Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000763.01.T01 | XP_003588599.1 | 99.017 | 407 | 4 | 0 | 35 | 441 | 1 | 407 | 0 | 813 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000763.01.T01 | Q9LP45 | 86.035 | 401 | 55 | 1 | 41 | 441 | 6 | 405 | 0 | 674 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000763.01.T01 | G7I549 | 99.017 | 407 | 4 | 0 | 35 | 441 | 1 | 407 | 0.0 | 813 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048202.01 | MsG0180000763.01 | 0.831351 | 1.753445e-55 | 1.897872e-52 |
| MsG0080048919.01 | MsG0180000763.01 | -0.804705 | 1.900317e-49 | 9.865917e-47 |
| MsG0080049066.01 | MsG0180000763.01 | -0.810498 | 1.118590e-50 | 6.753415e-48 |
| MsG0180000763.01 | MsG0180001116.01 | -0.802261 | 6.099912e-49 | 2.974627e-46 |
| MsG0180000763.01 | MsG0180001137.01 | -0.800022 | 1.751409e-48 | 8.069221e-46 |
| MsG0180000763.01 | MsG0180003351.01 | -0.824288 | 8.753881e-54 | 7.720027e-51 |
| MsG0180000763.01 | MsG0180003405.01 | -0.829388 | 5.293094e-55 | 5.409780e-52 |
| MsG0180000763.01 | MsG0180003758.01 | -0.815205 | 1.041525e-51 | 7.134651e-49 |
| MsG0180000763.01 | MsG0180004058.01 | 0.804110 | 2.527633e-49 | 1.292332e-46 |
| MsG0180000763.01 | MsG0180004064.01 | 0.808321 | 3.280679e-50 | 1.870125e-47 |
| MsG0180000763.01 | MsG0180004580.01 | -0.820384 | 7.058201e-53 | 5.576725e-50 |
| MsG0180000763.01 | MsG0180004581.01 | -0.837451 | 5.159028e-57 | 6.704213e-54 |
| MsG0180000763.01 | MsG0180004737.01 | -0.824325 | 8.582521e-54 | 7.577003e-51 |
| MsG0180000763.01 | MsG0180005272.01 | 0.826327 | 2.882769e-54 | 2.694942e-51 |
| MsG0180000763.01 | MsG0180005474.01 | -0.839450 | 1.573474e-57 | 2.173785e-54 |
| MsG0180000763.01 | MsG0180005666.01 | -0.838457 | 2.843400e-57 | 3.810824e-54 |
| MsG0180000763.01 | MsG0180005865.01 | 0.800016 | 1.756371e-48 | 8.090798e-46 |
| MsG0180000763.01 | MsG0280006381.01 | -0.808508 | 2.991782e-50 | 1.713770e-47 |
| MsG0180000763.01 | MsG0280006880.01 | -0.805803 | 1.118981e-49 | 5.975893e-47 |
| MsG0180000763.01 | MsG0280009079.01 | -0.804782 | 1.831110e-49 | 9.525907e-47 |
| MsG0180000763.01 | MsG0280009094.01 | -0.818876 | 1.559354e-52 | 1.181462e-49 |
| MsG0180000763.01 | MsG0280009167.01 | 0.802479 | 5.501693e-49 | 2.697774e-46 |
| MsG0180000763.01 | MsG0280009526.01 | 0.832385 | 9.742088e-56 | 1.087157e-52 |
| MsG0180000763.01 | MsG0280011106.01 | 0.862685 | 4.253329e-64 | 1.256340e-60 |
| MsG0180000763.01 | MsG0280011281.01 | -0.861578 | 9.296939e-64 | 2.643167e-60 |
| MsG0180000763.01 | MsG0380012148.01 | -0.820988 | 5.126024e-53 | 4.118910e-50 |
| MsG0180000763.01 | MsG0380014231.01 | -0.807035 | 6.153255e-50 | 3.391515e-47 |
| MsG0180000763.01 | MsG0380014639.01 | -0.838130 | 3.452437e-57 | 4.580606e-54 |
| MsG0180000763.01 | MsG0380014642.01 | -0.809674 | 1.684038e-50 | 9.950031e-48 |
| MsG0180000763.01 | MsG0380016166.01 | -0.803537 | 3.324589e-49 | 1.675019e-46 |
| MsG0180000763.01 | MsG0380016380.01 | -0.800880 | 1.171258e-48 | 5.515398e-46 |
| MsG0180000763.01 | MsG0380016456.01 | -0.801259 | 9.795816e-49 | 4.657128e-46 |
| MsG0180000763.01 | MsG0380017812.01 | -0.816160 | 6.382511e-52 | 4.488222e-49 |
| MsG0180000763.01 | MsG0480018201.01 | -0.827138 | 1.845745e-54 | 1.766330e-51 |
| MsG0180000763.01 | MsG0480018202.01 | -0.857418 | 1.654444e-62 | 4.080305e-59 |
| MsG0180000763.01 | MsG0480018203.01 | -0.844458 | 7.465423e-59 | 1.205935e-55 |
| MsG0180000763.01 | MsG0480019171.01 | 0.824415 | 8.171274e-54 | 7.232488e-51 |
| MsG0180000763.01 | MsG0480021967.01 | -0.807885 | 4.062167e-50 | 2.288971e-47 |
| MsG0180000763.01 | MsG0480022687.01 | -0.808683 | 2.745005e-50 | 1.579547e-47 |
| MsG0180000763.01 | MsG0480022812.01 | 0.800219 | 1.597292e-48 | 7.396121e-46 |
| MsG0180000763.01 | MsG0480023062.01 | 0.819959 | 8.828991e-53 | 6.894069e-50 |
| MsG0180000763.01 | MsG0480023103.01 | -0.807094 | 5.978283e-50 | 3.300073e-47 |
| MsG0180000763.01 | MsG0480023211.01 | -0.818723 | 1.689209e-52 | 1.274393e-49 |
| MsG0180000763.01 | MsG0480023244.01 | -0.811017 | 8.638293e-51 | 5.288622e-48 |
| MsG0180000763.01 | MsG0480023469.01 | -0.800300 | 1.537451e-48 | 7.134091e-46 |
| MsG0180000763.01 | MsG0480023546.01 | 0.802495 | 5.459109e-49 | 2.677992e-46 |
| MsG0180000763.01 | MsG0480023695.01 | -0.826415 | 2.746699e-54 | 2.574357e-51 |
| MsG0180000763.01 | MsG0480023851.01 | -0.828570 | 8.356004e-55 | 8.337528e-52 |
| MsG0180000763.01 | MsG0580024398.01 | 0.813905 | 2.019837e-51 | 1.335851e-48 |
| MsG0180000763.01 | MsG0580025105.01 | -0.807615 | 4.634809e-50 | 2.593330e-47 |
| MsG0180000763.01 | MsG0580025486.01 | -0.822156 | 2.754327e-53 | 2.286782e-50 |
| MsG0180000763.01 | MsG0580025746.01 | 0.813476 | 2.511208e-51 | 1.641641e-48 |
| MsG0180000763.01 | MsG0580025864.01 | 0.808812 | 2.576818e-50 | 1.487796e-47 |
| MsG0180000763.01 | MsG0580027276.01 | -0.819724 | 9.994153e-53 | 7.752528e-50 |
| MsG0180000763.01 | MsG0580029696.01 | 0.800822 | 1.203233e-48 | 5.657363e-46 |
| MsG0180000763.01 | MsG0580029751.01 | -0.815689 | 8.127967e-52 | 5.642707e-49 |
| MsG0180000763.01 | MsG0680030635.01 | -0.812186 | 4.812091e-51 | 3.038912e-48 |
| MsG0180000763.01 | MsG0680031019.01 | 0.828785 | 7.410062e-55 | 7.439626e-52 |
| MsG0180000763.01 | MsG0680031449.01 | -0.819917 | 9.030360e-53 | 7.042822e-50 |
| MsG0180000763.01 | MsG0680031686.01 | 0.806056 | 9.900608e-50 | 5.321793e-47 |
| MsG0180000763.01 | MsG0680035584.01 | -0.843344 | 1.484801e-58 | 2.316460e-55 |
| MsG0180000763.01 | MsG0780036843.01 | 0.830106 | 3.540535e-55 | 3.694451e-52 |
| MsG0180000763.01 | MsG0780039287.01 | -0.819078 | 1.402379e-52 | 1.068437e-49 |
| MsG0180000763.01 | MsG0780040167.01 | -0.803075 | 4.144344e-49 | 2.063166e-46 |
| MsG0180000763.01 | MsG0780040323.01 | 0.835268 | 1.852339e-56 | 2.253822e-53 |
| MsG0180000763.01 | MsG0780040685.01 | -0.809653 | 1.701122e-50 | 1.004548e-47 |
| MsG0180000763.01 | MsG0780040892.01 | -0.808673 | 2.758646e-50 | 1.586997e-47 |
| MsG0180000763.01 | MsG0780040995.01 | 0.805760 | 1.142400e-49 | 6.094586e-47 |
| MsG0180000763.01 | MsG0780041436.01 | 0.812700 | 3.714693e-51 | 2.378271e-48 |
| MsG0180000763.01 | MsG0780041620.01 | -0.806442 | 8.211390e-50 | 4.457348e-47 |
| MsG0180000763.01 | MsG0780041691.01 | -0.806507 | 7.954322e-50 | 4.325005e-47 |
| MsG0180000763.01 | MsG0780041809.01 | -0.812641 | 3.828320e-51 | 2.447166e-48 |
| MsG0180000763.01 | MsG0880041835.01 | -0.824265 | 8.861940e-54 | 7.810368e-51 |
| MsG0180000763.01 | MsG0880042312.01 | 0.807138 | 5.851187e-50 | 3.233579e-47 |
| MsG0180000763.01 | MsG0880043472.01 | 0.810893 | 9.192435e-51 | 5.609002e-48 |
| MsG0180000763.01 | MsG0880044342.01 | 0.859244 | 4.728414e-63 | 1.240408e-59 |
| MsG0180000763.01 | MsG0880044387.01 | -0.812401 | 4.318358e-51 | 2.743168e-48 |
| MsG0180000763.01 | MsG0880045063.01 | -0.802297 | 5.998792e-49 | 2.928075e-46 |
| MsG0180000763.01 | MsG0880045148.01 | 0.805789 | 1.126505e-49 | 6.013999e-47 |
| MsG0180000763.01 | MsG0880045703.01 | -0.808474 | 3.042200e-50 | 1.741159e-47 |
| MsG0180000763.01 | MsG0880046010.01 | -0.849689 | 2.752357e-60 | 5.260662e-57 |
| MsG0180000763.01 | MsG0880046341.01 | -0.827830 | 1.259611e-54 | 1.229918e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180000763.01 | MsG0880047651.01 | PPI |
| MsG0180000763.01 | MsG0580024507.01 | PPI |
| MsG0180000763.01 | MsG0580024181.01 | PPI |
| MsG0180000763.01 | MsG0180000235.01 | PPI |
| MsG0180000763.01 | MsG0880046253.01 | PPI |
| MsG0180000763.01 | MsG0580025115.01 | PPI |
| MsG0180000763.01 | MsG0380017881.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000763.01.T01 | MTR_1g009010 | 99.017 | 407 | 4 | 0 | 35 | 441 | 1 | 407 | 0.0 | 813 |
| MsG0180000763.01.T01 | MTR_3g109300 | 91.932 | 409 | 33 | 0 | 33 | 441 | 249 | 657 | 0.0 | 736 |
| MsG0180000763.01.T01 | MTR_7g087530 | 24.251 | 334 | 234 | 6 | 89 | 412 | 76 | 400 | 4.25e-21 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000763.01.T01 | AT1G29150 | 86.035 | 401 | 55 | 1 | 41 | 441 | 6 | 405 | 0.0 | 674 |
| MsG0180000763.01.T01 | AT1G29150 | 86.035 | 401 | 55 | 1 | 41 | 441 | 6 | 405 | 0.0 | 674 |
| MsG0180000763.01.T01 | AT2G26990 | 22.756 | 312 | 225 | 6 | 111 | 412 | 95 | 400 | 8.94e-16 | 79.7 |
Find 108 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATAATTTCAGGGATCTTT+TGG | 0.192366 | 1:-10789207 | None:intergenic |
| AAGCAGTTTCAAATAATTTC+AGG | 0.248613 | 1:-10789217 | None:intergenic |
| TACACAGCAACATGTATTTC+AGG | 0.261616 | 1:-10789073 | None:intergenic |
| GCAATATCTTGGACCTGATT+TGG | 0.308447 | 1:+10789154 | MsG0180000763.01.T01:CDS |
| ACCATGTCTGGTGTTGCCTT+TGG | 0.335422 | 1:+10789739 | MsG0180000763.01.T01:three_prime_UTR |
| ATATTGCAGGCCTGCTTTAG+AGG | 0.337336 | 1:-10789138 | None:intergenic |
| TCTTTCATGCGCAGAGCATC+AGG | 0.340066 | 1:-10788444 | None:intergenic |
| TTCAGGCTAAAGACGGCTTT+GGG | 0.358755 | 1:-10789056 | None:intergenic |
| CAAGAAGTTCGCTGGGACAT+TGG | 0.366159 | 1:+10789436 | MsG0180000763.01.T01:CDS |
| GCTTTCATTGCATCCAAATC+AGG | 0.369042 | 1:-10789167 | None:intergenic |
| TTTCAGGCTAAAGACGGCTT+TGG | 0.375816 | 1:-10789057 | None:intergenic |
| CAAGCTTTGACTCTCCTTAG+TGG | 0.388037 | 1:+10788759 | MsG0180000763.01.T01:CDS |
| TTAGAAACCATTCTAATGTT+GGG | 0.392056 | 1:+10789524 | MsG0180000763.01.T01:CDS |
| CCTTCTCAGGCAAGAGAATA+GGG | 0.395870 | 1:+10788491 | MsG0180000763.01.T01:CDS |
| AATCCCACTCTGCAAATCTA+TGG | 0.395909 | 1:-10788952 | None:intergenic |
| AGAATGGTTTCTAAAGTTGC+AGG | 0.399109 | 1:-10789515 | None:intergenic |
| CTTTCGCTCCACGTGATCAA+TGG | 0.400421 | 1:-10789393 | None:intergenic |
| CGAGACTTCAAGGCACAGTT+GGG | 0.400670 | 1:+10789242 | MsG0180000763.01.T01:CDS |
| TTTGACTCTCCTTAGTGGCT+TGG | 0.409710 | 1:+10788764 | MsG0180000763.01.T01:CDS |
| AACTGCTTTACGAGACTTCA+AGG | 0.415681 | 1:+10789232 | MsG0180000763.01.T01:CDS |
| TACTCTTCTGATGGAAAGTA+AGG | 0.419643 | 1:+10788728 | MsG0180000763.01.T01:CDS |
| CAAACCTCACCGACCTTCTC+AGG | 0.419854 | 1:+10788478 | MsG0180000763.01.T01:CDS |
| ATCCCTGTATGATACCCTTC+TGG | 0.426885 | 1:+10789295 | MsG0180000763.01.T01:CDS |
| AAAGCAGGCCTGCAATATCT+TGG | 0.428220 | 1:+10789143 | MsG0180000763.01.T01:CDS |
| TCCATTCTTTATCGTGTACT+TGG | 0.428345 | 1:+10788405 | MsG0180000763.01.T01:CDS |
| GCTTGGTCAAAGAGGTTAGA+AGG | 0.428699 | 1:+10788781 | MsG0180000763.01.T01:CDS |
| TTTAGAAACCATTCTAATGT+TGG | 0.429157 | 1:+10789523 | MsG0180000763.01.T01:CDS |
| ACCTTCTCAGGCAAGAGAAT+AGG | 0.449371 | 1:+10788490 | MsG0180000763.01.T01:CDS |
| GTCTATTGCTCAGGCATTGG+AGG | 0.453941 | 1:+10788359 | MsG0180000763.01.T01:CDS |
| GAGATCTCATGTCATTATCT+TGG | 0.457490 | 1:-10789578 | None:intergenic |
| AGCAGTTTCAAATAATTTCA+GGG | 0.458625 | 1:-10789216 | None:intergenic |
| AATTTCACTATGCAAAGAAA+TGG | 0.464269 | 1:+10788644 | MsG0180000763.01.T01:CDS |
| AGCTGTTCTTGCAGCTGTGA+GGG | 0.469625 | 1:-10788892 | None:intergenic |
| GCAATTTCAACCCTTGAGAA+TGG | 0.470337 | 1:-10789344 | None:intergenic |
| GTTTATCACTAAACCATGTC+TGG | 0.470613 | 1:+10789727 | MsG0180000763.01.T01:three_prime_UTR |
| CGACTTTCCCAACATTAGAA+TGG | 0.470647 | 1:-10789531 | None:intergenic |
| CCTCTTTGACCAAGCCACTA+AGG | 0.474592 | 1:-10788773 | None:intergenic |
| GCTCCAGAAGGGTATCATAC+AGG | 0.475823 | 1:-10789298 | None:intergenic |
| TTTCGCTCCACGTGATCAAT+GGG | 0.485219 | 1:-10789392 | None:intergenic |
| AATCAGGTCCAAGATATTGC+AGG | 0.487957 | 1:-10789151 | None:intergenic |
| GATTCTGTTGCTAAAATACC+AGG | 0.490110 | 1:+10788606 | MsG0180000763.01.T01:CDS |
| GGGATGATCCAATCGTTCAT+AGG | 0.490676 | 1:+10789264 | MsG0180000763.01.T01:CDS |
| TGCTCTGCGCATGAAAGAGC+AGG | 0.492288 | 1:+10788449 | MsG0180000763.01.T01:CDS |
| CCCTATTCTCTTGCCTGAGA+AGG | 0.492528 | 1:-10788491 | None:intergenic |
| TAGACATAGATGAGAATCTC+TGG | 0.492707 | 1:+10787440 | None:intergenic |
| CACAACAGAGTCTATTGCTC+AGG | 0.495213 | 1:+10788350 | MsG0180000763.01.T01:CDS |
| AGAGTCTATTGCTCAGGCAT+TGG | 0.499267 | 1:+10788356 | MsG0180000763.01.T01:CDS |
| ACCAAGTACACGATAAAGAA+TGG | 0.500491 | 1:-10788406 | None:intergenic |
| CAGCTGTTCTTGCAGCTGTG+AGG | 0.517302 | 1:-10788893 | None:intergenic |
| CTTTCTGAGGCAGCGAATTG+AGG | 0.519044 | 1:+10788695 | MsG0180000763.01.T01:CDS |
| GTCAAGTGCCTATGAACGAT+TGG | 0.521697 | 1:-10789272 | None:intergenic |
| GGGACATTGGATCAAGGTGC+TGG | 0.531380 | 1:+10789449 | MsG0180000763.01.T01:CDS |
| TCTATGGCACCTTGTTGAGC+TGG | 0.543072 | 1:-10788936 | None:intergenic |
| GCAATAGACTCTGTTGTGGC+AGG | 0.543654 | 1:-10788345 | None:intergenic |
| CTCCAGAAGGGTATCATACA+GGG | 0.544409 | 1:-10789297 | None:intergenic |
| CTCAATTCGCTGCCTCAGAA+AGG | 0.545619 | 1:-10788694 | None:intergenic |
| TGCAAAGATTCTGCTCCAGA+AGG | 0.549152 | 1:-10789310 | None:intergenic |
| CATGTTGCTGTGTAAGATCA+TGG | 0.549562 | 1:+10789082 | MsG0180000763.01.T01:CDS |
| AATTAAATGCATGCAAGCGT+TGG | 0.550376 | 1:+10789789 | MsG0180000763.01.T01:three_prime_UTR |
| CGAGCTTCCCATTGATCACG+TGG | 0.562921 | 1:+10789385 | MsG0180000763.01.T01:CDS |
| ACGAGACTTCAAGGCACAGT+TGG | 0.565359 | 1:+10789241 | MsG0180000763.01.T01:CDS |
| CCTTAGTGGCTTGGTCAAAG+AGG | 0.571283 | 1:+10788773 | MsG0180000763.01.T01:CDS |
| AGAGCATCAGGGGATGAAGA+AGG | 0.572998 | 1:-10788432 | None:intergenic |
| GATTGATTGAACCATTCTCA+AGG | 0.573343 | 1:+10789333 | MsG0180000763.01.T01:CDS |
| GATTCTTCATGCTGAAGAGA+AGG | 0.574447 | 1:+10788971 | MsG0180000763.01.T01:CDS |
| TTTCTTACTGATGAGAAGGA+TGG | 0.574941 | 1:+10789648 | MsG0180000763.01.T01:three_prime_UTR |
| GTGCCATAGATTTGCAGAGT+GGG | 0.575197 | 1:+10788949 | MsG0180000763.01.T01:CDS |
| TTCGCTGGGACATTGGATCA+AGG | 0.575199 | 1:+10789443 | MsG0180000763.01.T01:CDS |
| GCAAGTCTATGTCTACAAGT+AGG | 0.577240 | 1:-10788818 | None:intergenic |
| TCCAAAGGCAACACCAGACA+TGG | 0.579472 | 1:-10789740 | None:intergenic |
| CTTTCATGCGCAGAGCATCA+GGG | 0.581958 | 1:-10788443 | None:intergenic |
| AAGAAGACATGGCTGCAGCT+AGG | 0.582628 | 1:-10788317 | None:intergenic |
| GGAATCATATCCTCTAAAGC+AGG | 0.583289 | 1:+10789128 | MsG0180000763.01.T01:CDS |
| AATGACATGAGATCTCCATC+TGG | 0.583733 | 1:+10789585 | MsG0180000763.01.T01:exon |
| TAGACTCTGTTGTGGCAGGA+AGG | 0.584069 | 1:-10788341 | None:intergenic |
| CATGTATTTCAGGCTAAAGA+CGG | 0.589827 | 1:-10789063 | None:intergenic |
| AAGGCTTGCTACTCTTCTGA+TGG | 0.595479 | 1:+10788719 | MsG0180000763.01.T01:CDS |
| TGAGGCAGCGAATTGAGGCA+AGG | 0.595879 | 1:+10788700 | MsG0180000763.01.T01:CDS |
| AGTCAAGCTGATGATGTGGC+TGG | 0.596537 | 1:+10789107 | MsG0180000763.01.T01:CDS |
| ATGGCACCTTGTTGAGCTGG+TGG | 0.598642 | 1:-10788933 | None:intergenic |
| ATTTGTAACTCAGATGTCCC+TGG | 0.601526 | 1:-10788624 | None:intergenic |
| TTTCATGCGCAGAGCATCAG+GGG | 0.602569 | 1:-10788442 | None:intergenic |
| GTTGACACAAGATACGGCAC+AGG | 0.608305 | 1:-10787500 | None:intergenic |
| CTTGCCTGAGAAGGTCGGTG+AGG | 0.609314 | 1:-10788482 | None:intergenic |
| TGTCAAACGAAGTAACCAGA+TGG | 0.609481 | 1:-10789600 | None:intergenic |
| ATTGATTGAACCATTCTCAA+GGG | 0.609884 | 1:+10789334 | MsG0180000763.01.T01:CDS |
| GCAGCCTTCTCACTCAGTTG+AGG | 0.611712 | 1:+10788526 | MsG0180000763.01.T01:CDS |
| AAAGCGGTTGACACAAGATA+CGG | 0.612108 | 1:-10787506 | None:intergenic |
| GCAAAGATTCTGCTCCAGAA+GGG | 0.618885 | 1:-10789309 | None:intergenic |
| ATGACCTCAACTGAGTGAGA+AGG | 0.626789 | 1:-10788530 | None:intergenic |
| ATGAAAAGCGTACCTTTCTG+AGG | 0.631690 | 1:+10788682 | MsG0180000763.01.T01:CDS |
| TATGCAAAGAAATGGTGCAA+TGG | 0.632106 | 1:+10788652 | MsG0180000763.01.T01:CDS |
| GGCAGGAAGGAAAGAAGACA+TGG | 0.635532 | 1:-10788328 | None:intergenic |
| ATTCTCTTGCCTGAGAAGGT+CGG | 0.636643 | 1:-10788487 | None:intergenic |
| TTCTAATGTTGGGAAAGTCG+TGG | 0.638657 | 1:+10789534 | MsG0180000763.01.T01:CDS |
| AAAACACAAGATGAATCCAA+AGG | 0.641334 | 1:-10789755 | None:intergenic |
| TAGGATCGTCAAAGATGACA+AGG | 0.650133 | 1:-10789475 | None:intergenic |
| GAGACTTCAAGGCACAGTTG+GGG | 0.656008 | 1:+10789243 | MsG0180000763.01.T01:CDS |
| TATGTTCCACCAGCTCAACA+AGG | 0.660678 | 1:+10788927 | MsG0180000763.01.T01:CDS |
| GGTTAGTCAAGCTGATGATG+TGG | 0.670365 | 1:+10789103 | MsG0180000763.01.T01:CDS |
| AATCTCTGGTAAAATTTGTG+AGG | 0.670498 | 1:+10787454 | MsG0180000763.01.T01:CDS |
| AAAACTGCAAAGATTGTGAG+GGG | 0.672793 | 1:+10788576 | MsG0180000763.01.T01:CDS |
| ATTCTGTTGCTAAAATACCA+GGG | 0.677431 | 1:+10788607 | MsG0180000763.01.T01:CDS |
| TTGACACAAGATACGGCACA+GGG | 0.687597 | 1:-10787499 | None:intergenic |
| AGACTTCAAGGCACAGTTGG+GGG | 0.696743 | 1:+10789244 | MsG0180000763.01.T01:CDS |
| CTGAGCAATAGACTCTGTTG+TGG | 0.698808 | 1:-10788349 | None:intergenic |
| GGTTTGTCAAGTGACAAAAG+CGG | 0.731343 | 1:-10787522 | None:intergenic |
| GGTGCCATAGATTTGCAGAG+TGG | 0.753705 | 1:+10788948 | MsG0180000763.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATACATTTTGTCAA+TGG | - | Chr1:10788285-10788304 | None:intergenic | 15.0% |
| !! | AAATTGAAAAGTAAACTTCA+CGG | - | Chr1:10787915-10787934 | None:intergenic | 20.0% |
| ! | AAATTCCATTAGATGATCAT+GGG | - | Chr1:10788179-10788198 | None:intergenic | 25.0% |
| ! | AAGCAGTTTCAAATAATTTC+AGG | - | Chr1:10789220-10789239 | None:intergenic | 25.0% |
| ! | AATTTCACTATGCAAAGAAA+TGG | + | Chr1:10788644-10788663 | MsG0180000763.01.T01:CDS | 25.0% |
| ! | AGCAGTTTCAAATAATTTCA+GGG | - | Chr1:10789219-10789238 | None:intergenic | 25.0% |
| ! | ATAATACATGTAGAGTGTAA+TGG | + | Chr1:10787801-10787820 | MsG0180000763.01.T01:intron | 25.0% |
| ! | CAAATATACAAAGGAAAAGA+AGG | - | Chr1:10787971-10787990 | None:intergenic | 25.0% |
| ! | CTGTAATACCAAATATACAA+AGG | - | Chr1:10787980-10787999 | None:intergenic | 25.0% |
| ! | TTAGAAACCATTCTAATGTT+GGG | + | Chr1:10789524-10789543 | MsG0180000763.01.T01:CDS | 25.0% |
| ! | TTTAGAAACCATTCTAATGT+TGG | + | Chr1:10789523-10789542 | MsG0180000763.01.T01:CDS | 25.0% |
| !! | AAATAATTTCAGGGATCTTT+TGG | - | Chr1:10789210-10789229 | None:intergenic | 25.0% |
| !! | CTTCTTTTCCTTTGTATATT+TGG | + | Chr1:10787969-10787988 | MsG0180000763.01.T01:intron | 25.0% |
| !!! | AGATTTGGTTTTTCTGATTT+GGG | - | Chr1:10787546-10787565 | None:intergenic | 25.0% |
| !!! | GGTTTTACTTTGGTTTTATA+CGG | - | Chr1:10787894-10787913 | None:intergenic | 25.0% |
| AAAAACTGCAAAGATTGTGA+GGG | + | Chr1:10788575-10788594 | MsG0180000763.01.T01:CDS | 30.0% | |
| AAAACACAAGATGAATCCAA+AGG | - | Chr1:10789758-10789777 | None:intergenic | 30.0% | |
| AATCTCTGGTAAAATTTGTG+AGG | + | Chr1:10787454-10787473 | MsG0180000763.01.T01:CDS | 30.0% | |
| ATGTATTATACTGCTATACC+AGG | - | Chr1:10787790-10787809 | None:intergenic | 30.0% | |
| ATTCTGTTGCTAAAATACCA+GGG | + | Chr1:10788607-10788626 | MsG0180000763.01.T01:CDS | 30.0% | |
| ATTGATTGAACCATTCTCAA+GGG | + | Chr1:10789334-10789353 | MsG0180000763.01.T01:CDS | 30.0% | |
| CAAATTCCATTAGATGATCA+TGG | - | Chr1:10788180-10788199 | None:intergenic | 30.0% | |
| GAAAGATATAGTGTAAGAGA+AGG | - | Chr1:10788213-10788232 | None:intergenic | 30.0% | |
| ! | ATTTGAAGCAGAAATTGCAA+AGG | - | Chr1:10787836-10787855 | None:intergenic | 30.0% |
| ! | GGATATATAGCATCAGTTTT+AGG | - | Chr1:10789497-10789516 | None:intergenic | 30.0% |
| ! | TAAACTTCACGGTTTTACTT+TGG | - | Chr1:10787904-10787923 | None:intergenic | 30.0% |
| ! | TTGTTTTCTTACTGATGAGA+AGG | + | Chr1:10789644-10789663 | MsG0180000763.01.T01:three_prime_UTR | 30.0% |
| !!! | CAGATTTGGTTTTTCTGATT+TGG | - | Chr1:10787547-10787566 | None:intergenic | 30.0% |
| !!! | TGCTTTGGGAAGATTTTTTA+AGG | - | Chr1:10788865-10788884 | None:intergenic | 30.0% |
| AAAACTGCAAAGATTGTGAG+GGG | + | Chr1:10788576-10788595 | MsG0180000763.01.T01:CDS | 35.0% | |
| AATTAAATGCATGCAAGCGT+TGG | + | Chr1:10789789-10789808 | MsG0180000763.01.T01:three_prime_UTR | 35.0% | |
| ACAGGTAGTCTAATCAGATT+TGG | - | Chr1:10787561-10787580 | None:intergenic | 35.0% | |
| ACCAAGTACACGATAAAGAA+TGG | - | Chr1:10788409-10788428 | None:intergenic | 35.0% | |
| AGTTTCGAACCTAGTTAAAG+AGG | - | Chr1:10788124-10788143 | None:intergenic | 35.0% | |
| CAAAAACTGCAAAGATTGTG+AGG | + | Chr1:10788574-10788593 | MsG0180000763.01.T01:CDS | 35.0% | |
| CATGTATTTCAGGCTAAAGA+CGG | - | Chr1:10789066-10789085 | None:intergenic | 35.0% | |
| CTTTAACTAGGTTCGAAACT+TGG | + | Chr1:10788124-10788143 | MsG0180000763.01.T01:intron | 35.0% | |
| GACTTGTCAGTAGTGTTAAT+GGG | + | Chr1:10788077-10788096 | MsG0180000763.01.T01:intron | 35.0% | |
| GAGATCTCATGTCATTATCT+TGG | - | Chr1:10789581-10789600 | None:intergenic | 35.0% | |
| GATTCTGTTGCTAAAATACC+AGG | + | Chr1:10788606-10788625 | MsG0180000763.01.T01:CDS | 35.0% | |
| GATTGATTGAACCATTCTCA+AGG | + | Chr1:10789333-10789352 | MsG0180000763.01.T01:CDS | 35.0% | |
| GTTTATCACTAAACCATGTC+TGG | + | Chr1:10789727-10789746 | MsG0180000763.01.T01:three_prime_UTR | 35.0% | |
| TACACAGCAACATGTATTTC+AGG | - | Chr1:10789076-10789095 | None:intergenic | 35.0% | |
| TACTCTTCTGATGGAAAGTA+AGG | + | Chr1:10788728-10788747 | MsG0180000763.01.T01:CDS | 35.0% | |
| TATGCAAAGAAATGGTGCAA+TGG | + | Chr1:10788652-10788671 | MsG0180000763.01.T01:CDS | 35.0% | |
| TCCATTCTTTATCGTGTACT+TGG | + | Chr1:10788405-10788424 | MsG0180000763.01.T01:CDS | 35.0% | |
| TTTCTTACTGATGAGAAGGA+TGG | + | Chr1:10789648-10789667 | MsG0180000763.01.T01:three_prime_UTR | 35.0% | |
| ! | AATCTTTGCAGTTTTTGCCT+TGG | - | Chr1:10788571-10788590 | None:intergenic | 35.0% |
| ! | ATCTTTGCAGTTTTTGCCTT+GGG | - | Chr1:10788570-10788589 | None:intergenic | 35.0% |
| ! | ATTCTTTTCCTTGATTCCCA+AGG | + | Chr1:10788551-10788570 | MsG0180000763.01.T01:CDS | 35.0% |
| ! | ATTTTAGACAAGAAGTTCGC+TGG | + | Chr1:10789428-10789447 | MsG0180000763.01.T01:CDS | 35.0% |
| ! | TGACTTGTCAGTAGTGTTAA+TGG | + | Chr1:10788076-10788095 | MsG0180000763.01.T01:intron | 35.0% |
| ! | TTTTAGACAAGAAGTTCGCT+GGG | + | Chr1:10789429-10789448 | MsG0180000763.01.T01:CDS | 35.0% |
| !! | AGAATGGTTTCTAAAGTTGC+AGG | - | Chr1:10789518-10789537 | None:intergenic | 35.0% |
| !! | TTAATGGGTTTGCAAGGTTT+GGG | + | Chr1:10788092-10788111 | MsG0180000763.01.T01:intron | 35.0% |
| AAAGCGGTTGACACAAGATA+CGG | - | Chr1:10787509-10787528 | None:intergenic | 40.0% | |
| AACTGCTTTACGAGACTTCA+AGG | + | Chr1:10789232-10789251 | MsG0180000763.01.T01:CDS | 40.0% | |
| AATCAGGTCCAAGATATTGC+AGG | - | Chr1:10789154-10789173 | None:intergenic | 40.0% | |
| AATCCCACTCTGCAAATCTA+TGG | - | Chr1:10788955-10788974 | None:intergenic | 40.0% | |
| AATGACATGAGATCTCCATC+TGG | + | Chr1:10789585-10789604 | MsG0180000763.01.T01:exon | 40.0% | |
| ATTTGTAACTCAGATGTCCC+TGG | - | Chr1:10788627-10788646 | None:intergenic | 40.0% | |
| CATGTTGCTGTGTAAGATCA+TGG | + | Chr1:10789082-10789101 | MsG0180000763.01.T01:CDS | 40.0% | |
| CGACTTTCCCAACATTAGAA+TGG | - | Chr1:10789534-10789553 | None:intergenic | 40.0% | |
| CTCATCAATGTCAAGAGAAC+AGG | - | Chr1:10787579-10787598 | None:intergenic | 40.0% | |
| GATAGTAATGCACAACTCGT+TGG | + | Chr1:10788244-10788263 | MsG0180000763.01.T01:intron | 40.0% | |
| GATTCTTCATGCTGAAGAGA+AGG | + | Chr1:10788971-10788990 | MsG0180000763.01.T01:CDS | 40.0% | |
| GCAAGTCTATGTCTACAAGT+AGG | - | Chr1:10788821-10788840 | None:intergenic | 40.0% | |
| GCAATATCTTGGACCTGATT+TGG | + | Chr1:10789154-10789173 | MsG0180000763.01.T01:CDS | 40.0% | |
| GCAATTTCAACCCTTGAGAA+TGG | - | Chr1:10789347-10789366 | None:intergenic | 40.0% | |
| GCTTTCATTGCATCCAAATC+AGG | - | Chr1:10789170-10789189 | None:intergenic | 40.0% | |
| GGTTTGTCAAGTGACAAAAG+CGG | - | Chr1:10787525-10787544 | None:intergenic | 40.0% | |
| TAGGATCGTCAAAGATGACA+AGG | - | Chr1:10789478-10789497 | None:intergenic | 40.0% | |
| TGTCAAACGAAGTAACCAGA+TGG | - | Chr1:10789603-10789622 | None:intergenic | 40.0% | |
| TGTCTCCCATGATCATCTAA+TGG | + | Chr1:10788171-10788190 | MsG0180000763.01.T01:intron | 40.0% | |
| TTAGATGATCATGGGAGACA+TGG | - | Chr1:10788171-10788190 | None:intergenic | 40.0% | |
| TTCTAATGTTGGGAAAGTCG+TGG | + | Chr1:10789534-10789553 | MsG0180000763.01.T01:CDS | 40.0% | |
| ! | AGTTTTTGCCTTGGGAATCA+AGG | - | Chr1:10788562-10788581 | None:intergenic | 40.0% |
| ! | ATGAAAAGCGTACCTTTCTG+AGG | + | Chr1:10788682-10788701 | MsG0180000763.01.T01:CDS | 40.0% |
| ! | TCGTGGACAGTCTTTTTGTT+AGG | + | Chr1:10789551-10789570 | MsG0180000763.01.T01:CDS | 40.0% |
| !! | GGAATCATATCCTCTAAAGC+AGG | + | Chr1:10789128-10789147 | MsG0180000763.01.T01:CDS | 40.0% |
| !! | GTAGTGTTAATGGGTTTGCA+AGG | + | Chr1:10788086-10788105 | MsG0180000763.01.T01:intron | 40.0% |
| !! | GTTAATGGGTTTGCAAGGTT+TGG | + | Chr1:10788091-10788110 | MsG0180000763.01.T01:intron | 40.0% |
| !! | TAATGGGTTTGCAAGGTTTG+GGG | + | Chr1:10788093-10788112 | MsG0180000763.01.T01:intron | 40.0% |
| AAAGCAGGCCTGCAATATCT+TGG | + | Chr1:10789143-10789162 | MsG0180000763.01.T01:CDS | 45.0% | |
| ACCTTCTCAGGCAAGAGAAT+AGG | + | Chr1:10788490-10788509 | MsG0180000763.01.T01:CDS | 45.0% | |
| AGAGTCTATTGCTCAGGCAT+TGG | + | Chr1:10788356-10788375 | MsG0180000763.01.T01:CDS | 45.0% | |
| ATATTGCAGGCCTGCTTTAG+AGG | - | Chr1:10789141-10789160 | None:intergenic | 45.0% | |
| ATCCCTGTATGATACCCTTC+TGG | + | Chr1:10789295-10789314 | MsG0180000763.01.T01:CDS | 45.0% | |
| ATGACCTCAACTGAGTGAGA+AGG | - | Chr1:10788533-10788552 | None:intergenic | 45.0% | |
| ATTCTCTTGCCTGAGAAGGT+CGG | - | Chr1:10788490-10788509 | None:intergenic | 45.0% | |
| CACAACAGAGTCTATTGCTC+AGG | + | Chr1:10788350-10788369 | MsG0180000763.01.T01:CDS | 45.0% | |
| CACAGTCACACATCAATGTG+CGG | - | Chr1:10787748-10787767 | None:intergenic | 45.0% | |
| CCTTCTCAGGCAAGAGAATA+GGG | + | Chr1:10788491-10788510 | MsG0180000763.01.T01:CDS | 45.0% | |
| CTGAGCAATAGACTCTGTTG+TGG | - | Chr1:10788352-10788371 | None:intergenic | 45.0% | |
| GCAAAGATTCTGCTCCAGAA+GGG | - | Chr1:10789312-10789331 | None:intergenic | 45.0% | |
| GCTTGGTCAAAGAGGTTAGA+AGG | + | Chr1:10788781-10788800 | MsG0180000763.01.T01:CDS | 45.0% | |
| GGGATGATCCAATCGTTCAT+AGG | + | Chr1:10789264-10789283 | MsG0180000763.01.T01:CDS | 45.0% | |
| GGGGATCTTCCTCTTTAACT+AGG | + | Chr1:10788112-10788131 | MsG0180000763.01.T01:intron | 45.0% | |
| GTCAAGTGCCTATGAACGAT+TGG | - | Chr1:10789275-10789294 | None:intergenic | 45.0% | |
| GTGCCATAGATTTGCAGAGT+GGG | + | Chr1:10788949-10788968 | MsG0180000763.01.T01:CDS | 45.0% | |
| TATGTTCCACCAGCTCAACA+AGG | + | Chr1:10788927-10788946 | MsG0180000763.01.T01:CDS | 45.0% | |
| TGCAAAGATTCTGCTCCAGA+AGG | - | Chr1:10789313-10789332 | None:intergenic | 45.0% | |
| TTCAGGCTAAAGACGGCTTT+GGG | - | Chr1:10789059-10789078 | None:intergenic | 45.0% | |
| TTGACACAAGATACGGCACA+GGG | - | Chr1:10787502-10787521 | None:intergenic | 45.0% | |
| TTTCAGGCTAAAGACGGCTT+TGG | - | Chr1:10789060-10789079 | None:intergenic | 45.0% | |
| TTTCGCTCCACGTGATCAAT+GGG | - | Chr1:10789395-10789414 | None:intergenic | 45.0% | |
| TTTGACTCTCCTTAGTGGCT+TGG | + | Chr1:10788764-10788783 | MsG0180000763.01.T01:CDS | 45.0% | |
| ! | CAAGCTTTGACTCTCCTTAG+TGG | + | Chr1:10788759-10788778 | MsG0180000763.01.T01:CDS | 45.0% |
| ! | GGTTAGTCAAGCTGATGATG+TGG | + | Chr1:10789103-10789122 | MsG0180000763.01.T01:CDS | 45.0% |
| !! | AAGGCTTGCTACTCTTCTGA+TGG | + | Chr1:10788719-10788738 | MsG0180000763.01.T01:CDS | 45.0% |
| !! | CTCCAGAAGGGTATCATACA+GGG | - | Chr1:10789300-10789319 | None:intergenic | 45.0% |
| AAGAAGACATGGCTGCAGCT+AGG | - | Chr1:10788320-10788339 | None:intergenic | 50.0% | |
| ACGAGACTTCAAGGCACAGT+TGG | + | Chr1:10789241-10789260 | MsG0180000763.01.T01:CDS | 50.0% | |
| AGACTTCAAGGCACAGTTGG+GGG | + | Chr1:10789244-10789263 | MsG0180000763.01.T01:CDS | 50.0% | |
| AGCTGTTCTTGCAGCTGTGA+GGG | - | Chr1:10788895-10788914 | None:intergenic | 50.0% | |
| AGTGTAAGAGAAGGCGATGC+AGG | - | Chr1:10788204-10788223 | None:intergenic | 50.0% | |
| CAAGAAGTTCGCTGGGACAT+TGG | + | Chr1:10789436-10789455 | MsG0180000763.01.T01:CDS | 50.0% | |
| CCCTATTCTCTTGCCTGAGA+AGG | - | Chr1:10788494-10788513 | None:intergenic | 50.0% | |
| CCTCTTTGACCAAGCCACTA+AGG | - | Chr1:10788776-10788795 | None:intergenic | 50.0% | |
| CGAGACTTCAAGGCACAGTT+GGG | + | Chr1:10789242-10789261 | MsG0180000763.01.T01:CDS | 50.0% | |
| CTCAATTCGCTGCCTCAGAA+AGG | - | Chr1:10788697-10788716 | None:intergenic | 50.0% | |
| CTTTCGCTCCACGTGATCAA+TGG | - | Chr1:10789396-10789415 | None:intergenic | 50.0% | |
| GAGACTTCAAGGCACAGTTG+GGG | + | Chr1:10789243-10789262 | MsG0180000763.01.T01:CDS | 50.0% | |
| GATGTGTGACTGTGTGCTGT+AGG | + | Chr1:10787754-10787773 | MsG0180000763.01.T01:intron | 50.0% | |
| GCAATAGACTCTGTTGTGGC+AGG | - | Chr1:10788348-10788367 | None:intergenic | 50.0% | |
| GGCAGGAAGGAAAGAAGACA+TGG | - | Chr1:10788331-10788350 | None:intergenic | 50.0% | |
| GTTGACACAAGATACGGCAC+AGG | - | Chr1:10787503-10787522 | None:intergenic | 50.0% | |
| TAGACTCTGTTGTGGCAGGA+AGG | - | Chr1:10788344-10788363 | None:intergenic | 50.0% | |
| TCCAAAGGCAACACCAGACA+TGG | - | Chr1:10789743-10789762 | None:intergenic | 50.0% | |
| TCTATGGCACCTTGTTGAGC+TGG | - | Chr1:10788939-10788958 | None:intergenic | 50.0% | |
| TTCGCTGGGACATTGGATCA+AGG | + | Chr1:10789443-10789462 | MsG0180000763.01.T01:CDS | 50.0% | |
| ! | AGAGCATCAGGGGATGAAGA+AGG | - | Chr1:10788435-10788454 | None:intergenic | 50.0% |
| ! | AGTCAAGCTGATGATGTGGC+TGG | + | Chr1:10789107-10789126 | MsG0180000763.01.T01:CDS | 50.0% |
| ! | CTTTCATGCGCAGAGCATCA+GGG | - | Chr1:10788446-10788465 | None:intergenic | 50.0% |
| ! | GGTGCCATAGATTTGCAGAG+TGG | + | Chr1:10788948-10788967 | MsG0180000763.01.T01:CDS | 50.0% |
| ! | GTGAGGGCAGCTTTTGCTTT+GGG | - | Chr1:10788879-10788898 | None:intergenic | 50.0% |
| ! | TCTTTCATGCGCAGAGCATC+AGG | - | Chr1:10788447-10788466 | None:intergenic | 50.0% |
| ! | TGTGAGGGCAGCTTTTGCTT+TGG | - | Chr1:10788880-10788899 | None:intergenic | 50.0% |
| ! | TTTCATGCGCAGAGCATCAG+GGG | - | Chr1:10788445-10788464 | None:intergenic | 50.0% |
| !! | ACCATGTCTGGTGTTGCCTT+TGG | + | Chr1:10789739-10789758 | MsG0180000763.01.T01:three_prime_UTR | 50.0% |
| !! | CCTTAGTGGCTTGGTCAAAG+AGG | + | Chr1:10788773-10788792 | MsG0180000763.01.T01:CDS | 50.0% |
| !! | CTTTCTGAGGCAGCGAATTG+AGG | + | Chr1:10788695-10788714 | MsG0180000763.01.T01:CDS | 50.0% |
| !! | GCTCCAGAAGGGTATCATAC+AGG | - | Chr1:10789301-10789320 | None:intergenic | 50.0% |
| !! | GTCTATTGCTCAGGCATTGG+AGG | + | Chr1:10788359-10788378 | MsG0180000763.01.T01:CDS | 50.0% |
| !! | TGCACAACTCGTTGGCTTTC+AGG | + | Chr1:10788252-10788271 | MsG0180000763.01.T01:intron | 50.0% |
| ATGGCACCTTGTTGAGCTGG+TGG | - | Chr1:10788936-10788955 | None:intergenic | 55.0% | |
| CAAACCTCACCGACCTTCTC+AGG | + | Chr1:10788478-10788497 | MsG0180000763.01.T01:CDS | 55.0% | |
| CAGCTGTTCTTGCAGCTGTG+AGG | - | Chr1:10788896-10788915 | None:intergenic | 55.0% | |
| CGAGCTTCCCATTGATCACG+TGG | + | Chr1:10789385-10789404 | MsG0180000763.01.T01:CDS | 55.0% | |
| GCAGCCTTCTCACTCAGTTG+AGG | + | Chr1:10788526-10788545 | MsG0180000763.01.T01:CDS | 55.0% | |
| GGGACATTGGATCAAGGTGC+TGG | + | Chr1:10789449-10789468 | MsG0180000763.01.T01:CDS | 55.0% | |
| TGAGGCAGCGAATTGAGGCA+AGG | + | Chr1:10788700-10788719 | MsG0180000763.01.T01:CDS | 55.0% | |
| TGCTCTGCGCATGAAAGAGC+AGG | + | Chr1:10788449-10788468 | MsG0180000763.01.T01:CDS | 55.0% | |
| CTTGCCTGAGAAGGTCGGTG+AGG | - | Chr1:10788485-10788504 | None:intergenic | 60.0% | |
| GCTGTAGGTCTCAGCATGCC+TGG | + | Chr1:10787769-10787788 | MsG0180000763.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 10787449 | 10789824 | 10787449 | ID=MsG0180000763.01;Name=MsG0180000763.01 |
| Chr1 | mRNA | 10787449 | 10789824 | 10787449 | ID=MsG0180000763.01.T01;Parent=MsG0180000763.01;Name=MsG0180000763.01.T01;_AED=0.35;_eAED=0.38;_QI=0|0|0.5|1|1|1|2|238|452 |
| Chr1 | exon | 10788309 | 10789824 | 10788309 | ID=MsG0180000763.01.T01:exon:1092;Parent=MsG0180000763.01.T01 |
| Chr1 | exon | 10787449 | 10787529 | 10787449 | ID=MsG0180000763.01.T01:exon:1091;Parent=MsG0180000763.01.T01 |
| Chr1 | CDS | 10787449 | 10787529 | 10787449 | ID=MsG0180000763.01.T01:cds;Parent=MsG0180000763.01.T01 |
| Chr1 | CDS | 10788309 | 10789586 | 10788309 | ID=MsG0180000763.01.T01:cds;Parent=MsG0180000763.01.T01 |
| Chr1 | three_prime_UTR | 10789587 | 10789824 | 10789587 | ID=MsG0180000763.01.T01:three_prime_utr;Parent=MsG0180000763.01.T01 |
| Gene Sequence |
| Protein sequence |
