AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023873.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023873.01.T01 MTR_8g103950 76.617 201 15 3 1 172 1 198 4.83e-94 284
MsG0480023873.01.T01 MTR_8g103950 76.617 201 15 3 1 172 1 198 5.21e-92 281
MsG0480023873.01.T02 MTR_8g103950 80.952 231 6 1 4 196 238 468 2.31e-115 343
MsG0480023873.01.T02 MTR_8g103950 80.952 231 6 1 4 196 238 468 1.95e-113 342
MsG0480023873.01.T02 MTR_8g103950 60.169 118 35 4 178 288 571 683 6.18e-36 136
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023873.01.T01 AT3G18480 88.321 137 15 1 36 172 72 207 3.67e-79 248
MsG0480023873.01.T02 AT3G18480 57.456 228 59 1 4 193 247 474 1.78e-71 233
MsG0480023873.01.T02 AT3G18480 71.622 74 16 2 218 288 618 689 1.04e-27 112

Find 98 sgRNAs with CRISPR-Local

Find 527 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCCGTCGTCTCCGCTTTC+TGG 0.108455 4:-90713796 MsG0480023873.01.T01:CDS
ATCGATCTACCAAACCATTC+TGG 0.247885 4:+90713993 None:intergenic
TTTCACATTAACAGAAAATA+AGG 0.259071 4:-90706575 MsG0480023873.01.T01:intron
AAGGCAGTTGAAGGAGAAAA+TGG 0.271828 4:-90706556 MsG0480023873.01.T01:three_prime_UTR
CGAGCACAAACAATGCTTCT+TGG 0.272686 4:-90710953 MsG0480023873.01.T01:three_prime_UTR
CATTCATCGGTAACAGAAAA+TGG 0.290925 4:-90713863 MsG0480023873.01.T01:exon
AAGATACAAGGATTGGATTC+AGG 0.297318 4:-90705594 MsG0480023873.01.T01:three_prime_UTR
TGCCTTGCTTAAGGGGTATC+AGG 0.303133 4:-90712900 MsG0480023873.01.T01:CDS
TTGTTTAATGCCTTGCTTAA+GGG 0.370199 4:-90712908 MsG0480023873.01.T01:CDS
ACAAACAATGCTTCTTGGTT+TGG 0.373165 4:-90710948 MsG0480023873.01.T01:three_prime_UTR
TTGAGCTTGATCTTGATCTA+AGG 0.373315 4:+90706769 None:intergenic
ATGTTGAGAAAGTGGTTTCC+AGG 0.374594 4:-90706455 MsG0480023873.01.T01:three_prime_UTR
AACTTCATCCATCAGGAGAT+TGG 0.381423 4:+90710979 None:intergenic
TTTGTTTAATGCCTTGCTTA+AGG 0.387765 4:-90712909 MsG0480023873.01.T01:CDS
CTTTCTCAACATTATAGTCT+TGG 0.389435 4:+90706466 None:intergenic
AGGCAGTTGAAGGAGAAAAT+GGG 0.412349 4:-90706555 MsG0480023873.01.T01:three_prime_UTR
GCAGTCAGAGAGATCGATTT+AGG 0.415746 4:-90706732 MsG0480023873.01.T01:three_prime_UTR
TCGATCTACCAAACCATTCT+GGG 0.426641 4:+90713994 None:intergenic
AGACTATAATGTTGAGAAAG+TGG 0.435617 4:-90706463 MsG0480023873.01.T01:three_prime_UTR
CTCTTCAAGTCTTCGTATTG+TGG 0.446914 4:+90711676 None:intergenic
CTCGTTCAACTTCATCCATC+AGG 0.450947 4:+90710972 None:intergenic
AGAGAAAGTAAAAGAAATTG+TGG 0.451660 4:-90711526 MsG0480023873.01.T01:CDS
ACATTAGAAATTTAAAAGAA+AGG 0.456285 4:-90711465 MsG0480023873.01.T01:exon
ATTCAATTGAGGCTGAAGAC+TGG 0.460183 4:-90707857 MsG0480023873.01.T01:three_prime_UTR
AGATACAAGGATTGGATTCA+GGG 0.462856 4:-90705593 MsG0480023873.01.T01:three_prime_UTR
TTTCTTTAGCACTCTGCAGC+TGG 0.464259 4:+90711279 None:intergenic
AAAGCGGAGACGACGGAGAT+CGG 0.467188 4:+90713800 None:intergenic
TGCTCATCTCCTCCCACTTG+TGG 0.469739 4:+90707827 None:intergenic
GTCGTCTCCGCTTTCTGGAA+AGG 0.473696 4:-90713791 MsG0480023873.01.T01:intron
GCAAGAGCTGGATAAGGATC+TGG 0.474947 4:+90712797 None:intergenic
TTTGAACTCCGTGCTCAGTC+TGG 0.477470 4:-90711210 MsG0480023873.01.T01:intron
GAGATCAAAGATACAAGGAT+TGG 0.478115 4:-90705601 MsG0480023873.01.T01:three_prime_UTR
GAGCACGGAGTTCAAACAAC+TGG 0.486238 4:+90711217 None:intergenic
ACAGAAAATAAGGCAGTTGA+AGG 0.486875 4:-90706565 MsG0480023873.01.T01:intron
AACTCACTTGAAGAATCAAC+AGG 0.495755 4:-90711699 MsG0480023873.01.T01:CDS
CGCTACGAGATTCACCAAAT+CGG 0.496099 4:+90713934 None:intergenic
GCAGATAATGTTAACTGTAC+GGG 0.497501 4:-90706503 MsG0480023873.01.T01:three_prime_UTR
TGTTTAATGCCTTGCTTAAG+GGG 0.498851 4:-90712907 MsG0480023873.01.T01:CDS
AGCAGATAATGTTAACTGTA+CGG 0.500161 4:-90706504 MsG0480023873.01.T01:three_prime_UTR
AGATCGATTTAGGACACGCT+TGG 0.502366 4:-90706722 MsG0480023873.01.T01:three_prime_UTR
AAACAAACTTGACTTATCCT+CGG 0.505879 4:+90712925 None:intergenic
AGTATTTGTTATTCATTCAT+CGG 0.507021 4:-90713876 MsG0480023873.01.T01:five_prime_UTR
CCGAGCTAGAATCTGAGAAC+CGG 0.509206 4:-90711760 MsG0480023873.01.T01:CDS
ACTGAGGCAAGAGCTGGATA+AGG 0.510141 4:+90712791 None:intergenic
GTATGCAGAAGATCTTGAAA+TGG 0.512953 4:-90706322 MsG0480023873.01.T01:three_prime_UTR
AACAAACTTGACTTATCCTC+GGG 0.514878 4:+90712926 None:intergenic
TTCAATTGAGGCTGAAGACT+GGG 0.516424 4:-90707856 MsG0480023873.01.T01:three_prime_UTR
TCCCTCTCCGATCCACTTGG+CGG 0.520914 4:+90713835 None:intergenic
TGGTTTCCAGGGTTCTAAGA+AGG 0.520928 4:-90706443 MsG0480023873.01.T01:intron
CCGGTTCTCAGATTCTAGCT+CGG 0.521831 4:+90711760 None:intergenic
GCTACTTGATCTAGCATGAA+AGG 0.524297 4:-90712988 MsG0480023873.01.T01:intron
TTTGCAGGAACAATTACTAC+AGG 0.526179 4:-90711303 MsG0480023873.01.T01:intron
ACACGAGCTAACACAGTTGA+AGG 0.534521 4:-90707764 MsG0480023873.01.T01:intron
GCTTAAGGGGTATCAGGAAG+AGG 0.536160 4:-90712894 MsG0480023873.01.T01:CDS
TAGTAACTCCCAGAATGGTT+TGG 0.537787 4:-90714002 MsG0480023873.01.T01:five_prime_UTR
GACTGGGAAGTGGCCACAAG+TGG 0.542533 4:-90707840 MsG0480023873.01.T01:three_prime_UTR
GTGTCCCTCTCCGATCCACT+TGG 0.542837 4:+90713832 None:intergenic
TGTTGAGAAAGTGGTTTCCA+GGG 0.546101 4:-90706454 MsG0480023873.01.T01:three_prime_UTR
GGTGGCAGAACTTTCAGCTA+AGG 0.546982 4:-90707422 MsG0480023873.01.T01:three_prime_UTR
GAAGACTTGAAGAGCGAAGT+AGG 0.548247 4:-90711667 MsG0480023873.01.T01:CDS
ACAGCAACTGAGGCAAGAGC+TGG 0.549391 4:+90712785 None:intergenic
GGAGTCTCCGCCAAGTGGAT+CGG 0.552009 4:-90713842 MsG0480023873.01.T01:CDS
ACAACACCTTCTTAGAACCC+TGG 0.554827 4:+90706437 None:intergenic
TCATCAATCATATGGATCAA+AGG 0.557357 4:-90706796 MsG0480023873.01.T01:intron
AGTGGGTTATAATTCAATTG+AGG 0.558132 4:-90707868 MsG0480023873.01.T01:three_prime_UTR
AATCAGACCTTTCCAGAAAG+CGG 0.559556 4:+90713784 None:intergenic
GTTGGAAGATGATATATCCA+AGG 0.569133 4:-90707371 MsG0480023873.01.T01:intron
GGCAGTTGAAGGAGAAAATG+GGG 0.570818 4:-90706554 MsG0480023873.01.T01:three_prime_UTR
AGGCATAGTAACTCCCAGAA+TGG 0.571046 4:-90714007 MsG0480023873.01.T01:five_prime_UTR
TCCGCCAAGTGGATCGGAGA+GGG 0.574061 4:-90713836 MsG0480023873.01.T01:CDS
ACTCGAAACAGCCGAGCAGA+AGG 0.575671 4:-90707443 MsG0480023873.01.T01:three_prime_UTR
TCTTGGTTTGGAGAGAGAGA+AGG 0.577076 4:-90710936 MsG0480023873.01.T01:intron
TGAGGCTGAAGACTGGGAAG+TGG 0.578334 4:-90707850 MsG0480023873.01.T01:three_prime_UTR
TTTGATTACCAGACTGAGCA+CGG 0.583328 4:+90711202 None:intergenic
GTGGGAGGAGATGAGCAAGA+TGG 0.585475 4:-90707821 MsG0480023873.01.T01:three_prime_UTR
TTCTTAACAGAGAGAAGACA+TGG 0.590497 4:-90713968 MsG0480023873.01.T01:five_prime_UTR
GAAAATGAAAGTTGAGCTTG+AGG 0.599598 4:-90711738 MsG0480023873.01.T01:CDS
GGAAAGAGATCAAAGATACA+AGG 0.604028 4:-90705606 MsG0480023873.01.T01:three_prime_UTR
CGAAACAGCCGAGCAGAAGG+TGG 0.605027 4:-90707440 MsG0480023873.01.T01:three_prime_UTR
TGGTCATACATTCAGGCAGT+GGG 0.605843 4:-90707885 MsG0480023873.01.T01:intron
AGCAGAGGCCAATCTCCTGA+TGG 0.608030 4:-90710987 MsG0480023873.01.T01:three_prime_UTR
AAGTTCTGCCACCTTCTGCT+CGG 0.610438 4:+90707432 None:intergenic
GAGGGCAGCTAAGCAAGCAG+AGG 0.612345 4:-90711002 MsG0480023873.01.T01:three_prime_UTR
TTTCCAGAAAGCGGAGACGA+CGG 0.616138 4:+90713793 None:intergenic
CAGCAGCGGACGATTTCTCT+CGG 0.631615 4:-90705557 MsG0480023873.01.T01:three_prime_UTR
GCTTGAGGAATTTAGAACAG+AGG 0.635432 4:-90711723 MsG0480023873.01.T01:CDS
GACAGAATCACACTCAGCAG+CGG 0.644787 4:-90705571 MsG0480023873.01.T01:three_prime_UTR
TTCCTGATACCCCTTAAGCA+AGG 0.649337 4:+90712898 None:intergenic
AAAATGGAGTCTCCGCCAAG+TGG 0.659317 4:-90713847 MsG0480023873.01.T01:CDS
GGGAAGTGGCCACAAGTGGG+AGG 0.662473 4:-90707836 MsG0480023873.01.T01:three_prime_UTR
AGACGACGGAGATCGGAGAG+TGG 0.662672 4:+90713807 None:intergenic
ACTGGGAAGTGGCCACAAGT+GGG 0.664420 4:-90707839 MsG0480023873.01.T01:three_prime_UTR
GCTGGAACTCACAGCAACTG+AGG 0.677059 4:+90712775 None:intergenic
TAAGCATCGCAATCTAGCAG+AGG 0.677217 4:-90711499 MsG0480023873.01.T01:CDS
ACACGCTTGGAGAGACCAAG+AGG 0.685945 4:-90706709 MsG0480023873.01.T01:intron
TTTCAAGAAAGCTTCACCCG+AGG 0.686730 4:-90712942 MsG0480023873.01.T01:CDS
CTCCGCCAAGTGGATCGGAG+AGG 0.701318 4:-90713837 MsG0480023873.01.T01:CDS
AAAATACAAGAAGATATACG+AGG 0.768531 4:-90706281 MsG0480023873.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTAATGAAAACTAATT+AGG + Chr4:90711813-90711832 None:intergenic 10.0%
!! TAAATAATAGAAATTAAGTA+TGG + Chr4:90705076-90705095 None:intergenic 10.0%
!! TAATTTATATCTAAACTATA+AGG - Chr4:90712866-90712885 MsG0480023873.01.T01:CDS 10.0%
!! TGATTAATAAATAAATACTT+CGG + Chr4:90711546-90711565 None:intergenic 10.0%
!!! TAAAATTTTTAAGTAATGAA+GGG - Chr4:90705435-90705454 MsG0480023873.01.T01:intron 10.0%
!! AATCAGATAAAAATAGATAA+AGG + Chr4:90709862-90709881 None:intergenic 15.0%
!! AATTGTATATTTCTTTGTAT+AGG - Chr4:90707017-90707036 MsG0480023873.01.T01:intron 15.0%
!! ACATTAGAAATTTAAAAGAA+AGG - Chr4:90707353-90707372 MsG0480023873.01.T01:intron 15.0%
!! CTGTAAAAAAATTATGAAAT+GGG - Chr4:90705512-90705531 MsG0480023873.01.T01:intron 15.0%
!! GACTTAATAAATTGAAATAT+CGG + Chr4:90709824-90709843 None:intergenic 15.0%
!! TATAAAAAAATCCATTTAGA+AGG + Chr4:90713334-90713353 None:intergenic 15.0%
!! TTACTTAAATAAAATTGGAT+CGG - Chr4:90705282-90705301 MsG0480023873.01.T01:three_prime_UTR 15.0%
!! TTAGTTTCTTAAAAATATTG+TGG + Chr4:90711120-90711139 None:intergenic 15.0%
!!! AAAACTAATTAGGTTTTATA+GGG + Chr4:90711803-90711822 None:intergenic 15.0%
!!! ATTTTTTCCAACAATTATTT+TGG + Chr4:90708899-90708918 None:intergenic 15.0%
!!! GTAAAATTTTTAAGTAATGA+AGG - Chr4:90705434-90705453 MsG0480023873.01.T01:intron 15.0%
!!! TAGTTTTCATTAATTATCTT+GGG - Chr4:90711816-90711835 MsG0480023873.01.T01:intron 15.0%
!!! TATATATTAGGTTTTATGTT+GGG + Chr4:90710435-90710454 None:intergenic 15.0%
!!! TATTTTAGACAAAAATAATG+TGG + Chr4:90712681-90712700 None:intergenic 15.0%
!!! TTAGTTTTCATTAATTATCT+TGG - Chr4:90711815-90711834 MsG0480023873.01.T01:intron 15.0%
!!! TTTAAATTTCTAATGTTTTC+TGG + Chr4:90707349-90707368 None:intergenic 15.0%
!!! TTTTATGTTAATATTGGTAT+AGG - Chr4:90712136-90712155 MsG0480023873.01.T01:intron 15.0%
!! AAAAATAAATGCTTCACTTA+GGG + Chr4:90712626-90712645 None:intergenic 20.0%
!! AAAAATCTGAGTACAATTTA+TGG - Chr4:90708913-90708932 MsG0480023873.01.T01:intron 20.0%
!! AAAATCTGAGTACAATTTAT+GGG - Chr4:90708914-90708933 MsG0480023873.01.T01:intron 20.0%
!! AAATGAAAAAGTAAATAGCT+TGG + Chr4:90706997-90707016 None:intergenic 20.0%
!! AAATTCTTGGAAACAAATAA+AGG + Chr4:90706901-90706920 None:intergenic 20.0%
!! AAGAAACAGAAAGAAAAAAA+GGG + Chr4:90709554-90709573 None:intergenic 20.0%
!! AATAAAAATATGTTTCCACT+TGG - Chr4:90709268-90709287 MsG0480023873.01.T01:intron 20.0%
!! AATAGCAATGCAAATTAATT+AGG - Chr4:90708227-90708246 MsG0480023873.01.T01:intron 20.0%
!! AATGAATTGCAAGAAAAAAA+AGG + Chr4:90713304-90713323 None:intergenic 20.0%
!! ACATTTAAACTTGTAATAGA+TGG - Chr4:90707268-90707287 MsG0480023873.01.T01:intron 20.0%
!! AGATTTGTGATAATATGTTT+CGG + Chr4:90709079-90709098 None:intergenic 20.0%
!! ATACAAATTAGTCATCATTT+AGG - Chr4:90709119-90709138 MsG0480023873.01.T01:three_prime_UTR 20.0%
!! ATAGATAAAGGAAAATAAAG+AGG + Chr4:90709850-90709869 None:intergenic 20.0%
!! ATTATACTCTTCATTTCAAA+TGG - Chr4:90710854-90710873 MsG0480023873.01.T01:intron 20.0%
!! ATTTATTTCACTCAATTAGT+GGG + Chr4:90708464-90708483 None:intergenic 20.0%
!! CAAGCTTACTTAAATAAAAT+TGG - Chr4:90705277-90705296 MsG0480023873.01.T01:three_prime_UTR 20.0%
!! CCTGTAAAAAAATTATGAAA+TGG - Chr4:90705511-90705530 MsG0480023873.01.T01:intron 20.0%
!! GAAAAAAATTATATTGCCTT+GGG - Chr4:90708948-90708967 MsG0480023873.01.T01:intron 20.0%
!! GAAAAAAGAAAATAAGCAAA+AGG - Chr4:90704791-90704810 MsG0480023873.01.T01:three_prime_UTR 20.0%
!! TAAAAAAATTATGAAATGGG+AGG - Chr4:90705515-90705534 MsG0480023873.01.T01:intron 20.0%
!! TAAAAATAAATGCTTCACTT+AGG + Chr4:90712627-90712646 None:intergenic 20.0%
!! TACTAACATGTATTTATGAA+TGG + Chr4:90712967-90712986 None:intergenic 20.0%
!! TCTAAAAAGAAAAAAAGACA+AGG + Chr4:90708630-90708649 None:intergenic 20.0%
!! TGAAAAAAATTATATTGCCT+TGG - Chr4:90708947-90708966 MsG0480023873.01.T01:intron 20.0%
!! TGATTAAAATTATGCTTTAC+AGG - Chr4:90713460-90713479 MsG0480023873.01.T01:intron 20.0%
!! TTAATAAATAAATACTTCGG+AGG + Chr4:90711543-90711562 None:intergenic 20.0%
!! TTTAAAAAACGAACAATATC+TGG + Chr4:90713405-90713424 None:intergenic 20.0%
!! TTTAGACCATTTATTAAATC+AGG + Chr4:90705581-90705600 None:intergenic 20.0%
!! TTTCACAAAATTAAGAAACA+TGG + Chr4:90708354-90708373 None:intergenic 20.0%
!! TTTCACATTAACAGAAAATA+AGG - Chr4:90712243-90712262 MsG0480023873.01.T01:intron 20.0%
!! TTTCTTAAAAATATTGTGGA+TGG + Chr4:90711116-90711135 None:intergenic 20.0%
!! TTTGAACCTGATTTAATAAA+TGG - Chr4:90705572-90705591 MsG0480023873.01.T01:three_prime_UTR 20.0%
!!! AAAATTTGCTTGAATTCATT+TGG + Chr4:90709215-90709234 None:intergenic 20.0%
!!! AATCAAATAGTTTTCAAATC+TGG - Chr4:90707632-90707651 MsG0480023873.01.T01:intron 20.0%
!!! AATGAATTCAAGCAAATTTT+TGG - Chr4:90709215-90709234 MsG0480023873.01.T01:intron 20.0%
!!! AATTTTATAGACTTTGAATG+TGG + Chr4:90712711-90712730 None:intergenic 20.0%
!!! AATTTTGATCCCATATATTT+TGG - Chr4:90709974-90709993 MsG0480023873.01.T01:intron 20.0%
!!! AGTATTTGTTATTCATTCAT+CGG - Chr4:90704942-90704961 MsG0480023873.01.T01:three_prime_UTR 20.0%
!!! ATATATGGGATCAAAATTTT+TGG + Chr4:90709972-90709991 None:intergenic 20.0%
!!! ATATATTAGGTTTTATGTTG+GGG + Chr4:90710434-90710453 None:intergenic 20.0%
!!! ATCAAATAGTTTTCAAATCT+GGG - Chr4:90707633-90707652 MsG0480023873.01.T01:intron 20.0%
!!! ATCATTGATTTATAGTAATG+AGG - Chr4:90711081-90711100 MsG0480023873.01.T01:intron 20.0%
!!! ATTAAAAATCTGAAACATTG+TGG - Chr4:90713985-90714004 MsG0480023873.01.T01:five_prime_UTR 20.0%
!!! ATTTTGATCCCATATATTTT+GGG - Chr4:90709975-90709994 MsG0480023873.01.T01:intron 20.0%
!!! CAAAATCTTTTTCAAAAACT+TGG + Chr4:90709342-90709361 None:intergenic 20.0%
!!! CAAGTTTTTGAAAAAGATTT+TGG - Chr4:90709340-90709359 MsG0480023873.01.T01:intron 20.0%
!!! CACATAATTTTGACTATATT+TGG - Chr4:90711162-90711181 MsG0480023873.01.T01:intron 20.0%
!!! CCATTTCATAATTTTTTTAC+AGG + Chr4:90705514-90705533 None:intergenic 20.0%
!!! CTATATATTAGGTTTTATGT+TGG + Chr4:90710436-90710455 None:intergenic 20.0%
!!! GAAAACTAATTAGGTTTTAT+AGG + Chr4:90711804-90711823 None:intergenic 20.0%
!!! GGATTTTTTTATATCGTTTA+TGG - Chr4:90713341-90713360 MsG0480023873.01.T01:intron 20.0%
!!! GGTATGTTTTATGTTAATAT+TGG - Chr4:90712130-90712149 MsG0480023873.01.T01:intron 20.0%
!!! GTTGATGAAATTATGATATT+TGG + Chr4:90711738-90711757 None:intergenic 20.0%
!!! TATATGGGATCAAAATTTTT+GGG + Chr4:90709971-90709990 None:intergenic 20.0%
!!! TATCTACATATTCTAGTTAA+TGG - Chr4:90706829-90706848 MsG0480023873.01.T01:intron 20.0%
!!! TATCTGATTGTTTTTTGAAA+AGG - Chr4:90709873-90709892 MsG0480023873.01.T01:intron 20.0%
!!! TTCAGATTTTTAATCTAAAC+TGG + Chr4:90713979-90713998 None:intergenic 20.0%
!!! TTTATGTAACATCTTGTTTT+GGG - Chr4:90710880-90710899 MsG0480023873.01.T01:intron 20.0%
!!! TTTCTGTTTCTTCTTTAATT+GGG - Chr4:90709562-90709581 MsG0480023873.01.T01:intron 20.0%
!!! TTTGCATTCTTTTATACAAT+CGG - Chr4:90713494-90713513 MsG0480023873.01.T01:intron 20.0%
!!! TTTTATGTAACATCTTGTTT+TGG - Chr4:90710879-90710898 MsG0480023873.01.T01:intron 20.0%
!!! TTTTTATTTTAATATGACGG+TGG - Chr4:90712207-90712226 MsG0480023873.01.T01:intron 20.0%
! AAAAATGCATTAAGATTGAC+AGG + Chr4:90706113-90706132 None:intergenic 25.0%
! AAAATAAATGCTTCACTTAG+GGG + Chr4:90712625-90712644 None:intergenic 25.0%
! AAAATACAAGAAGATATACG+AGG - Chr4:90712537-90712556 MsG0480023873.01.T01:intron 25.0%
! AAACAGTAATAAAACACCAA+TGG + Chr4:90711778-90711797 None:intergenic 25.0%
! AAAGAAAGATTGATAAATCG+GGG + Chr4:90709147-90709166 None:intergenic 25.0%
! AAATGTCAAATAGAAATCAG+TGG + Chr4:90707254-90707273 None:intergenic 25.0%
! AACAGTAATAAAACACCAAT+GGG + Chr4:90711777-90711796 None:intergenic 25.0%
! AAGAAAACAGTCAGAAAAAT+AGG - Chr4:90705746-90705765 MsG0480023873.01.T01:intron 25.0%
! AAGCAATAATAACTTAGAGA+AGG + Chr4:90707470-90707489 None:intergenic 25.0%
! AAGCAATTATGTGAAGAAAA+TGG + Chr4:90712602-90712621 None:intergenic 25.0%
! AAGTATCCTAAATGTTAATC+AGG + Chr4:90713895-90713914 None:intergenic 25.0%
! AATACCTATAGATCATATCA+AGG + Chr4:90711290-90711309 None:intergenic 25.0%
! AATAGAAATTGCTCAACATT+AGG + Chr4:90706657-90706676 None:intergenic 25.0%
! AATCAATAAAAACCATGTGT+AGG - Chr4:90710342-90710361 MsG0480023873.01.T01:intron 25.0%
! AATCTTATGCTTATGTCTAT+GGG + Chr4:90707972-90707991 None:intergenic 25.0%
! AATGTATGACTAAGTTATCT+TGG + Chr4:90712755-90712774 None:intergenic 25.0%
! ACAAAAACTGATACAAAAGT+TGG - Chr4:90711429-90711448 MsG0480023873.01.T01:intron 25.0%
! AGAATTAATCTTGAAACTAG+TGG + Chr4:90708276-90708295 None:intergenic 25.0%
! AGAGAAAGTAAAAGAAATTG+TGG - Chr4:90707292-90707311 MsG0480023873.01.T01:intron 25.0%
! AGAGATGATGAAGTAATTAA+GGG + Chr4:90708112-90708131 None:intergenic 25.0%
! AGCTTCCTATAAAAAAAAGA+TGG + Chr4:90708010-90708029 None:intergenic 25.0%
! ATAACATGTTCAAATACACA+AGG + Chr4:90711229-90711248 None:intergenic 25.0%
! ATACAAAACAATACAGGTAA+AGG + Chr4:90707929-90707948 None:intergenic 25.0%
! ATAGAAATTGCTCAACATTA+GGG + Chr4:90706656-90706675 None:intergenic 25.0%
! ATAGACGACAGTTAATATTT+AGG + Chr4:90706798-90706817 None:intergenic 25.0%
! ATCTTAGTGAAATTTACTTC+TGG - Chr4:90710502-90710521 MsG0480023873.01.T01:intron 25.0%
! ATTCAAATGATGTAGATTGT+AGG + Chr4:90711977-90711996 None:intergenic 25.0%
! ATTTGTGTTGTGTTTACTTT+GGG + Chr4:90708668-90708687 None:intergenic 25.0%
! CAAACAAACCCAAAATATAT+GGG + Chr4:90709986-90710005 None:intergenic 25.0%
! CACTATGCTTTCTATATATT+AGG + Chr4:90710447-90710466 None:intergenic 25.0%
! CATTTCAATGAAATTCTCTT+TGG + Chr4:90705476-90705495 None:intergenic 25.0%
! CTAACATATGTACATCTAAA+TGG + Chr4:90706319-90706338 None:intergenic 25.0%
! GAAAGAAAGATTGATAAATC+GGG + Chr4:90709148-90709167 None:intergenic 25.0%
! GAAGAAACAGAAAGAAAAAA+AGG + Chr4:90709555-90709574 None:intergenic 25.0%
! GAATTAATCTTGAAACTAGT+GGG + Chr4:90708275-90708294 None:intergenic 25.0%
! GAGAATTTCATTGAAATGAA+TGG - Chr4:90705478-90705497 MsG0480023873.01.T01:intron 25.0%
! GATTTATTTCACTCAATTAG+TGG + Chr4:90708465-90708484 None:intergenic 25.0%
! GGAAAGAAAGATTGATAAAT+CGG + Chr4:90709149-90709168 None:intergenic 25.0%
! GTAATTAATACAAGACAGTT+TGG + Chr4:90708070-90708089 None:intergenic 25.0%
! GTATAAAAGAATGCAAAGTT+CGG + Chr4:90713491-90713510 None:intergenic 25.0%
! GTCTTATAAAGCAAATAACA+TGG + Chr4:90711263-90711282 None:intergenic 25.0%
! TAATCTTATGCTTATGTCTA+TGG + Chr4:90707973-90707992 None:intergenic 25.0%
! TACAAAACAATACAGGTAAA+GGG + Chr4:90707928-90707947 None:intergenic 25.0%
! TATAAAAGAATGCAAAGTTC+GGG + Chr4:90713490-90713509 None:intergenic 25.0%
! TATTTGTGTTGTGTTTACTT+TGG + Chr4:90708669-90708688 None:intergenic 25.0%
! TCATTAATTATCACACCATA+CGG + Chr4:90706425-90706444 None:intergenic 25.0%
! TCTTAGTGAAATTTACTTCT+GGG - Chr4:90710503-90710522 MsG0480023873.01.T01:intron 25.0%
! TCTTCTATTAGTGATTGATA+TGG + Chr4:90711504-90711523 None:intergenic 25.0%
! TGAAATCATGGTTAAATGTA+TGG + Chr4:90713865-90713884 None:intergenic 25.0%
! TGAAGATAAAAACTAGATGA+TGG + Chr4:90712446-90712465 None:intergenic 25.0%
! TGGAAATAATGTCAAATAGA+AGG + Chr4:90712181-90712200 None:intergenic 25.0%
! TGTGTATTTGAACATGTTAT+GGG - Chr4:90711229-90711248 MsG0480023873.01.T01:three_prime_UTR 25.0%
! TTAACATAAAACATACCTCT+TGG + Chr4:90712127-90712146 None:intergenic 25.0%
! TTAAGAACTTACGTTTGTAT+TGG - Chr4:90706168-90706187 MsG0480023873.01.T01:intron 25.0%
! TTCCTATAAAAAAAAGATGG+TGG + Chr4:90708007-90708026 None:intergenic 25.0%
! TTGATGCATTACTTCAAAAT+TGG - Chr4:90705235-90705254 MsG0480023873.01.T01:intron 25.0%
! TTGTGTATTTGAACATGTTA+TGG - Chr4:90711228-90711247 MsG0480023873.01.T01:three_prime_UTR 25.0%
! TTTCAAAATGAAGAAAGAGA+AGG + Chr4:90707730-90707749 None:intergenic 25.0%
! TTTCCTACCAAAATAATTGT+TGG - Chr4:90708889-90708908 MsG0480023873.01.T01:intron 25.0%
!! AATACACCATAAATTTTCTG+TGG - Chr4:90709457-90709476 MsG0480023873.01.T01:intron 25.0%
!! ACGAGACTTTTAATATTGTA+TGG - Chr4:90710081-90710100 MsG0480023873.01.T01:intron 25.0%
!! ACTCAATTCTTTTAAATTGC+GGG - Chr4:90706259-90706278 MsG0480023873.01.T01:three_prime_UTR 25.0%
!! ATAGCGTTTTATATATAGAG+AGG - Chr4:90713801-90713820 MsG0480023873.01.T01:CDS 25.0%
!! ATGAAAAGCATATTGGAAAA+AGG + Chr4:90711683-90711702 None:intergenic 25.0%
!! CAAGAAAGTAAAAATTTTGC+AGG - Chr4:90710829-90710848 MsG0480023873.01.T01:intron 25.0%
!! CTTTCTGTTTCTTCTTTAAT+TGG - Chr4:90709561-90709580 MsG0480023873.01.T01:intron 25.0%
!! GACTCAATTCTTTTAAATTG+CGG - Chr4:90706258-90706277 MsG0480023873.01.T01:three_prime_UTR 25.0%
!! TACTTGGTTTGAATAAAAGT+AGG + Chr4:90709007-90709026 None:intergenic 25.0%
!! TATTTTTCTGACTGTTTTCT+TGG + Chr4:90705747-90705766 None:intergenic 25.0%
!! TGTTTTCTCTTAGTTTCAAT+TGG - Chr4:90709379-90709398 MsG0480023873.01.T01:intron 25.0%
!! TTGCATTCTTTTATACAATC+GGG - Chr4:90713495-90713514 MsG0480023873.01.T01:intron 25.0%
!! TTTTACAGGATTATAGACAA+CGG - Chr4:90706867-90706886 MsG0480023873.01.T01:intron 25.0%
!!! ACACATAATATTGTTTTTGC+AGG + Chr4:90708435-90708454 None:intergenic 25.0%
!!! ACACATGGTTTTTATTGATT+TGG + Chr4:90710342-90710361 None:intergenic 25.0%
!!! CATCTAGTTTTTATCTTCAA+TGG - Chr4:90712447-90712466 MsG0480023873.01.T01:intron 25.0%
!!! TACCACCATCTTTTTTTTAT+AGG - Chr4:90708002-90708021 MsG0480023873.01.T01:three_prime_UTR 25.0%
!!! TCACTGTTATTTCCAAATTT+TGG - Chr4:90705808-90705827 MsG0480023873.01.T01:intron 25.0%
!!! TCATCAACTATTTTTTCAGT+TGG + Chr4:90710803-90710822 None:intergenic 25.0%
!!! TGAAGTAATTAAGGGTATTT+TGG + Chr4:90708104-90708123 None:intergenic 25.0%
!!! TTCTACTGTTATTTTTGCTT+CGG - Chr4:90705115-90705134 MsG0480023873.01.T01:three_prime_UTR 25.0%
!!! TTTCCAACAATTATTTTGGT+AGG + Chr4:90708895-90708914 None:intergenic 25.0%
AAAACAGTCAGAAAAATAGG+CGG - Chr4:90705749-90705768 MsG0480023873.01.T01:intron 30.0%
AAACAAACTTGACTTATCCT+CGG + Chr4:90705896-90705915 None:intergenic 30.0%
AAACAGAAAGAAAAAAAGGG+TGG + Chr4:90709551-90709570 None:intergenic 30.0%
AAATCTGTGTTAGATGAACA+AGG - Chr4:90705704-90705723 MsG0480023873.01.T01:intron 30.0%
AAATTTCCTATAGCACCTTT+AGG + Chr4:90706745-90706764 None:intergenic 30.0%
AACTGTCGTCTATTTGTTTA+TGG - Chr4:90706805-90706824 MsG0480023873.01.T01:intron 30.0%
AAGATGATATATCCAAGGTT+TGG - Chr4:90711452-90711471 MsG0480023873.01.T01:intron 30.0%
AATAGAGGAATCAATAGTCT+TGG + Chr4:90707494-90707513 None:intergenic 30.0%
AATCAAATAGATGTGCAAGT+GGG + Chr4:90710241-90710260 None:intergenic 30.0%
ACAGTCGCAACAAAATTATA+CGG + Chr4:90711867-90711886 None:intergenic 30.0%
AGACTATAATGTTGAGAAAG+TGG - Chr4:90712355-90712374 MsG0480023873.01.T01:intron 30.0%
AGAGAACCTGATTAACATTT+AGG - Chr4:90713886-90713905 MsG0480023873.01.T01:five_prime_UTR 30.0%
AGAGCATAAGGTGAAAAAAT+AGG + Chr4:90710204-90710223 None:intergenic 30.0%
AGCAATAAAAACTGGTACTA+AGG - Chr4:90712998-90713017 MsG0480023873.01.T01:intron 30.0%
AGCAGATAATGTTAACTGTA+CGG - Chr4:90712314-90712333 MsG0480023873.01.T01:intron 30.0%
AGGCATAAATTACAGATTAG+AGG + Chr4:90710120-90710139 None:intergenic 30.0%
AGTGAAATTTCTATTCGTAC+TGG - Chr4:90710463-90710482 MsG0480023873.01.T01:intron 30.0%
AGTGATTGATATGGTAATAG+AGG + Chr4:90711495-90711514 None:intergenic 30.0%
ATAAAGGAAAATAAAGAGGC+AGG + Chr4:90709846-90709865 None:intergenic 30.0%
ATAACAAATCACACTGCATT+TGG + Chr4:90705377-90705396 None:intergenic 30.0%
ATAGTAATTGTTCCAAACCT+TGG + Chr4:90711467-90711486 None:intergenic 30.0%
ATATATCTAGTAATCAGCTC+TGG - Chr4:90712924-90712943 MsG0480023873.01.T01:CDS 30.0%
ATCTGTGTAGATCAAGAAAA+GGG - Chr4:90706359-90706378 MsG0480023873.01.T01:intron 30.0%
ATTAGAGCAACAGTTTGTAT+TGG - Chr4:90707176-90707195 MsG0480023873.01.T01:three_prime_UTR 30.0%
CAAAATATGAATATCTGCTG+AGG + Chr4:90709056-90709075 None:intergenic 30.0%
CAGAAATTAATTGCATTTGC+AGG - Chr4:90706451-90706470 MsG0480023873.01.T01:three_prime_UTR 30.0%
CATGCTAAGAAGAAAATTCT+TGG + Chr4:90706914-90706933 None:intergenic 30.0%
CATTGATACATCCTTCTAAA+TGG - Chr4:90713320-90713339 MsG0480023873.01.T01:intron 30.0%
CCAAACAAACCCAAAATATA+TGG + Chr4:90709987-90710006 None:intergenic 30.0%
CTCTAAGTCAAAATCTGAAA+GGG + Chr4:90705678-90705697 None:intergenic 30.0%
CTGTACTAACAAAAGTGAAA+GGG - Chr4:90705620-90705639 MsG0480023873.01.T01:intron 30.0%
CTTACAAAAAGAGCAAAGTT+TGG - Chr4:90705955-90705974 MsG0480023873.01.T01:intron 30.0%
CTTGTACCACAGAAAATTTA+TGG + Chr4:90709466-90709485 None:intergenic 30.0%
CTTGTCAAAGCAATAAAAAC+TGG - Chr4:90712990-90713009 MsG0480023873.01.T01:intron 30.0%
CTTTCTCAACATTATAGTCT+TGG + Chr4:90712355-90712374 None:intergenic 30.0%
GAATAAAAGTAGGTAACTGA+TGG + Chr4:90708997-90709016 None:intergenic 30.0%
GAGAGATGATGAAGTAATTA+AGG + Chr4:90708113-90708132 None:intergenic 30.0%
GATGGTTATATGGAATTTGA+TGG + Chr4:90706572-90706591 None:intergenic 30.0%
GCAATAAAAACTGGTACTAA+GGG - Chr4:90712999-90713018 MsG0480023873.01.T01:intron 30.0%
GGAAAGTTCTTTATGATCTT+TGG + Chr4:90711606-90711625 None:intergenic 30.0%
GTCTTACAATACAATAGTTC+CGG + Chr4:90710280-90710299 None:intergenic 30.0%
GTGAAATTTCTATTCGTACT+GGG - Chr4:90710464-90710483 MsG0480023873.01.T01:intron 30.0%
GTTAATCTCTGAATTGAACA+TGG - Chr4:90709673-90709692 MsG0480023873.01.T01:intron 30.0%
GTTATGCTTTCTCTTGATAT+AGG - Chr4:90710736-90710755 MsG0480023873.01.T01:intron 30.0%
TAATCAAATAGATGTGCAAG+TGG + Chr4:90710242-90710261 None:intergenic 30.0%
TAGATCAAGTAGCCAAAATT+TGG + Chr4:90705823-90705842 None:intergenic 30.0%
TATATAGATAGGAAGGCAAA+TGG + Chr4:90709509-90709528 None:intergenic 30.0%
TCACTGATACAAAACAATAC+AGG + Chr4:90707935-90707954 None:intergenic 30.0%
TCATCAATCATATGGATCAA+AGG - Chr4:90712022-90712041 MsG0480023873.01.T01:intron 30.0%
TCTCTAAGTCAAAATCTGAA+AGG + Chr4:90705679-90705698 None:intergenic 30.0%
TCTGTACTAACAAAAGTGAA+AGG - Chr4:90705619-90705638 MsG0480023873.01.T01:intron 30.0%
TCTTAAACACACACAAATAC+CGG + Chr4:90710693-90710712 None:intergenic 30.0%
TCTTGATAAGAACCGAAAAA+TGG - Chr4:90711030-90711049 MsG0480023873.01.T01:intron 30.0%
TGATTGAAATTGTCAAGTGA+AGG + Chr4:90706520-90706539 None:intergenic 30.0%
TGGAAGGAGACTTATAAAAA+GGG + Chr4:90708050-90708069 None:intergenic 30.0%
TGTTCCTTGATATGATCTAT+AGG - Chr4:90711283-90711302 MsG0480023873.01.T01:three_prime_UTR 30.0%
TTAATACAAGACAGTTTGGA+AGG + Chr4:90708066-90708085 None:intergenic 30.0%
TTATCTGTCATGCATGTAAT+AGG - Chr4:90713191-90713210 MsG0480023873.01.T01:intron 30.0%
TTCAGAGATTAACTTCTCTT+TGG + Chr4:90709666-90709685 None:intergenic 30.0%
TTCTTCACGTTCATTTGATA+AGG + Chr4:90709720-90709739 None:intergenic 30.0%
TTGGAAGGAGACTTATAAAA+AGG + Chr4:90708051-90708070 None:intergenic 30.0%
TTGGATGTTGTTGATGTAAA+TGG + Chr4:90710052-90710071 None:intergenic 30.0%
TTGTTTAATGCCTTGCTTAA+GGG - Chr4:90705910-90705929 MsG0480023873.01.T01:intron 30.0%
TTTGTTTAATGCCTTGCTTA+AGG - Chr4:90705909-90705928 MsG0480023873.01.T01:intron 30.0%
! AAGTATTGTCAGCTAAGTAA+TGG - Chr4:90709175-90709194 MsG0480023873.01.T01:three_prime_UTR 30.0%
! ACAGCTTTTGATAGATGTTA+AGG + Chr4:90705993-90706012 None:intergenic 30.0%
! ACTTTGGAGGAAATAAAGAT+TGG + Chr4:90708858-90708877 None:intergenic 30.0%
! AGAAGTGTGCATATATAGAT+AGG + Chr4:90709520-90709539 None:intergenic 30.0%
! AGATAAAAACTAGATGATGG+AGG + Chr4:90712443-90712462 None:intergenic 30.0%
! CACGTAAATGATATTTTCAG+AGG - Chr4:90707789-90707808 MsG0480023873.01.T01:three_prime_UTR 30.0%
! CATAAATTTTCTGTGGTACA+AGG - Chr4:90709464-90709483 MsG0480023873.01.T01:intron 30.0%
! CTGAAACATTGTGGATATTT+TGG - Chr4:90713994-90714013 MsG0480023873.01.T01:five_prime_UTR 30.0%
! CTGGAGCAAAATGAAAATTT+TGG + Chr4:90713960-90713979 None:intergenic 30.0%
! CTTCAATGGTGATATTGTTT+TGG - Chr4:90712461-90712480 MsG0480023873.01.T01:intron 30.0%
! TTCTAGTTAATGGTGATATG+TGG - Chr4:90706839-90706858 MsG0480023873.01.T01:intron 30.0%
!! AAGATTCTGAAACTAAGAAG+AGG - Chr4:90708595-90708614 MsG0480023873.01.T01:intron 30.0%
!! AGTGGGTTATAATTCAATTG+AGG - Chr4:90710950-90710969 MsG0480023873.01.T01:three_prime_UTR 30.0%
!! GATAAAAACTAGATGATGGA+GGG + Chr4:90712442-90712461 None:intergenic 30.0%
!! TTCTTTATGATCTTTGGAAC+TGG + Chr4:90711600-90711619 None:intergenic 30.0%
!!! AAATTGCGGGAGATTTTTTA+TGG - Chr4:90706272-90706291 MsG0480023873.01.T01:three_prime_UTR 30.0%
!!! CCATATATTTTGGGTTTGTT+TGG - Chr4:90709984-90710003 MsG0480023873.01.T01:intron 30.0%
!!! TTCAGATTTTGACTTAGAGA+AGG - Chr4:90705679-90705698 MsG0480023873.01.T01:intron 30.0%
AAAGTCTCGTGTATAAAGCT+TGG + Chr4:90710071-90710090 None:intergenic 35.0%
AAATGAGACAGAAACTTTGG+AGG + Chr4:90708871-90708890 None:intergenic 35.0%
AACAAACTTGACTTATCCTC+GGG + Chr4:90705895-90705914 None:intergenic 35.0%
AACTCACTTGAAGAATCAAC+AGG - Chr4:90707119-90707138 MsG0480023873.01.T01:intron 35.0%
AAGACAGATGGAGCAATATT+GGG + Chr4:90710379-90710398 None:intergenic 35.0%
AAGATACAAGGATTGGATTC+AGG - Chr4:90713224-90713243 MsG0480023873.01.T01:intron 35.0%
ACAAACAATGCTTCTTGGTT+TGG - Chr4:90707870-90707889 MsG0480023873.01.T01:three_prime_UTR 35.0%
ACAGAAAATAAGGCAGTTGA+AGG - Chr4:90712253-90712272 MsG0480023873.01.T01:intron 35.0%
ACGTATGATAATATCTCGAG+AGG + Chr4:90710314-90710333 None:intergenic 35.0%
ACTAGCATTGCATCTGATTT+GGG + Chr4:90710023-90710042 None:intergenic 35.0%
AGATACAAGGATTGGATTCA+GGG - Chr4:90713225-90713244 MsG0480023873.01.T01:intron 35.0%
AGGATTATAGACAACGGTTT+AGG - Chr4:90706873-90706892 MsG0480023873.01.T01:intron 35.0%
AGTTAATGGTGATATGTGGT+GGG - Chr4:90706843-90706862 MsG0480023873.01.T01:intron 35.0%
AGTTAGAGAAGACTTACTTC+TGG + Chr4:90710624-90710643 None:intergenic 35.0%
ATATGTCCATGAGATGAGAT+GGG - Chr4:90706203-90706222 MsG0480023873.01.T01:intron 35.0%
ATGCTTTCTCTTGATATAGG+AGG - Chr4:90710739-90710758 MsG0480023873.01.T01:intron 35.0%
ATGTATGACCATGAGTTAGA+TGG + Chr4:90710924-90710943 None:intergenic 35.0%
ATTGTTCCTGCAAACAATAG+AGG + Chr4:90707509-90707528 None:intergenic 35.0%
CAAGGTATATGGTAGTTCAT+TGG + Chr4:90706706-90706725 None:intergenic 35.0%
CACAAGTTTCACAAGGTATA+TGG + Chr4:90706717-90706736 None:intergenic 35.0%
CATTCATCGGTAACAGAAAA+TGG - Chr4:90704955-90704974 MsG0480023873.01.T01:three_prime_UTR 35.0%
CCTATTAAGCAGTGATTCAT+GGG + Chr4:90706594-90706613 None:intergenic 35.0%
CGGATGAATTTAGTCTACTT+TGG + Chr4:90709804-90709823 None:intergenic 35.0%
CTGGAATGAAAGTCCTTAAA+AGG - Chr4:90706494-90706513 MsG0480023873.01.T01:three_prime_UTR 35.0%
CTTAAACACACACAAATACC+GGG + Chr4:90710692-90710711 None:intergenic 35.0%
CTTCACAAATAAGTACACCA+CGG + Chr4:90711707-90711726 None:intergenic 35.0%
CTTCTGCATCATCAATCATA+TGG - Chr4:90712014-90712033 MsG0480023873.01.T01:intron 35.0%
CTTGTCATTCTATACAGTCA+TGG - Chr4:90713634-90713653 MsG0480023873.01.T01:intron 35.0%
GAAAATGAAAGTTGAGCTTG+AGG - Chr4:90707080-90707099 MsG0480023873.01.T01:intron 35.0%
GAAACTTGTGATCATCCTAA+AGG - Chr4:90706727-90706746 MsG0480023873.01.T01:three_prime_UTR 35.0%
GAGATCAAAGATACAAGGAT+TGG - Chr4:90713217-90713236 MsG0480023873.01.T01:intron 35.0%
GATCTGTGTAGATCAAGAAA+AGG - Chr4:90706358-90706377 MsG0480023873.01.T01:intron 35.0%
GCAGATAATGTTAACTGTAC+GGG - Chr4:90712315-90712334 MsG0480023873.01.T01:intron 35.0%
GGAAAATGAGACAGAAACTT+TGG + Chr4:90708874-90708893 None:intergenic 35.0%
GGAAAGAGATCAAAGATACA+AGG - Chr4:90713212-90713231 MsG0480023873.01.T01:intron 35.0%
GGTACTATTTATAATGCCCA+AGG + Chr4:90708967-90708986 None:intergenic 35.0%
GTATGCAGAAGATCTTGAAA+TGG - Chr4:90712496-90712515 MsG0480023873.01.T01:intron 35.0%
GTGTGCATATATAGATAGGA+AGG + Chr4:90709516-90709535 None:intergenic 35.0%
GTTGGAAGATGATATATCCA+AGG - Chr4:90711447-90711466 MsG0480023873.01.T01:intron 35.0%
TAACTCATGGTCATACATTC+AGG - Chr4:90710926-90710945 MsG0480023873.01.T01:intron 35.0%
TACTTCGGAGGAAAATAAAG+AGG + Chr4:90711531-90711550 None:intergenic 35.0%
TAGGTAACTGATGGTATATG+TGG + Chr4:90708988-90709007 None:intergenic 35.0%
TAGTTAATGGTGATATGTGG+TGG - Chr4:90706842-90706861 MsG0480023873.01.T01:intron 35.0%
TATATGTCCATGAGATGAGA+TGG - Chr4:90706202-90706221 MsG0480023873.01.T01:intron 35.0%
TCAGGTTCTCTATGAAATCA+TGG + Chr4:90713877-90713896 None:intergenic 35.0%
TCATTACATTAAACGACCAC+TGG + Chr4:90713732-90713751 None:intergenic 35.0%
TGAAGTAATGCATCAATTCG+AGG + Chr4:90705231-90705250 None:intergenic 35.0%
TGAGATGCAAAAATGCATGA+CGG - Chr4:90710555-90710574 MsG0480023873.01.T01:intron 35.0%
TGATTCATGGGATGGTTATA+TGG + Chr4:90706582-90706601 None:intergenic 35.0%
TGGAGAATATTATGTAGTGC+TGG + Chr4:90706064-90706083 None:intergenic 35.0%
TGGTCTTCAGTAATACACAA+GGG + Chr4:90709322-90709341 None:intergenic 35.0%
TGTTCAAATACACAAGGTAC+AGG + Chr4:90711223-90711242 None:intergenic 35.0%
TGTTTAATGCCTTGCTTAAG+GGG - Chr4:90705911-90705930 MsG0480023873.01.T01:intron 35.0%
TTCTTAACAGAGAGAAGACA+TGG - Chr4:90704850-90704869 MsG0480023873.01.T01:three_prime_UTR 35.0%
TTGAGCTTGATCTTGATCTA+AGG + Chr4:90712052-90712071 None:intergenic 35.0%
TTGATTCCTCTATTGTTTGC+AGG - Chr4:90707500-90707519 MsG0480023873.01.T01:intron 35.0%
TTTAATATGACGGTGGACAT+GGG - Chr4:90712214-90712233 MsG0480023873.01.T01:intron 35.0%
TTTACTGCAAGTTAGTGTCA+TGG + Chr4:90706084-90706103 None:intergenic 35.0%
TTTGCAGGAACAATTACTAC+AGG - Chr4:90707515-90707534 MsG0480023873.01.T01:intron 35.0%
! AAAGAACTTTCCTTGATGAC+TGG - Chr4:90711614-90711633 MsG0480023873.01.T01:intron 35.0%
! AAATATGTTTCCACTTGGTG+TGG - Chr4:90709273-90709292 MsG0480023873.01.T01:intron 35.0%
! AAGAACTTTCCTTGATGACT+GGG - Chr4:90711615-90711634 MsG0480023873.01.T01:intron 35.0%
! AAGTGAAAGGGAAAGCATAT+AGG - Chr4:90705632-90705651 MsG0480023873.01.T01:intron 35.0%
! CAAGCTCAACTTTCATTTTC+CGG + Chr4:90707080-90707099 None:intergenic 35.0%
! CTTACTTCTGGTTAGGATTT+AGG + Chr4:90710612-90710631 None:intergenic 35.0%
! CTTTTGCTGCATTCTCAAAA+AGG - Chr4:90712572-90712591 MsG0480023873.01.T01:intron 35.0%
! GAATATCTGCTGAGGTATTT+CGG + Chr4:90709048-90709067 None:intergenic 35.0%
! GATATTTTCAGAGGAAGAGA+GGG - Chr4:90707798-90707817 MsG0480023873.01.T01:three_prime_UTR 35.0%
! TCATACGTTGACTACAGTAT+TGG - Chr4:90707438-90707457 MsG0480023873.01.T01:three_prime_UTR 35.0%
! TGATATTTTCAGAGGAAGAG+AGG - Chr4:90707797-90707816 MsG0480023873.01.T01:three_prime_UTR 35.0%
! TTGGTCTTCAGTAATACACA+AGG + Chr4:90709323-90709342 None:intergenic 35.0%
! TTTTAATATGACGGTGGACA+TGG - Chr4:90712213-90712232 MsG0480023873.01.T01:intron 35.0%
!! ATACTTGCTATGAAGACAGA+TGG + Chr4:90710391-90710410 None:intergenic 35.0%
!! CTTTTTGAGAATGCAGCAAA+AGG + Chr4:90712574-90712593 None:intergenic 35.0%
!! GATGTAGTTCTACTGTTTTC+AGG - Chr4:90711327-90711346 MsG0480023873.01.T01:intron 35.0%
!! TAATATCTCGAGAGGTGTTA+TGG + Chr4:90710306-90710325 None:intergenic 35.0%
!! TGGTTGTTTTCATTCCGATT+TGG - Chr4:90704870-90704889 MsG0480023873.01.T01:three_prime_UTR 35.0%
!! TGTCAGCTTTGAGTTATCTA+AGG - Chr4:90713552-90713571 MsG0480023873.01.T01:intron 35.0%
!! TTAGCTCGTGTTCCATTTTT+CGG + Chr4:90711045-90711064 None:intergenic 35.0%
!! TTTTGGGTGATCACAATCTT+CGG + Chr4:90709955-90709974 None:intergenic 35.0%
!!! CACGCTTTTTTGATTTCCTT+TGG + Chr4:90713371-90713390 None:intergenic 35.0%
AAAGCCAGATAAGGAGCAAT+TGG - Chr4:90713112-90713131 MsG0480023873.01.T01:intron 40.0%
AACTTCATCCATCAGGAGAT+TGG + Chr4:90707842-90707861 None:intergenic 40.0%
AAGCATTCTATCATGCCGTA+TGG - Chr4:90706407-90706426 MsG0480023873.01.T01:intron 40.0%
AAGGCAGTTGAAGGAGAAAA+TGG - Chr4:90712262-90712281 MsG0480023873.01.T01:intron 40.0%
AAGTGAGTGCATGTAAGTAG+GGG + Chr4:90705349-90705368 None:intergenic 40.0%
AATCAGACCTTTCCAGAAAG+CGG + Chr4:90705037-90705056 None:intergenic 40.0%
ACAAGTGAGTGCATGTAAGT+AGG + Chr4:90705351-90705370 None:intergenic 40.0%
ACTAATAGTCCATGGCTTCT+TGG + Chr4:90711197-90711216 None:intergenic 40.0%
AGGCAGTTGAAGGAGAAAAT+GGG - Chr4:90712263-90712282 MsG0480023873.01.T01:intron 40.0%
ATCGATCTACCAAACCATTC+TGG + Chr4:90704828-90704847 None:intergenic 40.0%
ATGTTGAGAAAGTGGTTTCC+AGG - Chr4:90712363-90712382 MsG0480023873.01.T01:intron 40.0%
ATTACTTGAACGTAAGCAGC+CGG - Chr4:90710258-90710277 MsG0480023873.01.T01:three_prime_UTR 40.0%
ATTCAATTGAGGCTGAAGAC+TGG - Chr4:90710961-90710980 MsG0480023873.01.T01:three_prime_UTR 40.0%
CAAACCAATTGCTCCTTATC+TGG + Chr4:90713119-90713138 None:intergenic 40.0%
CAAATCAGATGCAATGCTAG+TGG - Chr4:90710022-90710041 MsG0480023873.01.T01:intron 40.0%
CAAGTGAGTGCATGTAAGTA+GGG + Chr4:90705350-90705369 None:intergenic 40.0%
CACTAGCATTGCATCTGATT+TGG + Chr4:90710024-90710043 None:intergenic 40.0%
CAGTTATACCTCGTAGACAA+GGG + Chr4:90706477-90706496 None:intergenic 40.0%
CATGCACCAAGTTTCAAATG+AGG + Chr4:90710160-90710179 None:intergenic 40.0%
CCAAGTAAAGTTCCTATTGC+TGG - Chr4:90709020-90709039 MsG0480023873.01.T01:intron 40.0%
CCAGCAATAGGAACTTTACT+TGG + Chr4:90709023-90709042 None:intergenic 40.0%
CCCATGAATCACTGCTTAAT+AGG - Chr4:90706591-90706610 MsG0480023873.01.T01:intron 40.0%
CTAATAGTCCATGGCTTCTT+GGG + Chr4:90711196-90711215 None:intergenic 40.0%
CTCTTCAAGTCTTCGTATTG+TGG + Chr4:90707145-90707164 None:intergenic 40.0%
CTCTTCCTCTTTACCTTACA+CGG - Chr4:90713059-90713078 MsG0480023873.01.T01:intron 40.0%
CTGAGTACAATTTATGGGAG+TGG - Chr4:90708919-90708938 MsG0480023873.01.T01:intron 40.0%
CTGATGCAATTATAACCCTG+TGG - Chr4:90711940-90711959 MsG0480023873.01.T01:intron 40.0%
CTTATGCTTATGTCTATGGG+CGG + Chr4:90707969-90707988 None:intergenic 40.0%
GAAATTGCTCAACATTAGGG+TGG + Chr4:90706653-90706672 None:intergenic 40.0%
GAACTCAAAAGACCTACACA+TGG + Chr4:90710357-90710376 None:intergenic 40.0%
GAAGACAGATGGAGCAATAT+TGG + Chr4:90710380-90710399 None:intergenic 40.0%
GATATAGGAGGCTTCTATTG+TGG - Chr4:90710751-90710770 MsG0480023873.01.T01:intron 40.0%
GCCTATTAAGCAGTGATTCA+TGG + Chr4:90706595-90706614 None:intergenic 40.0%
GCTACTTGATCTAGCATGAA+AGG - Chr4:90705830-90705849 MsG0480023873.01.T01:intron 40.0%
GGATAGTTCCCTATAACCAT+AGG + Chr4:90710183-90710202 None:intergenic 40.0%
GGATGATCACAAGTTTCACA+AGG + Chr4:90706724-90706743 None:intergenic 40.0%
GTAAGGTAAAGAGGAAGAGA+GGG + Chr4:90713058-90713077 None:intergenic 40.0%
TAAATGTATGGACACGACTC+TGG + Chr4:90713853-90713872 None:intergenic 40.0%
TAAGGTAAAGAGGAAGAGAG+GGG + Chr4:90713057-90713076 None:intergenic 40.0%
TAGCTGACAATACTTCAACG+AGG + Chr4:90709170-90709189 None:intergenic 40.0%
TAGGTAGATGTTTCACCACA+GGG + Chr4:90711958-90711977 None:intergenic 40.0%
TAGTAACTCCCAGAATGGTT+TGG - Chr4:90704816-90704835 MsG0480023873.01.T01:three_prime_UTR 40.0%
TATCGTTTATGGCACTCCAA+AGG - Chr4:90713352-90713371 MsG0480023873.01.T01:intron 40.0%
TCGATCTACCAAACCATTCT+GGG + Chr4:90704827-90704846 None:intergenic 40.0%
TCTGTGATGATTGAGGAAAG+AGG - Chr4:90708195-90708214 MsG0480023873.01.T01:intron 40.0%
TCTTCCTCTTTACCTTACAC+GGG - Chr4:90713060-90713079 MsG0480023873.01.T01:intron 40.0%
TGCACTATCCATCTAACTCA+TGG - Chr4:90710913-90710932 MsG0480023873.01.T01:intron 40.0%
TGCTGCATTCTCAAAAAGGT+GGG - Chr4:90712576-90712595 MsG0480023873.01.T01:intron 40.0%
TGTAAGGTAAAGAGGAAGAG+AGG + Chr4:90713059-90713078 None:intergenic 40.0%
TGTGTAGATCAAGAAAAGGG+AGG - Chr4:90706362-90706381 MsG0480023873.01.T01:intron 40.0%
TGTTGAGAAAGTGGTTTCCA+GGG - Chr4:90712364-90712383 MsG0480023873.01.T01:intron 40.0%
TGTTGCGACTGTTTATGCAT+TGG - Chr4:90711875-90711894 MsG0480023873.01.T01:intron 40.0%
TTAAGCAGTGATTCATGGGA+TGG + Chr4:90706590-90706609 None:intergenic 40.0%
TTCAATTGAGGCTGAAGACT+GGG - Chr4:90710962-90710981 MsG0480023873.01.T01:three_prime_UTR 40.0%
TTCATACCCATCTCATCTCA+TGG + Chr4:90706212-90706231 None:intergenic 40.0%
TTGCTGCATTCTCAAAAAGG+TGG - Chr4:90712575-90712594 MsG0480023873.01.T01:intron 40.0%
TTTGATTACCAGACTGAGCA+CGG + Chr4:90707619-90707638 None:intergenic 40.0%
! ATGACTAGTGTGAGAGCATA+AGG + Chr4:90710216-90710235 None:intergenic 40.0%
! ATGCTTTGTTGTACATGCAG+GGG - Chr4:90708541-90708560 MsG0480023873.01.T01:intron 40.0%
! CCAATATGCTTTTCATACCG+TGG - Chr4:90711687-90711706 MsG0480023873.01.T01:CDS 40.0%
! CCACGGTATGAAAAGCATAT+TGG + Chr4:90711690-90711709 None:intergenic 40.0%
! GAGAAGACTTACTTCTGGTT+AGG + Chr4:90710619-90710638 None:intergenic 40.0%
! GATGCTTTGTTGTACATGCA+GGG - Chr4:90708540-90708559 MsG0480023873.01.T01:intron 40.0%
! GCTTGAGGAATTTAGAACAG+AGG - Chr4:90707095-90707114 MsG0480023873.01.T01:intron 40.0%
! TGATGCTTTGTTGTACATGC+AGG - Chr4:90708539-90708558 MsG0480023873.01.T01:intron 40.0%
! TGTCAAGTGAAGGCCTTTTA+AGG + Chr4:90706510-90706529 None:intergenic 40.0%
! TGTGTGCCTCATTTGAAACT+TGG - Chr4:90710151-90710170 MsG0480023873.01.T01:intron 40.0%
! TTCTACCTATTTGAAGCTCG+AGG - Chr4:90712792-90712811 MsG0480023873.01.T01:CDS 40.0%
!! AAAGGTATCGTCTTGCTTAC+TGG - Chr4:90707371-90707390 MsG0480023873.01.T01:intron 40.0%
!! AGAGGCGATTTCTAGTGTAA+AGG - Chr4:90713819-90713838 MsG0480023873.01.T01:CDS 40.0%
!! GATCATCCTAAAGGTGCTAT+AGG - Chr4:90706736-90706755 MsG0480023873.01.T01:three_prime_UTR 40.0%
ACAACACCTTCTTAGAACCC+TGG + Chr4:90712384-90712403 None:intergenic 45.0%
ACACGAGCTAACACAGTTGA+AGG - Chr4:90711054-90711073 MsG0480023873.01.T01:intron 45.0%
AGAACCATTGATCTTCCACG+TGG - Chr4:90713682-90713701 MsG0480023873.01.T01:intron 45.0%
AGCTGACATTCTGTAGAGAC+AGG + Chr4:90713540-90713559 None:intergenic 45.0%
AGGCACACAAAGTTAGCAAC+AGG + Chr4:90710140-90710159 None:intergenic 45.0%
AGGCATAGTAACTCCCAGAA+TGG - Chr4:90704811-90704830 MsG0480023873.01.T01:three_prime_UTR 45.0%
ATGGTCATACATTCAGGCAG+TGG - Chr4:90710932-90710951 MsG0480023873.01.T01:intron 45.0%
CCAGTTATACCTCGTAGACA+AGG + Chr4:90706478-90706497 None:intergenic 45.0%
CCTTGTCTACGAGGTATAAC+TGG - Chr4:90706475-90706494 MsG0480023873.01.T01:three_prime_UTR 45.0%
CGAGCACAAACAATGCTTCT+TGG - Chr4:90707865-90707884 MsG0480023873.01.T01:three_prime_UTR 45.0%
CGCTACGAGATTCACCAAAT+CGG + Chr4:90704887-90704906 None:intergenic 45.0%
CTCGTTCAACTTCATCCATC+AGG + Chr4:90707849-90707868 None:intergenic 45.0%
CTCTCTCTCTGTGATGATTG+AGG - Chr4:90708188-90708207 MsG0480023873.01.T01:intron 45.0%
CTGATAGATCCCAGTCATCA+AGG + Chr4:90711627-90711646 None:intergenic 45.0%
CTTCCTCTTTACCTTACACG+GGG - Chr4:90713061-90713080 MsG0480023873.01.T01:intron 45.0%
GAAGACTTGAAGAGCGAAGT+AGG - Chr4:90707151-90707170 MsG0480023873.01.T01:intron 45.0%
GAAGAGATGCTGTATCCCAT+TGG - Chr4:90711759-90711778 MsG0480023873.01.T01:CDS 45.0%
GACATCCTCGAGCTTCAAAT+AGG + Chr4:90712800-90712819 None:intergenic 45.0%
GGCAATGAAGAAAGAGCTTC+AGG - Chr4:90710772-90710791 MsG0480023873.01.T01:intron 45.0%
GGCAGTTGAAGGAGAAAATG+GGG - Chr4:90712264-90712283 MsG0480023873.01.T01:intron 45.0%
GGGATCTATCAGAGGCTAAT+CGG - Chr4:90711635-90711654 MsG0480023873.01.T01:intron 45.0%
GGGTATACATCTACTTCCAG+TGG - Chr4:90713713-90713732 MsG0480023873.01.T01:intron 45.0%
GGTATTTCGGAACCAGCAAT+AGG + Chr4:90709035-90709054 None:intergenic 45.0%
GGTGCATGCCTATGGTTATA+GGG - Chr4:90710172-90710191 MsG0480023873.01.T01:intron 45.0%
GTAAGCTTGATCACGATGCT+TGG + Chr4:90705266-90705285 None:intergenic 45.0%
GTAGGTAGATGTTTCACCAC+AGG + Chr4:90711959-90711978 None:intergenic 45.0%
GTGATGATTGAGGAAAGAGG+CGG - Chr4:90708198-90708217 MsG0480023873.01.T01:intron 45.0%
TCATGGCTCAGATGAAACAC+TGG - Chr4:90713651-90713670 MsG0480023873.01.T01:intron 45.0%
TGATGACTGGGATCTATCAG+AGG - Chr4:90711627-90711646 MsG0480023873.01.T01:intron 45.0%
TGATGATTGAGGAAAGAGGC+GGG - Chr4:90708199-90708218 MsG0480023873.01.T01:intron 45.0%
TGGTCATACATTCAGGCAGT+GGG - Chr4:90710933-90710952 MsG0480023873.01.T01:intron 45.0%
TGGTGCATGCCTATGGTTAT+AGG - Chr4:90710171-90710190 MsG0480023873.01.T01:intron 45.0%
TTCCTGATACCCCTTAAGCA+AGG + Chr4:90705923-90705942 None:intergenic 45.0%
TTTACCTTACACGGGGAGTA+TGG - Chr4:90713068-90713087 MsG0480023873.01.T01:intron 45.0%
TTTCAAGAAAGCTTCACCCG+AGG - Chr4:90705876-90705895 MsG0480023873.01.T01:intron 45.0%
TTTCTTTAGCACTCTGCAGC+TGG + Chr4:90707542-90707561 None:intergenic 45.0%
! AGATCGATTTAGGACACGCT+TGG - Chr4:90712096-90712115 MsG0480023873.01.T01:intron 45.0%
! GCAGTCAGAGAGATCGATTT+AGG - Chr4:90712086-90712105 MsG0480023873.01.T01:intron 45.0%
! TAAGCATCGCAATCTAGCAG+AGG - Chr4:90707319-90707338 MsG0480023873.01.T01:intron 45.0%
! TACAATCGGGTTGCATGTCT+TGG - Chr4:90713508-90713527 MsG0480023873.01.T01:intron 45.0%
! TGCTTTGTTGTACATGCAGG+GGG - Chr4:90708542-90708561 MsG0480023873.01.T01:intron 45.0%
!! AGGTTTTATGTTGGGGAGAG+CGG + Chr4:90710427-90710446 None:intergenic 45.0%
!! ATCTCGAGAGGTGTTATGGA+AGG + Chr4:90710302-90710321 None:intergenic 45.0%
!! ATGTTTCCACTTGGTGTGGT+TGG - Chr4:90709277-90709296 MsG0480023873.01.T01:intron 45.0%
!! TCTTGGTTTGGAGAGAGAGA+AGG - Chr4:90707882-90707901 MsG0480023873.01.T01:intron 45.0%
!! TGAAACTTGGTGCATGCCTA+TGG - Chr4:90710164-90710183 MsG0480023873.01.T01:intron 45.0%
!! TGGTTTCCAGGGTTCTAAGA+AGG - Chr4:90712375-90712394 MsG0480023873.01.T01:intron 45.0%
!!! GATATGTGGTGGGCTTTTAC+AGG - Chr4:90706853-90706872 MsG0480023873.01.T01:intron 45.0%
!!! GTACTGGGCTTTTAGCTTGA+AGG - Chr4:90710479-90710498 MsG0480023873.01.T01:intron 45.0%
!! TATTAAAATAAAAAATTTGA+TGG + Chr4:90712201-90712220 None:intergenic 5.0%
!!! AATTTTTTATTTTAATATGA+CGG - Chr4:90712204-90712223 MsG0480023873.01.T01:intron 5.0%
AAAATGGAGTCTCCGCCAAG+TGG - Chr4:90704971-90704990 MsG0480023873.01.T01:three_prime_UTR 50.0%
AAGTTCTGCCACCTTCTGCT+CGG + Chr4:90711389-90711408 None:intergenic 50.0%
ACAGGCGCACTAATAGTCCA+TGG + Chr4:90711205-90711224 None:intergenic 50.0%
ACATTAGGGTGGCAAGAAGC+TGG + Chr4:90706642-90706661 None:intergenic 50.0%
ACTCACGATACACGTGCTAG+AGG + Chr4:90706545-90706564 None:intergenic 50.0%
ACTCCCCGTGTAAGGTAAAG+AGG + Chr4:90713067-90713086 None:intergenic 50.0%
ACTGAGGCAAGAGCTGGATA+AGG + Chr4:90706030-90706049 None:intergenic 50.0%
AGAAGCTGGGGTGAGACATA+TGG + Chr4:90706628-90706647 None:intergenic 50.0%
AGCTTGATCACGATGCTTGG+AGG + Chr4:90705263-90705282 None:intergenic 50.0%
ATCAGAGGCTAATCGGAGTG+AGG - Chr4:90711642-90711661 MsG0480023873.01.T01:intron 50.0%
ATGAGTCCAACCACACCAAG+TGG + Chr4:90709286-90709305 None:intergenic 50.0%
ATGGAGCAGAGTAGAGGGTT+GGG - Chr4:90713087-90713106 MsG0480023873.01.T01:intron 50.0%
ATTAGGGTGGCAAGAAGCTG+GGG + Chr4:90706640-90706659 None:intergenic 50.0%
CAGTCCACGTGGAAGATCAA+TGG + Chr4:90713689-90713708 None:intergenic 50.0%
CATTAGGGTGGCAAGAAGCT+GGG + Chr4:90706641-90706660 None:intergenic 50.0%
CCGAGCTAGAATCTGAGAAC+CGG - Chr4:90707058-90707077 MsG0480023873.01.T01:intron 50.0%
CTGCGTATGACTTCTAGTCC+CGG - Chr4:90710671-90710690 MsG0480023873.01.T01:intron 50.0%
GACACACGCGAGAGATAAGT+AGG + Chr4:90713936-90713955 None:intergenic 50.0%
GACAGAATCACACTCAGCAG+CGG - Chr4:90713247-90713266 MsG0480023873.01.T01:intron 50.0%
GAGCACGGAGTTCAAACAAC+TGG + Chr4:90707604-90707623 None:intergenic 50.0%
GATCAAGAAAAGGGAGGCTG+AGG - Chr4:90706368-90706387 MsG0480023873.01.T01:intron 50.0%
GATGCTAGAGATGCTCAGCA+AGG + Chr4:90708813-90708832 None:intergenic 50.0%
GCAAGAGCTGGATAAGGATC+TGG + Chr4:90706024-90706043 None:intergenic 50.0%
GGAGTATGGAGCAGAGTAGA+GGG - Chr4:90713082-90713101 MsG0480023873.01.T01:intron 50.0%
GGTGGCAGAACTTTCAGCTA+AGG - Chr4:90711396-90711415 MsG0480023873.01.T01:intron 50.0%
GGTTGGGAGAAAGCCAGATA+AGG - Chr4:90713103-90713122 MsG0480023873.01.T01:intron 50.0%
GTTCATTGGATGTAGCTGCC+AGG + Chr4:90706692-90706711 None:intergenic 50.0%
TATACCCACTACAGTCCACG+TGG + Chr4:90713700-90713719 None:intergenic 50.0%
TATGGAGCAGAGTAGAGGGT+TGG - Chr4:90713086-90713105 MsG0480023873.01.T01:intron 50.0%
TCTATTCCTGTGCCAACACC+TGG - Chr4:90706671-90706690 MsG0480023873.01.T01:intron 50.0%
TGAGTGCATGTAAGTAGGGG+TGG + Chr4:90705346-90705365 None:intergenic 50.0%
TGTAGCTTCCCAAGAAGCCA+TGG - Chr4:90711185-90711204 MsG0480023873.01.T01:intron 50.0%
TTTCCAGAAAGCGGAGACGA+CGG + Chr4:90705028-90705047 None:intergenic 50.0%
TTTGAACTCCGTGCTCAGTC+TGG - Chr4:90707608-90707627 MsG0480023873.01.T01:intron 50.0%
! ATCTTCCACGTGGACTGTAG+TGG - Chr4:90713692-90713711 MsG0480023873.01.T01:intron 50.0%
! CCGGTTCTCAGATTCTAGCT+CGG + Chr4:90707061-90707080 None:intergenic 50.0%
! TAATCGGAGTGAGGTGTCTG+AGG - Chr4:90711651-90711670 MsG0480023873.01.T01:CDS 50.0%
! TCTTCCACGTGGACTGTAGT+GGG - Chr4:90713693-90713712 MsG0480023873.01.T01:intron 50.0%
!! ACTTGGTGTGGTTGGACTCA+TGG - Chr4:90709285-90709304 MsG0480023873.01.T01:intron 50.0%
!! GCTTAAGGGGTATCAGGAAG+AGG - Chr4:90705924-90705943 MsG0480023873.01.T01:intron 50.0%
!! TGCCTTGCTTAAGGGGTATC+AGG - Chr4:90705918-90705937 MsG0480023873.01.T01:intron 50.0%
AAAGCGGAGACGACGGAGAT+CGG + Chr4:90705021-90705040 None:intergenic 55.0%
ACACGCTTGGAGAGACCAAG+AGG - Chr4:90712109-90712128 MsG0480023873.01.T01:intron 55.0%
ACAGCAACTGAGGCAAGAGC+TGG + Chr4:90706036-90706055 None:intergenic 55.0%
ACTAGCTGCTCTACTGACGC+AGG - Chr4:90711565-90711584 MsG0480023873.01.T01:intron 55.0%
ACTCGAAACAGCCGAGCAGA+AGG - Chr4:90711375-90711394 MsG0480023873.01.T01:intron 55.0%
ACTGGGAAGTGGCCACAAGT+GGG - Chr4:90710979-90710998 MsG0480023873.01.T01:three_prime_UTR 55.0%
AGAAAAGGGAGGCTGAGGAG+AGG - Chr4:90706373-90706392 MsG0480023873.01.T01:intron 55.0%
AGCAGAGGCCAATCTCCTGA+TGG - Chr4:90707831-90707850 MsG0480023873.01.T01:three_prime_UTR 55.0%
CAGCAGCGGACGATTTCTCT+CGG - Chr4:90713261-90713280 MsG0480023873.01.T01:intron 55.0%
CATGTAAGTAGGGGTGGTCG+TGG + Chr4:90705340-90705359 None:intergenic 55.0%
CTAGCTGCTCTACTGACGCA+GGG - Chr4:90711566-90711585 MsG0480023873.01.T01:intron 55.0%
GCTGGAACTCACAGCAACTG+AGG + Chr4:90706046-90706065 None:intergenic 55.0%
GGCTCAGATGAAACACTGGC+TGG - Chr4:90713655-90713674 MsG0480023873.01.T01:intron 55.0%
GTGGGAGGAGATGAGCAAGA+TGG - Chr4:90710997-90711016 MsG0480023873.01.T01:three_prime_UTR 55.0%
TGAGGCTGAAGACTGGGAAG+TGG - Chr4:90710968-90710987 MsG0480023873.01.T01:three_prime_UTR 55.0%
TGCTCATCTCCTCCCACTTG+TGG + Chr4:90710994-90711013 None:intergenic 55.0%
TGCTCCATACTCCCCGTGTA+AGG + Chr4:90713075-90713094 None:intergenic 55.0%
TGGATGTAGCTGCCAGGTGT+TGG + Chr4:90706686-90706705 None:intergenic 55.0%
TTTGCAGGCCCTTGTCTACG+AGG - Chr4:90706466-90706485 MsG0480023873.01.T01:three_prime_UTR 55.0%
! GGGAGTATGGAGCAGAGTAG+AGG - Chr4:90713081-90713100 MsG0480023873.01.T01:intron 55.0%
! GTCGTCTCCGCTTTCTGGAA+AGG - Chr4:90705027-90705046 MsG0480023873.01.T01:three_prime_UTR 55.0%
AAGTAGGGGTGGTCGTGGTG+CGG + Chr4:90705335-90705354 None:intergenic 60.0%
AGACGACGGAGATCGGAGAG+TGG + Chr4:90705014-90705033 None:intergenic 60.0%
CGAAACAGCCGAGCAGAAGG+TGG - Chr4:90711378-90711397 MsG0480023873.01.T01:intron 60.0%
GACTGGGAAGTGGCCACAAG+TGG - Chr4:90710978-90710997 MsG0480023873.01.T01:three_prime_UTR 60.0%
GAGGGCAGCTAAGCAAGCAG+AGG - Chr4:90707816-90707835 MsG0480023873.01.T01:three_prime_UTR 60.0%
GGAGTCTCCGCCAAGTGGAT+CGG - Chr4:90704976-90704995 MsG0480023873.01.T01:three_prime_UTR 60.0%
GTGTCCCTCTCCGATCCACT+TGG + Chr4:90704989-90705008 None:intergenic 60.0%
TCCCTCTCCGATCCACTTGG+CGG + Chr4:90704986-90705005 None:intergenic 60.0%
TCCGCCAAGTGGATCGGAGA+GGG - Chr4:90704982-90705001 MsG0480023873.01.T01:three_prime_UTR 60.0%
TCTCCGTCGTCTCCGCTTTC+TGG - Chr4:90705022-90705041 MsG0480023873.01.T01:three_prime_UTR 60.0%
! GGTCGTGGTGCGGTTTGGAT+CGG + Chr4:90705325-90705344 None:intergenic 60.0%
!! TAGCTGCCAGGTGTTGGCAC+AGG + Chr4:90706680-90706699 None:intergenic 60.0%
CTCCGCCAAGTGGATCGGAG+AGG - Chr4:90704981-90705000 MsG0480023873.01.T01:three_prime_UTR 65.0%
GGGAAGTGGCCACAAGTGGG+AGG - Chr4:90710982-90711001 MsG0480023873.01.T01:three_prime_UTR 65.0%
GGGGTGGTCGTGGTGCGGTT+TGG + Chr4:90705330-90705349 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 90704771 90714069 90704771 ID=MsG0480023873.01;Name=MsG0480023873.01
Chr4 mRNA 90704771 90714069 90704771 ID=MsG0480023873.01.T01;Parent=MsG0480023873.01;Name=MsG0480023873.01.T01;_AED=0.33;_eAED=0.33;_QI=203|0.88|0.88|1|0.35|0.44|18|1786|172
Chr4 exon 90705551 90705627 90705551 ID=MsG0480023873.01.T01:exon:5058;Parent=MsG0480023873.01.T01
Chr4 exon 90706247 90706343 90706247 ID=MsG0480023873.01.T01:exon:5057;Parent=MsG0480023873.01.T01
Chr4 exon 90706444 90706583 90706444 ID=MsG0480023873.01.T01:exon:5056;Parent=MsG0480023873.01.T01
Chr4 exon 90706710 90706810 90706710 ID=MsG0480023873.01.T01:exon:5055;Parent=MsG0480023873.01.T01
Chr4 exon 90707372 90707491 90707372 ID=MsG0480023873.01.T01:exon:5053;Parent=MsG0480023873.01.T01
Chr4 exon 90707765 90707892 90707765 ID=MsG0480023873.01.T01:exon:5052;Parent=MsG0480023873.01.T01
Chr4 exon 90710937 90711031 90710937 ID=MsG0480023873.01.T01:exon:5048;Parent=MsG0480023873.01.T01
Chr4 exon 90711211 90711318 90711211 ID=MsG0480023873.01.T01:exon:5047;Parent=MsG0480023873.01.T01
Chr4 exon 90711465 90711553 90711465 ID=MsG0480023873.01.T01:exon:5046;Parent=MsG0480023873.01.T01
Chr4 exon 90711649 90711801 90711649 ID=MsG0480023873.01.T01:exon:5045;Parent=MsG0480023873.01.T01
Chr4 exon 90712787 90712996 90712787 ID=MsG0480023873.01.T01:exon:5044;Parent=MsG0480023873.01.T01
Chr4 exon 90713792 90714069 90713792 ID=MsG0480023873.01.T01:exon:5043;Parent=MsG0480023873.01.T01
Chr4 five_prime_UTR 90713867 90714069 90713867 ID=MsG0480023873.01.T01:five_prime_utr;Parent=MsG0480023873.01.T01
Chr4 CDS 90713792 90713866 90713792 ID=MsG0480023873.01.T01:cds;Parent=MsG0480023873.01.T01
Chr4 CDS 90712787 90712996 90712787 ID=MsG0480023873.01.T01:cds;Parent=MsG0480023873.01.T01
Chr4 CDS 90711649 90711801 90711649 ID=MsG0480023873.01.T01:cds;Parent=MsG0480023873.01.T01
Chr4 CDS 90711473 90711553 90711473 ID=MsG0480023873.01.T01:cds;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90711465 90711472 90711465 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90711211 90711318 90711211 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90710937 90711031 90710937 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90710224 90710279 90710224 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90709056 90709221 90709056 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90707990 90708082 90707990 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90707765 90707892 90707765 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90707372 90707491 90707372 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90707168 90707253 90707168 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90706710 90706810 90706710 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90706444 90706583 90706444 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90706247 90706343 90706247 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90705551 90705627 90705551 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90705267 90705358 90705267 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 three_prime_UTR 90704771 90705189 90704771 ID=MsG0480023873.01.T01:three_prime_utr;Parent=MsG0480023873.01.T01
Chr4 mRNA 90704771 90711044 90704771 ID=MsG0480023873.01.T02;Parent=MsG0480023873.01;Name=MsG0480023873.01.T02;_AED=0.42;_eAED=0.42;_QI=0|0.62|0.66|1|0.87|0.88|9|358|288
Chr4 exon 90705558 90705627 90705558 ID=MsG0480023873.01.T02:exon:5063;Parent=MsG0480023873.01.T02
Chr4 exon 90707372 90707506 90707372 ID=MsG0480023873.01.T02:exon:5062;Parent=MsG0480023873.01.T02
Chr4 exon 90710937 90711044 90710937 ID=MsG0480023873.01.T02:exon:5061;Parent=MsG0480023873.01.T02
Chr4 CDS 90710937 90711044 90710937 ID=MsG0480023873.01.T02:cds;Parent=MsG0480023873.01.T02
Chr4 CDS 90710224 90710279 90710224 ID=MsG0480023873.01.T02:cds;Parent=MsG0480023873.01.T02
Chr4 CDS 90709056 90709221 90709056 ID=MsG0480023873.01.T02:cds;Parent=MsG0480023873.01.T02
Chr4 CDS 90707990 90708082 90707990 ID=MsG0480023873.01.T02:cds;Parent=MsG0480023873.01.T02
Chr4 CDS 90707372 90707506 90707372 ID=MsG0480023873.01.T02:cds;Parent=MsG0480023873.01.T02
Chr4 CDS 90707168 90707253 90707168 ID=MsG0480023873.01.T02:cds;Parent=MsG0480023873.01.T02
Chr4 CDS 90705558 90705627 90705558 ID=MsG0480023873.01.T02:cds;Parent=MsG0480023873.01.T02
Chr4 CDS 90705267 90705358 90705267 ID=MsG0480023873.01.T02:cds;Parent=MsG0480023873.01.T02
Chr4 CDS 90705129 90705189 90705129 ID=MsG0480023873.01.T02:cds;Parent=MsG0480023873.01.T02
Chr4 three_prime_UTR 90704771 90705128 90704771 ID=MsG0480023873.01.T02:three_prime_utr;Parent=MsG0480023873.01.T02
Gene Sequence

>MsG0480023873.01.T01

ATGGAGTCTCCGCCAAGTGGATCGGAGAGGGACACAACCACTCTCCGATCTCCGTCGTCTCCGCTTTCTGGAAAGCATGAAAGGTCACGAATTATAATGTATACAGATTTCAAGAAAGCTTCACCCGAGGATAAGTCAAGTTTGTTTAATGCCTTGCTTAAGGGGTATCAGGAAGAGGTTGATAATCTTACAAAAAGAGCAAAGTTTGGAGAAAATGCTTTCCTTAACATCTATCAAAAGCTGTATGAAGCTCCAGATCCTTATCCAGCTCTTGCCTCAGTTGCTGAGCAAGATCTCAAGCTGTCCGAGCTAGAATCTGAGAACCGGAAAATGAAAGTTGAGCTTGAGGAATTTAGAACAGAGGCAACTCACTTGAAGAATCAACAGGCCACAATACGAAGACTTGAAGAGCGAAGTAGGCAATTAGAGCAACAGTTTATGGAAGAGAAAGTAAAAGAAATTGTGGAGATTAAGCATCGCAATCTAGCAGAGGAGAACCAGAAAACATTAGAAATTTAA

>MsG0480023873.01.T02

ATGATATTTTCAGAGGAAGAGAGGGCAGCTAAGCAAGCAGAGGCCAATCTCCTGATGGATGAAGTTGAACGAGCACAAACAATGCTTCTTGGTTTGGAGAGAGAGAAGGGGGTACTTCGATCTCAGTTGCAAACAGCAAATGAAGATTCTGAAACTAAGAAGAGTGATAATTTAGACTCAAATAATGCACTTGAGAATTCTTTAATTGCCAAAGAGAAGTTAATCTCTGAATTGAACATGGAGCTACACAATATTGAAACAACCTTATCAAATGAACGTGAAGAACACATTAATGATGTGAAAAAATTCACTGCAATGCTTAATGAAAAGGAGGCTTCTATTGTGGCAATGAAGAAAGAGCTTCAGGCAAGACCAACTGAAAAAATAGTTGATGATTTGCGCAAGAAAGTAAAAATTTTGCAGTTCTACTGTTTTCAGGTCAAACTTTCTGAAAAAACATCTTCACTCGAAACAGCCGAGCAGAAGGTGGCAGAACTTTCAGCTAAGGTTAATGAACAACAAAAACTGATACAAAAGTTGGAAGATGATATATCCAAGGGATATAATTCCAGTTCCAAAGATCATAAAGAACTTTCCTTGATGACTGGGATCTATCAGAGGCTAATCGGAGTGAGGTGTCTGAGGAAAGAGATCAAAGATACAAGGATTGGATTCAGGGACAGAATCACACTCAGCAGCGGACGATTTCTCTCGGTATGCCCGAACTTTGCATTCTTTTATACAATCGGGTTGCATGTCTTGGTCTTTACCTGTCTCTACAGAATGTCAGCTTTGAGTTATCTAAGTCATGGCTCAGATGAAACACTGGCTGGAGAGAGAACCATTGATCTTCCACGTGGACTGTAG

Protein sequence

>MsG0480023873.01.T01

MESPPSGSERDTTTLRSPSSPLSGKHERSRIIMYTDFKKASPEDKSSLFNALLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALASVAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRLEERSRQLEQQFMEEKVKEIVEIKHRNLAEENQKTLEI*

>MsG0480023873.01.T02

MIFSEEERAAKQAEANLLMDEVERAQTMLLGLEREKGVLRSQLQTANEDSETKKSDNLDSNNALENSLIAKEKLISELNMELHNIETTLSNEREEHINDVKKFTAMLNEKEASIVAMKKELQARPTEKIVDDLRKKVKILQFYCFQVKLSEKTSSLETAEQKVAELSAKVNEQQKLIQKLEDDISKGYNSSSKDHKELSLMTGIYQRLIGVRCLRKEIKDTRIGFRDRITLSSGRFLSVCPNFAFFYTIGLHVLVFTCLYRMSALSYLSHGSDETLAGERTIDLPRGL*