Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005954.01.T01 | XP_024627509.1 | 77.122 | 271 | 33 | 5 | 4 | 259 | 185 | 441 | 6.27E-131 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005954.01.T01 | Q7Z877 | 33.086 | 269 | 143 | 10 | 9 | 258 | 326 | 576 | 8.95E-38 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005954.01.T01 | A0A072VRY2 | 77.122 | 271 | 33 | 5 | 4 | 259 | 185 | 441 | 3.00e-131 | 387 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0180005954.01 | 0.832164 | 1.105012e-55 | 1.225022e-52 |
| MsG0080048462.01 | MsG0180005954.01 | 0.813736 | 2.201022e-51 | 1.449042e-48 |
| MsG0080048804.01 | MsG0180005954.01 | 0.816675 | 4.894417e-52 | 3.490557e-49 |
| MsG0080048855.01 | MsG0180005954.01 | 0.827752 | 1.315433e-54 | 1.281501e-51 |
| MsG0180000145.01 | MsG0180005954.01 | 0.824361 | 8.414476e-54 | 7.436623e-51 |
| MsG0180000195.01 | MsG0180005954.01 | 0.840809 | 6.951594e-58 | 1.001711e-54 |
| MsG0180000334.01 | MsG0180005954.01 | 0.816024 | 6.842625e-52 | 4.794143e-49 |
| MsG0180000335.01 | MsG0180005954.01 | 0.819404 | 1.182304e-52 | 9.089501e-50 |
| MsG0180000470.01 | MsG0180005954.01 | 0.807694 | 4.460646e-50 | 2.500992e-47 |
| MsG0180000607.01 | MsG0180005954.01 | 0.800290 | 1.544773e-48 | 7.166082e-46 |
| MsG0180001687.01 | MsG0180005954.01 | 0.808945 | 2.412822e-50 | 1.398053e-47 |
| MsG0180002482.01 | MsG0180005954.01 | 0.820454 | 6.801420e-53 | 5.384216e-50 |
| MsG0180002492.01 | MsG0180005954.01 | 0.800273 | 1.557113e-48 | 7.220058e-46 |
| MsG0180002895.01 | MsG0180005954.01 | 0.806728 | 7.145964e-50 | 3.907497e-47 |
| MsG0180003669.01 | MsG0180005954.01 | 0.834594 | 2.738522e-56 | 3.265040e-53 |
| MsG0180003786.01 | MsG0180005954.01 | 0.813710 | 2.230617e-51 | 1.467508e-48 |
| MsG0180003864.01 | MsG0180005954.01 | 0.813945 | 1.979029e-51 | 1.310234e-48 |
| MsG0180004050.01 | MsG0180005954.01 | 0.803250 | 3.812703e-49 | 1.906719e-46 |
| MsG0180004148.01 | MsG0180005954.01 | 0.811997 | 5.290849e-51 | 3.324035e-48 |
| MsG0180004152.01 | MsG0180005954.01 | 0.807945 | 3.944294e-50 | 2.226118e-47 |
| MsG0180004259.01 | MsG0180005954.01 | 0.814725 | 1.330940e-51 | 9.000074e-49 |
| MsG0180004264.01 | MsG0180005954.01 | 0.811996 | 5.292946e-51 | 3.325285e-48 |
| MsG0180004389.01 | MsG0180005954.01 | 0.865430 | 5.940353e-65 | 1.931997e-61 |
| MsG0180004426.01 | MsG0180005954.01 | 0.804989 | 1.657435e-49 | 8.668207e-47 |
| MsG0180004463.01 | MsG0180005954.01 | 0.802967 | 4.363620e-49 | 2.166453e-46 |
| MsG0180004481.01 | MsG0180005954.01 | 0.805416 | 1.348857e-49 | 7.132158e-47 |
| MsG0180004509.01 | MsG0180005954.01 | 0.804049 | 2.603460e-49 | 1.329011e-46 |
| MsG0180004779.01 | MsG0180005954.01 | 0.831041 | 2.089892e-55 | 2.241271e-52 |
| MsG0180004996.01 | MsG0180005954.01 | 0.808088 | 3.677974e-50 | 2.083681e-47 |
| MsG0180005050.01 | MsG0180005954.01 | 0.818306 | 2.100166e-52 | 1.566314e-49 |
| MsG0180005250.01 | MsG0180005954.01 | 0.802745 | 4.850167e-49 | 2.394536e-46 |
| MsG0180005575.01 | MsG0180005954.01 | 0.836327 | 9.988356e-57 | 1.254718e-53 |
| MsG0180005664.01 | MsG0180005954.01 | 0.832685 | 8.209832e-56 | 9.244094e-53 |
| MsG0180005842.01 | MsG0180005954.01 | 0.810413 | 1.167248e-50 | 7.031069e-48 |
| MsG0180005954.01 | MsG0180005993.01 | 0.852844 | 3.535950e-61 | 7.488236e-58 |
| MsG0180005954.01 | MsG0180006224.01 | 0.832626 | 8.492238e-56 | 9.545129e-53 |
| MsG0180005954.01 | MsG0180006261.01 | 0.834531 | 2.839806e-56 | 3.379692e-53 |
| MsG0180005954.01 | MsG0280006299.01 | 0.835352 | 1.763636e-56 | 2.151333e-53 |
| MsG0180005954.01 | MsG0280006324.01 | 0.825139 | 5.517125e-54 | 4.986483e-51 |
| MsG0180005954.01 | MsG0280006422.01 | 0.832192 | 1.087302e-55 | 1.206431e-52 |
| MsG0180005954.01 | MsG0280006483.01 | 0.806163 | 9.398648e-50 | 5.065881e-47 |
| MsG0180005954.01 | MsG0280006712.01 | 0.800178 | 1.627700e-48 | 7.529087e-46 |
| MsG0180005954.01 | MsG0280007088.01 | 0.819401 | 1.183908e-52 | 9.100934e-50 |
| MsG0180005954.01 | MsG0280007101.01 | 0.849239 | 3.673230e-60 | 6.920204e-57 |
| MsG0180005954.01 | MsG0280007153.01 | 0.802427 | 5.640075e-49 | 2.762142e-46 |
| MsG0180005954.01 | MsG0280007222.01 | 0.802612 | 5.165566e-49 | 2.541595e-46 |
| MsG0180005954.01 | MsG0280007727.01 | 0.819462 | 1.146923e-52 | 8.832136e-50 |
| MsG0180005954.01 | MsG0280007955.01 | 0.812942 | 3.288148e-51 | 2.118542e-48 |
| MsG0180005954.01 | MsG0280008615.01 | 0.820741 | 5.842830e-53 | 4.662021e-50 |
| MsG0180005954.01 | MsG0280008696.01 | 0.813837 | 2.090862e-51 | 1.380245e-48 |
| MsG0180005954.01 | MsG0280008885.01 | 0.801974 | 6.988505e-49 | 3.382921e-46 |
| MsG0180005954.01 | MsG0280008971.01 | 0.810249 | 1.266163e-50 | 7.594385e-48 |
| MsG0180005954.01 | MsG0280009024.01 | 0.801600 | 8.340137e-49 | 3.999040e-46 |
| MsG0180005954.01 | MsG0280009109.01 | 0.807857 | 4.117655e-50 | 2.318531e-47 |
| MsG0180005954.01 | MsG0280009140.01 | 0.807416 | 5.108110e-50 | 2.843554e-47 |
| MsG0180005954.01 | MsG0280009514.01 | 0.806571 | 7.709925e-50 | 4.198980e-47 |
| MsG0180005954.01 | MsG0280009739.01 | 0.809491 | 1.843457e-50 | 1.083848e-47 |
| MsG0180005954.01 | MsG0280009748.01 | 0.811825 | 5.769077e-51 | 3.607696e-48 |
| MsG0180005954.01 | MsG0280010015.01 | 0.851276 | 9.864404e-61 | 1.986137e-57 |
| MsG0180005954.01 | MsG0280010233.01 | 0.811882 | 5.603924e-51 | 3.509761e-48 |
| MsG0180005954.01 | MsG0280010389.01 | 0.813051 | 3.112286e-51 | 2.011130e-48 |
| MsG0180005954.01 | MsG0280010443.01 | 0.804622 | 1.977476e-49 | 1.024413e-46 |
| MsG0180005954.01 | MsG0280010698.01 | 0.818008 | 2.451836e-52 | 1.813667e-49 |
| MsG0180005954.01 | MsG0280011014.01 | 0.819768 | 9.765082e-53 | 7.584434e-50 |
| MsG0180005954.01 | MsG0280011070.01 | 0.810484 | 1.126611e-50 | 6.799305e-48 |
| MsG0180005954.01 | MsG0280011086.01 | 0.857304 | 1.788693e-62 | 4.394502e-59 |
| MsG0180005954.01 | MsG0280011093.01 | 0.814206 | 1.733508e-51 | 1.155830e-48 |
| MsG0180005954.01 | MsG0280011156.01 | 0.844901 | 5.674324e-59 | 9.294881e-56 |
| MsG0180005954.01 | MsG0280011339.01 | 0.811659 | 6.267787e-51 | 3.902231e-48 |
| MsG0180005954.01 | MsG0280011388.01 | 0.858149 | 1.004595e-62 | 2.539135e-59 |
| MsG0180005954.01 | MsG0380011494.01 | 0.803840 | 2.877432e-49 | 1.461020e-46 |
| MsG0180005954.01 | MsG0380011609.01 | 0.822249 | 2.620207e-53 | 2.181337e-50 |
| MsG0180005954.01 | MsG0380011755.01 | 0.808666 | 2.768449e-50 | 1.592341e-47 |
| MsG0180005954.01 | MsG0380012471.01 | 0.873858 | 1.061710e-67 | 4.677252e-64 |
| MsG0180005954.01 | MsG0380013834.01 | 0.810059 | 1.391490e-50 | 8.304906e-48 |
| MsG0180005954.01 | MsG0380014173.01 | 0.824452 | 8.010856e-54 | 7.098106e-51 |
| MsG0180005954.01 | MsG0380014365.01 | 0.814059 | 1.868322e-51 | 1.240796e-48 |
| MsG0180005954.01 | MsG0380014537.01 | 0.831151 | 1.964326e-55 | 2.113484e-52 |
| MsG0180005954.01 | MsG0380014573.01 | 0.815932 | 7.176242e-52 | 5.014897e-49 |
| MsG0180005954.01 | MsG0380014647.01 | 0.869939 | 2.126183e-66 | 8.122583e-63 |
| MsG0180005954.01 | MsG0380015027.01 | 0.806467 | 8.111561e-50 | 4.406043e-47 |
| MsG0180005954.01 | MsG0380015164.01 | 0.816516 | 5.311987e-52 | 3.771930e-49 |
| MsG0180005954.01 | MsG0380015332.01 | 0.807904 | 4.024758e-50 | 2.268934e-47 |
| MsG0180005954.01 | MsG0380015555.01 | 0.834531 | 2.839806e-56 | 3.379692e-53 |
| MsG0180005954.01 | MsG0380015564.01 | 0.833575 | 4.928272e-56 | 5.698692e-53 |
| MsG0180005954.01 | MsG0380015566.01 | 0.862953 | 3.515503e-64 | 1.048103e-60 |
| MsG0180005954.01 | MsG0380015631.01 | 0.808662 | 2.774072e-50 | 1.595368e-47 |
| MsG0180005954.01 | MsG0380015720.01 | 0.836054 | 1.171569e-56 | 1.459496e-53 |
| MsG0180005954.01 | MsG0380016064.01 | 0.809679 | 1.679697e-50 | 9.925625e-48 |
| MsG0180005954.01 | MsG0380016131.01 | 0.804742 | 1.867097e-49 | 9.703299e-47 |
| MsG0180005954.01 | MsG0380016603.01 | 0.829468 | 5.061135e-55 | 5.184414e-52 |
| MsG0180005954.01 | MsG0380016860.01 | 0.818442 | 1.956332e-52 | 1.464676e-49 |
| MsG0180005954.01 | MsG0380016886.01 | 0.801856 | 7.392360e-49 | 3.567920e-46 |
| MsG0180005954.01 | MsG0380016910.01 | 0.834603 | 2.724256e-56 | 3.248994e-53 |
| MsG0180005954.01 | MsG0380016919.01 | 0.808520 | 2.974689e-50 | 1.704528e-47 |
| MsG0180005954.01 | MsG0380016920.01 | 0.813273 | 2.782510e-51 | 1.808886e-48 |
| MsG0180005954.01 | MsG0380016970.01 | 0.829778 | 4.254864e-55 | 4.398783e-52 |
| MsG0180005954.01 | MsG0380017998.01 | 0.803865 | 2.842971e-49 | 1.444477e-46 |
| MsG0180005954.01 | MsG0480018163.01 | 0.827802 | 1.279265e-54 | 1.248042e-51 |
| MsG0180005954.01 | MsG0480018206.01 | 0.803736 | 3.023056e-49 | 1.530876e-46 |
| MsG0180005954.01 | MsG0480018894.01 | 0.854140 | 1.500932e-61 | 3.319997e-58 |
| MsG0180005954.01 | MsG0480020090.01 | 0.835791 | 1.366222e-56 | 1.688408e-53 |
| MsG0180005954.01 | MsG0480020839.01 | 0.803705 | 3.068559e-49 | 1.552585e-46 |
| MsG0180005954.01 | MsG0480020874.01 | 0.830429 | 2.951842e-55 | 3.109143e-52 |
| MsG0180005954.01 | MsG0480020907.01 | 0.806414 | 8.322605e-50 | 4.514402e-47 |
| MsG0180005954.01 | MsG0480021215.01 | 0.828558 | 8.410876e-55 | 8.389360e-52 |
| MsG0180005954.01 | MsG0480021274.01 | 0.814103 | 1.827289e-51 | 1.214953e-48 |
| MsG0180005954.01 | MsG0480021448.01 | 0.810958 | 8.897128e-51 | 5.438576e-48 |
| MsG0180005954.01 | MsG0480021451.01 | 0.820950 | 5.230702e-53 | 4.198476e-50 |
| MsG0180005954.01 | MsG0480021452.01 | 0.821047 | 4.967979e-53 | 3.998509e-50 |
| MsG0180005954.01 | MsG0480021453.01 | 0.823923 | 1.066472e-53 | 9.309647e-51 |
| MsG0180005954.01 | MsG0480021464.01 | 0.820634 | 6.182531e-53 | 4.918189e-50 |
| MsG0180005954.01 | MsG0480021465.01 | 0.803306 | 3.713292e-49 | 1.859602e-46 |
| MsG0180005954.01 | MsG0480021491.01 | 0.814827 | 1.263434e-51 | 8.566764e-49 |
| MsG0180005954.01 | MsG0480021558.01 | 0.862579 | 4.585267e-64 | 1.349410e-60 |
| MsG0180005954.01 | MsG0480021953.01 | 0.810391 | 1.179735e-50 | 7.102156e-48 |
| MsG0180005954.01 | MsG0480022052.01 | -0.845072 | 5.101864e-59 | 8.403281e-56 |
| MsG0180005954.01 | MsG0480022146.01 | 0.815073 | 1.114484e-51 | 7.606996e-49 |
| MsG0180005954.01 | MsG0480022164.01 | 0.863801 | 1.920428e-64 | 5.896546e-61 |
| MsG0180005954.01 | MsG0480022222.01 | 0.814957 | 1.182636e-51 | 8.046966e-49 |
| MsG0180005954.01 | MsG0480022696.01 | 0.819354 | 1.214021e-52 | 9.319436e-50 |
| MsG0180005954.01 | MsG0480022707.01 | 0.819340 | 1.222484e-52 | 9.380814e-50 |
| MsG0180005954.01 | MsG0480022768.01 | 0.833433 | 5.348197e-56 | 6.158232e-53 |
| MsG0180005954.01 | MsG0480022795.01 | 0.864544 | 1.126507e-64 | 3.549867e-61 |
| MsG0180005954.01 | MsG0480022836.01 | 0.819798 | 9.611012e-53 | 7.471145e-50 |
| MsG0180005954.01 | MsG0480022855.01 | 0.814252 | 1.693994e-51 | 1.130914e-48 |
| MsG0180005954.01 | MsG0480023014.01 | 0.814069 | 1.858783e-51 | 1.234825e-48 |
| MsG0180005954.01 | MsG0480023463.01 | 0.819390 | 1.190972e-52 | 9.152074e-50 |
| MsG0180005954.01 | MsG0480023535.01 | 0.819491 | 1.129608e-52 | 8.705663e-50 |
| MsG0180005954.01 | MsG0480023600.01 | 0.845356 | 4.273294e-59 | 7.102872e-56 |
| MsG0180005954.01 | MsG0480023636.01 | 0.824487 | 7.859569e-54 | 6.971471e-51 |
| MsG0180005954.01 | MsG0480023707.01 | 0.825638 | 4.202365e-54 | 3.852277e-51 |
| MsG0180005954.01 | MsG0580024981.01 | 0.840369 | 9.066713e-58 | 1.288732e-54 |
| MsG0180005954.01 | MsG0580025022.01 | 0.807333 | 5.321170e-50 | 2.955760e-47 |
| MsG0180005954.01 | MsG0580025029.01 | 0.807563 | 4.756220e-50 | 2.657622e-47 |
| MsG0180005954.01 | MsG0580025135.01 | 0.801338 | 9.440911e-49 | 4.497259e-46 |
| MsG0180005954.01 | MsG0580025758.01 | 0.826939 | 2.059551e-54 | 1.959583e-51 |
| MsG0180005954.01 | MsG0580026002.01 | 0.814696 | 1.350573e-51 | 9.125656e-49 |
| MsG0180005954.01 | MsG0580026059.01 | 0.815537 | 8.785379e-52 | 6.073693e-49 |
| MsG0180005954.01 | MsG0580027031.01 | 0.841473 | 4.650786e-58 | 6.841755e-55 |
| MsG0180005954.01 | MsG0580027320.01 | 0.825344 | 4.935101e-54 | 4.486157e-51 |
| MsG0180005954.01 | MsG0580027431.01 | 0.827062 | 1.924903e-54 | 1.838015e-51 |
| MsG0180005954.01 | MsG0580027616.01 | 0.804603 | 1.995761e-49 | 1.033404e-46 |
| MsG0180005954.01 | MsG0580028394.01 | 0.808939 | 2.420768e-50 | 1.402394e-47 |
| MsG0180005954.01 | MsG0580028991.01 | 0.800640 | 1.310737e-48 | 6.134574e-46 |
| MsG0180005954.01 | MsG0580029189.01 | 0.805776 | 1.133595e-49 | 6.049934e-47 |
| MsG0180005954.01 | MsG0580029729.01 | 0.836704 | 8.008314e-57 | 1.017286e-53 |
| MsG0180005954.01 | MsG0680030413.01 | 0.802593 | 5.212856e-49 | 2.563635e-46 |
| MsG0180005954.01 | MsG0680030918.01 | 0.806914 | 6.526516e-50 | 3.585998e-47 |
| MsG0180005954.01 | MsG0680031506.01 | 0.835305 | 1.813416e-56 | 2.208973e-53 |
| MsG0180005954.01 | MsG0680031507.01 | 0.804131 | 2.503349e-49 | 1.280558e-46 |
| MsG0180005954.01 | MsG0680031549.01 | 0.835019 | 2.141069e-56 | 2.585342e-53 |
| MsG0180005954.01 | MsG0680031617.01 | 0.812462 | 4.188397e-51 | 2.664920e-48 |
| MsG0180005954.01 | MsG0680031628.01 | 0.803291 | 3.739318e-49 | 1.871951e-46 |
| MsG0180005954.01 | MsG0680031646.01 | 0.804511 | 2.085731e-49 | 1.077390e-46 |
| MsG0180005954.01 | MsG0680031924.01 | 0.811035 | 8.560797e-51 | 5.243438e-48 |
| MsG0180005954.01 | MsG0680033792.01 | 0.814458 | 1.525036e-51 | 1.023843e-48 |
| MsG0180005954.01 | MsG0680035346.01 | 0.837380 | 5.377344e-57 | 6.972085e-54 |
| MsG0180005954.01 | MsG0680035475.01 | 0.807997 | 3.845134e-50 | 2.173166e-47 |
| MsG0180005954.01 | MsG0680035573.01 | 0.800561 | 1.360206e-48 | 6.353282e-46 |
| MsG0180005954.01 | MsG0680035692.01 | 0.829659 | 4.547516e-55 | 4.684649e-52 |
| MsG0180005954.01 | MsG0680035876.01 | 0.830888 | 2.278963e-55 | 2.433113e-52 |
| MsG0180005954.01 | MsG0780035979.01 | 0.809966 | 1.457123e-50 | 8.675485e-48 |
| MsG0180005954.01 | MsG0780036340.01 | 0.820900 | 5.371202e-53 | 4.305028e-50 |
| MsG0180005954.01 | MsG0780036477.01 | 0.847486 | 1.121479e-59 | 1.996513e-56 |
| MsG0180005954.01 | MsG0780036719.01 | 0.810879 | 9.253562e-51 | 5.644348e-48 |
| MsG0180005954.01 | MsG0780036810.01 | 0.815860 | 7.445836e-52 | 5.192997e-49 |
| MsG0180005954.01 | MsG0780036815.01 | 0.826929 | 2.071499e-54 | 1.970393e-51 |
| MsG0180005954.01 | MsG0780037918.01 | 0.857873 | 1.213225e-62 | 3.038157e-59 |
| MsG0180005954.01 | MsG0780037942.01 | 0.870175 | 1.779323e-66 | 6.856708e-63 |
| MsG0180005954.01 | MsG0780038401.01 | 0.814151 | 1.783040e-51 | 1.187116e-48 |
| MsG0180005954.01 | MsG0780038603.01 | 0.841968 | 3.442925e-58 | 5.143430e-55 |
| MsG0180005954.01 | MsG0780039137.01 | 0.859328 | 4.462966e-63 | 1.174276e-59 |
| MsG0180005954.01 | MsG0780039144.01 | 0.813380 | 2.635853e-51 | 1.718674e-48 |
| MsG0180005954.01 | MsG0780039243.01 | 0.819835 | 9.428046e-53 | 7.336097e-50 |
| MsG0180005954.01 | MsG0780039423.01 | 0.802901 | 4.502832e-49 | 2.231898e-46 |
| MsG0180005954.01 | MsG0780039844.01 | 0.803088 | 4.119562e-49 | 2.051523e-46 |
| MsG0180005954.01 | MsG0780039866.01 | 0.815121 | 1.087547e-51 | 7.432746e-49 |
| MsG0180005954.01 | MsG0780040044.01 | 0.800220 | 1.596350e-48 | 7.391980e-46 |
| MsG0180005954.01 | MsG0780040057.01 | 0.845929 | 2.987699e-59 | 5.058929e-56 |
| MsG0180005954.01 | MsG0780040162.01 | 0.873190 | 1.781033e-67 | 7.661080e-64 |
| MsG0180005954.01 | MsG0780040529.01 | 0.822108 | 2.825613e-53 | 2.342794e-50 |
| MsG0180005954.01 | MsG0780040841.01 | 0.822153 | 2.758859e-53 | 2.290371e-50 |
| MsG0180005954.01 | MsG0780040858.01 | 0.805131 | 1.548272e-49 | 8.126870e-47 |
| MsG0180005954.01 | MsG0780040926.01 | 0.833779 | 4.383571e-56 | 5.100234e-53 |
| MsG0180005954.01 | MsG0780041065.01 | 0.802872 | 4.564197e-49 | 2.260668e-46 |
| MsG0180005954.01 | MsG0780041134.01 | 0.803682 | 3.102359e-49 | 1.568782e-46 |
| MsG0180005954.01 | MsG0780041402.01 | 0.824100 | 9.689571e-54 | 8.500154e-51 |
| MsG0180005954.01 | MsG0780041456.01 | 0.834588 | 2.748189e-56 | 3.276129e-53 |
| MsG0180005954.01 | MsG0780041559.01 | 0.855004 | 8.438323e-62 | 1.920215e-58 |
| MsG0180005954.01 | MsG0780041796.01 | 0.825870 | 3.702663e-54 | 3.416918e-51 |
| MsG0180005954.01 | MsG0880041836.01 | 0.821459 | 3.993242e-53 | 3.250530e-50 |
| MsG0180005954.01 | MsG0880042232.01 | 0.810317 | 1.224108e-50 | 7.355037e-48 |
| MsG0180005954.01 | MsG0880042518.01 | 0.828601 | 8.213295e-55 | 8.202309e-52 |
| MsG0180005954.01 | MsG0880042519.01 | 0.809856 | 1.538629e-50 | 9.134313e-48 |
| MsG0180005954.01 | MsG0880042779.01 | 0.877707 | 5.064528e-69 | 2.572190e-65 |
| MsG0180005954.01 | MsG0880043309.01 | 0.809080 | 2.257744e-50 | 1.312978e-47 |
| MsG0180005954.01 | MsG0880043465.01 | 0.827939 | 1.185504e-54 | 1.161351e-51 |
| MsG0180005954.01 | MsG0880043614.01 | 0.813424 | 2.577709e-51 | 1.682729e-48 |
| MsG0180005954.01 | MsG0880044415.01 | 0.878129 | 3.605625e-69 | 1.860453e-65 |
| MsG0180005954.01 | MsG0880044416.01 | 0.822640 | 2.125816e-53 | 1.789698e-50 |
| MsG0180005954.01 | MsG0880044510.01 | 0.840030 | 1.111261e-57 | 1.563235e-54 |
| MsG0180005954.01 | MsG0880044542.01 | 0.834250 | 3.341338e-56 | 3.943032e-53 |
| MsG0180005954.01 | MsG0880044782.01 | 0.827066 | 1.920782e-54 | 1.834268e-51 |
| MsG0180005954.01 | MsG0880045042.01 | 0.837296 | 5.652498e-57 | 7.309895e-54 |
| MsG0180005954.01 | MsG0880045111.01 | 0.812325 | 4.488457e-51 | 2.845186e-48 |
| MsG0180005954.01 | MsG0880045118.01 | 0.813382 | 2.632496e-51 | 1.716590e-48 |
| MsG0180005954.01 | MsG0880045145.01 | 0.801373 | 9.284688e-49 | 4.426805e-46 |
| MsG0180005954.01 | MsG0880045168.01 | 0.815088 | 1.105907e-51 | 7.551600e-49 |
| MsG0180005954.01 | MsG0880045453.01 | 0.804999 | 1.649563e-49 | 8.629183e-47 |
| MsG0180005954.01 | MsG0880045653.01 | 0.801644 | 8.168316e-49 | 3.921144e-46 |
| MsG0180005954.01 | MsG0880045691.01 | 0.834021 | 3.812630e-56 | 4.468161e-53 |
| MsG0180005954.01 | MsG0880045736.01 | 0.847533 | 1.089172e-59 | 1.942035e-56 |
| MsG0180005954.01 | MsG0880045937.01 | 0.810060 | 1.390621e-50 | 8.300004e-48 |
| MsG0180005954.01 | MsG0880045965.01 | 0.825002 | 5.942537e-54 | 5.350145e-51 |
| MsG0180005954.01 | MsG0880046012.01 | 0.804055 | 2.595269e-49 | 1.325110e-46 |
| MsG0180005954.01 | MsG0880046479.01 | 0.821898 | 3.161129e-53 | 2.605441e-50 |
| MsG0180005954.01 | MsG0880046532.01 | 0.810282 | 1.245739e-50 | 7.477892e-48 |
| MsG0180005954.01 | MsG0880047191.01 | 0.811954 | 5.405793e-51 | 3.392327e-48 |
| MsG0180005954.01 | MsG0880047473.01 | 0.810923 | 9.052457e-51 | 5.528265e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005954.01.T01 | MTR_1g110490 | 77.122 | 271 | 33 | 5 | 4 | 259 | 185 | 441 | 7.60e-135 | 387 |
| MsG0180005954.01.T01 | MTR_1g110490 | 77.122 | 271 | 33 | 5 | 4 | 259 | 274 | 530 | 7.12e-134 | 388 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005954.01.T01 | AT1G57600 | 56.716 | 268 | 87 | 5 | 4 | 256 | 128 | 381 | 2.57e-100 | 298 |
| MsG0180005954.01.T01 | AT1G57600 | 56.716 | 268 | 87 | 5 | 4 | 256 | 274 | 527 | 1.25e-98 | 298 |
| MsG0180005954.01.T01 | AT1G57600 | 56.716 | 268 | 87 | 5 | 4 | 256 | 274 | 527 | 1.25e-98 | 298 |
| MsG0180005954.01.T01 | AT1G57600 | 56.716 | 268 | 87 | 5 | 4 | 256 | 274 | 527 | 1.25e-98 | 298 |
Find 70 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGCGTTGCACATCAAATT+TGG | 0.145675 | 1:+98012536 | MsG0180005954.01.T01:three_prime_UTR |
| ATCAGCCGCAAAAGCATTTA+AGG | 0.184863 | 1:+98011649 | MsG0180005954.01.T01:CDS |
| CCTCACGAGCCATTTGTTAA+AGG | 0.212104 | 1:-98011285 | None:intergenic |
| AATTAGGCTGAAAGCTCTTT+TGG | 0.234805 | 1:+98011760 | MsG0180005954.01.T01:intron |
| TTTAAAATGGATCAAGATAA+TGG | 0.242636 | 1:-98012506 | None:intergenic |
| CGCATCGGCAATCTTTAAAA+TGG | 0.251251 | 1:-98012519 | None:intergenic |
| ACTACAATGCCTTTGCTAAT+AGG | 0.269390 | 1:+98010657 | MsG0180005954.01.T01:CDS |
| GCCACAACTTGGAAGGCTTT+TGG | 0.272160 | 1:+98011246 | MsG0180005954.01.T01:CDS |
| GTTAGAAATGTGATATTCTA+TGG | 0.273414 | 1:+98010581 | MsG0180005954.01.T01:CDS |
| GTCATGCATTTATCCGGTTC+AGG | 0.298711 | 1:-98012383 | None:intergenic |
| GCCAAAGATAGAGGAGAAAA+TGG | 0.319156 | 1:-98012851 | None:intergenic |
| GACGTGTTCATCATTGGATA+TGG | 0.322150 | 1:+98010810 | MsG0180005954.01.T01:CDS |
| CTGATACTTAACAGTTTGTT+TGG | 0.332551 | 1:+98012452 | MsG0180005954.01.T01:three_prime_UTR |
| TTCACAGGGCTGCCTGTCCT+TGG | 0.341989 | 1:+98012194 | MsG0180005954.01.T01:intron |
| CGTGAACTCAGTGCTGTTGC+TGG | 0.351376 | 1:+98011796 | MsG0180005954.01.T01:CDS |
| GGTATGTGTACATTCCTCTT+GGG | 0.362421 | 1:+98011393 | MsG0180005954.01.T01:intron |
| ATGCGTTGCACATCAAATTT+GGG | 0.390739 | 1:+98012537 | MsG0180005954.01.T01:three_prime_UTR |
| ACTTAACAGTTTGTTTGGCT+TGG | 0.410155 | 1:+98012457 | MsG0180005954.01.T01:three_prime_UTR |
| ACAGGGCTGCCTGTCCTTGG+AGG | 0.415796 | 1:+98012197 | MsG0180005954.01.T01:intron |
| ACCTTAGGAAGCTTCTTTCA+TGG | 0.422815 | 1:+98011582 | MsG0180005954.01.T01:intron |
| CCTATGGACGTGTTCATCAT+TGG | 0.423881 | 1:+98010804 | MsG0180005954.01.T01:CDS |
| ACTTGGTGCAAATTCTTGTC+TGG | 0.424186 | 1:+98012412 | MsG0180005954.01.T01:three_prime_UTR |
| AGGTATGTGTACATTCCTCT+TGG | 0.428755 | 1:+98011392 | MsG0180005954.01.T01:intron |
| AAACAAAGGTCGCCCTGAAC+CGG | 0.429639 | 1:+98012370 | MsG0180005954.01.T01:exon |
| GGCATGCTTCCTTTAACAAA+TGG | 0.429696 | 1:+98011276 | MsG0180005954.01.T01:CDS |
| TATTAATAATTGCCACAACT+TGG | 0.430954 | 1:+98011235 | MsG0180005954.01.T01:CDS |
| TTAAAATGGATCAAGATAAT+GGG | 0.442652 | 1:-98012505 | None:intergenic |
| ATCATAGTCATGCATTTATC+CGG | 0.447755 | 1:-98012389 | None:intergenic |
| TTTATTCTTTATCCCTGAGT+TGG | 0.455828 | 1:+98011619 | MsG0180005954.01.T01:CDS |
| GTGGAAGCACTTATCTCCTA+TGG | 0.462834 | 1:+98010788 | MsG0180005954.01.T01:CDS |
| ACGTGTTCATCATTGGATAT+GGG | 0.472325 | 1:+98010811 | MsG0180005954.01.T01:CDS |
| TTGTTAACAGGTGGCAAACC+TGG | 0.478504 | 1:+98012037 | MsG0180005954.01.T01:intron |
| GAATTGTGTTGTAGGTGAAC+GGG | 0.479932 | 1:+98011183 | MsG0180005954.01.T01:intron |
| TCCAAAAGCCTTCCAAGTTG+TGG | 0.490739 | 1:-98011247 | None:intergenic |
| TGATATTCTATGGTTTCCGT+TGG | 0.493026 | 1:+98010591 | MsG0180005954.01.T01:CDS |
| CCTTAGGAAGCTTCTTTCAT+GGG | 0.495974 | 1:+98011583 | MsG0180005954.01.T01:intron |
| GGAAGCTTCTTTCATGGGCG+TGG | 0.496623 | 1:+98011588 | MsG0180005954.01.T01:intron |
| TCATGCATTTATCCGGTTCA+GGG | 0.500699 | 1:-98012382 | None:intergenic |
| AATAATTGCCACAACTTGGA+AGG | 0.511611 | 1:+98011239 | MsG0180005954.01.T01:CDS |
| GTATGTGTACATTCCTCTTG+GGG | 0.525167 | 1:+98011394 | MsG0180005954.01.T01:CDS |
| GATATTCTATGGTTTCCGTT+GGG | 0.539722 | 1:+98010592 | MsG0180005954.01.T01:CDS |
| ATAAGCAAGCCTCCAAGGAC+AGG | 0.543393 | 1:-98012206 | None:intergenic |
| TTCAGGTCTTAAACTTCATG+TGG | 0.546074 | 1:+98011044 | MsG0180005954.01.T01:intron |
| TAGGTTTGCATAATGAAACT+AGG | 0.550020 | 1:+98012662 | MsG0180005954.01.T01:three_prime_UTR |
| GTTTGGCTTGGAGATATCTG+TGG | 0.551371 | 1:+98012469 | MsG0180005954.01.T01:three_prime_UTR |
| ACAATGCCTTTGCTAATAGG+TGG | 0.557428 | 1:+98010660 | MsG0180005954.01.T01:CDS |
| CCAATGATGAACACGTCCAT+AGG | 0.560827 | 1:-98010804 | None:intergenic |
| ATGTCATAAGCAAGCCTCCA+AGG | 0.563699 | 1:-98012211 | None:intergenic |
| AAATTTGATGTGCAACGCAT+CGG | 0.566308 | 1:-98012534 | None:intergenic |
| TTTGGCTTGGAGATATCTGT+GGG | 0.568060 | 1:+98012470 | MsG0180005954.01.T01:three_prime_UTR |
| ATCATTGCCAACTGAAAACA+AGG | 0.569913 | 1:+98012599 | MsG0180005954.01.T01:three_prime_UTR |
| GGAATTGTGTTGTAGGTGAA+CGG | 0.574106 | 1:+98011182 | MsG0180005954.01.T01:intron |
| CGTGTTCATCATTGGATATG+GGG | 0.576460 | 1:+98010812 | MsG0180005954.01.T01:CDS |
| GCAAATTCTTGTCTGGTGGT+AGG | 0.581540 | 1:+98012419 | MsG0180005954.01.T01:three_prime_UTR |
| TGGTGCAAATTCTTGTCTGG+TGG | 0.581960 | 1:+98012415 | MsG0180005954.01.T01:three_prime_UTR |
| CCTTTAACAAATGGCTCGTG+AGG | 0.584960 | 1:+98011285 | MsG0180005954.01.T01:CDS |
| CAATGCCTTTGCTAATAGGT+GGG | 0.598319 | 1:+98010661 | MsG0180005954.01.T01:CDS |
| AAATGCATGACTATGATACT+TGG | 0.598922 | 1:+98012395 | MsG0180005954.01.T01:three_prime_UTR |
| TAACAGGTGGCAAACCTGGT+TGG | 0.602168 | 1:+98012041 | MsG0180005954.01.T01:intron |
| TAAGTGCTTCCACAAACCGC+TGG | 0.606925 | 1:-98010778 | None:intergenic |
| AAGCGCCCACCTATTAGCAA+AGG | 0.620476 | 1:-98010666 | None:intergenic |
| CCATCTGGCATGATTTAGAG+TGG | 0.634701 | 1:+98011465 | MsG0180005954.01.T01:CDS |
| GTCCAATAACAAAACCAACC+AGG | 0.634921 | 1:-98012055 | None:intergenic |
| AGTTACAATCACTTGCCTCG+TGG | 0.636614 | 1:+98011822 | MsG0180005954.01.T01:CDS |
| TATGTGTACATTCCTCTTGG+GGG | 0.644094 | 1:+98011395 | MsG0180005954.01.T01:CDS |
| CCACTCTAAATCATGCCAGA+TGG | 0.644443 | 1:-98011465 | None:intergenic |
| GTTGTAGGTGAACGGGATTG+AGG | 0.646607 | 1:+98011190 | MsG0180005954.01.T01:intron |
| GGATAAAACACAATACCCAA+CGG | 0.670518 | 1:-98010607 | None:intergenic |
| ACATAGATGAAGCAAAACAA+AGG | 0.675210 | 1:+98012356 | MsG0180005954.01.T01:CDS |
| GATGTGTCATGAGCTCAACA+AGG | 0.689481 | 1:-98010628 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTAAATCTATTAAAAAT+AGG | + | Chr1:98012638-98012657 | MsG0180005954.01.T01:three_prime_UTR | 10.0% |
| !! | AAGTAAATCTATTAAAAATA+GGG | + | Chr1:98012639-98012658 | MsG0180005954.01.T01:three_prime_UTR | 10.0% |
| !! | AGAATTATAATAATCATATA+TGG | - | Chr1:98011876-98011895 | None:intergenic | 10.0% |
| !! | AAAAAATTGAATATAACAAG+TGG | - | Chr1:98010709-98010728 | None:intergenic | 15.0% |
| !! | AAATGATAACTTAAATTTGA+CGG | + | Chr1:98011358-98011377 | MsG0180005954.01.T01:intron | 15.0% |
| !!! | TCAAATTTAAGTTATCATTT+GGG | - | Chr1:98011358-98011377 | None:intergenic | 15.0% |
| !!! | TTAAGTTTTAATTCTTTTTC+TGG | + | Chr1:98012757-98012776 | MsG0180005954.01.T01:three_prime_UTR | 15.0% |
| !!! | TTTACTCTAATTTTATTGTA+TGG | + | Chr1:98010726-98010745 | MsG0180005954.01.T01:intron | 15.0% |
| !! | AAAAAAAAAAAAAAACGCTG+TGG | - | Chr1:98010994-98011013 | None:intergenic | 20.0% |
| !! | AAATCTATTAAAAATAGGGT+AGG | + | Chr1:98012643-98012662 | MsG0180005954.01.T01:three_prime_UTR | 20.0% |
| !! | AATGATAACTTAAATTTGAC+GGG | + | Chr1:98011359-98011378 | MsG0180005954.01.T01:intron | 20.0% |
| !! | AGTTACCATTATTAATTCTT+TGG | + | Chr1:98011922-98011941 | MsG0180005954.01.T01:intron | 20.0% |
| !! | TCTGTTATGTTAAAAAGTAA+AGG | - | Chr1:98012138-98012157 | None:intergenic | 20.0% |
| !! | TTAAAATGGATCAAGATAAT+GGG | - | Chr1:98012508-98012527 | None:intergenic | 20.0% |
| !!! | AAAATGGTTTTGTATAAGAT+TGG | - | Chr1:98012838-98012857 | None:intergenic | 20.0% |
| !!! | ATACATTTTGACATATTTTC+TGG | - | Chr1:98011218-98011237 | None:intergenic | 20.0% |
| !!! | GTCAAATTTAAGTTATCATT+TGG | - | Chr1:98011359-98011378 | None:intergenic | 20.0% |
| !!! | TTTAAAATGGATCAAGATAA+TGG | - | Chr1:98012509-98012528 | None:intergenic | 20.0% |
| ! | AAAAACCAAATGGAAAATCA+TGG | - | Chr1:98011328-98011347 | None:intergenic | 25.0% |
| ! | ATGATAACTTAAATTTGACG+GGG | + | Chr1:98011360-98011379 | MsG0180005954.01.T01:intron | 25.0% |
| ! | ATTATTAGAGAACAAATGTG+AGG | - | Chr1:98012305-98012324 | None:intergenic | 25.0% |
| ! | GAAAAAGCTCTTAAATGTAT+GGG | + | Chr1:98011424-98011443 | MsG0180005954.01.T01:CDS | 25.0% |
| ! | GAAATTAGATGAGAAAAACA+AGG | - | Chr1:98011688-98011707 | None:intergenic | 25.0% |
| ! | GTACATCTTTACAAATAGAA+TGG | - | Chr1:98011522-98011541 | None:intergenic | 25.0% |
| ! | GTTAGAAATGTGATATTCTA+TGG | + | Chr1:98010581-98010600 | MsG0180005954.01.T01:CDS | 25.0% |
| ! | TATTAATAATTGCCACAACT+TGG | + | Chr1:98011235-98011254 | MsG0180005954.01.T01:CDS | 25.0% |
| ! | TGGAGTTAAATTTCGAAATT+AGG | + | Chr1:98011744-98011763 | MsG0180005954.01.T01:intron | 25.0% |
| ! | TTATAATTCTTAGCCATTCT+CGG | + | Chr1:98011886-98011905 | MsG0180005954.01.T01:intron | 25.0% |
| ! | TTGTAAAGATGTACATTCTT+TGG | + | Chr1:98011528-98011547 | MsG0180005954.01.T01:intron | 25.0% |
| ! | TTGTATTATGTATCTGTTTC+AGG | + | Chr1:98011027-98011046 | MsG0180005954.01.T01:intron | 25.0% |
| ! | TTTCTCATCTAATTTCTCAA+CGG | + | Chr1:98011692-98011711 | MsG0180005954.01.T01:intron | 25.0% |
| !! | CTAACTGAATTACTATTTTG+AGG | - | Chr1:98010566-98010585 | None:intergenic | 25.0% |
| !! | TATTACCTTAAATGCTTTTG+CGG | - | Chr1:98011657-98011676 | None:intergenic | 25.0% |
| !! | TTAATTTGGAATTGTGTTGT+AGG | + | Chr1:98011175-98011194 | MsG0180005954.01.T01:intron | 25.0% |
| !! | TTGCTTATGACATTTTATGT+TGG | + | Chr1:98012221-98012240 | MsG0180005954.01.T01:CDS | 25.0% |
| !! | TTTAACCATGATTTTCCATT+TGG | + | Chr1:98011320-98011339 | MsG0180005954.01.T01:intron | 25.0% |
| AAATGCATGACTATGATACT+TGG | + | Chr1:98012395-98012414 | MsG0180005954.01.T01:three_prime_UTR | 30.0% | |
| ACATAGATGAAGCAAAACAA+AGG | + | Chr1:98012356-98012375 | MsG0180005954.01.T01:CDS | 30.0% | |
| ATAGAAAACCATTCAAACGA+TGG | - | Chr1:98012281-98012300 | None:intergenic | 30.0% | |
| ATCATAGTCATGCATTTATC+CGG | - | Chr1:98012392-98012411 | None:intergenic | 30.0% | |
| ATTACGAAATTCCATTTCAC+AGG | + | Chr1:98012179-98012198 | MsG0180005954.01.T01:intron | 30.0% | |
| GGAAAAAGCTCTTAAATGTA+TGG | + | Chr1:98011423-98011442 | MsG0180005954.01.T01:CDS | 30.0% | |
| GGATTAAACAGACCAATAAA+GGG | - | Chr1:98011501-98011520 | None:intergenic | 30.0% | |
| GGGAAAAACTAAAAACCAAA+TGG | - | Chr1:98011338-98011357 | None:intergenic | 30.0% | |
| TAAACGTCCATGTATATTCA+TGG | + | Chr1:98011143-98011162 | MsG0180005954.01.T01:intron | 30.0% | |
| TAGGTTTGCATAATGAAACT+AGG | + | Chr1:98012662-98012681 | MsG0180005954.01.T01:three_prime_UTR | 30.0% | |
| TGATTATTCTCATGAACCTT+AGG | + | Chr1:98011567-98011586 | MsG0180005954.01.T01:intron | 30.0% | |
| TGGATTAAACAGACCAATAA+AGG | - | Chr1:98011502-98011521 | None:intergenic | 30.0% | |
| TTACGAAATTCCATTTCACA+GGG | + | Chr1:98012180-98012199 | MsG0180005954.01.T01:intron | 30.0% | |
| TTTATTCTTTATCCCTGAGT+TGG | + | Chr1:98011619-98011638 | MsG0180005954.01.T01:CDS | 30.0% | |
| ! | ATGTATCCATTAGTGTCATT+AGG | - | Chr1:98010884-98010903 | None:intergenic | 30.0% |
| ! | CATATATGGTTAGCTATCAA+GGG | - | Chr1:98011862-98011881 | None:intergenic | 30.0% |
| ! | CTGATACTTAACAGTTTGTT+TGG | + | Chr1:98012452-98012471 | MsG0180005954.01.T01:three_prime_UTR | 30.0% |
| ! | GACATTTTATGTTGGAACAA+AGG | + | Chr1:98012229-98012248 | MsG0180005954.01.T01:CDS | 30.0% |
| ! | GCTTTCTTCTTTTGTTCATA+AGG | + | Chr1:98012097-98012116 | MsG0180005954.01.T01:intron | 30.0% |
| ! | TCATATATGGTTAGCTATCA+AGG | - | Chr1:98011863-98011882 | None:intergenic | 30.0% |
| ! | TCTTCATCAATTTTATCCAG+CGG | + | Chr1:98010762-98010781 | MsG0180005954.01.T01:CDS | 30.0% |
| ! | TCTTCTTTTGTTCATAAGGA+AGG | + | Chr1:98012101-98012120 | MsG0180005954.01.T01:intron | 30.0% |
| ! | TGAATTTTCCATCGTTTGAA+TGG | + | Chr1:98012270-98012289 | MsG0180005954.01.T01:intron | 30.0% |
| !! | ATGGGTTATATTCACTTTTG+TGG | + | Chr1:98011442-98011461 | MsG0180005954.01.T01:CDS | 30.0% |
| !! | CTGATTTTAATACCAACTCA+GGG | - | Chr1:98011634-98011653 | None:intergenic | 30.0% |
| !!! | TCATTTTCCTTGTTTTCAGT+TGG | - | Chr1:98012609-98012628 | None:intergenic | 30.0% |
| !!! | TTTGTTTTGCTTCATCTATG+TGG | - | Chr1:98012357-98012376 | None:intergenic | 30.0% |
| AAATTTGATGTGCAACGCAT+CGG | - | Chr1:98012537-98012556 | None:intergenic | 35.0% | |
| AACGCTGTGGTAACATAAAT+TGG | - | Chr1:98010981-98011000 | None:intergenic | 35.0% | |
| AATAATTGCCACAACTTGGA+AGG | + | Chr1:98011239-98011258 | MsG0180005954.01.T01:CDS | 35.0% | |
| ACATCTAGCTGCAAAAACAT+AGG | - | Chr1:98010542-98010561 | None:intergenic | 35.0% | |
| ACCTACCTAGTGATATACTA+AGG | + | Chr1:98010912-98010931 | MsG0180005954.01.T01:intron | 35.0% | |
| ACGTGTTCATCATTGGATAT+GGG | + | Chr1:98010811-98010830 | MsG0180005954.01.T01:CDS | 35.0% | |
| ACTACAATGCCTTTGCTAAT+AGG | + | Chr1:98010657-98010676 | MsG0180005954.01.T01:CDS | 35.0% | |
| ACTTCCTCCATGAATATACA+TGG | - | Chr1:98011153-98011172 | None:intergenic | 35.0% | |
| AGTATATCACTAGGTAGGTT+TGG | - | Chr1:98010911-98010930 | None:intergenic | 35.0% | |
| AGTGATATACTAAGGCTTAG+TGG | + | Chr1:98010920-98010939 | MsG0180005954.01.T01:intron | 35.0% | |
| ATCATTGCCAACTGAAAACA+AGG | + | Chr1:98012599-98012618 | MsG0180005954.01.T01:three_prime_UTR | 35.0% | |
| ATGCGTTGCACATCAAATTT+GGG | + | Chr1:98012537-98012556 | MsG0180005954.01.T01:three_prime_UTR | 35.0% | |
| CATGGAGGAAGTCATTAATT+TGG | + | Chr1:98011161-98011180 | MsG0180005954.01.T01:intron | 35.0% | |
| CGCAGCCAAAGAATTAATAA+TGG | - | Chr1:98011930-98011949 | None:intergenic | 35.0% | |
| CTAAGCCTTAGTATATCACT+AGG | - | Chr1:98010920-98010939 | None:intergenic | 35.0% | |
| GATATTCTATGGTTTCCGTT+GGG | + | Chr1:98010592-98010611 | MsG0180005954.01.T01:CDS | 35.0% | |
| GGATAAAACACAATACCCAA+CGG | - | Chr1:98010610-98010629 | None:intergenic | 35.0% | |
| TGATATTCTATGGTTTCCGT+TGG | + | Chr1:98010591-98010610 | MsG0180005954.01.T01:CDS | 35.0% | |
| TTCAGGTCTTAAACTTCATG+TGG | + | Chr1:98011044-98011063 | MsG0180005954.01.T01:intron | 35.0% | |
| TTTCTAAGCCACGAAAAAGA+GGG | - | Chr1:98012701-98012720 | None:intergenic | 35.0% | |
| ! | AATTAGGCTGAAAGCTCTTT+TGG | + | Chr1:98011760-98011779 | MsG0180005954.01.T01:intron | 35.0% |
| ! | ACTTAACAGTTTGTTTGGCT+TGG | + | Chr1:98012457-98012476 | MsG0180005954.01.T01:three_prime_UTR | 35.0% |
| ! | ATTAGGCTGAAAGCTCTTTT+GGG | + | Chr1:98011761-98011780 | MsG0180005954.01.T01:intron | 35.0% |
| ! | GCGTGATTTCATATCTGTTT+TGG | + | Chr1:98011947-98011966 | MsG0180005954.01.T01:intron | 35.0% |
| ! | GGCTAAAGTTTTTACTGATC+TGG | + | Chr1:98011065-98011084 | MsG0180005954.01.T01:CDS | 35.0% |
| ! | TTTTCTAAGCCACGAAAAAG+AGG | - | Chr1:98012702-98012721 | None:intergenic | 35.0% |
| !! | CTTTTTCGTGGCTTAGAAAA+TGG | + | Chr1:98012702-98012721 | MsG0180005954.01.T01:three_prime_UTR | 35.0% |
| !! | GCTGATTTTAATACCAACTC+AGG | - | Chr1:98011635-98011654 | None:intergenic | 35.0% |
| !! | TGGAAGGCTTTTGGAAAAAT+TGG | + | Chr1:98011255-98011274 | MsG0180005954.01.T01:CDS | 35.0% |
| !!! | AACCTGGTTGGTTTTGTTAT+TGG | + | Chr1:98012053-98012072 | MsG0180005954.01.T01:CDS | 35.0% |
| AACATAAGCTGCAGATACAC+AGG | - | Chr1:98012334-98012353 | None:intergenic | 40.0% | |
| ACAATGCCTTTGCTAATAGG+TGG | + | Chr1:98010660-98010679 | MsG0180005954.01.T01:CDS | 40.0% | |
| ACCTTAGGAAGCTTCTTTCA+TGG | + | Chr1:98011582-98011601 | MsG0180005954.01.T01:intron | 40.0% | |
| ACGTCCATGTATATTCATGG+AGG | + | Chr1:98011146-98011165 | MsG0180005954.01.T01:intron | 40.0% | |
| AGGTATGTGTACATTCCTCT+TGG | + | Chr1:98011392-98011411 | MsG0180005954.01.T01:intron | 40.0% | |
| ATTTGACGGGGTAGAAATTC+AGG | + | Chr1:98011372-98011391 | MsG0180005954.01.T01:intron | 40.0% | |
| CAATGCCTTTGCTAATAGGT+GGG | + | Chr1:98010661-98010680 | MsG0180005954.01.T01:CDS | 40.0% | |
| CCTTAGGAAGCTTCTTTCAT+GGG | + | Chr1:98011583-98011602 | MsG0180005954.01.T01:intron | 40.0% | |
| CGTGTTCATCATTGGATATG+GGG | + | Chr1:98010812-98010831 | MsG0180005954.01.T01:CDS | 40.0% | |
| GAATTGTGTTGTAGGTGAAC+GGG | + | Chr1:98011183-98011202 | MsG0180005954.01.T01:intron | 40.0% | |
| GACGTGTTCATCATTGGATA+TGG | + | Chr1:98010810-98010829 | MsG0180005954.01.T01:CDS | 40.0% | |
| GATATACTAAGGCTTAGTGG+TGG | + | Chr1:98010923-98010942 | MsG0180005954.01.T01:intron | 40.0% | |
| GATGCGTTGCACATCAAATT+TGG | + | Chr1:98012536-98012555 | MsG0180005954.01.T01:three_prime_UTR | 40.0% | |
| GCCTTAGTATATCACTAGGT+AGG | - | Chr1:98010916-98010935 | None:intergenic | 40.0% | |
| GGAATTGTGTTGTAGGTGAA+CGG | + | Chr1:98011182-98011201 | MsG0180005954.01.T01:intron | 40.0% | |
| GGCATGCTTCCTTTAACAAA+TGG | + | Chr1:98011276-98011295 | MsG0180005954.01.T01:CDS | 40.0% | |
| GGTATGTGTACATTCCTCTT+GGG | + | Chr1:98011393-98011412 | MsG0180005954.01.T01:intron | 40.0% | |
| GTATGTGTACATTCCTCTTG+GGG | + | Chr1:98011394-98011413 | MsG0180005954.01.T01:CDS | 40.0% | |
| GTCCAATAACAAAACCAACC+AGG | - | Chr1:98012058-98012077 | None:intergenic | 40.0% | |
| TATGTGTACATTCCTCTTGG+GGG | + | Chr1:98011395-98011414 | MsG0180005954.01.T01:CDS | 40.0% | |
| TCATGCATTTATCCGGTTCA+GGG | - | Chr1:98012385-98012404 | None:intergenic | 40.0% | |
| TTCTAAGCCACGAAAAAGAG+GGG | - | Chr1:98012700-98012719 | None:intergenic | 40.0% | |
| ! | CAATTTTATCCAGCGGTTTG+TGG | + | Chr1:98010769-98010788 | MsG0180005954.01.T01:CDS | 40.0% |
| ! | CGCATCGGCAATCTTTAAAA+TGG | - | Chr1:98012522-98012541 | None:intergenic | 40.0% |
| ! | CTGTGACTTTTGTTAACAGG+TGG | + | Chr1:98012028-98012047 | MsG0180005954.01.T01:intron | 40.0% |
| ! | GAGCTGTGACTTTTGTTAAC+AGG | + | Chr1:98012025-98012044 | MsG0180005954.01.T01:intron | 40.0% |
| ! | GTGATTCTAGCTGTCTAACA+TGG | + | Chr1:98011724-98011743 | MsG0180005954.01.T01:intron | 40.0% |
| ! | TTAGGCTGAAAGCTCTTTTG+GGG | + | Chr1:98011762-98011781 | MsG0180005954.01.T01:intron | 40.0% |
| !! | ACTTGGTGCAAATTCTTGTC+TGG | + | Chr1:98012412-98012431 | MsG0180005954.01.T01:three_prime_UTR | 40.0% |
| !! | ATCAGCCGCAAAAGCATTTA+AGG | + | Chr1:98011649-98011668 | MsG0180005954.01.T01:CDS | 40.0% |
| !! | TATTCACTTTTGTGGCCATC+TGG | + | Chr1:98011450-98011469 | MsG0180005954.01.T01:CDS | 40.0% |
| !! | TTTGGCTTGGAGATATCTGT+GGG | + | Chr1:98012470-98012489 | MsG0180005954.01.T01:three_prime_UTR | 40.0% |
| !!! | GGTTTTGTTATTGGACCAAG+CGG | + | Chr1:98012062-98012081 | MsG0180005954.01.T01:CDS | 40.0% |
| ACGAAAAAGAGGGGAAAAGG+AGG | - | Chr1:98012691-98012710 | None:intergenic | 45.0% | |
| AGCAACCAGTTAATACCGCT+TGG | - | Chr1:98012080-98012099 | None:intergenic | 45.0% | |
| AGTTACAATCACTTGCCTCG+TGG | + | Chr1:98011822-98011841 | MsG0180005954.01.T01:CDS | 45.0% | |
| ATACTAAGGCTTAGTGGTGG+TGG | + | Chr1:98010926-98010945 | MsG0180005954.01.T01:intron | 45.0% | |
| ATGTCATAAGCAAGCCTCCA+AGG | - | Chr1:98012214-98012233 | None:intergenic | 45.0% | |
| CCAATGATGAACACGTCCAT+AGG | - | Chr1:98010807-98010826 | None:intergenic | 45.0% | |
| CCACTCTAAATCATGCCAGA+TGG | - | Chr1:98011468-98011487 | None:intergenic | 45.0% | |
| CCATCTGGCATGATTTAGAG+TGG | + | Chr1:98011465-98011484 | MsG0180005954.01.T01:CDS | 45.0% | |
| CCCATGAAAGAAGCTTCCTA+AGG | - | Chr1:98011586-98011605 | None:intergenic | 45.0% | |
| CCTATGGACGTGTTCATCAT+TGG | + | Chr1:98010804-98010823 | MsG0180005954.01.T01:CDS | 45.0% | |
| CCTGAGCCTAATGACACTAA+TGG | + | Chr1:98010875-98010894 | MsG0180005954.01.T01:intron | 45.0% | |
| CCTTTAACAAATGGCTCGTG+AGG | + | Chr1:98011285-98011304 | MsG0180005954.01.T01:CDS | 45.0% | |
| GAAGTCATTGAGACCGAGAA+TGG | - | Chr1:98011902-98011921 | None:intergenic | 45.0% | |
| GATGTGTCATGAGCTCAACA+AGG | - | Chr1:98010631-98010650 | None:intergenic | 45.0% | |
| GCAAATTCTTGTCTGGTGGT+AGG | + | Chr1:98012419-98012438 | MsG0180005954.01.T01:three_prime_UTR | 45.0% | |
| GGTACGTATGCTCCCTTTAT+TGG | + | Chr1:98011486-98011505 | MsG0180005954.01.T01:intron | 45.0% | |
| GTCATGCATTTATCCGGTTC+AGG | - | Chr1:98012386-98012405 | None:intergenic | 45.0% | |
| TCCAAAAGCCTTCCAAGTTG+TGG | - | Chr1:98011250-98011269 | None:intergenic | 45.0% | |
| TGGTGCAAATTCTTGTCTGG+TGG | + | Chr1:98012415-98012434 | MsG0180005954.01.T01:three_prime_UTR | 45.0% | |
| TTAGCTATCAAGGGCAACCA+AGG | - | Chr1:98011853-98011872 | None:intergenic | 45.0% | |
| TTGGACCAAGCGGTATTAAC+TGG | + | Chr1:98012072-98012091 | MsG0180005954.01.T01:intron | 45.0% | |
| TTGTTAACAGGTGGCAAACC+TGG | + | Chr1:98012037-98012056 | MsG0180005954.01.T01:intron | 45.0% | |
| ! | CCATTAGTGTCATTAGGCTC+AGG | - | Chr1:98010878-98010897 | None:intergenic | 45.0% |
| ! | CCTCACGAGCCATTTGTTAA+AGG | - | Chr1:98011288-98011307 | None:intergenic | 45.0% |
| !! | GTGGAAGCACTTATCTCCTA+TGG | + | Chr1:98010788-98010807 | MsG0180005954.01.T01:CDS | 45.0% |
| !! | GTTTGGCTTGGAGATATCTG+TGG | + | Chr1:98012469-98012488 | MsG0180005954.01.T01:three_prime_UTR | 45.0% |
| !! | TCCTTTTCCCCTCTTTTTCG+TGG | + | Chr1:98012690-98012709 | MsG0180005954.01.T01:three_prime_UTR | 45.0% |
| !!! | CTTTTTCAGGTTCTGGTCAC+TGG | + | Chr1:98011090-98011109 | MsG0180005954.01.T01:intron | 45.0% |
| !!! | TACTGATCTGGCGCTTTTTC+AGG | + | Chr1:98011077-98011096 | MsG0180005954.01.T01:CDS | 45.0% |
| AAACAAAGGTCGCCCTGAAC+CGG | + | Chr1:98012370-98012389 | MsG0180005954.01.T01:exon | 50.0% | |
| AAGCGCCCACCTATTAGCAA+AGG | - | Chr1:98010669-98010688 | None:intergenic | 50.0% | |
| ACATTCCTCTTGGGGGATCT+CGG | + | Chr1:98011402-98011421 | MsG0180005954.01.T01:CDS | 50.0% | |
| ATAAGCAAGCCTCCAAGGAC+AGG | - | Chr1:98012209-98012228 | None:intergenic | 50.0% | |
| GCCACGAAAAAGAGGGGAAA+AGG | - | Chr1:98012694-98012713 | None:intergenic | 50.0% | |
| GTTGTAGGTGAACGGGATTG+AGG | + | Chr1:98011190-98011209 | MsG0180005954.01.T01:intron | 50.0% | |
| TAACAGGTGGCAAACCTGGT+TGG | + | Chr1:98012041-98012060 | MsG0180005954.01.T01:intron | 50.0% | |
| TAAGTGCTTCCACAAACCGC+TGG | - | Chr1:98010781-98010800 | None:intergenic | 50.0% | |
| ! | GCCACAACTTGGAAGGCTTT+TGG | + | Chr1:98011246-98011265 | MsG0180005954.01.T01:CDS | 50.0% |
| ! | TTTTTCCGAGATCCCCCAAG+AGG | - | Chr1:98011410-98011429 | None:intergenic | 50.0% |
| !!! | TCTGGCGCTTTTTCAGGTTC+TGG | + | Chr1:98011083-98011102 | MsG0180005954.01.T01:intron | 50.0% |
| GCAACCAAGGACAAACCACG+AGG | - | Chr1:98011840-98011859 | None:intergenic | 55.0% | |
| GGAAGCTTCTTTCATGGGCG+TGG | + | Chr1:98011588-98011607 | MsG0180005954.01.T01:intron | 55.0% | |
| ! | CGTGAACTCAGTGCTGTTGC+TGG | + | Chr1:98011796-98011815 | MsG0180005954.01.T01:CDS | 55.0% |
| ! | CTTGCCTCGTGGTTTGTCCT+TGG | + | Chr1:98011833-98011852 | MsG0180005954.01.T01:intron | 55.0% |
| GGACAGGCAGCCCTGTGAAA+TGG | - | Chr1:98012193-98012212 | None:intergenic | 60.0% | |
| TTCACAGGGCTGCCTGTCCT+TGG | + | Chr1:98012194-98012213 | MsG0180005954.01.T01:intron | 60.0% | |
| ACAGGGCTGCCTGTCCTTGG+AGG | + | Chr1:98012197-98012216 | MsG0180005954.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 98010542 | 98012862 | 98010542 | ID=MsG0180005954.01;Name=MsG0180005954.01 |
| Chr1 | mRNA | 98010542 | 98012862 | 98010542 | ID=MsG0180005954.01.T01;Parent=MsG0180005954.01;Name=MsG0180005954.01.T01;_AED=0.41;_eAED=0.44;_QI=0|0.66|0.6|1|0.77|0.8|10|475|259 |
| Chr1 | exon | 98010542 | 98010697 | 98010542 | ID=MsG0180005954.01.T01:exon:50826;Parent=MsG0180005954.01.T01 |
| Chr1 | exon | 98010752 | 98010833 | 98010752 | ID=MsG0180005954.01.T01:exon:50827;Parent=MsG0180005954.01.T01 |
| Chr1 | exon | 98011049 | 98011098 | 98011049 | ID=MsG0180005954.01.T01:exon:50828;Parent=MsG0180005954.01.T01 |
| Chr1 | exon | 98011197 | 98011306 | 98011197 | ID=MsG0180005954.01.T01:exon:50829;Parent=MsG0180005954.01.T01 |
| Chr1 | exon | 98011394 | 98011486 | 98011394 | ID=MsG0180005954.01.T01:exon:50830;Parent=MsG0180005954.01.T01 |
| Chr1 | exon | 98011589 | 98011670 | 98011589 | ID=MsG0180005954.01.T01:exon:50831;Parent=MsG0180005954.01.T01 |
| Chr1 | exon | 98011766 | 98011843 | 98011766 | ID=MsG0180005954.01.T01:exon:50832;Parent=MsG0180005954.01.T01 |
| Chr1 | exon | 98012047 | 98012083 | 98012047 | ID=MsG0180005954.01.T01:exon:50833;Parent=MsG0180005954.01.T01 |
| Chr1 | exon | 98012201 | 98012250 | 98012201 | ID=MsG0180005954.01.T01:exon:50834;Parent=MsG0180005954.01.T01 |
| Chr1 | exon | 98012346 | 98012862 | 98012346 | ID=MsG0180005954.01.T01:exon:50835;Parent=MsG0180005954.01.T01 |
| Chr1 | CDS | 98010542 | 98010697 | 98010542 | ID=MsG0180005954.01.T01:cds;Parent=MsG0180005954.01.T01 |
| Chr1 | CDS | 98010752 | 98010833 | 98010752 | ID=MsG0180005954.01.T01:cds;Parent=MsG0180005954.01.T01 |
| Chr1 | CDS | 98011049 | 98011098 | 98011049 | ID=MsG0180005954.01.T01:cds;Parent=MsG0180005954.01.T01 |
| Chr1 | CDS | 98011197 | 98011306 | 98011197 | ID=MsG0180005954.01.T01:cds;Parent=MsG0180005954.01.T01 |
| Chr1 | CDS | 98011394 | 98011486 | 98011394 | ID=MsG0180005954.01.T01:cds;Parent=MsG0180005954.01.T01 |
| Chr1 | CDS | 98011589 | 98011670 | 98011589 | ID=MsG0180005954.01.T01:cds;Parent=MsG0180005954.01.T01 |
| Chr1 | CDS | 98011766 | 98011843 | 98011766 | ID=MsG0180005954.01.T01:cds;Parent=MsG0180005954.01.T01 |
| Chr1 | CDS | 98012047 | 98012083 | 98012047 | ID=MsG0180005954.01.T01:cds;Parent=MsG0180005954.01.T01 |
| Chr1 | CDS | 98012201 | 98012250 | 98012201 | ID=MsG0180005954.01.T01:cds;Parent=MsG0180005954.01.T01 |
| Chr1 | CDS | 98012346 | 98012387 | 98012346 | ID=MsG0180005954.01.T01:cds;Parent=MsG0180005954.01.T01 |
| Chr1 | three_prime_UTR | 98012388 | 98012862 | 98012388 | ID=MsG0180005954.01.T01:three_prime_utr;Parent=MsG0180005954.01.T01 |
| Gene Sequence |
| Protein sequence |
