AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009789.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009789.01.T01 MTR_2g070630 97.430 428 9 1 1 428 1 426 0.0 862
MsG0280009789.01.T01 MTR_7g032020 46.792 265 53 6 162 426 15 191 1.20e-54 180
MsG0280009789.01.T01 MTR_7g031960 63.235 136 25 2 293 427 36 147 2.71e-47 159
MsG0280009789.01.T01 MTR_7g032010 59.589 146 24 1 277 422 24 134 9.26e-47 157
MsG0280009789.01.T01 MTR_7g032100 77.320 97 18 2 277 372 42 135 1.44e-42 146
MsG0280009789.01.T01 MTR_7g031970 82.500 80 14 0 331 410 1 80 4.42e-40 138
MsG0280009789.01.T01 MTR_7g032110 80.000 75 15 0 348 422 13 87 3.47e-33 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009789.01.T01 AT1G78420 52.703 444 151 12 1 428 1 401 6.12e-131 383
MsG0280009789.01.T01 AT1G78420 52.703 444 151 12 1 428 1 401 6.12e-131 383
MsG0280009789.01.T01 AT1G17145 60.961 333 96 9 1 325 1 307 3.86e-117 345
MsG0280009789.01.T01 AT1G17145 66.270 252 64 6 1 246 1 237 5.90e-104 311

Find 129 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTCAATCTTTCTTAAAT+TGG 0.170053 2:+58119786 MsG0280009789.01.T01:three_prime_UTR
AGAGTGCCCGATTTGCTTTC+TGG 0.213761 2:+58115431 MsG0280009789.01.T01:CDS
AGCAATCTGGCTTTCGATTC+AGG 0.228472 2:+58118015 MsG0280009789.01.T01:CDS
TCACACGACGTGTGCAATTT+TGG 0.242014 2:+58119867 MsG0280009789.01.T01:three_prime_UTR
CTCTTCTGCAAACCCAATTC+AGG 0.285582 2:+58114006 MsG0280009789.01.T01:five_prime_UTR
AAGGTGCAAGCTTTGATTCT+AGG 0.295323 2:-58115371 None:intergenic
ATCGGAAAACGAACCTGAAT+TGG 0.313244 2:-58114019 None:intergenic
GGCCTGCCGGGTCCTGTATT+TGG 0.315698 2:+58119830 MsG0280009789.01.T01:three_prime_UTR
TCTTTCGCTGATGCTACTTC+TGG 0.320602 2:+58119204 MsG0280009789.01.T01:CDS
GAGTAGAGTAGTGAGGTAAA+TGG 0.325397 2:+58113866 None:intergenic
GCGCTTCATGGCAATAGTTT+AGG 0.346475 2:+58119754 MsG0280009789.01.T01:exon
GATGCGGCAGCAGGAACTTC+AGG 0.362957 2:+58116519 MsG0280009789.01.T01:CDS
TGAAGAATTCAAAACATAAT+CGG 0.377826 2:+58115211 MsG0280009789.01.T01:five_prime_UTR
TAACCGGATTGGTAGAGATA+TGG 0.381702 2:+58119428 MsG0280009789.01.T01:CDS
TACGGCAGTTTCTTCATCTC+CGG 0.383737 2:-58115400 None:intergenic
TCAAAACTCTCAGGAACAAT+AGG 0.393911 2:-58119666 None:intergenic
TCCTCATCCCCATCCCCATC+AGG 0.397816 2:+58119285 MsG0280009789.01.T01:CDS
GCCTTGACTATGTGGCCTGC+CGG 0.401889 2:+58119817 MsG0280009789.01.T01:three_prime_UTR
AAGAAAGGAAGGAGTAATAG+AGG 0.410642 2:-58113911 None:intergenic
AGAGAGAGAAAGAGAGAGAG+AGG 0.419811 2:-58113987 None:intergenic
TTCGTCTCCCATGGGTCAAC+AGG 0.420363 2:+58119254 MsG0280009789.01.T01:CDS
CATCTTGATCGGTTTAGACT+TGG 0.422282 2:-58116015 None:intergenic
CCCTGATGGGGATGGGGATG+AGG 0.422483 2:-58119286 None:intergenic
TTAGACCACCTCCTGCTACT+AGG 0.422910 2:+58116812 MsG0280009789.01.T01:CDS
AGAATTGTAATGAACAAGAA+AGG 0.432962 2:+58120099 MsG0280009789.01.T01:three_prime_UTR
AATTCTTCAACAAGATAATA+CGG 0.434180 2:-58115197 None:intergenic
AATCCGGTTATAAAACCTTC+TGG 0.439718 2:-58119415 None:intergenic
ACGCTCAGCAAGAGCTGCAA+TGG 0.441736 2:-58119322 None:intergenic
ACTTGGCATGGCTCGAGCTT+CGG 0.442906 2:-58119724 None:intergenic
TCGGAAAACGAACCTGAATT+GGG 0.452259 2:-58114018 None:intergenic
TGTGTAGGCCGAGTTGAATT+CGG 0.453524 2:-58116167 None:intergenic
GACGATTTCATCGTGTTCAA+TGG 0.454271 2:-58116758 None:intergenic
CAAGTGGACAGAGCGCTTCA+TGG 0.454949 2:+58119742 MsG0280009789.01.T01:CDS
TCTCCCATGGGTCAACAGGC+AGG 0.455889 2:+58119258 MsG0280009789.01.T01:CDS
TCAAAACATAATCGGCAAAC+GGG 0.458068 2:+58115219 MsG0280009789.01.T01:five_prime_UTR
TTTGCTCAAACTCCAAATAC+AGG 0.458626 2:-58119842 None:intergenic
CGCTATGCTTCGTCTCCCAT+GGG 0.462162 2:+58119246 MsG0280009789.01.T01:CDS
CGGGCACTCTTCACGATCTA+CGG 0.462496 2:-58115418 None:intergenic
TTCAAAACATAATCGGCAAA+CGG 0.463545 2:+58115218 MsG0280009789.01.T01:five_prime_UTR
AAGCTTGCACCTTGCTATCC+CGG 0.465807 2:+58115381 MsG0280009789.01.T01:CDS
CATCTGGTGGCCCCTCATCC+AGG 0.467372 2:-58119473 None:intergenic
TACCTATTGGCCCTAGTAGC+AGG 0.467414 2:-58116823 None:intergenic
CCTTGACTATGTGGCCTGCC+GGG 0.468497 2:+58119818 MsG0280009789.01.T01:three_prime_UTR
TACATCATTCAACATGCTAC+CGG 0.468509 2:+58119389 MsG0280009789.01.T01:CDS
AATCATACCAGAAAGCAAAT+CGG 0.469586 2:-58115438 None:intergenic
GCTGAGCGTCAGCAAATGTC+TGG 0.471400 2:+58119336 MsG0280009789.01.T01:CDS
TCGCTATGCTTCGTCTCCCA+TGG 0.471409 2:+58119245 MsG0280009789.01.T01:CDS
CTCCTGCTACTAGGGCCAAT+AGG 0.472204 2:+58116821 MsG0280009789.01.T01:CDS
TAATGGTCATGGAAGCAATC+TGG 0.478936 2:+58118002 MsG0280009789.01.T01:CDS
GGGGCCACCAGATGATACTA+TGG 0.479702 2:+58119482 MsG0280009789.01.T01:CDS
TTTGTAACAGTGTGCTTTGG+TGG 0.480061 2:+58115097 MsG0280009789.01.T01:five_prime_UTR
GTCCCTGCCTGTTGACCCAT+GGG 0.480982 2:-58119261 None:intergenic
GGAGGAGCAGCGTGTTATTG+AGG 0.483212 2:+58116486 MsG0280009789.01.T01:intron
TACAGAAAATCAATGAGAGC+AGG 0.484183 2:-58120016 None:intergenic
ATCTGCTCCTCAAAACTCTC+AGG 0.487324 2:-58119675 None:intergenic
GTTGTTGCCATAGTATCATC+TGG 0.489130 2:-58119489 None:intergenic
CGATGCTTGCCTTGACTATG+TGG 0.489494 2:+58119809 MsG0280009789.01.T01:three_prime_UTR
ATCATACCAGAAAGCAAATC+GGG 0.489560 2:-58115437 None:intergenic
CATGAAGCGCTCTGTCCACT+TGG 0.490170 2:-58119741 None:intergenic
TAGACCACCTCCTGCTACTA+GGG 0.495326 2:+58116813 MsG0280009789.01.T01:CDS
TAAAATTACAGGAGAATGGC+AGG 0.498788 2:+58119169 MsG0280009789.01.T01:intron
ACGGCAGTTTCTTCATCTCC+GGG 0.500944 2:-58115399 None:intergenic
CAACTAGGTGTCATGATCAA+TGG 0.512630 2:+58119508 MsG0280009789.01.T01:CDS
TGAATCACAGGTAGCTGAAA+CGG 0.514060 2:+58119542 MsG0280009789.01.T01:CDS
TTATTCACCCACAGAAAACC+TGG 0.516563 2:+58119455 MsG0280009789.01.T01:CDS
GTAAAATCAAAAGAAGAGAA+GGG 0.518256 2:+58116350 MsG0280009789.01.T01:CDS
TGTTGATCTTGAGGACATAA+TGG 0.518495 2:+58117985 MsG0280009789.01.T01:CDS
TAGATGTCCCTTCTGTAAAA+CGG 0.520659 2:+58116301 MsG0280009789.01.T01:CDS
GAGAGAGAAAGAGAGAGAGA+GGG 0.521303 2:-58113986 None:intergenic
TGTCCCTGCCTGTTGACCCA+TGG 0.522801 2:-58119262 None:intergenic
GGAGCAGATGATGCTGGCTA+TGG 0.524553 2:+58119689 MsG0280009789.01.T01:CDS
CCTCATCCCCATCCCCATCA+GGG 0.525146 2:+58119286 MsG0280009789.01.T01:CDS
TGTAAAATCAAAAGAAGAGA+AGG 0.526230 2:+58116349 MsG0280009789.01.T01:CDS
TAACCATATCTCTACCAATC+CGG 0.528573 2:-58119431 None:intergenic
TCTTTGTGCAACATCTTGAT+CGG 0.528788 2:-58116026 None:intergenic
CTCCCATGGGTCAACAGGCA+GGG 0.534445 2:+58119259 MsG0280009789.01.T01:CDS
GTTTGATGGGTAATAAACTC+GGG 0.535047 2:+58115256 MsG0280009789.01.T01:exon
TTTGATTGTATTATATATGG+GGG 0.535073 2:+58115037 MsG0280009789.01.T01:five_prime_UTR
TCACAGTCTAATGACAATGA+TGG 0.540422 2:+58119621 MsG0280009789.01.T01:CDS
GTTGAATACAGTTCAAATGC+AGG 0.541389 2:+58116610 MsG0280009789.01.T01:CDS
GTATTAAAATTACAGGAGAA+TGG 0.543201 2:+58119165 MsG0280009789.01.T01:intron
TGTTTGATGGGTAATAAACT+CGG 0.549903 2:+58115255 MsG0280009789.01.T01:exon
TGAATTTGATGTTGATCTTG+AGG 0.552392 2:+58117976 MsG0280009789.01.T01:CDS
TAATGATTCAAGTTAGTGAA+AGG 0.555084 2:+58119953 MsG0280009789.01.T01:three_prime_UTR
CTCATCCCCATCCCCATCAG+GGG 0.555424 2:+58119287 MsG0280009789.01.T01:CDS
AGCGCTCTGTCCACTTGGCA+TGG 0.556265 2:-58119736 None:intergenic
GAGCATAGATCATGAATCAC+AGG 0.559149 2:+58119530 MsG0280009789.01.T01:CDS
ACGTCGATCAGAAGAAGCTG+AGG 0.563289 2:+58115340 MsG0280009789.01.T01:CDS
TTTGTAGAGAGAGAGGATTG+CGG 0.568014 2:-58113962 None:intergenic
TCTTGAGGACATAATGGTCA+TGG 0.569111 2:+58117991 MsG0280009789.01.T01:CDS
CCCGGCAGGCCACATAGTCA+AGG 0.574709 2:-58119818 None:intergenic
CATGGCAATAGTTTAGGTCA+AGG 0.575621 2:+58119760 MsG0280009789.01.T01:exon
TTATAAAACCTTCTGGAACC+CGG 0.576681 2:-58119408 None:intergenic
ACCCACAGAAAACCTGGATG+AGG 0.577604 2:+58119461 MsG0280009789.01.T01:CDS
TCTTCATCTCCGGGATAGCA+AGG 0.578489 2:-58115390 None:intergenic
TGCACAAAGAGCATTTGTAC+AGG 0.579872 2:+58116039 MsG0280009789.01.T01:CDS
CAAACTCCAAATACAGGACC+CGG 0.583382 2:-58119836 None:intergenic
ACATGCTACCGGGTTCCAGA+AGG 0.587505 2:+58119400 MsG0280009789.01.T01:CDS
TTTATATATACAGATGTCAA+AGG 0.587984 2:+58119925 MsG0280009789.01.T01:three_prime_UTR
CCCACAGAAAACCTGGATGA+GGG 0.588118 2:+58119462 MsG0280009789.01.T01:CDS
TTGGCCCTAGTAGCAGGAGG+TGG 0.589181 2:-58116817 None:intergenic
ATGATACTATGGCAACAACT+AGG 0.590761 2:+58119493 MsG0280009789.01.T01:CDS
TGGGTAATAAACTCGGGAGG+AGG 0.594697 2:+58115262 MsG0280009789.01.T01:CDS
ACAGAAAATCAATGAGAGCA+GGG 0.596938 2:-58120015 None:intergenic
GCAGGAACTTCAGGATGAAG+AGG 0.598330 2:+58116528 MsG0280009789.01.T01:CDS
TTGATTGTATTATATATGGG+GGG 0.599473 2:+58115038 MsG0280009789.01.T01:five_prime_UTR
CTCAGGAACAATAGGTTCTG+TGG 0.602243 2:-58119658 None:intergenic
ATCAAAAGAAGAGAAGGGGA+TGG 0.603530 2:+58116355 MsG0280009789.01.T01:CDS
CTCCAAATACAGGACCCGGC+AGG 0.608908 2:-58119832 None:intergenic
TTATGATTATACAACCCTTG+TGG 0.609519 2:-58115315 None:intergenic
GCAGGAGGTGGTCTAACCAT+CGG 0.610275 2:-58116805 None:intergenic
ACATCATTCAACATGCTACC+GGG 0.611208 2:+58119390 MsG0280009789.01.T01:CDS
CTAGTAACAGGATACTGTGT+AGG 0.613414 2:-58116182 None:intergenic
GAAGCTCGAGCCATGCCAAG+TGG 0.614648 2:+58119726 MsG0280009789.01.T01:CDS
TCATCCCCATCCCCATCAGG+GGG 0.614847 2:+58119288 MsG0280009789.01.T01:CDS
TAAAATCAAAAGAAGAGAAG+GGG 0.616791 2:+58116351 MsG0280009789.01.T01:CDS
AAGCTCTTCAAATGTGAATG+TGG 0.620819 2:+58116576 MsG0280009789.01.T01:CDS
CCACAGAAAACCTGGATGAG+GGG 0.621820 2:+58119463 MsG0280009789.01.T01:CDS
TGAAAGTTCCGAATTCAACT+CGG 0.633080 2:+58116159 MsG0280009789.01.T01:CDS
AGACTCGTGTGCCACACCGA+TGG 0.640068 2:+58116789 MsG0280009789.01.T01:CDS
AATTATGCTGTGGAGTATCG+TGG 0.665873 2:+58116326 MsG0280009789.01.T01:CDS
GTTGCCATAGTATCATCTGG+TGG 0.667006 2:-58119486 None:intergenic
ACTCGGGAGGAGGAGACAAG+TGG 0.676793 2:+58115272 MsG0280009789.01.T01:CDS
TCTGTTGAAGCAGAAGATCG+TGG 0.681261 2:+58119582 MsG0280009789.01.T01:CDS
TAAAACGGCGAATTATGCTG+TGG 0.684555 2:+58116316 MsG0280009789.01.T01:CDS
CTATTGGCCCTAGTAGCAGG+AGG 0.695760 2:-58116820 None:intergenic
AGCGATCATCAGCTACGTAG+TGG 0.698441 2:-58119227 None:intergenic
AGGTGGTCTAACCATCGGTG+TGG 0.700122 2:-58116800 None:intergenic
TGATGGGTAATAAACTCGGG+AGG 0.700314 2:+58115259 MsG0280009789.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATAATATATATATAAA+TGG + Chr2:58117670-58117689 MsG0280009789.01.T01:intron 0.0%
!! AAAAAATGTTAATTTATACT+TGG + Chr2:58118945-58118964 MsG0280009789.01.T01:intron 10.0%
!! ATAACATTATCTATAAAAAT+CGG - Chr2:58115136-58115155 None:intergenic 10.0%
!! TATATATGTATTAAAATTAC+AGG + Chr2:58119158-58119177 MsG0280009789.01.T01:intron 10.0%
!!! GTATAAATTAACATTTTTTT+AGG - Chr2:58118944-58118963 None:intergenic 10.0%
!!! TTAATACTTTTATAAACTAT+CGG + Chr2:58118553-58118572 MsG0280009789.01.T01:intron 10.0%
!! AGTAAAAAATAGTATTAATG+AGG - Chr2:58118323-58118342 None:intergenic 15.0%
!! ATAAAGAAATTTAAATGAAG+AGG - Chr2:58118502-58118521 None:intergenic 15.0%
!! TAAAGAAATTTAAATGAAGA+GGG - Chr2:58118501-58118520 None:intergenic 15.0%
!!! AGAAAGTATAATTTCAAAAA+TGG - Chr2:58117910-58117929 None:intergenic 15.0%
!!! ATTAACATTTTTTTAGGAAA+AGG - Chr2:58118938-58118957 None:intergenic 15.0%
!!! ATTTTTGAAATTATACTTTC+TGG + Chr2:58117909-58117928 MsG0280009789.01.T01:intron 15.0%
!!! CTTTTGATTGTATTATATAT+GGG + Chr2:58115035-58115054 MsG0280009789.01.T01:five_prime_UTR 15.0%
!!! GATTTTTGAAAATATATATG+TGG - Chr2:58117756-58117775 None:intergenic 15.0%
!!! GGGTTTTTTTTTTTTTTTTT+TGG + Chr2:58114427-58114446 MsG0280009789.01.T01:intron 15.0%
!!! TCTTTTGATTGTATTATATA+TGG + Chr2:58115034-58115053 MsG0280009789.01.T01:five_prime_UTR 15.0%
!!! TTAACATTTTTTTAGGAAAA+GGG - Chr2:58118937-58118956 None:intergenic 15.0%
!!! TTAATACTATTTTTTACTTC+TGG + Chr2:58118325-58118344 MsG0280009789.01.T01:intron 15.0%
!!! TTTTGATTGTATTATATATG+GGG + Chr2:58115036-58115055 MsG0280009789.01.T01:five_prime_UTR 15.0%
!!! TTTTTGAAATTATACTTTCT+GGG + Chr2:58117910-58117929 MsG0280009789.01.T01:intron 15.0%
!!! TTTTTTTTTTTTTTTGGCTT+AGG + Chr2:58114433-58114452 MsG0280009789.01.T01:intron 15.0%
!! AACATTTAGCAAAAAATATC+AGG - Chr2:58117940-58117959 None:intergenic 20.0%
!! AATTCTTCAACAAGATAATA+CGG - Chr2:58115200-58115219 None:intergenic 20.0%
!! AGTTGTGATTTAAAAATCAA+AGG - Chr2:58117239-58117258 None:intergenic 20.0%
!! TAAGGTAGTTTATGAAAAAA+TGG + Chr2:58115751-58115770 MsG0280009789.01.T01:intron 20.0%
!! TATGCATAAGCTAAAAAATA+AGG - Chr2:58115683-58115702 None:intergenic 20.0%
!! TGAAGAATTCAAAACATAAT+CGG + Chr2:58115211-58115230 MsG0280009789.01.T01:five_prime_UTR 20.0%
!! TTAATACTAAATCTACAAGA+AGG - Chr2:58116257-58116276 None:intergenic 20.0%
!! TTGGATAATACTAAATTCAT+GGG - Chr2:58115999-58116018 None:intergenic 20.0%
!! TTTATATATACAGATGTCAA+AGG + Chr2:58119925-58119944 MsG0280009789.01.T01:three_prime_UTR 20.0%
!! TTTGATTGTATTATATATGG+GGG + Chr2:58115037-58115056 MsG0280009789.01.T01:five_prime_UTR 20.0%
!!! AAAAACTGAATTTTGTTTGA+TGG + Chr2:58115242-58115261 MsG0280009789.01.T01:exon 20.0%
!!! AAAACTGAATTTTGTTTGAT+GGG + Chr2:58115243-58115262 MsG0280009789.01.T01:exon 20.0%
!!! AAGTGATTTTCAAATTGTTA+AGG + Chr2:58114521-58114540 MsG0280009789.01.T01:intron 20.0%
!!! ACTTGATTTAGAATGTTTTA+CGG + Chr2:58117478-58117497 MsG0280009789.01.T01:intron 20.0%
!!! ATAAGATAGTTTTGTGAATT+TGG + Chr2:58114585-58114604 MsG0280009789.01.T01:intron 20.0%
!!! ATTGTTCTTTTGTAATGATA+GGG - Chr2:58118712-58118731 None:intergenic 20.0%
!!! GAATGATGTATTTTCATTAT+TGG - Chr2:58119379-58119398 None:intergenic 20.0%
!!! GATTTTTAAATCACAACTAA+AGG + Chr2:58117241-58117260 MsG0280009789.01.T01:intron 20.0%
!!! TATTGTTCTTTTGTAATGAT+AGG - Chr2:58118713-58118732 None:intergenic 20.0%
!!! TTTTGTATCGAATTGTTAAT+GGG + Chr2:58114344-58114363 MsG0280009789.01.T01:intron 20.0%
!!! TTTTGTTTAAATTTCTGTAG+TGG + Chr2:58116717-58116736 MsG0280009789.01.T01:intron 20.0%
! AAAAAATAAGGCAATCCAAA+CGG - Chr2:58115671-58115690 None:intergenic 25.0%
! AAAAATAAGTCAATCCAAAC+GGG + Chr2:58115860-58115879 MsG0280009789.01.T01:intron 25.0%
! ACAACTAAAGGAAATATTCA+TGG + Chr2:58117253-58117272 MsG0280009789.01.T01:intron 25.0%
! AGAATTGTAATGAACAAGAA+AGG + Chr2:58120099-58120118 MsG0280009789.01.T01:three_prime_UTR 25.0%
! AGACAACTATTTAAGGATTA+TGG + Chr2:58117549-58117568 MsG0280009789.01.T01:intron 25.0%
! ATGCATACTCATAAATATTC+AGG + Chr2:58116465-58116484 MsG0280009789.01.T01:intron 25.0%
! ATGCTAGATAATCTATTGTT+CGG + Chr2:58118170-58118189 MsG0280009789.01.T01:intron 25.0%
! CAAAAATAAGTCAATCCAAA+CGG + Chr2:58115859-58115878 MsG0280009789.01.T01:intron 25.0%
! CAACGTAAAAGCTTATTTAT+TGG + Chr2:58115814-58115833 MsG0280009789.01.T01:intron 25.0%
! CATCACACAGTAAAAAAAAA+TGG - Chr2:58119992-58120011 None:intergenic 25.0%
! CTGATAAAAGGAAATTAATC+AGG - Chr2:58116124-58116143 None:intergenic 25.0%
! CTTGGATAATACTAAATTCA+TGG - Chr2:58116000-58116019 None:intergenic 25.0%
! GAATAGTTTGATTAGAAAAG+GGG - Chr2:58115956-58115975 None:intergenic 25.0%
! GGAATAGTTTGATTAGAAAA+GGG - Chr2:58115957-58115976 None:intergenic 25.0%
! GTAAAATCAAAAGAAGAGAA+GGG + Chr2:58116350-58116369 MsG0280009789.01.T01:CDS 25.0%
! GTATTAAAATTACAGGAGAA+TGG + Chr2:58119165-58119184 MsG0280009789.01.T01:intron 25.0%
! GTTCATATTATGAAATTCAG+TGG + Chr2:58119035-58119054 MsG0280009789.01.T01:intron 25.0%
! TAAAATCAAAAGAAGAGAAG+GGG + Chr2:58116351-58116370 MsG0280009789.01.T01:CDS 25.0%
! TAATAATCCATAATTGAGCT+TGG + Chr2:58118376-58118395 MsG0280009789.01.T01:intron 25.0%
! TAGAATGAGACAACTATTTA+AGG + Chr2:58117542-58117561 MsG0280009789.01.T01:intron 25.0%
! TAGATCAAATATCCATAAGT+TGG - Chr2:58116934-58116953 None:intergenic 25.0%
! TCATAAATGAATGTAACACT+TGG + Chr2:58117104-58117123 MsG0280009789.01.T01:intron 25.0%
! TGCTTCAATCTTTCTTAAAT+TGG + Chr2:58119786-58119805 MsG0280009789.01.T01:three_prime_UTR 25.0%
! TGGAATAGTTTGATTAGAAA+AGG - Chr2:58115958-58115977 None:intergenic 25.0%
! TGGTAGATGAAAAATATACA+CGG + Chr2:58115292-58115311 MsG0280009789.01.T01:CDS 25.0%
! TGTAAAATCAAAAGAAGAGA+AGG + Chr2:58116349-58116368 MsG0280009789.01.T01:CDS 25.0%
! TTAAATAACTCGATTCAACT+TGG + Chr2:58115504-58115523 MsG0280009789.01.T01:intron 25.0%
! TTACACATACAGAAAAAATC+TGG - Chr2:58116662-58116681 None:intergenic 25.0%
! TTGATTGTATTATATATGGG+GGG + Chr2:58115038-58115057 MsG0280009789.01.T01:five_prime_UTR 25.0%
! TTTAGGAAAAGGGAAATATA+TGG - Chr2:58118927-58118946 None:intergenic 25.0%
! TTTCAAAATAGATCGACAAT+TGG - Chr2:58118198-58118217 None:intergenic 25.0%
!! AATTTTGCTGCATTGAAATT+AGG + Chr2:58114386-58114405 MsG0280009789.01.T01:intron 25.0%
!! ATTGGTAAAGTCTGTAATTT+TGG + Chr2:58114693-58114712 MsG0280009789.01.T01:intron 25.0%
!! GTTTTGTATCGAATTGTTAA+TGG + Chr2:58114343-58114362 MsG0280009789.01.T01:intron 25.0%
!! TAATGATTCAAGTTAGTGAA+AGG + Chr2:58119953-58119972 MsG0280009789.01.T01:three_prime_UTR 25.0%
!! TTGAGTGATTTTATTGCAAT+TGG + Chr2:58114675-58114694 MsG0280009789.01.T01:intron 25.0%
!! TTGGTAAAGTCTGTAATTTT+GGG + Chr2:58114694-58114713 MsG0280009789.01.T01:intron 25.0%
!!! AAAGCGATTAGCTTTTTAAA+AGG + Chr2:58117401-58117420 MsG0280009789.01.T01:intron 25.0%
!!! ATAAGTTGGTACAAAAACAA+TGG - Chr2:58116920-58116939 None:intergenic 25.0%
!!! ATTGTTTTTGTACCAACTTA+TGG + Chr2:58116919-58116938 MsG0280009789.01.T01:intron 25.0%
!!! CATTATTCATTAGCTTGTTA+AGG + Chr2:58115733-58115752 MsG0280009789.01.T01:intron 25.0%
!!! CTTGATTTAGAATGTTTTAC+GGG + Chr2:58117479-58117498 MsG0280009789.01.T01:intron 25.0%
!!! GTTTTGTGAATTTGGTTTTT+TGG + Chr2:58114593-58114612 MsG0280009789.01.T01:intron 25.0%
!!! TCCATAAACCATTTTTAAAC+TGG + Chr2:58117605-58117624 MsG0280009789.01.T01:intron 25.0%
!!! TCTGAATTGGGATTTTTTTT+GGG + Chr2:58114795-58114814 MsG0280009789.01.T01:intron 25.0%
!!! TGTTTATGTAAAAGTGTTCA+AGG - Chr2:58115617-58115636 None:intergenic 25.0%
!!! TTCTGAATTGGGATTTTTTT+TGG + Chr2:58114794-58114813 MsG0280009789.01.T01:intron 25.0%
!!! TTGATTTCACTTTGATTTGA+AGG + Chr2:58114310-58114329 MsG0280009789.01.T01:intron 25.0%
AAAAAACAGTCCATATGCTT+AGG - Chr2:58115887-58115906 None:intergenic 30.0%
AAAAATAAGGCAATCCAAAC+GGG - Chr2:58115670-58115689 None:intergenic 30.0%
AAAAGAAGCAAATTCTTCAC+AGG + Chr2:58118267-58118286 MsG0280009789.01.T01:intron 30.0%
AAAGAAGCAAATTCTTCACA+GGG + Chr2:58118268-58118287 MsG0280009789.01.T01:intron 30.0%
AATACTCCTTGTAACCTTAT+TGG - Chr2:58117019-58117038 None:intergenic 30.0%
AATAGAAGGAACGAAGAAAA+AGG - Chr2:58114068-58114087 None:intergenic 30.0%
AATCATACCAGAAAGCAAAT+CGG - Chr2:58115441-58115460 None:intergenic 30.0%
ACATAATAGGATAATGTTGC+GGG - Chr2:58116879-58116898 None:intergenic 30.0%
ACTTGGATGTCATTAGTAAA+TGG - Chr2:58117714-58117733 None:intergenic 30.0%
AGAAAAAGGAAGAAAAGACA+AGG - Chr2:58114054-58114073 None:intergenic 30.0%
AGTTTCTTATAGCTGTGATT+AGG + Chr2:58114264-58114283 MsG0280009789.01.T01:intron 30.0%
ATAAATGTCACCCAAAATGA+TGG - Chr2:58118875-58118894 None:intergenic 30.0%
ATCCATACAATCAAAACATC+AGG - Chr2:58117328-58117347 None:intergenic 30.0%
CAAACAAGCCAGTTTAAAAA+TGG - Chr2:58117616-58117635 None:intergenic 30.0%
CATACTCATAAATATTCAGG+AGG + Chr2:58116468-58116487 MsG0280009789.01.T01:intron 30.0%
CATATTATGAAATTCAGTGG+TGG + Chr2:58119038-58119057 MsG0280009789.01.T01:intron 30.0%
CATTAGCACAAAATCATAGA+TGG - Chr2:58116978-58116997 None:intergenic 30.0%
GAAAAGGGAAATATATGGTT+TGG - Chr2:58118922-58118941 None:intergenic 30.0%
GACATAATAGGATAATGTTG+CGG - Chr2:58116880-58116899 None:intergenic 30.0%
GCCAGTTTAAAAATGGTTTA+TGG - Chr2:58117609-58117628 None:intergenic 30.0%
GGAAAAAAAACAAAGCACAA+TGG - Chr2:58115978-58115997 None:intergenic 30.0%
GGAAATTCTTTCAACCAATA+AGG + Chr2:58117002-58117021 MsG0280009789.01.T01:intron 30.0%
GTTTCTTATAGCTGTGATTA+GGG + Chr2:58114265-58114284 MsG0280009789.01.T01:intron 30.0%
TAAATGTCACCCAAAATGAT+GGG - Chr2:58118874-58118893 None:intergenic 30.0%
TAATTAGACATCACATCACA+TGG - Chr2:58118653-58118672 None:intergenic 30.0%
TACTGTAACTGAATAGCTAT+TGG - Chr2:58115478-58115497 None:intergenic 30.0%
TAGCTATTGGAGATATGTAA+TGG - Chr2:58115465-58115484 None:intergenic 30.0%
TATATGTGGAGTAACAATGA+AGG - Chr2:58117742-58117761 None:intergenic 30.0%
TGAATTTGATGTTGATCTTG+AGG + Chr2:58117976-58117995 MsG0280009789.01.T01:CDS 30.0%
TGATACAAAAGAACGAATCA+TGG - Chr2:58117456-58117475 None:intergenic 30.0%
TGTTGTGGAAATAGTGAATT+TGG + Chr2:58114460-58114479 MsG0280009789.01.T01:intron 30.0%
TTAAAAATCAAAGGCTTAGC+TGG - Chr2:58117230-58117249 None:intergenic 30.0%
TTATGATTATACAACCCTTG+TGG - Chr2:58115318-58115337 None:intergenic 30.0%
TTCAAAACATAATCGGCAAA+CGG + Chr2:58115218-58115237 MsG0280009789.01.T01:five_prime_UTR 30.0%
TTGTATGGATGGATATGATT+AGG + Chr2:58117338-58117357 MsG0280009789.01.T01:intron 30.0%
TTTATTGCTTGTGCATTTCT+AGG + Chr2:58118517-58118536 MsG0280009789.01.T01:intron 30.0%
TTTCAACCAATAAGGTTACA+AGG + Chr2:58117010-58117029 MsG0280009789.01.T01:intron 30.0%
TTTGGGTGACATTTATATTG+TGG + Chr2:58118879-58118898 MsG0280009789.01.T01:intron 30.0%
! AAACAGTACCAATTGTTGTT+CGG - Chr2:58114186-58114205 None:intergenic 30.0%
! AAATATATGGTTTGGATGGA+AGG - Chr2:58118914-58118933 None:intergenic 30.0%
! AATATATGGTTTGGATGGAA+GGG - Chr2:58118913-58118932 None:intergenic 30.0%
! AGAGAAAAGAGTTTTCTCTT+AGG - Chr2:58117782-58117801 None:intergenic 30.0%
! ATGATTTTGTGCTAATGCTT+TGG + Chr2:58116981-58117000 MsG0280009789.01.T01:intron 30.0%
! GTGTTATTGAGGCAAAAATT+AGG + Chr2:58116497-58116516 MsG0280009789.01.T01:CDS 30.0%
! TAATGATTGGTTATCTTCAC+TGG + Chr2:58116062-58116081 MsG0280009789.01.T01:intron 30.0%
! TATTTTGTAACAGTGTGCTT+TGG + Chr2:58115094-58115113 MsG0280009789.01.T01:five_prime_UTR 30.0%
! TGTGTGAGACACTTATATTT+TGG + Chr2:58118609-58118628 MsG0280009789.01.T01:intron 30.0%
! TGTTTGATGGGTAATAAACT+CGG + Chr2:58115255-58115274 MsG0280009789.01.T01:exon 30.0%
! TTTACCTCTTGTTTACTTCA+AGG + Chr2:58114945-58114964 MsG0280009789.01.T01:intron 30.0%
! TTTGCAAAGTGTGTACTTTT+AGG + Chr2:58114905-58114924 MsG0280009789.01.T01:intron 30.0%
! TTTTCTTCGAACCAAACTAA+TGG + Chr2:58115582-58115601 MsG0280009789.01.T01:intron 30.0%
!! AGGAGATTGTTTTGTGAATT+TGG + Chr2:58114406-58114425 MsG0280009789.01.T01:intron 30.0%
!! GGAGATTGTTTTGTGAATTT+GGG + Chr2:58114407-58114426 MsG0280009789.01.T01:intron 30.0%
!! TACTTCTGGAAAGTGATTTT+TGG + Chr2:58118339-58118358 MsG0280009789.01.T01:intron 30.0%
!! TGAATTTGGTGATGAATTGT+GGG + Chr2:58114474-58114493 MsG0280009789.01.T01:intron 30.0%
!!! CTGAATTGGGATTTTTTTTG+GGG + Chr2:58114796-58114815 MsG0280009789.01.T01:intron 30.0%
!!! GTGTACTTTTAGGTTTTCTT+TGG + Chr2:58114915-58114934 MsG0280009789.01.T01:intron 30.0%
!!! TGATGTTTTGATTGTATGGA+TGG + Chr2:58117327-58117346 MsG0280009789.01.T01:intron 30.0%
AAAAATATACACGGCCACAA+GGG + Chr2:58115301-58115320 MsG0280009789.01.T01:CDS 35.0%
AACATGCTGATCAGAATAGA+AGG + Chr2:58115633-58115652 MsG0280009789.01.T01:intron 35.0%
AAGAAAGGAAGGAGTAATAG+AGG - Chr2:58113914-58113933 None:intergenic 35.0%
AAGCCACATAGTAGTGTTAA+TGG - Chr2:58119100-58119119 None:intergenic 35.0%
AAGCTCTTCAAATGTGAATG+TGG + Chr2:58116576-58116595 MsG0280009789.01.T01:CDS 35.0%
AATCCGGTTATAAAACCTTC+TGG - Chr2:58119418-58119437 None:intergenic 35.0%
ACAGAAAATCAATGAGAGCA+GGG - Chr2:58120018-58120037 None:intergenic 35.0%
AGTCCATTAACACTACTATG+TGG + Chr2:58119094-58119113 MsG0280009789.01.T01:intron 35.0%
AGTTGTCTCATTCTACTTCT+CGG - Chr2:58117537-58117556 None:intergenic 35.0%
ATCACCTTGAAGTAAACAAG+AGG - Chr2:58114952-58114971 None:intergenic 35.0%
ATCATACCAGAAAGCAAATC+GGG - Chr2:58115440-58115459 None:intergenic 35.0%
ATGATACTATGGCAACAACT+AGG + Chr2:58119493-58119512 MsG0280009789.01.T01:CDS 35.0%
ATGCTGCCATGTAAAAGATT+TGG + Chr2:58119063-58119082 MsG0280009789.01.T01:intron 35.0%
GAAACGCTAAGAGACATAAT+AGG - Chr2:58116892-58116911 None:intergenic 35.0%
GAAGAAAAGACAAGGAACTT+GGG - Chr2:58114046-58114065 None:intergenic 35.0%
GCATTTGTACAGGTAATGAT+TGG + Chr2:58116049-58116068 MsG0280009789.01.T01:intron 35.0%
GCGAAAAACACGTAAATAGA+AGG - Chr2:58114082-58114101 None:intergenic 35.0%
GGTTACATTCTCCATTAGTT+TGG - Chr2:58115596-58115615 None:intergenic 35.0%
GTATTATATATGGGGGGATT+AGG + Chr2:58115044-58115063 MsG0280009789.01.T01:five_prime_UTR 35.0%
GTTGAATACAGTTCAAATGC+AGG + Chr2:58116610-58116629 MsG0280009789.01.T01:CDS 35.0%
TAAAATTACAGGAGAATGGC+AGG + Chr2:58119169-58119188 MsG0280009789.01.T01:intron 35.0%
TAACAATGAAGGCTTCAACT+TGG - Chr2:58117731-58117750 None:intergenic 35.0%
TAACCATATCTCTACCAATC+CGG - Chr2:58119434-58119453 None:intergenic 35.0%
TACAGAAAATCAATGAGAGC+AGG - Chr2:58120019-58120038 None:intergenic 35.0%
TACATCATTCAACATGCTAC+CGG + Chr2:58119389-58119408 MsG0280009789.01.T01:CDS 35.0%
TACCTTATGCTTTACAGTTG+CGG - Chr2:58119001-58119020 None:intergenic 35.0%
TAGATGTCCCTTCTGTAAAA+CGG + Chr2:58116301-58116320 MsG0280009789.01.T01:CDS 35.0%
TAGTGTACCAAGCTCAATTA+TGG - Chr2:58118386-58118405 None:intergenic 35.0%
TCAAAACATAATCGGCAAAC+GGG + Chr2:58115219-58115238 MsG0280009789.01.T01:five_prime_UTR 35.0%
TCAAAACTCTCAGGAACAAT+AGG - Chr2:58119669-58119688 None:intergenic 35.0%
TCACAGTCTAATGACAATGA+TGG + Chr2:58119621-58119640 MsG0280009789.01.T01:CDS 35.0%
TCAGAATAGAAGGAACACTA+AGG + Chr2:58115643-58115662 MsG0280009789.01.T01:intron 35.0%
TCTTTGTGCAACATCTTGAT+CGG - Chr2:58116029-58116048 None:intergenic 35.0%
TGAAAGTTCCGAATTCAACT+CGG + Chr2:58116159-58116178 MsG0280009789.01.T01:CDS 35.0%
TGTTGATCTTGAGGACATAA+TGG + Chr2:58117985-58118004 MsG0280009789.01.T01:CDS 35.0%
TTATGTACTGAAAATCTCCC+TGG + Chr2:58117153-58117172 MsG0280009789.01.T01:intron 35.0%
TTCTTCAACACTCTCAACTT+TGG + Chr2:58114158-58114177 MsG0280009789.01.T01:intron 35.0%
TTGAGGCAAAAATTAGGATG+CGG + Chr2:58116503-58116522 MsG0280009789.01.T01:CDS 35.0%
TTTGCTCAAACTCCAAATAC+AGG - Chr2:58119845-58119864 None:intergenic 35.0%
! AAAGCAAATGCCCATCATTT+TGG + Chr2:58118861-58118880 MsG0280009789.01.T01:intron 35.0%
! AAGCAAATGCCCATCATTTT+GGG + Chr2:58118862-58118881 MsG0280009789.01.T01:intron 35.0%
! AGGGAAATATATGGTTTGGA+TGG - Chr2:58118918-58118937 None:intergenic 35.0%
! ATTTGACCTGTGATCAGTTT+TGG + Chr2:58115546-58115565 MsG0280009789.01.T01:intron 35.0%
! CTCTTTTCTCTATCTTGTGA+TGG + Chr2:58117791-58117810 MsG0280009789.01.T01:intron 35.0%
! GGATTTGAGATACTGATATG+TGG + Chr2:58117425-58117444 MsG0280009789.01.T01:intron 35.0%
! GGTAAGCGAAATTCACATTT+TGG - Chr2:58115935-58115954 None:intergenic 35.0%
! GGTTTGCCAAATCTTTTACA+TGG - Chr2:58119072-58119091 None:intergenic 35.0%
! GTTTGATGGGTAATAAACTC+GGG + Chr2:58115256-58115275 MsG0280009789.01.T01:exon 35.0%
! TATTGTTCCTGAGAGTTTTG+AGG + Chr2:58119668-58119687 MsG0280009789.01.T01:CDS 35.0%
! TGATGTGTAAGCAGTGATTT+TGG + Chr2:58114625-58114644 MsG0280009789.01.T01:intron 35.0%
! TTTGACCTGTGATCAGTTTT+GGG + Chr2:58115547-58115566 MsG0280009789.01.T01:intron 35.0%
!! ACTCGCTTGTTTTCTGAATT+GGG + Chr2:58114783-58114802 MsG0280009789.01.T01:intron 35.0%
!! AGAAGGTTTTATAACCGGAT+TGG + Chr2:58119417-58119436 MsG0280009789.01.T01:CDS 35.0%
!! ATAATTCGCCGTTTTACAGA+AGG - Chr2:58116312-58116331 None:intergenic 35.0%
!! ATAGTAGTGTTAATGGACTC+AGG - Chr2:58119093-58119112 None:intergenic 35.0%
!! GCAAAAAGCACTCTGATAAA+AGG - Chr2:58116136-58116155 None:intergenic 35.0%
!! GTGAATTTGGTGATGAATTG+TGG + Chr2:58114473-58114492 MsG0280009789.01.T01:intron 35.0%
!! GTTCCAGAAGGTTTTATAAC+CGG + Chr2:58119412-58119431 MsG0280009789.01.T01:CDS 35.0%
!! TAATTCGCCGTTTTACAGAA+GGG - Chr2:58116311-58116330 None:intergenic 35.0%
!! TACTCGCTTGTTTTCTGAAT+TGG + Chr2:58114782-58114801 MsG0280009789.01.T01:intron 35.0%
!! TTATAAAACCTTCTGGAACC+CGG - Chr2:58119411-58119430 None:intergenic 35.0%
!!! CTCCTGATGTTTTGATTGTA+TGG + Chr2:58117323-58117342 MsG0280009789.01.T01:intron 35.0%
!!! GCGATTAGCTTTTTAAAAGG+AGG + Chr2:58117404-58117423 MsG0280009789.01.T01:intron 35.0%
AAGACAAGGAACTTGGGAAT+CGG - Chr2:58114040-58114059 None:intergenic 40.0%
ACATCATTCAACATGCTACC+GGG + Chr2:58119390-58119409 MsG0280009789.01.T01:CDS 40.0%
AGGGACATCTAATGCTGTTA+AGG - Chr2:58116292-58116311 None:intergenic 40.0%
ATAGGATAATGTTGCGGGAT+TGG - Chr2:58116874-58116893 None:intergenic 40.0%
ATCAAAAGAAGAGAAGGGGA+TGG + Chr2:58116355-58116374 MsG0280009789.01.T01:CDS 40.0%
ATCCGCAACTGTAAAGCATA+AGG + Chr2:58118996-58119015 MsG0280009789.01.T01:intron 40.0%
ATCGGAAAACGAACCTGAAT+TGG - Chr2:58114022-58114041 None:intergenic 40.0%
CAAAATGAATGCACCATAGC+TGG - Chr2:58117205-58117224 None:intergenic 40.0%
CATGGCAATAGTTTAGGTCA+AGG + Chr2:58119760-58119779 MsG0280009789.01.T01:exon 40.0%
CTAGTAACAGGATACTGTGT+AGG - Chr2:58116185-58116204 None:intergenic 40.0%
GAAAAATATACACGGCCACA+AGG + Chr2:58115300-58115319 MsG0280009789.01.T01:CDS 40.0%
GAAGACAGACAACTAGTAAC+AGG - Chr2:58116197-58116216 None:intergenic 40.0%
GACGATTTCATCGTGTTCAA+TGG - Chr2:58116761-58116780 None:intergenic 40.0%
GAGCATAGATCATGAATCAC+AGG + Chr2:58119530-58119549 MsG0280009789.01.T01:CDS 40.0%
GCACAGCTAAAACATAGTAG+CGG - Chr2:58117577-58117596 None:intergenic 40.0%
GGAAGAAAAGACAAGGAACT+TGG - Chr2:58114047-58114066 None:intergenic 40.0%
GGTGATGAATTGTGGGAATT+TGG + Chr2:58114481-58114500 MsG0280009789.01.T01:intron 40.0%
GTGAACGCTATCATACCTAT+TGG - Chr2:58116839-58116858 None:intergenic 40.0%
GTTGTTGCCATAGTATCATC+TGG - Chr2:58119492-58119511 None:intergenic 40.0%
TAAAACGGCGAATTATGCTG+TGG + Chr2:58116316-58116335 MsG0280009789.01.T01:CDS 40.0%
TAAACCCCAAAACTGATCAC+AGG - Chr2:58115555-58115574 None:intergenic 40.0%
TAATGGTCATGGAAGCAATC+TGG + Chr2:58118002-58118021 MsG0280009789.01.T01:CDS 40.0%
TATAAGTGTCTCACACAGCA+TGG - Chr2:58118606-58118625 None:intergenic 40.0%
TCGGAAAACGAACCTGAATT+GGG - Chr2:58114021-58114040 None:intergenic 40.0%
TCTTGAGGACATAATGGTCA+TGG + Chr2:58117991-58118010 MsG0280009789.01.T01:CDS 40.0%
TGAATCACAGGTAGCTGAAA+CGG + Chr2:58119542-58119561 MsG0280009789.01.T01:CDS 40.0%
TGTGAACCGCTATATTGCAA+GGG - Chr2:58118118-58118137 None:intergenic 40.0%
TTAGGGTTCTTACTTCTTCG+TGG + Chr2:58114282-58114301 MsG0280009789.01.T01:intron 40.0%
TTATTCACCCACAGAAAACC+TGG + Chr2:58119455-58119474 MsG0280009789.01.T01:CDS 40.0%
TTGTGAACCGCTATATTGCA+AGG - Chr2:58118119-58118138 None:intergenic 40.0%
TTTGTAACAGTGTGCTTTGG+TGG + Chr2:58115097-58115116 MsG0280009789.01.T01:five_prime_UTR 40.0%
TTTGTAGAGAGAGAGGATTG+CGG - Chr2:58113965-58113984 None:intergenic 40.0%
! AAGGTGCAAGCTTTGATTCT+AGG - Chr2:58115374-58115393 None:intergenic 40.0%
! CAACTAGGTGTCATGATCAA+TGG + Chr2:58119508-58119527 MsG0280009789.01.T01:CDS 40.0%
! CAGCTATGGTGCATTCATTT+TGG + Chr2:58117203-58117222 MsG0280009789.01.T01:intron 40.0%
! CATCTTGATCGGTTTAGACT+TGG - Chr2:58116018-58116037 None:intergenic 40.0%
! TCAAGGTGATTTTGTCTGCA+GGG + Chr2:58114962-58114981 MsG0280009789.01.T01:intron 40.0%
! TGTTGTCGAAACAGTGGTTT+TGG + Chr2:58114836-58114855 MsG0280009789.01.T01:intron 40.0%
! TTCAAGGTGATTTTGTCTGC+AGG + Chr2:58114961-58114980 MsG0280009789.01.T01:intron 40.0%
! TTGACCTGTGATCAGTTTTG+GGG + Chr2:58115548-58115567 MsG0280009789.01.T01:intron 40.0%
!! AATTATGCTGTGGAGTATCG+TGG + Chr2:58116326-58116345 MsG0280009789.01.T01:CDS 40.0%
!! CTTTGGAACCGAACAACAAT+TGG + Chr2:58114175-58114194 MsG0280009789.01.T01:intron 40.0%
!! GATGCTGACTTCAGGTAATT+TGG + Chr2:58117178-58117197 MsG0280009789.01.T01:intron 40.0%
!! TAACCGGATTGGTAGAGATA+TGG + Chr2:58119428-58119447 MsG0280009789.01.T01:CDS 40.0%
!! TGCAATTTTGGTCAAGGATC+AGG + Chr2:58119879-58119898 MsG0280009789.01.T01:three_prime_UTR 40.0%
!! TGCACAAAGAGCATTTGTAC+AGG + Chr2:58116039-58116058 MsG0280009789.01.T01:CDS 40.0%
!!! TGGGCATTTGCTTTTGACTT+TGG - Chr2:58118855-58118874 None:intergenic 40.0%
AAAAATTAGGATGCGGCAGC+AGG + Chr2:58116510-58116529 MsG0280009789.01.T01:CDS 45.0%
ACCACTCCCTTGCAATATAG+CGG + Chr2:58118109-58118128 MsG0280009789.01.T01:intron 45.0%
AGAGAGAGAAAGAGAGAGAG+AGG - Chr2:58113990-58114009 None:intergenic 45.0%
AGTTGTCTGTCTTCAATGCG+AGG + Chr2:58116203-58116222 MsG0280009789.01.T01:intron 45.0%
ATCTGCTCCTCAAAACTCTC+AGG - Chr2:58119678-58119697 None:intergenic 45.0%
CAAAACATCAGGAGCAGCAT+TGG - Chr2:58117317-58117336 None:intergenic 45.0%
CAAACTCCAAATACAGGACC+CGG - Chr2:58119839-58119858 None:intergenic 45.0%
CAGGTAATTTGGTCCAGCTA+TGG + Chr2:58117189-58117208 MsG0280009789.01.T01:intron 45.0%
CATACAAGCTCGCATCTAGT+AGG + Chr2:58118816-58118835 MsG0280009789.01.T01:intron 45.0%
CTCAGGAACAATAGGTTCTG+TGG - Chr2:58119661-58119680 None:intergenic 45.0%
CTCTTCTGCAAACCCAATTC+AGG + Chr2:58114006-58114025 MsG0280009789.01.T01:five_prime_UTR 45.0%
GAGAGAGAAAGAGAGAGAGA+GGG - Chr2:58113989-58114008 None:intergenic 45.0%
GAGAGAGAGAGAAGAAAGGA+AGG - Chr2:58113925-58113944 None:intergenic 45.0%
GAGAGAGAGAGAGAGAAGAA+AGG - Chr2:58113929-58113948 None:intergenic 45.0%
GCGCTTCATGGCAATAGTTT+AGG + Chr2:58119754-58119773 MsG0280009789.01.T01:exon 45.0%
GTTGCCATAGTATCATCTGG+TGG - Chr2:58119489-58119508 None:intergenic 45.0%
TACGGCAGTTTCTTCATCTC+CGG - Chr2:58115403-58115422 None:intergenic 45.0%
TCTGTTGAAGCAGAAGATCG+TGG + Chr2:58119582-58119601 MsG0280009789.01.T01:CDS 45.0%
! GATTTTGTCTGCAGGGCTTT+TGG + Chr2:58114969-58114988 MsG0280009789.01.T01:intron 45.0%
! GTTGAGTGTTGTCGAAACAG+TGG + Chr2:58114830-58114849 MsG0280009789.01.T01:intron 45.0%
! TCACACGACGTGTGCAATTT+TGG + Chr2:58119867-58119886 MsG0280009789.01.T01:three_prime_UTR 45.0%
! TCTTTCGCTGATGCTACTTC+TGG + Chr2:58119204-58119223 MsG0280009789.01.T01:CDS 45.0%
! TGATGGGTAATAAACTCGGG+AGG + Chr2:58115259-58115278 MsG0280009789.01.T01:exon 45.0%
! TGTGTAGGCCGAGTTGAATT+CGG - Chr2:58116170-58116189 None:intergenic 45.0%
! TTTGGCTTAGGTGAGTGTTG+TGG + Chr2:58114445-58114464 MsG0280009789.01.T01:intron 45.0%
!! AGAGGGTTTTGTAGAGAGAG+AGG - Chr2:58113972-58113991 None:intergenic 45.0%
!! AGCAATCTGGCTTTCGATTC+AGG + Chr2:58118015-58118034 MsG0280009789.01.T01:CDS 45.0%
!! GACGTGTGCAATTTTGGTCA+AGG + Chr2:58119873-58119892 MsG0280009789.01.T01:three_prime_UTR 45.0%
!! TTTTGAGGAGCAGATGATGC+TGG + Chr2:58119683-58119702 MsG0280009789.01.T01:CDS 45.0%
ACCCACAGAAAACCTGGATG+AGG + Chr2:58119461-58119480 MsG0280009789.01.T01:CDS 50.0%
ACCGCTATATTGCAAGGGAG+TGG - Chr2:58118113-58118132 None:intergenic 50.0%
ACCTGAAGTCAGCATCTTCC+AGG - Chr2:58117174-58117193 None:intergenic 50.0%
ACGGCAGTTTCTTCATCTCC+GGG - Chr2:58115402-58115421 None:intergenic 50.0%
ACGTCGATCAGAAGAAGCTG+AGG + Chr2:58115340-58115359 MsG0280009789.01.T01:CDS 50.0%
AGCGATCATCAGCTACGTAG+TGG - Chr2:58119230-58119249 None:intergenic 50.0%
AGGAACACTAAGGTCCCGTT+TGG + Chr2:58115653-58115672 MsG0280009789.01.T01:intron 50.0%
AGGGTCAGTCAAAAGCTGAG+AGG - Chr2:58118693-58118712 None:intergenic 50.0%
CCAAACGGGTCCTAAGCATA+TGG + Chr2:58115874-58115893 MsG0280009789.01.T01:intron 50.0%
CCACAGAAAACCTGGATGAG+GGG + Chr2:58119463-58119482 MsG0280009789.01.T01:CDS 50.0%
CCATATGCTTAGGACCCGTT+TGG - Chr2:58115877-58115896 None:intergenic 50.0%
CCCACAGAAAACCTGGATGA+GGG + Chr2:58119462-58119481 MsG0280009789.01.T01:CDS 50.0%
CCTGAAGTCAGCATCTTCCA+GGG - Chr2:58117173-58117192 None:intergenic 50.0%
CGATGCTTGCCTTGACTATG+TGG + Chr2:58119809-58119828 MsG0280009789.01.T01:three_prime_UTR 50.0%
GCAGGAACTTCAGGATGAAG+AGG + Chr2:58116528-58116547 MsG0280009789.01.T01:CDS 50.0%
TACCTATTGGCCCTAGTAGC+AGG - Chr2:58116826-58116845 None:intergenic 50.0%
TAGACCACCTCCTGCTACTA+GGG + Chr2:58116813-58116832 MsG0280009789.01.T01:CDS 50.0%
TCTTCATCTCCGGGATAGCA+AGG - Chr2:58115393-58115412 None:intergenic 50.0%
TGGGTAATAAACTCGGGAGG+AGG + Chr2:58115262-58115281 MsG0280009789.01.T01:CDS 50.0%
TTAGACCACCTCCTGCTACT+AGG + Chr2:58116812-58116831 MsG0280009789.01.T01:CDS 50.0%
! AAGCTTGCACCTTGCTATCC+CGG + Chr2:58115381-58115400 MsG0280009789.01.T01:CDS 50.0%
! AGAGTGCCCGATTTGCTTTC+TGG + Chr2:58115431-58115450 MsG0280009789.01.T01:CDS 50.0%
! CCCTCATCCAGGTTTTCTGT+GGG - Chr2:58119465-58119484 None:intergenic 50.0%
!! TCAGGAGCAGCATTGGTTCA+AGG - Chr2:58117310-58117329 None:intergenic 50.0%
ACAAGCAAGACCCCCTGATG+GGG - Chr2:58119301-58119320 None:intergenic 55.0%
ACATGCTACCGGGTTCCAGA+AGG + Chr2:58119400-58119419 MsG0280009789.01.T01:CDS 55.0%
ACGCTCAGCAAGAGCTGCAA+TGG - Chr2:58119325-58119344 None:intergenic 55.0%
ACTTGGCATGGCTCGAGCTT+CGG - Chr2:58119727-58119746 None:intergenic 55.0%
AGGTGGTCTAACCATCGGTG+TGG - Chr2:58116803-58116822 None:intergenic 55.0%
CACAAGCAAGACCCCCTGAT+GGG - Chr2:58119302-58119321 None:intergenic 55.0%
CGCTATGCTTCGTCTCCCAT+GGG + Chr2:58119246-58119265 MsG0280009789.01.T01:CDS 55.0%
CGGGCACTCTTCACGATCTA+CGG - Chr2:58115421-58115440 None:intergenic 55.0%
CTATTGGCCCTAGTAGCAGG+AGG - Chr2:58116823-58116842 None:intergenic 55.0%
CTCCTGCTACTAGGGCCAAT+AGG + Chr2:58116821-58116840 MsG0280009789.01.T01:CDS 55.0%
GCAGGAGGTGGTCTAACCAT+CGG - Chr2:58116808-58116827 None:intergenic 55.0%
GCTGAGCGTCAGCAAATGTC+TGG + Chr2:58119336-58119355 MsG0280009789.01.T01:CDS 55.0%
GGGGCCACCAGATGATACTA+TGG + Chr2:58119482-58119501 MsG0280009789.01.T01:CDS 55.0%
TCGCTATGCTTCGTCTCCCA+TGG + Chr2:58119245-58119264 MsG0280009789.01.T01:CDS 55.0%
TTCGTCTCCCATGGGTCAAC+AGG + Chr2:58119254-58119273 MsG0280009789.01.T01:CDS 55.0%
! CAAGTGGACAGAGCGCTTCA+TGG + Chr2:58119742-58119761 MsG0280009789.01.T01:CDS 55.0%
! CATGAAGCGCTCTGTCCACT+TGG - Chr2:58119744-58119763 None:intergenic 55.0%
! CCCCTCATCCAGGTTTTCTG+TGG - Chr2:58119466-58119485 None:intergenic 55.0%
! GGAGCAGATGATGCTGGCTA+TGG + Chr2:58119689-58119708 MsG0280009789.01.T01:CDS 55.0%
! GGAGGAGCAGCGTGTTATTG+AGG + Chr2:58116486-58116505 MsG0280009789.01.T01:intron 55.0%
!! CCCTGGAAGATGCTGACTTC+AGG + Chr2:58117170-58117189 MsG0280009789.01.T01:intron 55.0%
AAGACCCCCTGATGGGGATG+GGG - Chr2:58119295-58119314 None:intergenic 60.0%
ACTCGGGAGGAGGAGACAAG+TGG + Chr2:58115272-58115291 MsG0280009789.01.T01:CDS 60.0%
AGACTCGTGTGCCACACCGA+TGG + Chr2:58116789-58116808 MsG0280009789.01.T01:CDS 60.0%
AGCGCTCTGTCCACTTGGCA+TGG - Chr2:58119739-58119758 None:intergenic 60.0%
CAAGACCCCCTGATGGGGAT+GGG - Chr2:58119296-58119315 None:intergenic 60.0%
CCTCATCCCCATCCCCATCA+GGG + Chr2:58119286-58119305 MsG0280009789.01.T01:CDS 60.0%
CCTTGACTATGTGGCCTGCC+GGG + Chr2:58119818-58119837 MsG0280009789.01.T01:three_prime_UTR 60.0%
CTCATCCCCATCCCCATCAG+GGG + Chr2:58119287-58119306 MsG0280009789.01.T01:CDS 60.0%
CTCCAAATACAGGACCCGGC+AGG - Chr2:58119835-58119854 None:intergenic 60.0%
CTCCCATGGGTCAACAGGCA+GGG + Chr2:58119259-58119278 MsG0280009789.01.T01:CDS 60.0%
GAAGCTCGAGCCATGCCAAG+TGG + Chr2:58119726-58119745 MsG0280009789.01.T01:CDS 60.0%
GATGCGGCAGCAGGAACTTC+AGG + Chr2:58116519-58116538 MsG0280009789.01.T01:CDS 60.0%
GCACAAGCAAGACCCCCTGA+TGG - Chr2:58119303-58119322 None:intergenic 60.0%
GCCTTGACTATGTGGCCTGC+CGG + Chr2:58119817-58119836 MsG0280009789.01.T01:three_prime_UTR 60.0%
GTCCCTGCCTGTTGACCCAT+GGG - Chr2:58119264-58119283 None:intergenic 60.0%
TCATCCCCATCCCCATCAGG+GGG + Chr2:58119288-58119307 MsG0280009789.01.T01:CDS 60.0%
TCCTCATCCCCATCCCCATC+AGG + Chr2:58119285-58119304 MsG0280009789.01.T01:CDS 60.0%
TCTCCCATGGGTCAACAGGC+AGG + Chr2:58119258-58119277 MsG0280009789.01.T01:CDS 60.0%
TGTCCCTGCCTGTTGACCCA+TGG - Chr2:58119265-58119284 None:intergenic 60.0%
TTGGCCCTAGTAGCAGGAGG+TGG - Chr2:58116820-58116839 None:intergenic 60.0%
CATCTGGTGGCCCCTCATCC+AGG - Chr2:58119476-58119495 None:intergenic 65.0%
CCCGGCAGGCCACATAGTCA+AGG - Chr2:58119821-58119840 None:intergenic 65.0%
CCCTGATGGGGATGGGGATG+AGG - Chr2:58119289-58119308 None:intergenic 65.0%
GCAAGACCCCCTGATGGGGA+TGG - Chr2:58119297-58119316 None:intergenic 65.0%
GGCCTGCCGGGTCCTGTATT+TGG + Chr2:58119830-58119849 MsG0280009789.01.T01:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 58113875 58120150 58113875 ID=MsG0280009789.01;Name=MsG0280009789.01
Chr2 mRNA 58113875 58120150 58113875 ID=MsG0280009789.01.T01;Parent=MsG0280009789.01;Name=MsG0280009789.01.T01;_AED=0.34;_eAED=0.34;_QI=431|0.87|0.88|1|0.5|0.55|9|380|428
Chr2 exon 58113875 58114027 58113875 ID=MsG0280009789.01.T01:exon:20942;Parent=MsG0280009789.01.T01
Chr2 exon 58114983 58115452 58114983 ID=MsG0280009789.01.T01:exon:20943;Parent=MsG0280009789.01.T01
Chr2 exon 58116009 58116060 58116009 ID=MsG0280009789.01.T01:exon:20944;Parent=MsG0280009789.01.T01
Chr2 exon 58116144 58116189 58116144 ID=MsG0280009789.01.T01:exon:20945;Parent=MsG0280009789.01.T01
Chr2 exon 58116298 58116385 58116298 ID=MsG0280009789.01.T01:exon:20946;Parent=MsG0280009789.01.T01
Chr2 exon 58116487 58116631 58116487 ID=MsG0280009789.01.T01:exon:20947;Parent=MsG0280009789.01.T01
Chr2 exon 58116737 58116842 58116737 ID=MsG0280009789.01.T01:exon:20948;Parent=MsG0280009789.01.T01
Chr2 exon 58117970 58118036 58117970 ID=MsG0280009789.01.T01:exon:20949;Parent=MsG0280009789.01.T01
Chr2 exon 58119180 58120150 58119180 ID=MsG0280009789.01.T01:exon:20950;Parent=MsG0280009789.01.T01
Chr2 five_prime_UTR 58113875 58114027 58113875 ID=MsG0280009789.01.T01:five_prime_utr;Parent=MsG0280009789.01.T01
Chr2 five_prime_UTR 58114983 58115260 58114983 ID=MsG0280009789.01.T01:five_prime_utr;Parent=MsG0280009789.01.T01
Chr2 CDS 58115261 58115452 58115261 ID=MsG0280009789.01.T01:cds;Parent=MsG0280009789.01.T01
Chr2 CDS 58116009 58116060 58116009 ID=MsG0280009789.01.T01:cds;Parent=MsG0280009789.01.T01
Chr2 CDS 58116144 58116189 58116144 ID=MsG0280009789.01.T01:cds;Parent=MsG0280009789.01.T01
Chr2 CDS 58116298 58116385 58116298 ID=MsG0280009789.01.T01:cds;Parent=MsG0280009789.01.T01
Chr2 CDS 58116487 58116631 58116487 ID=MsG0280009789.01.T01:cds;Parent=MsG0280009789.01.T01
Chr2 CDS 58116737 58116842 58116737 ID=MsG0280009789.01.T01:cds;Parent=MsG0280009789.01.T01
Chr2 CDS 58117970 58118036 58117970 ID=MsG0280009789.01.T01:cds;Parent=MsG0280009789.01.T01
Chr2 CDS 58119180 58119770 58119180 ID=MsG0280009789.01.T01:cds;Parent=MsG0280009789.01.T01
Chr2 three_prime_UTR 58119771 58120150 58119771 ID=MsG0280009789.01.T01:three_prime_utr;Parent=MsG0280009789.01.T01
Gene Sequence

>MsG0280009789.01.T01

ATGGGTAATAAACTCGGGAGGAGGAGACAAGTGGTAGATGAAAAATATACACGGCCACAAGGGTTGTATAATCATAAAGACGTCGATCAGAAGAAGCTGAGGAAGCTAATCCTAGAATCAAAGCTTGCACCTTGCTATCCCGGAGATGAAGAAACTGCCGTAGATCGTGAAGAGTGCCCGATTTGCTTTCTGTATTATCCAAGTCTAAACCGATCAAGATGTTGCACAAAGAGCATTTGTACAGAGTGCTTTTTGCAGATGAAAGTTCCGAATTCAACTCGGCCTACACACATTAGATGTCCCTTCTGTAAAACGGCGAATTATGCTGTGGAGTATCGTGGTGTAAAATCAAAAGAAGAGAAGGGGATGGAACAGATTGAGGAGCAGCGTGTTATTGAGGCAAAAATTAGGATGCGGCAGCAGGAACTTCAGGATGAAGAGGAAAGAATGCATAAAAGACTAGAAGTAAGCTCTTCAAATGTGAATGTGGCTGTTGCAGATGTTGAATACAGTTCAAATGCAGTGGCTGAATCTTCAACATCTGCCATTGAACACGATGAAATCGTCTCTTCTCAAGACTCGTGTGCCACACCGATGGTTAGACCACCTCCTGCTACTAGGGCCAATAGAGATGATGAATTTGATGTTGATCTTGAGGACATAATGGTCATGGAAGCAATCTGGCTTTCGATTCAGGAGAATGGCAGGCAGAAAAATTTATCTTTCGCTGATGCTACTTCTGGCCACTACGTAGCTGATGATCGCTATGCTTCGTCTCCCATGGGTCAACAGGCAGGGACATCCTCATCCCCATCCCCATCAGGGGGTCTTGCTTGTGCCATTGCAGCTCTTGCTGAGCGTCAGCAAATGTCTGGAGAATCATCTGTAAGCTCCAATAATGAAAATACATCATTCAACATGCTACCGGGTTCCAGAAGGTTTTATAACCGGATTGGTAGAGATATGGTTAGTTATTCACCCACAGAAAACCTGGATGAGGGGCCACCAGATGATACTATGGCAACAACTAGGTGTCATGATCAATGGAGCATAGATCATGAATCACAGGTAGCTGAAACGGCAACTAGCTATGCAAACTCTGTTGAAGCAGAAGATCGTGGTGAACTGTCATCTATGTCACAGTCTAATGACAATGATGGAAGCTTTCAAACTGCCACAGAACCTATTGTTCCTGAGAGTTTTGAGGAGCAGATGATGCTGGCTATGGCTGTCTCTTTAGCCGAAGCTCGAGCCATGCCAAGTGGACAGAGCGCTTCATGGCAATAG

Protein sequence

>MsG0280009789.01.T01

MGNKLGRRRQVVDEKYTRPQGLYNHKDVDQKKLRKLILESKLAPCYPGDEETAVDREECPICFLYYPSLNRSRCCTKSICTECFLQMKVPNSTRPTHIRCPFCKTANYAVEYRGVKSKEEKGMEQIEEQRVIEAKIRMRQQELQDEEERMHKRLEVSSSNVNVAVADVEYSSNAVAESSTSAIEHDEIVSSQDSCATPMVRPPPATRANRDDEFDVDLEDIMVMEAIWLSIQENGRQKNLSFADATSGHYVADDRYASSPMGQQAGTSSSPSPSGGLACAIAALAERQQMSGESSVSSNNENTSFNMLPGSRRFYNRIGRDMVSYSPTENLDEGPPDDTMATTRCHDQWSIDHESQVAETATSYANSVEAEDRGELSSMSQSNDNDGSFQTATEPIVPESFEEQMMLAMAVSLAEARAMPSGQSASWQ*