-14 76.3
MsG0580029704.01.T01 MTR_5g091460 76.190 42 10 0 207 248 2 43 5.68e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029704.01.T01 AT3G11910 52.431 288 122 4 178 453 531 815 2.63e-80 278
MsG0580029704.01.T01 AT3G11910 51.948 154 66 2 30 176 27 179 8.18e-44 171
MsG0580029704.01.T01 AT3G11910 52.431 288 122 4 178 453 531 815 2.63e-80 278
MsG0580029704.01.T01 AT3G11910 51.948 154 66 2 30 176 27 179 8.18e-44 171
MsG0580029704.01.T01 AT3G11910 52.431 288 122 4 178 453 530 814 2.76e-80 278
MsG0580029704.01.T01 AT3G11910 51.948 154 66 2 30 176 26 178 8.86e-44 171
MsG0580029704.01.T01 AT3G11910 52.431 288 122 4 178 453 530 814 2.76e-80 278
MsG0580029704.01.T01 AT3G11910 51.948 154 66 2 30 176 26 178 8.86e-44 171
MsG0580029704.01.T01 AT5G06600 52.397 292 123 5 178 457 533 820 1.36e-76 266
MsG0580029704.01.T01 AT5G06600 56.164 146 62 2 32 176 36 180 2.06e-45 176
MsG0580029704.01.T01 AT5G06600 52.397 292 123 5 178 457 532 819 3.96e-76 266
MsG0580029704.01.T01 AT5G06600 56.164 146 62 2 32 176 35 179 2.38e-45 176
MsG0580029704.01.T01 AT5G06600 52.397 292 123 5 178 457 533 820 4.07e-76 266
MsG0580029704.01.T01 AT5G06600 56.164 146 62 2 32 176 36 180 2.49e-45 176
MsG0580029704.01.T01 AT3G58250 42.969 128 70 2 51 175 10 137 5.43e-23 100
MsG0580029704.01.T01 AT5G52330 36.774 155 94 3 37 188 4 157 7.05e-22 99.4
MsG0580029704.01.T01 AT5G52330 36.774 155 94 3 37 188 4 157 7.05e-22 99.4
MsG0580029704.01.T01 AT5G52330 36.774 155 94 3 37 188 4 157 7.05e-22 99.4
MsG0580029704.01.T01 AT5G43560 42.336 137 66 3 32 156 39 174 1.75e-21 100
MsG0580029704.01.T01 AT5G43560 42.336 137 66 3 32 156 39 174 1.75e-21 100
MsG0580029704.01.T01 AT3G58210 35.484 155 97 2 51 202 8 162 2.37e-21 96.3
MsG0580029704.01.T01 AT3G58350 35.507 138 85 2 51 184 8 145 5.10e-21 94.7
MsG0580029704.01.T01 AT3G58350 35.507 138 85 2 51 184 8 145 5.10e-21 94.7
MsG0580029704.01.T01 AT3G58270 37.671 146 88 2 51 194 8 152 7.76e-21 95.1
MsG0580029704.01.T01 AT3G58270 37.671 146 88 2 51 194 8 152 7.76e-21 95.1
MsG0580029704.01.T01 AT3G58270 37.671 146 88 2 51 194 8 152 7.76e-21 95.1
MsG0580029704.01.T01 AT3G58370 37.008 127 78 1 51 175 9 135 3.26e-20 92.4
MsG0580029704.01.T01 AT3G58360 36.232 138 85 2 51 186 8 144 4.31e-20 92.0
MsG0580029704.01.T01 AT2G05410 36.552 145 88 3 52 193 9 152 1.31e-19 90.9
MsG0580029704.01.T01 AT1G04300 40.741 108 63 1 51 158 69 175 1.39e-19 94.7
MsG0580029704.01.T01 AT3G58260 37.795 127 76 2 52 175 9 135 1.63e-19 90.9
MsG0580029704.01.T01 AT3G58340 30.088 226 134 6 51 269 8 216 2.05e-18 87.4
MsG0580029704.01.T01 AT3G58340 36.800 125 78 1 51 175 8 131 2.09e-18 87.4
MsG0580029704.01.T01 AT3G27040 33.088 136 89 1 51 184 9 144 2.23e-18 86.3
MsG0580029704.01.T01 AT2G01790 33.813 139 88 2 54 188 11 149 3.23e-18 85.9
MsG0580029704.01.T01 AT1G04300 38.793 116 62 3 51 158 69 183 1.03e-17 88.6
MsG0580029704.01.T01 AT3G58410 32.800 125 80 2 51 175 8 128 1.19e-17 85.1
MsG0580029704.01.T01 AT2G05420 34.437 151 89 3 44 185 2 151 2.90e-17 83.6
MsG0580029704.01.T01 AT3G44790 33.803 142 88 2 51 190 5 142 6.51e-17 83.2
MsG0580029704.01.T01 AT1G04300 43.333 90 50 1 69 158 68 156 7.29e-17 85.9
MsG0580029704.01.T01 AT2G42460 37.313 134 79 3 52 183 10 140 1.34e-15 78.6
MsG0580029704.01.T01 AT3G58290 35.461 141 78 4 46 175 6 144 1.62e-15 78.2
MsG0580029704.01.T01 AT3G58400 31.452 124 82 2 65 186 17 139 2.87e-15 77.8
MsG0580029704.01.T01 AT1G31390 34.454 119 76 1 51 167 8 126 2.87e-15 77.0
MsG0580029704.01.T01 AT3G58220 34.286 140 85 4 44 177 2 140 7.62e-15 76.6
MsG0580029704.01.T01 AT3G58220 34.286 140 85 4 44 177 2 140 9.93e-15 77.0
MsG0580029704.01.T01 AT3G58220 34.286 140 85 4 44 177 2 140 9.99e-15 75.5
MsG0580029704.01.T01 AT3G58220 34.286 140 85 4 44 177 2 140 1.28e-14 77.4
MsG0580029704.01.T01 AT3G58220 34.286 140 85 4 44 177 2 140 1.89e-14 75.9
MsG0580029704.01.T01 AT2G25320 36.296 135 75 4 51 175 404 537 3.20e-14 77.4
MsG0580029704.01.T01 AT2G25320 27.778 126 87 3 54 175 75 200 6.51e-11 66.6
MsG0580029704.01.T01 AT2G25320 36.296 135 75 4 51 175 405 538 3.26e-14 77.4
MsG0580029704.01.T01 AT2G25320 27.778 126 87 3 54 175 76 201 6.51e-11 66.6
MsG0580029704.01.T01 AT3G58200 32.456 114 77 0 51 164 8 121 3.49e-14 74.7
MsG0580029704.01.T01 AT3G44800 26.829 164 118 1 51 212 5 168 6.00e-14 74.3
MsG0580029704.01.T01 AT2G25320 36.296 135 75 4 51 175 405 538 7.95e-14 76.3
MsG0580029704.01.T01 AT3G17380 26.820 261 164 10 46 283 16 272 9.23e-14 73.2
MsG0580029704.01.T01 AT1G31400 30.000 140 91 3 51 186 8 144 1.56e-13 72.0
MsG0580029704.01.T01 AT4G09780 32.955 176 106 7 45 211 208 380 4.56e-13 72.4
MsG0580029704.01.T01 AT2G32870 31.159 138 85 5 47 176 273 408 2.11e-12 70.1
MsG0580029704.01.T01 AT3G20370 33.846 130 80 3 51 175 240 368 1.88e-11 67.0
MsG0580029704.01.T01 AT2G32880 31.111 135 78 5 51 174 178 308 2.00e-11 66.2
MsG0580029704.01.T01 AT4G09770 33.803 142 87 5 45 182 154 292 2.09e-11 66.2
MsG0580029704.01.T01 AT4G09770 33.803 142 87 5 45 182 154 292 2.09e-11 66.2
MsG0580029704.01.T01 AT4G09770 33.803 142 87 5 45 182 180 318 2.55e-11 66.2
MsG0580029704.01.T01 AT3G20370 33.846 130 80 3 51 175 218 346 2.69e-11 66.2
MsG0580029704.01.T01 AT3G58240 29.771 131 91 1 46 176 3 132 3.96e-11 65.5
MsG0580029704.01.T01 AT3G58430 35.065 154 84 8 51 194 8 155 6.42e-11 65.1
MsG0580029704.01.T01 AT2G05410 34.783 115 71 3 82 193 1 114 7.00e-11 63.9

Find 139 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCCATGTGAATTTAAA+TGG 0.161214 5:-100990685 None:intergenic
TCCAATTCAGATTGAGTTTC+CGG 0.182768 5:-100996239 None:intergenic
TTTAGCAAGGTTAAATAAAT+TGG 0.183528 5:+100994323 MsG0580029704.01.T01:CDS
AGCAACTTCTTCAGGAATTA+AGG 0.184830 5:+100995739 MsG0580029704.01.T01:CDS
ATCTTGAATCTCAGCAATTT+TGG 0.186515 5:-100996114 None:intergenic
GACCATTTGTCCATGTATTT+TGG 0.203338 5:+100991010 MsG0580029704.01.T01:CDS
ATCTTGGTTAGTGCTCTTCT+TGG 0.229873 5:-100995973 None:intergenic
CGGCTGGATTCCTGCGCTTT+TGG 0.236440 5:+100993218 MsG0580029704.01.T01:CDS
CAGCACCGACTTGTTCTAAT+TGG 0.250718 5:-100995878 None:intergenic
ATCTTTAAATGTCATATTCT+TGG 0.253088 5:-100992821 None:intergenic
TCCATCACATTGTCCCCTTC+TGG 0.264711 5:-100990989 None:intergenic
TTGAAGCTCAACAGTCAAAA+AGG 0.268817 5:+100995508 MsG0580029704.01.T01:CDS
GCTTCCTCTGTTTGTCTCAT+TGG 0.273188 5:-100993283 None:intergenic
ACCAAATACATAAATCAAAA+TGG 0.280208 5:-100996302 None:intergenic
CAATCGTTTCTTCGACTATA+AGG 0.280493 5:-100995473 None:intergenic
CCTTCAATGCTTCATTATCT+TGG 0.313744 5:-100995989 None:intergenic
TCTAAAGATTCTTCATCTTT+CGG 0.315685 5:-100995435 None:intergenic
ATTGCGTTGAAGTTAACTTT+AGG 0.328934 5:-100995813 None:intergenic
AGAAGAAAGACAACTGATTC+AGG 0.329661 5:+100990045 MsG0580029704.01.T01:CDS
CGAAAACTGCTCACTTTGTC+AGG 0.338038 5:-100992793 None:intergenic
TCTCCCTGAGCAACTTCTTC+AGG 0.349104 5:+100995731 MsG0580029704.01.T01:CDS
CACATTCTTGTTCATTGAAT+CGG 0.349748 5:-100992034 None:intergenic
GTTCAGATGTATTTGATGTT+GGG 0.356091 5:+100990743 MsG0580029704.01.T01:CDS
TCCGGAAACTCAATCTGAAT+TGG 0.358844 5:+100996238 MsG0580029704.01.T01:CDS
TATGACATTTAAAGATTTCA+AGG 0.360154 5:+100992828 MsG0580029704.01.T01:CDS
AGTGTTAATTTCTTGTCAAC+AGG 0.364167 5:-100995045 None:intergenic
AAGAAGTTGCTCAGGGAGAT+TGG 0.365004 5:-100995727 None:intergenic
GAAAGATGAAGAATCTTTAG+AGG 0.365816 5:+100995437 MsG0580029704.01.T01:CDS
ACAGGATCACATTTAACATT+TGG 0.366346 5:-100995027 None:intergenic
TCTTTAAATGTCATATTCTT+GGG 0.382339 5:-100992820 None:intergenic
GTTTGTCTCATTGGCCGAAT+AGG 0.383399 5:-100993274 None:intergenic
ACCATTGTGGATAGCCAGCC+TGG 0.384867 5:+100990649 MsG0580029704.01.T01:CDS
CCAAGATAATGAAGCATTGA+AGG 0.386006 5:+100995989 MsG0580029704.01.T01:CDS
TCTATGTCTGAGAGACAAAT+AGG 0.386039 5:-100995411 None:intergenic
GCAACTTCTTCAGGAATTAA+GGG 0.387841 5:+100995740 MsG0580029704.01.T01:CDS
TCAATGAACAAGAATGTGAT+TGG 0.400524 5:+100992039 MsG0580029704.01.T01:CDS
TGTTCAGATGTATTTGATGT+TGG 0.406273 5:+100990742 MsG0580029704.01.T01:CDS
CAAGAGAGTTGAGTTGTGTT+TGG 0.406897 5:-100996058 None:intergenic
GATTTGCTGGTACCTTCATC+AGG 0.408566 5:-100995546 None:intergenic
TTCACAACATGCCCTCTTGA+AGG 0.409990 5:-100992101 None:intergenic
TCACCTCTACACTATTATAA+AGG 0.410063 5:+100992604 MsG0580029704.01.T01:CDS
TGAAGAGATTGAACTTTATG+AGG 0.412756 5:+100994362 MsG0580029704.01.T01:CDS
CCATCACATTGTCCCCTTCT+GGG 0.417011 5:-100990988 None:intergenic
ACCATACATATCGTCCTATT+CGG 0.420565 5:+100993260 MsG0580029704.01.T01:CDS
CGCCAAAATACATGGACAAA+TGG 0.422835 5:-100991012 None:intergenic
AAGTGTTGAAGATCAAATTC+CGG 0.436652 5:+100996220 MsG0580029704.01.T01:CDS
GGTGACTGGTACTGGTACCA+TGG 0.440214 5:-100994099 None:intergenic
TCTCTCTTGGTGACTGGTAC+TGG 0.441638 5:-100994107 None:intergenic
TGCACATATTTCATGTATGA+AGG 0.442835 5:-100995239 None:intergenic
CAATGAACAAGAATGTGATT+GGG 0.444176 5:+100992040 MsG0580029704.01.T01:CDS
ACAGATTCAGGTGTTGTGTT+GGG 0.451887 5:+100989985 MsG0580029704.01.T01:CDS
TTTGATCATCAACGAGGTGC+TGG 0.453918 5:-100996187 None:intergenic
GAGAGTTGAGTTGTGTTTGG+TGG 0.457037 5:-100996055 None:intergenic
AATTCCTGAAGAAGTTGCTC+AGG 0.459517 5:-100995735 None:intergenic
GCAAGGTTAAATAAATTGGC+TGG 0.463145 5:+100994327 MsG0580029704.01.T01:CDS
TGCATAAATACTCCAACCGT+TGG 0.463303 5:-100991056 None:intergenic
TTCATGTATGAAGGCACATC+GGG 0.465238 5:-100995230 None:intergenic
CAGAAAATTTGCCCAACGGT+TGG 0.465986 5:+100991044 MsG0580029704.01.T01:CDS
CTCGGAAGAATTTGATGCTA+TGG 0.467978 5:+100995596 MsG0580029704.01.T01:CDS
AGAAGTTGCTCAGGGAGATT+GGG 0.468112 5:-100995726 None:intergenic
ATCTGCAACGCCAAAATACA+TGG 0.473771 5:-100991020 None:intergenic
AATGGAGAAGGATCCTTGCC+AGG 0.489880 5:-100990667 None:intergenic
GCCGAATAGGACGATATGTA+TGG 0.490180 5:-100993261 None:intergenic
TTTCTTGGAGGAATGAGATA+AGG 0.492751 5:+100990716 MsG0580029704.01.T01:CDS
TAATATGTCATGCTCTCTCT+TGG 0.496717 5:-100994120 None:intergenic
TGCTAGAGAGTTTGACATAC+CGG 0.498933 5:+100993198 MsG0580029704.01.T01:CDS
TTCAGATGTATTTGATGTTG+GGG 0.500110 5:+100990744 MsG0580029704.01.T01:CDS
TCTCTTATGAGCTGCAAAAG+AGG 0.500572 5:-100990025 None:intergenic
GAAGACCTTGCACAACAGAT+TGG 0.502825 5:+100992742 MsG0580029704.01.T01:CDS
ACAGGCTAGATGACAGATTC+AGG 0.503446 5:+100989973 None:intergenic
TCCTTCTATGGCAGTTATGT+TGG 0.504039 5:+100994261 MsG0580029704.01.T01:intron
CTTCTCCATTTAAATTCACA+TGG 0.505907 5:+100990680 MsG0580029704.01.T01:CDS
AAGGACAAGAATACTCAAAA+CGG 0.506677 5:+100995700 MsG0580029704.01.T01:CDS
TCATGCTCTCTCTTGGTGAC+TGG 0.508189 5:-100994113 None:intergenic
TTGCAAAACTACAAGAAGAC+AGG 0.508255 5:+100996090 MsG0580029704.01.T01:CDS
AGGACAAGAATACTCAAAAC+GGG 0.508495 5:+100995701 MsG0580029704.01.T01:CDS
GAAATATGTGCACAATTGCC+AGG 0.510511 5:+100995250 MsG0580029704.01.T01:CDS
GTGACTGGTACTGGTACCAT+GGG 0.512119 5:-100994098 None:intergenic
CACTCTTGTAGTTGAAGTTG+AGG 0.514118 5:+100992127 MsG0580029704.01.T01:CDS
TTTGGAAGTGGAGCGTGGAC+CGG 0.515148 5:+100993976 MsG0580029704.01.T01:CDS
GAGAAGGATCCTTGCCAGGC+TGG 0.516330 5:-100990663 None:intergenic
TCATCAAGAGGTATGAAGAA+TGG 0.520033 5:-100992068 None:intergenic
GTGTTGGGTCTGTGTTGTGT+TGG 0.520073 5:+100990000 MsG0580029704.01.T01:CDS
AACCTTGCTAAAATTGCTGA+CGG 0.523355 5:-100994312 None:intergenic
GCATAAATACTCCAACCGTT+GGG 0.524822 5:-100991055 None:intergenic
AGAGAGTTTGACATACCGGC+TGG 0.526991 5:+100993202 MsG0580029704.01.T01:CDS
GCTGAGGACTCTGTGACAAA+AGG 0.532529 5:+100991112 MsG0580029704.01.T01:CDS
AGTTAACTTCAACGCAATCA+AGG 0.533918 5:+100995818 MsG0580029704.01.T01:CDS
AAGACATCGCCGACCATGCA+AGG 0.534443 5:+100992171 MsG0580029704.01.T01:CDS
TCCTCACAATGTTGTTGAGA+AGG 0.536532 5:-100995908 None:intergenic
TCTATGGCAGTTATGTTGGA+AGG 0.540150 5:+100994265 MsG0580029704.01.T01:intron
TATTTAGGATTTACGCCCCA+TGG 0.542424 5:+100994082 MsG0580029704.01.T01:intron
CCCAGAAGGGGACAATGTGA+TGG 0.548561 5:+100990988 MsG0580029704.01.T01:CDS
ACCTTGCTAAAATTGCTGAC+GGG 0.548915 5:-100994311 None:intergenic
GACAGATTCAGGTGTTGTGT+TGG 0.550398 5:+100989984 MsG0580029704.01.T01:CDS
CATGTGAATTTAAATGGAGA+AGG 0.550640 5:-100990679 None:intergenic
AATATCTACTTACCCTTGCA+TGG 0.552441 5:-100992184 None:intergenic
CTTTCAGAAAGCTTCTGCAA+TGG 0.553978 5:+100995184 MsG0580029704.01.T01:CDS
CCTTTCCAATCTGTTGTGCA+AGG 0.559503 5:-100992747 None:intergenic
GCTGGTACCTTCATCAGGAG+TGG 0.560775 5:-100995541 None:intergenic
TTGTGTTTGGTGGTTTGTGA+AGG 0.561186 5:-100996045 None:intergenic
TCTACTTACCCTTGCATGGT+CGG 0.561530 5:-100992180 None:intergenic
AAATCTCAACATTCTGTCCA+AGG 0.573610 5:+100995681 MsG0580029704.01.T01:CDS
GCCTTCTCAACAACATTGTG+AGG 0.576781 5:+100995907 MsG0580029704.01.T01:CDS
TGTGGATAGCCAGCCTGGCA+AGG 0.577515 5:+100990654 MsG0580029704.01.T01:CDS
ATAGAGACCACTCCTGATGA+AGG 0.578728 5:+100995534 MsG0580029704.01.T01:CDS
TTGCCCAATACCAAAAGCGC+AGG 0.579940 5:-100993228 None:intergenic
ATTAACACTTACAGAAAGCA+AGG 0.581070 5:+100995059 MsG0580029704.01.T01:CDS
GAAACTCAATCTGAATTGGA+AGG 0.583632 5:+100996242 MsG0580029704.01.T01:CDS
GCCAGGCTGGCTATCCACAA+TGG 0.586961 5:-100990650 None:intergenic
ACCTGAAAATGCCACCATTG+TGG 0.587722 5:+100990636 MsG0580029704.01.T01:CDS
GATTCAGAAAATTTGCCCAA+CGG 0.602356 5:+100991040 MsG0580029704.01.T01:CDS
GAATTATCTGATCCTTCAAG+AGG 0.602555 5:+100992089 MsG0580029704.01.T01:CDS
AATACATAAATCAAAATGGA+GGG 0.604407 5:-100996298 None:intergenic
ATTCCTGAAGAAGTTGCTCA+GGG 0.607984 5:-100995734 None:intergenic
GGATCAGATAATTCATCAAG+AGG 0.613222 5:-100992080 None:intergenic
TTTCATGTATGAAGGCACAT+CGG 0.614320 5:-100995231 None:intergenic
CCATGAATGCAGTTGAACAA+TGG 0.615519 5:+100995149 MsG0580029704.01.T01:intron
AAATACATAAATCAAAATGG+AGG 0.622267 5:-100996299 None:intergenic
AAAATTAGTCAGCATAGACT+CGG 0.622744 5:+100995578 MsG0580029704.01.T01:CDS
TCAGATGTATTTGATGTTGG+GGG 0.629518 5:+100990745 MsG0580029704.01.T01:CDS
CAAAAGCGCAGGAATCCAGC+CGG 0.632153 5:-100993217 None:intergenic
GACTTGTTCTAATTGGAGAG+AGG 0.633400 5:-100995871 None:intergenic
AATGAACAAGAATGTGATTG+GGG 0.637571 5:+100992041 MsG0580029704.01.T01:CDS
TGCAAAACTACAAGAAGACA+GGG 0.640622 5:+100996091 MsG0580029704.01.T01:CDS
GAAAACTGCTCACTTTGTCA+GGG 0.641231 5:-100992792 None:intergenic
ATTTGATGCTATGGTAGATG+AGG 0.641239 5:+100995605 MsG0580029704.01.T01:CDS
ATGAAGGCACATCGGGATAG+CGG 0.641957 5:-100995223 None:intergenic
AGTTAATCAAATCAATGCTG+AGG 0.642012 5:+100991096 MsG0580029704.01.T01:CDS
AGACATCGCCGACCATGCAA+GGG 0.647513 5:+100992172 MsG0580029704.01.T01:CDS
TCTCTCCAATTAGAACAAGT+CGG 0.655912 5:+100995873 MsG0580029704.01.T01:CDS
ACACCTTTATAATAGTGTAG+AGG 0.656703 5:-100992607 None:intergenic
AGGCTGGCTATCCACAATGG+TGG 0.656981 5:-100990647 None:intergenic
CCTTGCACAACAGATTGGAA+AGG 0.664856 5:+100992747 MsG0580029704.01.T01:CDS
AATTATCTGATCCTTCAAGA+GGG 0.674032 5:+100992090 MsG0580029704.01.T01:CDS
AGTTGAGGTAACACGCAATG+TGG 0.705176 5:+100992142 MsG0580029704.01.T01:CDS
TCGGCCAATGAGACAAACAG+AGG 0.721905 5:+100993279 MsG0580029704.01.T01:CDS
ACTTGATTTGATCATCAACG+AGG 0.741147 5:-100996193 None:intergenic
TGACTGGTACTGGTACCATG+GGG 0.804843 5:-100994097 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAAATATATTTGTAG+CGG + Chr5:100990197-100990216 MsG0580029704.01.T01:intron 10.0%
!! AATTTGAAGAAATAAAAATA+AGG - Chr5:100993574-100993593 None:intergenic 10.0%
!!! ATGTTTTTTTTTTTTTTTTG+AGG - Chr5:100990281-100990300 None:intergenic 10.0%
!!! TAATAATTAAATATTGGTTT+AGG - Chr5:100992382-100992401 None:intergenic 10.0%
!!! TGATATACAATATAATATTT+TGG + Chr5:100990826-100990845 MsG0580029704.01.T01:intron 10.0%
!!! TGTTTTTTTTTTTTTTTTGA+GGG - Chr5:100990280-100990299 None:intergenic 10.0%
!! AAAATTTACTAAAAATGGTA+TGG - Chr5:100993656-100993675 None:intergenic 15.0%
!! ATAAAAGAAAAAACATTAGA+AGG - Chr5:100990945-100990964 None:intergenic 15.0%
!! ATTGTTAGTATTATATATGT+TGG + Chr5:100991590-100991609 MsG0580029704.01.T01:intron 15.0%
!! TAAAAGAAAAAACATTAGAA+GGG - Chr5:100990944-100990963 None:intergenic 15.0%
!! TAAATAAATGCAAAAAACAT+TGG - Chr5:100990232-100990251 None:intergenic 15.0%
!! TATTAATTTATATACACTGT+CGG + Chr5:100994547-100994566 MsG0580029704.01.T01:intron 15.0%
!! TTAATATTTACTCATTTGTT+CGG + Chr5:100993472-100993491 MsG0580029704.01.T01:intron 15.0%
!!! AATTTCACTTTTTTTTTAAG+GGG - Chr5:100991948-100991967 None:intergenic 15.0%
!!! ATATACTTTGTTATTTTGTT+TGG + Chr5:100994767-100994786 MsG0580029704.01.T01:intron 15.0%
!!! CAATTTCACTTTTTTTTTAA+GGG - Chr5:100991949-100991968 None:intergenic 15.0%
!!! TATACTTTGTTATTTTGTTT+GGG + Chr5:100994768-100994787 MsG0580029704.01.T01:intron 15.0%
!!! TTATTTTTATGAACATTAGT+AGG + Chr5:100990607-100990626 MsG0580029704.01.T01:intron 15.0%
!!! TTTTTCTTTCTCATATTAAT+TGG + Chr5:100993850-100993869 MsG0580029704.01.T01:intron 15.0%
!!! TTTTTTTAAATTGTCAATGT+TGG + Chr5:100991566-100991585 MsG0580029704.01.T01:intron 15.0%
!! AATATACACATAAAGAGTTA+TGG + Chr5:100992915-100992934 MsG0580029704.01.T01:intron 20.0%
!! ATAAACATCATGAATAGATT+CGG - Chr5:100990787-100990806 None:intergenic 20.0%
!! ATATAAATTAATAGCGTGTT+TGG - Chr5:100994540-100994559 None:intergenic 20.0%
!! ATCCAAAAATATATCTTATC+AGG - Chr5:100991513-100991532 None:intergenic 20.0%
!! ATCTTTAAATGTCATATTCT+TGG - Chr5:100992824-100992843 None:intergenic 20.0%
!! CAAATTGTATAATGTATACA+GGG + Chr5:100993588-100993607 MsG0580029704.01.T01:intron 20.0%
!! GTAATATGATTGAGAATATA+AGG - Chr5:100991689-100991708 None:intergenic 20.0%
!! TAAAAAAATTGTTCTCTATG+AGG - Chr5:100992999-100993018 None:intergenic 20.0%
!! TAAAATTTGAATGAGAAGAT+GGG - Chr5:100991436-100991455 None:intergenic 20.0%
!! TAATATTTACTCATTTGTTC+GGG + Chr5:100993473-100993492 MsG0580029704.01.T01:intron 20.0%
!! TATGACATTTAAAGATTTCA+AGG + Chr5:100992828-100992847 MsG0580029704.01.T01:CDS 20.0%
!! TATGTTTATACTGATAACTT+AGG + Chr5:100992708-100992727 MsG0580029704.01.T01:intron 20.0%
!! TCAAATTGTATAATGTATAC+AGG + Chr5:100993587-100993606 MsG0580029704.01.T01:intron 20.0%
!! TCCAAAAATATATCTTATCA+GGG - Chr5:100991512-100991531 None:intergenic 20.0%
!! TCTTTAAATGTCATATTCTT+GGG - Chr5:100992823-100992842 None:intergenic 20.0%
!! TTTAGCAAGGTTAAATAAAT+TGG + Chr5:100994323-100994342 MsG0580029704.01.T01:CDS 20.0%
!!! GAAAATAATGATTTTCCTAT+CGG - Chr5:100992969-100992988 None:intergenic 20.0%
!!! GCAATTTCACTTTTTTTTTA+AGG - Chr5:100991950-100991969 None:intergenic 20.0%
!!! GGTTTTTTGTATGATTATTT+TGG + Chr5:100993812-100993831 MsG0580029704.01.T01:intron 20.0%
!!! TCTTTTTGAGGTTTATTTAA+AGG + Chr5:100995278-100995297 MsG0580029704.01.T01:intron 20.0%
! AAAAAAATTAAAGGTAGCCA+AGG - Chr5:100993417-100993436 None:intergenic 25.0%
! AAAAAAGAGAATTGAAGTCA+TGG - Chr5:100991899-100991918 None:intergenic 25.0%
! AAAATAAGGTAGTCAAAGAT+AGG - Chr5:100993560-100993579 None:intergenic 25.0%
! AAAATTTGAATGAGAAGATG+GGG - Chr5:100991435-100991454 None:intergenic 25.0%
! AAACACATAGAATTAACTGT+TGG - Chr5:100993361-100993380 None:intergenic 25.0%
! AAATAAGGTAGTCAAAGATA+GGG - Chr5:100993559-100993578 None:intergenic 25.0%
! AACAAACTGAATACTGAATA+GGG - Chr5:100991140-100991159 None:intergenic 25.0%
! ACTTGAATTATCTGAAAACT+TGG - Chr5:100990558-100990577 None:intergenic 25.0%
! AGACATTACTAGTAATCAAA+TGG - Chr5:100990094-100990113 None:intergenic 25.0%
! AGTTAATGCAATTATTCACA+AGG - Chr5:100992877-100992896 None:intergenic 25.0%
! AGTTTATGAGAGAAAAATGT+GGG + Chr5:100991823-100991842 MsG0580029704.01.T01:intron 25.0%
! ATAGGTAATATGTAACTCAA+AGG + Chr5:100990342-100990361 MsG0580029704.01.T01:intron 25.0%
! ATTCTCCATGTGAATTTAAA+TGG - Chr5:100990688-100990707 None:intergenic 25.0%
! ATTGTCTTGAAATACTCATA+AGG - Chr5:100992422-100992441 None:intergenic 25.0%
! CAACAGAAATTAAAAGTTAG+TGG - Chr5:100992463-100992482 None:intergenic 25.0%
! CTTCACAATTTAAATGTTAC+CGG - Chr5:100993998-100994017 None:intergenic 25.0%
! GAAAATCAAGAAGCTATAAA+GGG - Chr5:100994465-100994484 None:intergenic 25.0%
! GACAAACTACGTTATTATTT+AGG + Chr5:100994067-100994086 MsG0580029704.01.T01:intron 25.0%
! GACATTACTAGTAATCAAAT+GGG - Chr5:100990093-100990112 None:intergenic 25.0%
! GCTTAAAAAAAAAACACTTC+TGG - Chr5:100994440-100994459 None:intergenic 25.0%
! GTAAAATTTGAATGAGAAGA+TGG - Chr5:100991437-100991456 None:intergenic 25.0%
! TAATATGGGTCTCAAAAAAA+GGG + Chr5:100993618-100993637 MsG0580029704.01.T01:intron 25.0%
! TAGGTAATATGTAACTCAAA+GGG + Chr5:100990343-100990362 MsG0580029704.01.T01:intron 25.0%
! TAGTTTATGAGAGAAAAATG+TGG + Chr5:100991822-100991841 MsG0580029704.01.T01:intron 25.0%
! TATGTGTATATTTGAGAAGA+TGG - Chr5:100992907-100992926 None:intergenic 25.0%
! TCTAAAGATTCTTCATCTTT+CGG - Chr5:100995438-100995457 None:intergenic 25.0%
! TGAAAATCAAGAAGCTATAA+AGG - Chr5:100994466-100994485 None:intergenic 25.0%
! TGACATGTTGAATAAAAGAA+GGG + Chr5:100991736-100991755 MsG0580029704.01.T01:intron 25.0%
! TGATACAGACCTATTAAAAA+AGG - Chr5:100993761-100993780 None:intergenic 25.0%
! TTGACATGTTGAATAAAAGA+AGG + Chr5:100991735-100991754 MsG0580029704.01.T01:intron 25.0%
! TTGGTTGAAAAATTGAAAGA+AGG + Chr5:100995783-100995802 MsG0580029704.01.T01:CDS 25.0%
!! AACAAACATTACTAGTTTCT+AGG - Chr5:100992647-100992666 None:intergenic 25.0%
!! ACAAACATTACTAGTTTCTA+GGG - Chr5:100992646-100992665 None:intergenic 25.0%
!! AGTGAAATTGCACATATTTT+TGG + Chr5:100991959-100991978 MsG0580029704.01.T01:intron 25.0%
!! ATCATTTTATAACAACGGTA+AGG - Chr5:100991163-100991182 None:intergenic 25.0%
!! ATGTAATTATTTTCCCAGAA+GGG + Chr5:100990975-100990994 MsG0580029704.01.T01:CDS 25.0%
!! CTTTTTCTTTTGTCATCTTT+AGG + Chr5:100994913-100994932 MsG0580029704.01.T01:intron 25.0%
!! GGTAGATCATTTTATAACAA+CGG - Chr5:100991168-100991187 None:intergenic 25.0%
!! GTGAAATTGCACATATTTTT+GGG + Chr5:100991960-100991979 MsG0580029704.01.T01:intron 25.0%
!! TAAAAGTACATGAACATGAT+TGG - Chr5:100990486-100990505 None:intergenic 25.0%
!! TCAAATGTATTTTCCTTCTA+TGG + Chr5:100994249-100994268 MsG0580029704.01.T01:intron 25.0%
!! TCCCTGATAAGATATATTTT+TGG + Chr5:100991508-100991527 MsG0580029704.01.T01:intron 25.0%
!! TGGACAAATTGTATTGTTTT+TGG + Chr5:100993958-100993977 MsG0580029704.01.T01:CDS 25.0%
!! TTAATATTTGTTGGTGTACA+AGG + Chr5:100994210-100994229 MsG0580029704.01.T01:intron 25.0%
!!! ATCTTTGCACCTTTTTTAAT+AGG + Chr5:100993749-100993768 MsG0580029704.01.T01:intron 25.0%
!!! ATTAGAGCTCTAAACTTATT+TGG - Chr5:100992282-100992301 None:intergenic 25.0%
!!! ATTGGTTTAGGAAATACTTT+TGG - Chr5:100992370-100992389 None:intergenic 25.0%
!!! GTGCTGATTTTAATATTTGT+TGG + Chr5:100994201-100994220 MsG0580029704.01.T01:intron 25.0%
!!! GTTTTTTCTTTTATCTGATC+AGG + Chr5:100990951-100990970 MsG0580029704.01.T01:intron 25.0%
!!! TTAAGGGATATTGCTTTTAA+AGG + Chr5:100995756-100995775 MsG0580029704.01.T01:CDS 25.0%
AAAATTAGTCAGCATAGACT+CGG + Chr5:100995578-100995597 MsG0580029704.01.T01:CDS 30.0%
AAATATATTTGTAGCGGTGT+CGG + Chr5:100990203-100990222 MsG0580029704.01.T01:intron 30.0%
AACCACAAGGATTTAATATG+AGG - Chr5:100993079-100993098 None:intergenic 30.0%
AACCTCAAAAAGAAAATACC+TGG - Chr5:100995271-100995290 None:intergenic 30.0%
AAGGACAAGAATACTCAAAA+CGG + Chr5:100995700-100995719 MsG0580029704.01.T01:CDS 30.0%
AATAAGGTAGTCAAAGATAG+GGG - Chr5:100993558-100993577 None:intergenic 30.0%
AATACATTTGATGTCAACTC+AGG - Chr5:100994240-100994259 None:intergenic 30.0%
AATGAACAAGAATGTGATTG+GGG + Chr5:100992041-100992060 MsG0580029704.01.T01:CDS 30.0%
AATTATCTGAAAACTTGGAG+AGG - Chr5:100990553-100990572 None:intergenic 30.0%
AATTATCTGATCCTTCAAGA+GGG + Chr5:100992090-100992109 MsG0580029704.01.T01:CDS 30.0%
ACACCTTTATAATAGTGTAG+AGG - Chr5:100992610-100992629 None:intergenic 30.0%
ACAGGATCACATTTAACATT+TGG - Chr5:100995030-100995049 None:intergenic 30.0%
ACATAAAGAGTTATGGAAGT+TGG + Chr5:100992922-100992941 MsG0580029704.01.T01:intron 30.0%
AGGTAATATGTAACTCAAAG+GGG + Chr5:100990344-100990363 MsG0580029704.01.T01:intron 30.0%
AGTATTATATATGTTGGCAG+TGG + Chr5:100991596-100991615 MsG0580029704.01.T01:intron 30.0%
AGTGTTAATTTCTTGTCAAC+AGG - Chr5:100995048-100995067 None:intergenic 30.0%
AGTTAATCAAATCAATGCTG+AGG + Chr5:100991096-100991115 MsG0580029704.01.T01:CDS 30.0%
ATAAGTCAATCTGGTAAACA+CGG + Chr5:100990370-100990389 MsG0580029704.01.T01:intron 30.0%
ATGTAGATTCTATCTATTGG+AGG + Chr5:100990862-100990881 MsG0580029704.01.T01:intron 30.0%
ATTAACACTTACAGAAAGCA+AGG + Chr5:100995059-100995078 MsG0580029704.01.T01:CDS 30.0%
ATTGCAAATAAAGTGCATCA+TGG + Chr5:100994841-100994860 MsG0580029704.01.T01:intron 30.0%
ATTGCGTTGAAGTTAACTTT+AGG - Chr5:100995816-100995835 None:intergenic 30.0%
ATTTAGTAGTGTCAACATGT+CGG + Chr5:100990247-100990266 MsG0580029704.01.T01:intron 30.0%
CAAAAATAAAGAAAACGCAG+AGG + Chr5:100992580-100992599 MsG0580029704.01.T01:CDS 30.0%
CAATGAACAAGAATGTGATT+GGG + Chr5:100992040-100992059 MsG0580029704.01.T01:CDS 30.0%
CACATATGATAAATACACAC+AGG - Chr5:100990919-100990938 None:intergenic 30.0%
CACATTCTTGTTCATTGAAT+CGG - Chr5:100992037-100992056 None:intergenic 30.0%
CAGATCATAGAGAAATTGAT+GGG - Chr5:100993895-100993914 None:intergenic 30.0%
CATAAAGAGTTATGGAAGTT+GGG + Chr5:100992923-100992942 MsG0580029704.01.T01:intron 30.0%
CATGTGAATTTAAATGGAGA+AGG - Chr5:100990682-100990701 None:intergenic 30.0%
CCAATAGATAGAATCTACAT+GGG - Chr5:100990862-100990881 None:intergenic 30.0%
CTAATATGGGTCTCAAAAAA+AGG + Chr5:100993617-100993636 MsG0580029704.01.T01:intron 30.0%
CTTCTCCATTTAAATTCACA+TGG + Chr5:100990680-100990699 MsG0580029704.01.T01:CDS 30.0%
GAAAGATGAAGAATCTTTAG+AGG + Chr5:100995437-100995456 MsG0580029704.01.T01:CDS 30.0%
GAACAAACTGAATACTGAAT+AGG - Chr5:100991141-100991160 None:intergenic 30.0%
GTATATGCAATAAATGCAAG+TGG + Chr5:100993791-100993810 MsG0580029704.01.T01:intron 30.0%
GTATTATATATGTTGGCAGT+GGG + Chr5:100991597-100991616 MsG0580029704.01.T01:intron 30.0%
GTTCAGATGTATTTGATGTT+GGG + Chr5:100990743-100990762 MsG0580029704.01.T01:CDS 30.0%
GTTTATACTGATAACTTAGG+TGG + Chr5:100992711-100992730 MsG0580029704.01.T01:intron 30.0%
TAAAAGTTAGTGGCAAACAT+AGG - Chr5:100992453-100992472 None:intergenic 30.0%
TATTATATATGTTGGCAGTG+GGG + Chr5:100991598-100991617 MsG0580029704.01.T01:intron 30.0%
TCAAAAAAAGGGTCTAAATG+TGG + Chr5:100993629-100993648 MsG0580029704.01.T01:intron 30.0%
TCAATGAACAAGAATGTGAT+TGG + Chr5:100992039-100992058 MsG0580029704.01.T01:CDS 30.0%
TCACCTCTACACTATTATAA+AGG + Chr5:100992604-100992623 MsG0580029704.01.T01:CDS 30.0%
TCAGATCATAGAGAAATTGA+TGG - Chr5:100993896-100993915 None:intergenic 30.0%
TCATAAACTACCAAAAGTCA+TGG - Chr5:100991812-100991831 None:intergenic 30.0%
TCCAATAGATAGAATCTACA+TGG - Chr5:100990863-100990882 None:intergenic 30.0%
TGAAGAGATTGAACTTTATG+AGG + Chr5:100994362-100994381 MsG0580029704.01.T01:CDS 30.0%
TGCACATATTTCATGTATGA+AGG - Chr5:100995242-100995261 None:intergenic 30.0%
TGTTCAGATGTATTTGATGT+TGG + Chr5:100990742-100990761 MsG0580029704.01.T01:CDS 30.0%
TTCAGATGTATTTGATGTTG+GGG + Chr5:100990744-100990763 MsG0580029704.01.T01:CDS 30.0%
TTCCTCATATTAAATCCTTG+TGG + Chr5:100993074-100993093 MsG0580029704.01.T01:intron 30.0%
TTGAGAATATAAGGATGACT+TGG - Chr5:100991680-100991699 None:intergenic 30.0%
TTGCATATGACTTACCATAA+GGG + Chr5:100994884-100994903 MsG0580029704.01.T01:intron 30.0%
TTTATTCTTATCCCTTTCCT+AGG + Chr5:100995344-100995363 MsG0580029704.01.T01:intron 30.0%
! ATCTTGAATCTCAGCAATTT+TGG - Chr5:100996117-100996136 None:intergenic 30.0%
! CATGTAATTATTTTCCCAGA+AGG + Chr5:100990974-100990993 MsG0580029704.01.T01:CDS 30.0%
! CTGGATCTTTTAATCTCTAT+GGG + Chr5:100994938-100994957 MsG0580029704.01.T01:intron 30.0%
! GAATTGAAAGATTTTCTTGG+AGG + Chr5:100990704-100990723 MsG0580029704.01.T01:CDS 30.0%
! GACAGAATGTTGAGATTTTA+AGG - Chr5:100995679-100995698 None:intergenic 30.0%
! GGAGAATTGAAAGATTTTCT+TGG + Chr5:100990701-100990720 MsG0580029704.01.T01:CDS 30.0%
! TAAAAGCATGATGCTTTAGT+TGG + Chr5:100993038-100993057 MsG0580029704.01.T01:intron 30.0%
! TAATAACGTAGTTTGTCAAC+AGG - Chr5:100994064-100994083 None:intergenic 30.0%
! TCAAAAGTGTAAAAACCACA+AGG - Chr5:100993092-100993111 None:intergenic 30.0%
! TCAAGGTATCATCATTAGTT+AGG + Chr5:100992845-100992864 MsG0580029704.01.T01:intron 30.0%
! TGAGTTCAATATTTTCTGTC+TGG - Chr5:100996018-100996037 None:intergenic 30.0%
! TGTAATTATTTTCCCAGAAG+GGG + Chr5:100990976-100990995 MsG0580029704.01.T01:CDS 30.0%
! TTCATGTACTTTTACATTGC+TGG + Chr5:100990492-100990511 MsG0580029704.01.T01:intron 30.0%
! TTTAGGAAATACTTTTGGTC+AGG - Chr5:100992365-100992384 None:intergenic 30.0%
! TTTTGTGCTTTTGTACTTTC+TGG - Chr5:100992565-100992584 None:intergenic 30.0%
!! AAGTGTTGAAGATCAAATTC+CGG + Chr5:100996220-100996239 MsG0580029704.01.T01:CDS 30.0%
!! TACCTGGCTTGATTTATTTT+GGG - Chr5:100992226-100992245 None:intergenic 30.0%
!! TATTGCTTTTAAAGGAGACT+TGG + Chr5:100995764-100995783 MsG0580029704.01.T01:CDS 30.0%
!!! CCAATAATTTTTTAACCTCG+CGG + Chr5:100991340-100991359 MsG0580029704.01.T01:intron 30.0%
!!! TCGTTATTTTTTTCCATCCT+TGG + Chr5:100993397-100993416 MsG0580029704.01.T01:intron 30.0%
!!! TTCTGTTGTACTTTTTCTGT+TGG + Chr5:100992475-100992494 MsG0580029704.01.T01:intron 30.0%
AAAGAGAATTGAAGTCATGG+TGG - Chr5:100991896-100991915 None:intergenic 35.0%
AAATCTCAACATTCTGTCCA+AGG + Chr5:100995681-100995700 MsG0580029704.01.T01:CDS 35.0%
AAATTAAAGGTAGCCAAGGA+TGG - Chr5:100993413-100993432 None:intergenic 35.0%
AACATCATGAATAGATTCGG+AGG - Chr5:100990784-100990803 None:intergenic 35.0%
AACCTTGCTAAAATTGCTGA+CGG - Chr5:100994315-100994334 None:intergenic 35.0%
AATATCTACTTACCCTTGCA+TGG - Chr5:100992187-100992206 None:intergenic 35.0%
AATTGTGTGTATTGTTGTGC+AGG + Chr5:100994990-100995009 MsG0580029704.01.T01:intron 35.0%
ACCATACATATCGTCCTATT+CGG + Chr5:100993260-100993279 MsG0580029704.01.T01:CDS 35.0%
AGCAACTTCTTCAGGAATTA+AGG + Chr5:100995739-100995758 MsG0580029704.01.T01:CDS 35.0%
AGGACAAGAATACTCAAAAC+GGG + Chr5:100995701-100995720 MsG0580029704.01.T01:CDS 35.0%
AGTTAACTTCAACGCAATCA+AGG + Chr5:100995818-100995837 MsG0580029704.01.T01:CDS 35.0%
ATAAAGTGCATCATGGTCTA+TGG + Chr5:100994848-100994867 MsG0580029704.01.T01:intron 35.0%
ATAAGGTAGTCAAAGATAGG+GGG - Chr5:100993557-100993576 None:intergenic 35.0%
ATACAGGGATGCATCTAATA+TGG + Chr5:100993603-100993622 MsG0580029704.01.T01:intron 35.0%
ATATTTCTTCTGCACATGCA+AGG - Chr5:100994751-100994770 None:intergenic 35.0%
ATGACTTACCATAAGGGAAA+GGG + Chr5:100994890-100994909 MsG0580029704.01.T01:intron 35.0%
ATTTGATGCTATGGTAGATG+AGG + Chr5:100995605-100995624 MsG0580029704.01.T01:CDS 35.0%
CAATCGTTTCTTCGACTATA+AGG - Chr5:100995476-100995495 None:intergenic 35.0%
CCCATGTAGATTCTATCTAT+TGG + Chr5:100990859-100990878 MsG0580029704.01.T01:intron 35.0%
CCGCGAGGTTAAAAAATTAT+TGG - Chr5:100991343-100991362 None:intergenic 35.0%
CCTTCAATGCTTCATTATCT+TGG - Chr5:100995992-100996011 None:intergenic 35.0%
CGGATGAATGATTTACGATA+CGG + Chr5:100990390-100990409 MsG0580029704.01.T01:intron 35.0%
CTATTCTGTAAAATCTGCAC+TGG + Chr5:100992499-100992518 MsG0580029704.01.T01:intron 35.0%
CTCATTCTGATTCAAATTGC+AGG + Chr5:100993934-100993953 MsG0580029704.01.T01:intron 35.0%
CTTGCATATGACTTACCATA+AGG + Chr5:100994883-100994902 MsG0580029704.01.T01:intron 35.0%
GAAACTCAATCTGAATTGGA+AGG + Chr5:100996242-100996261 MsG0580029704.01.T01:CDS 35.0%
GAATTATCTGATCCTTCAAG+AGG + Chr5:100992089-100992108 MsG0580029704.01.T01:CDS 35.0%
GATTCAGAAAATTTGCCCAA+CGG + Chr5:100991040-100991059 MsG0580029704.01.T01:CDS 35.0%
GATTTACGATACGGTTATGT+CGG + Chr5:100990399-100990418 MsG0580029704.01.T01:intron 35.0%
GCAACTTCTTCAGGAATTAA+GGG + Chr5:100995740-100995759 MsG0580029704.01.T01:CDS 35.0%
GCAAGGTTAAATAAATTGGC+TGG + Chr5:100994327-100994346 MsG0580029704.01.T01:CDS 35.0%
GGATCAGATAATTCATCAAG+AGG - Chr5:100992083-100992102 None:intergenic 35.0%
TAACTTAGTGAGCATCAACT+GGG - Chr5:100995096-100995115 None:intergenic 35.0%
TAATATGTCATGCTCTCTCT+TGG - Chr5:100994123-100994142 None:intergenic 35.0%
TACAGGGATGCATCTAATAT+GGG + Chr5:100993604-100993623 MsG0580029704.01.T01:intron 35.0%
TACATATTACCTATGCAGCA+TGG - Chr5:100990336-100990355 None:intergenic 35.0%
TATGACTTACCATAAGGGAA+AGG + Chr5:100994889-100994908 MsG0580029704.01.T01:intron 35.0%
TCAGATGTATTTGATGTTGG+GGG + Chr5:100990745-100990764 MsG0580029704.01.T01:CDS 35.0%
TCCAATTCAGATTGAGTTTC+CGG - Chr5:100996242-100996261 None:intergenic 35.0%
TCTATGTCTGAGAGACAAAT+AGG - Chr5:100995414-100995433 None:intergenic 35.0%
TCTCTCCAATTAGAACAAGT+CGG + Chr5:100995873-100995892 MsG0580029704.01.T01:CDS 35.0%
TGAAGCTCAACAGTCAAAAA+GGG + Chr5:100995509-100995528 MsG0580029704.01.T01:CDS 35.0%
TGCAAAACTACAAGAAGACA+GGG + Chr5:100996091-100996110 MsG0580029704.01.T01:CDS 35.0%
TTCTGATTCAAATTGCAGGT+TGG + Chr5:100993938-100993957 MsG0580029704.01.T01:intron 35.0%
TTGAAGCTCAACAGTCAAAA+AGG + Chr5:100995508-100995527 MsG0580029704.01.T01:CDS 35.0%
TTGCAAAACTACAAGAAGAC+AGG + Chr5:100996090-100996109 MsG0580029704.01.T01:CDS 35.0%
TTTCTTGGAGGAATGAGATA+AGG + Chr5:100990716-100990735 MsG0580029704.01.T01:CDS 35.0%
TTTGAACTCTTTCCAATACC+CGG + Chr5:100991916-100991935 MsG0580029704.01.T01:intron 35.0%
! ACTTGATTTGATCATCAACG+AGG - Chr5:100996196-100996215 None:intergenic 35.0%
! AGAAGAAAGACAACTGATTC+AGG + Chr5:100990045-100990064 MsG0580029704.01.T01:CDS 35.0%
! AGAATATAAGGATGACTTGG+CGG - Chr5:100991677-100991696 None:intergenic 35.0%
! AGTTTCTTGTTTCCTTGTTC+AGG + Chr5:100995386-100995405 MsG0580029704.01.T01:intron 35.0%
! ATATTTGTTGGTGTACAAGG+TGG + Chr5:100994213-100994232 MsG0580029704.01.T01:intron 35.0%
! GACCATTTGTCCATGTATTT+TGG + Chr5:100991010-100991029 MsG0580029704.01.T01:CDS 35.0%
! GCTGGATCTTTTAATCTCTA+TGG + Chr5:100994937-100994956 MsG0580029704.01.T01:intron 35.0%
! GTGTTTACCAGATTGACTTA+TGG - Chr5:100990371-100990390 None:intergenic 35.0%
! TCATCAAGAGGTATGAAGAA+TGG - Chr5:100992071-100992090 None:intergenic 35.0%
! TGCCAGGTATTTTCTTTTTG+AGG + Chr5:100995266-100995285 MsG0580029704.01.T01:intron 35.0%
! TTTCATGTATGAAGGCACAT+CGG - Chr5:100995234-100995253 None:intergenic 35.0%
! TTTGTACAATGGGTTTATGC+AGG + Chr5:100992523-100992542 MsG0580029704.01.T01:intron 35.0%
!! AACTTGCTGCAAAAGATGAT+AGG - Chr5:100992253-100992272 None:intergenic 35.0%
!! ATCGACAGAGTTTTATCAGA+AGG + Chr5:100995642-100995661 MsG0580029704.01.T01:CDS 35.0%
!! CCAAGATAATGAAGCATTGA+AGG + Chr5:100995989-100996008 MsG0580029704.01.T01:CDS 35.0%
!! CTACCTGGCTTGATTTATTT+TGG - Chr5:100992227-100992246 None:intergenic 35.0%
!! GTTTTGAGTATTCTTGTCCT+TGG - Chr5:100995701-100995720 None:intergenic 35.0%
!! TCGACAGAGTTTTATCAGAA+GGG + Chr5:100995643-100995662 MsG0580029704.01.T01:CDS 35.0%
!!! GCTGACTAATTTTGAAGTGT+TGG - Chr5:100995571-100995590 None:intergenic 35.0%
!!! TGTCGGCTTATTTTGGTATA+TGG + Chr5:100990416-100990435 MsG0580029704.01.T01:intron 35.0%
!!! TTTTGAAGTGTTGGATTTGC+TGG - Chr5:100995562-100995581 None:intergenic 35.0%
AATTCCTGAAGAAGTTGCTC+AGG - Chr5:100995738-100995757 None:intergenic 40.0%
ACCTTGCTAAAATTGCTGAC+GGG - Chr5:100994314-100994333 None:intergenic 40.0%
AGAAAAAGCCCTTTCCCTTA+TGG - Chr5:100994901-100994920 None:intergenic 40.0%
AGCCCAAAATAAATCAAGCC+AGG + Chr5:100992221-100992240 MsG0580029704.01.T01:intron 40.0%
AGTTAGTGGCAAACATAGGT+TGG - Chr5:100992449-100992468 None:intergenic 40.0%
ATCCTGAAAAAGAAGAGCTG+CGG + Chr5:100994162-100994181 MsG0580029704.01.T01:CDS 40.0%
ATCTGCAACGCCAAAATACA+TGG - Chr5:100991023-100991042 None:intergenic 40.0%
ATCTTGGTTAGTGCTCTTCT+TGG - Chr5:100995976-100995995 None:intergenic 40.0%
ATTCCTGAAGAAGTTGCTCA+GGG - Chr5:100995737-100995756 None:intergenic 40.0%
ATTTGAATGAGAAGATGGGG+AGG - Chr5:100991432-100991451 None:intergenic 40.0%
CAATTAATCACACGCAAGCT+TGG - Chr5:100994825-100994844 None:intergenic 40.0%
CACTCTTGTAGTTGAAGTTG+AGG + Chr5:100992127-100992146 MsG0580029704.01.T01:CDS 40.0%
CATGTTGAAATGAGCAATGC+TGG + Chr5:100991195-100991214 MsG0580029704.01.T01:intron 40.0%
CCATGAATGCAGTTGAACAA+TGG + Chr5:100995149-100995168 MsG0580029704.01.T01:intron 40.0%
CCATTGTTCAACTGCATTCA+TGG - Chr5:100995152-100995171 None:intergenic 40.0%
CGCCAAAATACATGGACAAA+TGG - Chr5:100991015-100991034 None:intergenic 40.0%
CTCATTTCAACATGCATGCA+TGG - Chr5:100991189-100991208 None:intergenic 40.0%
CTCGGAAGAATTTGATGCTA+TGG + Chr5:100995596-100995615 MsG0580029704.01.T01:CDS 40.0%
CTTTCAGAAAGCTTCTGCAA+TGG + Chr5:100995184-100995203 MsG0580029704.01.T01:CDS 40.0%
GAAAACTGCTCACTTTGTCA+GGG - Chr5:100992795-100992814 None:intergenic 40.0%
GAAATATGTGCACAATTGCC+AGG + Chr5:100995250-100995269 MsG0580029704.01.T01:CDS 40.0%
GACAAATAGGAACCTGAACA+AGG - Chr5:100995401-100995420 None:intergenic 40.0%
GCATAAATACTCCAACCGTT+GGG - Chr5:100991058-100991077 None:intergenic 40.0%
GGGAAAGAGTAATGTACAAG+TGG - Chr5:100991492-100991511 None:intergenic 40.0%
GTAACTTAGTGAGCATCAAC+TGG - Chr5:100995097-100995116 None:intergenic 40.0%
TCCAACATAACTGCCATAGA+AGG - Chr5:100994265-100994284 None:intergenic 40.0%
TCCGGAAACTCAATCTGAAT+TGG + Chr5:100996238-100996257 MsG0580029704.01.T01:CDS 40.0%
TCCTCACAATGTTGTTGAGA+AGG - Chr5:100995911-100995930 None:intergenic 40.0%
TCCTTCTATGGCAGTTATGT+TGG + Chr5:100994261-100994280 MsG0580029704.01.T01:intron 40.0%
TCTATGGCAGTTATGTTGGA+AGG + Chr5:100994265-100994284 MsG0580029704.01.T01:intron 40.0%
TCTCTTATGAGCTGCAAAAG+AGG - Chr5:100990028-100990047 None:intergenic 40.0%
TGCATAAATACTCCAACCGT+TGG - Chr5:100991059-100991078 None:intergenic 40.0%
TGCTAGAGAGTTTGACATAC+CGG + Chr5:100993198-100993217 MsG0580029704.01.T01:CDS 40.0%
TTAGCAAGTGTTTGCTTCTG+CGG + Chr5:100994404-100994423 MsG0580029704.01.T01:intron 40.0%
TTCAAGAGAAGCCTAGGAAA+GGG - Chr5:100995358-100995377 None:intergenic 40.0%
TTGATGTTGGGGGCTATAAA+TGG + Chr5:100990755-100990774 MsG0580029704.01.T01:CDS 40.0%
! ACAGATTCAGGTGTTGTGTT+GGG + Chr5:100989985-100990004 MsG0580029704.01.T01:CDS 40.0%
! ATTCCTGCGCTTTTGGTATT+GGG + Chr5:100993225-100993244 MsG0580029704.01.T01:CDS 40.0%
! ATTTGTTCGGGTTTGAATCC+AGG + Chr5:100993485-100993504 MsG0580029704.01.T01:intron 40.0%
! CAAGAGAGTTGAGTTGTGTT+TGG - Chr5:100996061-100996080 None:intergenic 40.0%
! CTTTTGTCATCTTTAGGTGC+TGG + Chr5:100994919-100994938 MsG0580029704.01.T01:intron 40.0%
! GACTTGTTCTAATTGGAGAG+AGG - Chr5:100995874-100995893 None:intergenic 40.0%
! GTAGAGGATACTTTTCCACT+GGG - Chr5:100991770-100991789 None:intergenic 40.0%
! TATTTAGGATTTACGCCCCA+TGG + Chr5:100994082-100994101 MsG0580029704.01.T01:intron 40.0%
! TTCATGTATGAAGGCACATC+GGG - Chr5:100995233-100995252 None:intergenic 40.0%
! TTGTGTTTGGTGGTTTGTGA+AGG - Chr5:100996048-100996067 None:intergenic 40.0%
!! CGACAGAGTTTTATCAGAAG+GGG + Chr5:100995644-100995663 MsG0580029704.01.T01:CDS 40.0%
!! TTTGTTTGTGAAGTGCCGAT+AGG + Chr5:100992951-100992970 MsG0580029704.01.T01:intron 40.0%
!!! ACGGTTATGTCGGCTTATTT+TGG + Chr5:100990409-100990428 MsG0580029704.01.T01:intron 40.0%
!!! CTGCACTGGTTTTGTACAAT+GGG + Chr5:100992513-100992532 MsG0580029704.01.T01:intron 40.0%
!!! TCTGCACTGGTTTTGTACAA+TGG + Chr5:100992512-100992531 MsG0580029704.01.T01:intron 40.0%
!!! TTTTTTTAAGGGGTGCCTTC+CGG - Chr5:100991938-100991957 None:intergenic 40.0%
AAAGATGATAGGTCGCTACC+TGG - Chr5:100992242-100992261 None:intergenic 45.0%
AACTCTTTCCAATACCCGGA+AGG + Chr5:100991920-100991939 MsG0580029704.01.T01:intron 45.0%
AAGAAGTTGCTCAGGGAGAT+TGG - Chr5:100995730-100995749 None:intergenic 45.0%
AAGGGGTCCATAAGTCAATC+TGG + Chr5:100990361-100990380 MsG0580029704.01.T01:intron 45.0%
ACCTGAAAATGCCACCATTG+TGG + Chr5:100990636-100990655 MsG0580029704.01.T01:CDS 45.0%
AGAAGTTGCTCAGGGAGATT+GGG - Chr5:100995729-100995748 None:intergenic 45.0%
AGCCAAGTGAAAAGAAGCTG+GGG - Chr5:100993513-100993532 None:intergenic 45.0%
AGTATCCTCTACCTTTACCG+CGG + Chr5:100991778-100991797 MsG0580029704.01.T01:intron 45.0%
AGTTGAGGTAACACGCAATG+TGG + Chr5:100992142-100992161 MsG0580029704.01.T01:CDS 45.0%
ATAGAGACCACTCCTGATGA+AGG + Chr5:100995534-100995553 MsG0580029704.01.T01:CDS 45.0%
ATTGCTGGACTAAGCATCTG+CGG + Chr5:100990507-100990526 MsG0580029704.01.T01:intron 45.0%
CAGAAAATTTGCCCAACGGT+TGG + Chr5:100991044-100991063 MsG0580029704.01.T01:CDS 45.0%
CCAAGAAGTCTGCATGATTG+TGG + Chr5:100991298-100991317 MsG0580029704.01.T01:intron 45.0%
CCACAATCATGCAGACTTCT+TGG - Chr5:100991301-100991320 None:intergenic 45.0%
CCTTGCACAACAGATTGGAA+AGG + Chr5:100992747-100992766 MsG0580029704.01.T01:CDS 45.0%
CCTTTCCAATCTGTTGTGCA+AGG - Chr5:100992750-100992769 None:intergenic 45.0%
CGAAAACTGCTCACTTTGTC+AGG - Chr5:100992796-100992815 None:intergenic 45.0%
GAAGACCTTGCACAACAGAT+TGG + Chr5:100992742-100992761 MsG0580029704.01.T01:CDS 45.0%
GAAGTCTGCATGATTGTGGT+AGG + Chr5:100991302-100991321 MsG0580029704.01.T01:intron 45.0%
GAGCCAAGTGAAAAGAAGCT+GGG - Chr5:100993514-100993533 None:intergenic 45.0%
GATGTGTCAAGTGTTCGTGT+CGG + Chr5:100990307-100990326 MsG0580029704.01.T01:intron 45.0%
GCCGAATAGGACGATATGTA+TGG - Chr5:100993264-100993283 None:intergenic 45.0%
GCCTTCTCAACAACATTGTG+AGG + Chr5:100995907-100995926 MsG0580029704.01.T01:CDS 45.0%
GCTTCCTCTGTTTGTCTCAT+TGG - Chr5:100993286-100993305 None:intergenic 45.0%
GTAGTCAAAGATAGGGGGTT+GGG - Chr5:100993552-100993571 None:intergenic 45.0%
GTTCAAGAGAAGCCTAGGAA+AGG - Chr5:100995359-100995378 None:intergenic 45.0%
GTTCAGTTCAAGAGAAGCCT+AGG - Chr5:100995364-100995383 None:intergenic 45.0%
GTTTGTCTCATTGGCCGAAT+AGG - Chr5:100993277-100993296 None:intergenic 45.0%
TCTACTTACCCTTGCATGGT+CGG - Chr5:100992183-100992202 None:intergenic 45.0%
TGAGCCAAGTGAAAAGAAGC+TGG - Chr5:100993515-100993534 None:intergenic 45.0%
TGCAGACTTCTTGGAGAAAG+TGG - Chr5:100991292-100991311 None:intergenic 45.0%
TTCACAACATGCCCTCTTGA+AGG - Chr5:100992104-100992123 None:intergenic 45.0%
TTGTTTGGGTCAAGCAGTCA+TGG + Chr5:100994782-100994801 MsG0580029704.01.T01:intron 45.0%
TTTCACCGTAGAATGCAAGC+TGG + Chr5:100994481-100994500 MsG0580029704.01.T01:intron 45.0%
TTTGATCATCAACGAGGTGC+TGG - Chr5:100996190-100996209 None:intergenic 45.0%
! ACAATGGGTTTATGCAGGAG+AGG + Chr5:100992528-100992547 MsG0580029704.01.T01:intron 45.0%
! ACCTCGCGGAAAAATGCTTT+TGG + Chr5:100991354-100991373 MsG0580029704.01.T01:intron 45.0%
! GACAGATTCAGGTGTTGTGT+TGG + Chr5:100989984-100990003 MsG0580029704.01.T01:CDS 45.0%
! GAGAGTTGAGTTGTGTTTGG+TGG - Chr5:100996058-100996077 None:intergenic 45.0%
! GATTCCTGCGCTTTTGGTAT+TGG + Chr5:100993224-100993243 MsG0580029704.01.T01:CDS 45.0%
! GGGAAACTCACCATGACTTT+TGG + Chr5:100991799-100991818 MsG0580029704.01.T01:intron 45.0%
! GGTAGAGGATACTTTTCCAC+TGG - Chr5:100991771-100991790 None:intergenic 45.0%
! TACCGCAGCTCTTCTTTTTC+AGG - Chr5:100994167-100994186 None:intergenic 45.0%
! TCCACAATGGTGGCATTTTC+AGG - Chr5:100990640-100990659 None:intergenic 45.0%
! TGGTGGTGACTACACAAAAG+TGG - Chr5:100991879-100991898 None:intergenic 45.0%
!! ACCCGTCAGCAATTTTAGCA+AGG + Chr5:100994310-100994329 MsG0580029704.01.T01:CDS 45.0%
!! CAGCACCGACTTGTTCTAAT+TGG - Chr5:100995881-100995900 None:intergenic 45.0%
!! GATTTGCTGGTACCTTCATC+AGG - Chr5:100995549-100995568 None:intergenic 45.0%
!!! ACCAAAAGCATTTTTCCGCG+AGG - Chr5:100991358-100991377 None:intergenic 45.0%
!!! ATGGTGGCATTTTCAGGTTG+AGG - Chr5:100990634-100990653 None:intergenic 45.0%
!!! TTTTTTAAGGGGTGCCTTCC+GGG - Chr5:100991937-100991956 None:intergenic 45.0%
!! AGAAATTAATAATTAAATAT+TGG - Chr5:100992388-100992407 None:intergenic 5.0%
!! TATTAAAAATTTACTAAAAA+TGG - Chr5:100993661-100993680 None:intergenic 5.0%
!! TCATTAAAAAAAAAAATTAA+AGG - Chr5:100993426-100993445 None:intergenic 5.0%
!!! TGATTTTATAATATAAAAAA+AGG - Chr5:100993701-100993720 None:intergenic 5.0%
AAGTCATGGTGAGTTTCCCG+CGG - Chr5:100991798-100991817 None:intergenic 50.0%
AATGGAGAAGGATCCTTGCC+AGG - Chr5:100990670-100990689 None:intergenic 50.0%
ACCAGCCAGCTTGCATTCTA+CGG - Chr5:100994489-100994508 None:intergenic 50.0%
AGAAGGGTCTAACTACCCAG+TGG + Chr5:100991752-100991771 MsG0580029704.01.T01:intron 50.0%
AGAGAGTTTGACATACCGGC+TGG + Chr5:100993202-100993221 MsG0580029704.01.T01:CDS 50.0%
AGGGAGTGATAAGGGGTCAA+GGG - Chr5:100991629-100991648 None:intergenic 50.0%
AGTGATAAGGAGGTCGGCTA+GGG - Chr5:100991648-100991667 None:intergenic 50.0%
CAAGTGTTTGCTTCTGCGGT+AGG + Chr5:100994408-100994427 MsG0580029704.01.T01:intron 50.0%
CCATCACATTGTCCCCTTCT+GGG - Chr5:100990991-100991010 None:intergenic 50.0%
CTAGGGAGTGATAAGGAGGT+CGG - Chr5:100991654-100991673 None:intergenic 50.0%
GAATGAGAAGATGGGGAGGT+AGG - Chr5:100991428-100991447 None:intergenic 50.0%
GCCAAGTGAAAAGAAGCTGG+GGG - Chr5:100993512-100993531 None:intergenic 50.0%
GCTGAGGACTCTGTGACAAA+AGG + Chr5:100991112-100991131 MsG0580029704.01.T01:CDS 50.0%
GGTAGTCAAAGATAGGGGGT+TGG - Chr5:100993553-100993572 None:intergenic 50.0%
GTATCCTCTACCTTTACCGC+GGG + Chr5:100991779-100991798 MsG0580029704.01.T01:intron 50.0%
GTGTTGGGTCTGTGTTGTGT+TGG + Chr5:100990000-100990019 MsG0580029704.01.T01:CDS 50.0%
TAGGGAGTGATAAGGGGTCA+AGG - Chr5:100991630-100991649 None:intergenic 50.0%
TCCATCACATTGTCCCCTTC+TGG - Chr5:100990992-100991011 None:intergenic 50.0%
TCGGCCAATGAGACAAACAG+AGG + Chr5:100993279-100993298 MsG0580029704.01.T01:CDS 50.0%
TCTCCCTGAGCAACTTCTTC+AGG + Chr5:100995731-100995750 MsG0580029704.01.T01:CDS 50.0%
TTGCTGGACTAAGCATCTGC+GGG + Chr5:100990508-100990527 MsG0580029704.01.T01:intron 50.0%
! ACCCCCAGCTTCTTTTCACT+TGG + Chr5:100993508-100993527 MsG0580029704.01.T01:intron 50.0%
! ATAAGGATGACTTGGCGGCT+AGG - Chr5:100991672-100991691 None:intergenic 50.0%
! ATGAAGGCACATCGGGATAG+CGG - Chr5:100995226-100995245 None:intergenic 50.0%
! TAAGGATGACTTGGCGGCTA+GGG - Chr5:100991671-100991690 None:intergenic 50.0%
! TCATGCTCTCTCTTGGTGAC+TGG - Chr5:100994116-100994135 None:intergenic 50.0%
! TCTCTCTTGGTGACTGGTAC+TGG - Chr5:100994110-100994129 None:intergenic 50.0%
! TTGCCCAATACCAAAAGCGC+AGG - Chr5:100993231-100993250 None:intergenic 50.0%
!! GTGACTGGTACTGGTACCAT+GGG - Chr5:100994101-100994120 None:intergenic 50.0%
!! TGACTGGTACTGGTACCATG+GGG - Chr5:100994100-100994119 None:intergenic 50.0%
!! TGCGCTTTTGGTATTGGGCA+AGG + Chr5:100993230-100993249 MsG0580029704.01.T01:CDS 50.0%
AAGACATCGCCGACCATGCA+AGG + Chr5:100992171-100992190 MsG0580029704.01.T01:CDS 55.0%
ACCATTGTGGATAGCCAGCC+TGG + Chr5:100990649-100990668 MsG0580029704.01.T01:CDS 55.0%
ACCGTAGAATGCAAGCTGGC+TGG + Chr5:100994485-100994504 MsG0580029704.01.T01:intron 55.0%
AGACATCGCCGACCATGCAA+GGG + Chr5:100992172-100992191 MsG0580029704.01.T01:CDS 55.0%
AGGTCGGCTAGGGAGTGATA+AGG - Chr5:100991638-100991657 None:intergenic 55.0%
CCCAGAAGGGGACAATGTGA+TGG + Chr5:100990988-100991007 MsG0580029704.01.T01:CDS 55.0%
GAGTGATAAGGAGGTCGGCT+AGG - Chr5:100991649-100991668 None:intergenic 55.0%
GCTGGTACCTTCATCAGGAG+TGG - Chr5:100995544-100995563 None:intergenic 55.0%
GGTCGGCTAGGGAGTGATAA+GGG - Chr5:100991637-100991656 None:intergenic 55.0%
GTCAAAGATAGGGGGTTGGG+TGG - Chr5:100993549-100993568 None:intergenic 55.0%
GTCGGCTAGGGAGTGATAAG+GGG - Chr5:100991636-100991655 None:intergenic 55.0%
GTTTCCCGCGGTAAAGGTAG+AGG - Chr5:100991786-100991805 None:intergenic 55.0%
TGAAAAGAAGCTGGGGGTCC+TGG - Chr5:100993506-100993525 None:intergenic 55.0%
TGGTGAGTTTCCCGCGGTAA+AGG - Chr5:100991792-100991811 None:intergenic 55.0%
TGTCGGAGTCCATGCTGCAT+AGG + Chr5:100990324-100990343 MsG0580029704.01.T01:intron 55.0%
TTGGCGGCTAGGGAGTGATA+AGG - Chr5:100991661-100991680 None:intergenic 55.0%
! AGGCTGGCTATCCACAATGG+TGG - Chr5:100990650-100990669 None:intergenic 55.0%
! CAAAAGCGCAGGAATCCAGC+CGG - Chr5:100993220-100993239 None:intergenic 55.0%
!! GGTGACTGGTACTGGTACCA+TGG - Chr5:100994102-100994121 None:intergenic 55.0%
AAGATGGGGAGGTAGGCACG+TGG - Chr5:100991421-100991440 None:intergenic 60.0%
GAGAAGGATCCTTGCCAGGC+TGG - Chr5:100990666-100990685 None:intergenic 60.0%
GCGACTGCGGTGGATAGATG+TGG + Chr5:100994512-100994531 MsG0580029704.01.T01:intron 60.0%
GCGGCTAGGGAGTGATAAGG+AGG - Chr5:100991658-100991677 None:intergenic 60.0%
TAGGGGGTTGGGTGGCTCAA+CGG - Chr5:100993541-100993560 None:intergenic 60.0%
TGTGGATAGCCAGCCTGGCA+AGG + Chr5:100990654-100990673 MsG0580029704.01.T01:CDS 60.0%
! CGGCTGGATTCCTGCGCTTT+TGG + Chr5:100993218-100993237 MsG0580029704.01.T01:CDS 60.0%
! GCCAGGCTGGCTATCCACAA+TGG - Chr5:100990653-100990672 None:intergenic 60.0%
!! AAGGGGTGCCTTCCGGGTAT+TGG - Chr5:100991931-100991950 None:intergenic 60.0%
AGGGGGTTGGGTGGCTCAAC+GGG - Chr5:100993540-100993559 None:intergenic 65.0%
! GCTGGCTGGTCGCGCGACTG+CGG + Chr5:100994499-100994518 MsG0580029704.01.T01:intron 75.0%
!! GGCTGGTCGCGCGACTGCGG+TGG + Chr5:100994502-100994521 MsG0580029704.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr5 gene 100989982 100996310 100989982 ID=MsG0580029704.01;Name=MsG0580029704.01
Chr5 mRNA 100989982 100996310 100989982 ID=MsG0580029704.01.T01;Parent=MsG0580029704.01;Name=MsG0580029704.01.T01;_AED=0.15;_eAED=0.16;_QI=0|0|0|1|0.91|0.84|13|0|739
Chr5 exon 100989982 100990066 100989982 ID=MsG0580029704.01.T01:exon:36658;Parent=MsG0580029704.01.T01
Chr5 exon 100990626 100990776 100990626 ID=MsG0580029704.01.T01:exon:36659;Parent=MsG0580029704.01.T01
Chr5 exon 100990973 100991133 100990973 ID=MsG0580029704.01.T01:exon:36660;Parent=MsG0580029704.01.T01
Chr5 exon 100992024 100992193 100992024 ID=MsG0580029704.01.T01:exon:36661;Parent=MsG0580029704.01.T01
Chr5 exon 100992545 100992625 100992545 ID=MsG0580029704.01.T01:exon:36662;Parent=MsG0580029704.01.T01
Chr5 exon 100992730 100992849 100992730 ID=MsG0580029704.01.T01:exon:36663;Parent=MsG0580029704.01.T01
Chr5 exon 100993190 100993312 100993190 ID=MsG0580029704.01.T01:exon:36664;Parent=MsG0580029704.01.T01
Chr5 exon 100993956 100993997 100993956 ID=MsG0580029704.01.T01:exon:36665;Parent=MsG0580029704.01.T01
Chr5 exon 100994089 100994183 100994089 ID=MsG0580029704.01.T01:exon:36666;Parent=MsG0580029704.01.T01
Chr5 exon 100994275 100994383 100994275 ID=MsG0580029704.01.T01:exon:36667;Parent=MsG0580029704.01.T01
Chr5 exon 100995012 100995080 100995012 ID=MsG0580029704.01.T01:exon:36668;Parent=MsG0580029704.01.T01
Chr5 exon 100995161 100995271 100995161 ID=MsG0580029704.01.T01:exon:36669;Parent=MsG0580029704.01.T01
Chr5 exon 100995408 100996310 100995408 ID=MsG0580029704.01.T01:exon:36670;Parent=MsG0580029704.01.T01
Chr5 CDS 100989982 100990066 100989982 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Chr5 CDS 100990626 100990776 100990626 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Chr5 CDS 100990973 100991133 100990973 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Chr5 CDS 100992024 100992193 100992024 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Chr5 CDS 100992545 100992625 100992545 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Chr5 CDS 100992730 100992849 100992730 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Chr5 CDS 100993190 100993312 100993190 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Chr5 CDS 100993956 100993997 100993956 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Chr5 CDS 100994089 100994183 100994089 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Chr5 CDS 100994275 100994383 100994275 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Chr5 CDS 100995012 100995080 100995012 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Chr5 CDS 100995161 100995271 100995161 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Chr5 CDS 100995408 100996310 100995408 ID=MsG0580029704.01.T01:cds;Parent=MsG0580029704.01.T01
Gene Sequence

>MsG0580029704.01.T01

ATGACAGATTCAGGTGTTGTGTTGGGTCTGTGTTGTGTTGGTACCTCTTTTGCAGCTCATAAGAGAAGAAAGACAACTGATTCAGTAGGTCCTCAACCTGAAAATGCCACCATTGTGGATAGCCAGCCTGGCAAGGATCCTTCTCCATTTAAATTCACATGGAGAATTGAAAGATTTTCTTGGAGGAATGAGATAAGGCTCTGTTCAGATGTATTTGATGTTGGGGGCTATAAATGGCATGTAATTATTTTCCCAGAAGGGGACAATGTGATGGACCATTTGTCCATGTATTTTGGCGTTGCAGATTCAGAAAATTTGCCCAACGGTTGGAGTATTTATGCACAGTTTAGCATGTCATTAGTTAATCAAATCAATGCTGAGGACTCTGTGACAAAAGACTTGCAGCACCGATTCAATGAACAAGAATGTGATTGGGGCGAGCCATTCTTCATACCTCTTGATGAATTATCTGATCCTTCAAGAGGGCATGTTGTGAATAACACTCTTGTAGTTGAAGTTGAGGTAACACGCAATGTGGATGAGAAAGACATCGCCGACCATGCAAGGGAGAGGTTGAAGAAAGACCAGAAAGTACAAAAGCACAAAAATAAAGAAAACGCAGAGGCTCACCTCTACACTATTATAAAGGTGGTACGAGATGAAGACCTTGCACAACAGATTGGAAAGGATATATATTTTGATCTTGTTGACCCTGACAAAGTGAGCAGTTTTCGTGTTCCCAAGAATATGACATTTAAAGATTTCAAGAAATTGCTTGCTAGAGAGTTTGACATACCGGCTGGATTCCTGCGCTTTTGGTATTGGGCAAGGAGTCAAAACCATACATATCGTCCTATTCGGCCAATGAGACAAACAGAGGAAGCAAGAAGCGTTGGACAAATTGTATTGTTTTTGGAAGTGGAGCGTGGACCGGATTTACGCCCCATGGTACCAGTACCAGTCACCAAGAGAGAGCATGACATATTACTTTTTTTCAAGTTATATGATCCTGAAAAAGAAGAGCTGCGTTATGTTGGAAGGCTCTTTGTTAACTGTTATAGTAACCCGTCAGCAATTTTAGCAAGGTTAAATAAATTGGCTGGTTATGATCTTGATGAAGAGATTGAACTTTATGAGGAAATTGAGTTTGAACCAAATGTTAAATGTGATCCTGTTGACAAGAAATTAACACTTACAGAAAGCAAGTTGAACAATGGTGCTATTATATGCTTTCAGAAAGCTTCTGCAATGGATAACGAGAAACATTTCCGCTATCCCGATGTGCCTTCATACATGAAATATGTGCACAATTGCCAGGTTCCTATTTGTCTCTCAGACATAGAACCGAAAGATGAAGAATCTTTAGAGGAGCAAAACGAAAACCTTATAGTCGAAGAAACGATTGTTGATAAAAACATTGAAGCTCAACAGTCAAAAAGGGAAATAGAGACCACTCCTGATGAAGGTACCAGCAAATCCAACACTTCAAAATTAGTCAGCATAGACTCGGAAGAATTTGATGCTATGGTAGATGAGGATGTCATTGCTGCTATCGACAGAGTTTTATCAGAAGGGGTTACTCTTTCCTTAAAATCTCAACATTCTGTCCAAGGACAAGAATACTCAAAACGGGATCCCAATCTCCCTGAGCAACTTCTTCAGGAATTAAGGGATATTGCTTTTAAAGGAGACTTGGTTGAAAAATTGAAAGAAGGTCTCACTCCTAAAGTTAACTTCAACGCAATCAAGGAAAAAATTGACGCTAATGCTGATGCGTTTTCCTCTCTCCAATTAGAACAAGTCGGTGCTGTTGTTAGCCTTCTCAACAACATTGTGAGGATGCTTGAAAAAATTGAAAATTTGAAAAAAGAGCGAGACTTAGCCAAGAAGAGCACTAACCAAGATAATGAAGCATTGAAGGAAACCAGACAGAAAATATTGAACTCAATGACTTCCTTCACAAACCACCAAACACAACTCAACTCTCTTGATGCTCAGATTGCAAAACTACAAGAAGACAGGGCCAAAATTGCTGAGATTCAAGATCAAGAGAAAGATAAGATTACATCTTTGAATAAAGATGTTAAGTCAATTTTCCAGCACCTCGTTGATGATCAAATCAAGTTGAAAAGTGTTGAAGATCAAATTCCGGAAACTCAATCTGAATTGGAAGGTTATGAGAAGCTCTTTCAAATCTTCAAGAAAATCCCTCCATTTTGA

Protein sequence

>MsG0580029704.01.T01

MTDSGVVLGLCCVGTSFAAHKRRKTTDSVGPQPENATIVDSQPGKDPSPFKFTWRIERFSWRNEIRLCSDVFDVGGYKWHVIIFPEGDNVMDHLSMYFGVADSENLPNGWSIYAQFSMSLVNQINAEDSVTKDLQHRFNEQECDWGEPFFIPLDELSDPSRGHVVNNTLVVEVEVTRNVDEKDIADHARERLKKDQKVQKHKNKENAEAHLYTIIKVVRDEDLAQQIGKDIYFDLVDPDKVSSFRVPKNMTFKDFKKLLAREFDIPAGFLRFWYWARSQNHTYRPIRPMRQTEEARSVGQIVLFLEVERGPDLRPMVPVPVTKREHDILLFFKLYDPEKEELRYVGRLFVNCYSNPSAILARLNKLAGYDLDEEIELYEEIEFEPNVKCDPVDKKLTLTESKLNNGAIICFQKASAMDNEKHFRYPDVPSYMKYVHNCQVPICLSDIEPKDEESLEEQNENLIVEETIVDKNIEAQQSKREIETTPDEGTSKSNTSKLVSIDSEEFDAMVDEDVIAAIDRVLSEGVTLSLKSQHSVQGQEYSKRDPNLPEQLLQELRDIAFKGDLVEKLKEGLTPKVNFNAIKEKIDANADAFSSLQLEQVGAVVSLLNNIVRMLEKIENLKKERDLAKKSTNQDNEALKETRQKILNSMTSFTNHQTQLNSLDAQIAKLQEDRAKIAEIQDQEKDKITSLNKDVKSIFQHLVDDQIKLKSVEDQIPETQSELEGYEKLFQIFKKIPPF*