AlfalfaGEDB | MsG0580025973.01

M. sativa cultivar ZhongmuNo.1 / MsG0580025973.01

KEGG: K00799
GO: GO:0005515
PFAM: PF02798

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025973.01.T01	PNX72366.1	88.073	109	11	1	211	319	1	107	7.66E-58	192

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025973.01.T01	Q9FUS8	60.177	113	43	1	211	323	1	111	1.28E-39	142

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025973.01.T01	A0A2K3L1I6	88.073	109	11	1	211	319	1	107	3.66e-58	192

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048357.01	MsG0580025973.01	0.828448	8.939611e-55	8.888678e-52
MsG0180000404.01	MsG0580025973.01	0.825354	4.907084e-54	4.461953e-51
MsG0180003741.01	MsG0580025973.01	0.852750	3.759932e-61	7.936119e-58
MsG0380011496.01	MsG0580025973.01	0.813706	2.235191e-51	1.470332e-48
MsG0380011675.01	MsG0580025973.01	0.802311	5.958878e-49	2.909712e-46
MsG0480019279.01	MsG0580025973.01	0.819846	9.369910e-53	7.293181e-50
MsG0480020096.01	MsG0580025973.01	0.806903	6.561053e-50	3.603920e-47
MsG0480024022.01	MsG0580025973.01	0.827723	1.336536e-54	1.301050e-51
MsG0580024966.01	MsG0580025973.01	0.818374	2.026742e-52	1.514540e-49
MsG0580025466.01	MsG0580025973.01	0.805743	1.151876e-49	6.142404e-47
MsG0580025973.01	MsG0580025974.01	0.842802	2.070252e-58	3.174577e-55
MsG0580025973.01	MsG0580026000.01	0.808987	2.363799e-50	1.371202e-47
MsG0580025973.01	MsG0580027925.01	0.813690	2.253325e-51	1.481603e-48
MsG0580025973.01	MsG0580029310.01	0.831769	1.383811e-55	1.516710e-52
MsG0580025973.01	MsG0680031959.01	0.828043	1.119563e-54	1.100129e-51
MsG0580025973.01	MsG0780040286.01	0.801453	8.940740e-49	4.271404e-46
MsG0580025973.01	MsG0780040846.01	0.808137	3.589521e-50	2.036265e-47
MsG0580025973.01	MsG0780041259.01	0.848340	6.523720e-60	1.193421e-56
MsG0580025973.01	MsG0780041698.01	0.820728	5.883230e-53	4.692577e-50
MsG0580025973.01	MsG0880045585.01	0.805414	1.350203e-49	7.138949e-47
MsG0380016465.01	MsG0580025973.01	0.810499	1.118322e-50	6.751907e-48
MsG0280008390.01	MsG0580025973.01	0.804670	1.932011e-49	1.002141e-46
MsG0280008391.01	MsG0580025973.01	0.816473	5.431551e-52	3.852251e-49
MsG0280008395.01	MsG0580025973.01	0.802451	5.574796e-49	2.731737e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025973.01.T01	MTR_5g037380	83.784	111	17	1	211	321	1	110	3.52e-60	192
MsG0580025973.01.T01	MTR_8g061950	64.602	113	35	2	211	321	1	110	1.81e-41	144
MsG0580025973.01.T01	MTR_7g065640	54.783	115	46	2	211	323	1	111	1.05e-35	128
MsG0580025973.01.T01	MTR_7g065720	56.522	115	44	2	211	323	1	111	1.12e-35	129
MsG0580025973.01.T01	MTR_7g065660	53.571	112	46	2	211	320	1	108	7.29e-34	124
MsG0580025973.01.T01	MTR_7g065740	55.357	112	44	2	211	320	1	108	1.72e-33	123
MsG0580025973.01.T01	MTR_1g090100	59.048	105	39	1	216	320	3	103	4.34e-33	122
MsG0580025973.01.T01	MTR_3g099757	52.632	114	50	1	211	324	1	110	5.52e-33	122
MsG0580025973.01.T01	MTR_1g090060	56.731	104	41	1	215	318	3	102	7.08e-32	119
MsG0580025973.01.T01	MTR_7g065260	53.571	112	46	2	210	319	7	114	1.36e-31	118
MsG0580025973.01.T01	MTR_7g065750	50.893	112	49	2	211	320	1	108	6.10e-31	116
MsG0580025973.01.T01	MTR_2g070110	52.679	112	50	1	213	324	2	110	9.98e-31	115
MsG0580025973.01.T01	MTR_1g090090	55.660	106	43	1	215	320	3	104	1.07e-30	115
MsG0580025973.01.T01	MTR_1g115195	54.717	106	44	1	215	320	3	104	1.34e-30	115
MsG0580025973.01.T01	MTR_7g065600	50.435	115	51	2	211	323	1	111	1.34e-30	115
MsG0580025973.01.T01	MTR_2g070070	53.211	109	48	1	213	321	2	107	3.38e-30	114
MsG0580025973.01.T01	MTR_1g090070	53.846	104	44	1	215	318	9	108	3.47e-30	114
MsG0580025973.01.T01	MTR_7g065230	51.351	111	48	2	211	319	1	107	5.41e-30	114
MsG0580025973.01.T01	MTR_7g065710	47.788	113	54	2	211	323	1	108	1.07e-29	113
MsG0580025973.01.T01	MTR_7g065590	51.351	111	48	2	211	319	1	107	1.09e-29	113
MsG0580025973.01.T01	MTR_4g019790	47.273	110	54	1	214	323	6	111	1.15e-29	113
MsG0580025973.01.T01	MTR_8g087425	49.558	113	53	1	211	323	1	109	3.43e-29	112
MsG0580025973.01.T01	MTR_2g070180	56.731	104	42	2	218	321	7	107	3.75e-29	111
MsG0580025973.01.T01	MTR_7g065630	46.087	115	58	1	209	323	19	129	4.36e-29	112
MsG0580025973.01.T01	MTR_2g070150	52.294	109	49	1	213	321	2	107	1.04e-28	110
MsG0580025973.01.T01	MTR_7g065700	49.524	105	49	1	215	319	7	107	1.20e-28	110
MsG0580025973.01.T01	MTR_2g070200	52.252	111	50	1	213	323	2	109	1.56e-28	110
MsG0580025973.01.T01	MTR_5g037390	73.333	75	19	1	239	313	11	84	4.18e-28	105
MsG0580025973.01.T01	MTR_4g059730	51.887	106	47	1	213	318	2	103	5.84e-28	108
MsG0580025973.01.T01	MTR_2g070060	51.376	109	50	1	213	321	2	107	8.01e-28	108
MsG0580025973.01.T01	MTR_7g065265	50.450	111	49	2	211	319	1	107	8.84e-28	108
MsG0580025973.01.T01	MTR_2g070120	56.122	98	40	1	224	321	13	107	9.07e-28	108
MsG0580025973.01.T01	MTR_7g065290	51.351	111	48	2	211	319	1	107	9.80e-28	108
MsG0580025973.01.T01	MTR_7g065680	45.872	109	55	1	215	323	7	111	1.05e-27	108
MsG0580025973.01.T01	MTR_6g080440	49.091	110	52	1	214	323	2	107	1.08e-27	108
MsG0580025973.01.T01	MTR_7g065270	50.450	111	49	2	211	319	1	107	1.28e-27	107
MsG0580025973.01.T01	MTR_4g124130	52.778	108	47	2	214	320	3	107	7.66e-27	105
MsG0580025973.01.T01	MTR_4g019780	47.368	114	56	1	210	323	3	112	8.49e-27	105
MsG0580025973.01.T01	MTR_2g070130	54.082	98	42	1	224	321	13	107	1.42e-26	105
MsG0580025973.01.T01	MTR_2g070140	55.319	94	39	1	228	321	1	91	2.63e-26	103
MsG0580025973.01.T01	MTR_5g040430	45.370	108	56	1	213	320	5	109	3.34e-26	103
MsG0580025973.01.T01	MTR_8g087410	47.788	113	55	1	211	323	2	110	3.90e-26	103
MsG0580025973.01.T01	MTR_2g070210	56.000	100	39	2	224	321	13	109	2.51e-25	101
MsG0580025973.01.T01	MTR_3g467420	51.818	110	50	1	212	321	6	112	3.31e-25	101
MsG0580025973.01.T01	MTR_0186s0030	50.000	108	51	1	213	320	2	106	3.73e-25	99.0
MsG0580025973.01.T01	MTR_8g056940	49.074	108	52	1	213	320	2	106	3.47e-24	98.6
MsG0580025973.01.T01	MTR_1g090150	46.667	105	52	1	215	319	3	103	3.77e-24	98.6
MsG0580025973.01.T01	MTR_3g467430	53.061	98	43	1	224	321	18	112	5.73e-24	98.2
MsG0580025973.01.T01	MTR_5g076900	51.515	99	43	2	224	321	15	109	1.90e-23	96.7
MsG0580025973.01.T01	MTR_2g072120	57.143	63	24	1	259	321	2	61	9.87e-20	82.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025973.01.T01	AT1G10370	60.177	113	43	1	211	323	1	111	1.31e-40	142
MsG0580025973.01.T01	AT1G10360	58.407	113	45	1	211	323	1	111	3.55e-40	140
MsG0580025973.01.T01	AT1G27140	53.846	117	47	3	211	323	1	114	4.62e-33	122
MsG0580025973.01.T01	AT1G59670	53.774	106	46	2	215	319	6	109	1.37e-32	121
MsG0580025973.01.T01	AT1G27130	50.862	116	51	3	211	323	1	113	2.74e-31	117
MsG0580025973.01.T01	AT1G59700	51.818	110	50	2	215	323	6	113	4.10e-31	117
MsG0580025973.01.T01	AT1G69920	45.763	118	55	3	210	321	25	139	1.39e-28	111
MsG0580025973.01.T01	AT3G09270	48.624	109	52	2	216	323	7	112	2.25e-28	110
MsG0580025973.01.T01	AT2G29420	45.045	111	57	1	213	323	7	113	3.16e-28	109
MsG0580025973.01.T01	AT2G29490	48.113	106	51	1	216	321	8	109	4.56e-28	108
MsG0580025973.01.T01	AT1G78340	53.061	98	43	1	224	321	13	107	1.22e-27	107
MsG0580025973.01.T01	AT2G29480	46.226	106	53	1	216	321	8	109	1.48e-27	107
MsG0580025973.01.T01	AT2G29460	47.664	107	52	1	214	320	6	108	2.81e-27	107
MsG0580025973.01.T01	AT1G69930	48.696	115	54	2	209	321	4	115	1.56e-26	105
MsG0580025973.01.T01	AT2G29470	48.113	106	50	2	216	320	8	109	1.60e-25	102
MsG0580025973.01.T01	AT1G74590	48.077	104	51	1	218	321	10	110	5.14e-25	101
MsG0580025973.01.T01	AT2G29450	44.860	107	55	1	215	321	6	108	7.66e-25	100
MsG0580025973.01.T01	AT1G17170	53.608	97	42	1	224	320	13	106	2.72e-24	99.0
MsG0580025973.01.T01	AT3G43800	50.877	114	54	2	211	323	1	113	7.55e-24	97.8
MsG0580025973.01.T01	AT1G78320	49.524	105	50	1	218	322	7	108	1.34e-23	97.1
MsG0580025973.01.T01	AT1G78380	47.748	111	55	1	213	323	2	109	1.61e-23	96.7
MsG0580025973.01.T01	AT2G29440	44.144	111	57	2	211	320	1	107	2.94e-23	96.3
MsG0580025973.01.T01	AT1G78370	45.833	96	49	1	224	319	13	105	9.28e-23	94.7
MsG0580025973.01.T01	AT1G53680	47.423	97	48	1	224	320	16	109	1.56e-22	94.4
MsG0580025973.01.T01	AT1G17190	45.946	111	57	1	211	321	1	108	2.76e-22	93.6
MsG0580025973.01.T01	AT1G78360	49.057	106	50	2	218	322	7	109	9.97e-22	92.0
MsG0580025973.01.T01	AT1G17180	48.980	98	47	1	224	321	13	107	1.37e-21	91.7
MsG0580025973.01.T01	AT5G62480	43.689	103	55	1	214	316	7	106	2.81e-21	91.3

Find 56 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCGAGCCATTGCGAAATTT+TGG	0.144442	5:+28410520	MsG0580025973.01.T01:CDS
ACAATTCATAATGAATTCTA+AGG	0.205659	5:+28407461	None:intergenic
CTGAAGAAGCAAGTCACTTT+TGG	0.216096	5:-28410355	None:intergenic
CGATCCTATTATTTCTGATA+TGG	0.221766	5:+28407545	MsG0580025973.01.T01:CDS
TTGAATATATTGATGAAGTT+TGG	0.240973	5:+28410451	MsG0580025973.01.T01:CDS
TACAAATGACTTGAAGCTTT+TGG	0.262387	5:+28410242	MsG0580025973.01.T01:CDS
TAGAAGAAATTGACGCATTT+CGG	0.280833	5:-28408017	None:intergenic
AAAATTCCAGTTCTCATTCA+TGG	0.281479	5:+28410396	MsG0580025973.01.T01:CDS
CAAGATTCAATTCTTGAATC+TGG	0.293017	5:+28407807	MsG0580025973.01.T01:CDS
AATCCAATCCTTTGATGTTA+AGG	0.308526	5:-28410305	None:intergenic
GGCCATTCTCCATAGCTTCT+TGG	0.310571	5:-28407728	None:intergenic
GTCATTTGTAGCCATTGTTA+AGG	0.331101	5:-28410229	None:intergenic
TCTTGCTGCTTTGAGAAGTT+AGG	0.355967	5:-28407789	None:intergenic
GATACCATATCAGAAATAAT+AGG	0.360182	5:-28407549	None:intergenic
ATCCAATCCTTTGATGTTAA+GGG	0.362609	5:-28410304	None:intergenic
GACCGTGATGATGAAGTTCT+AGG	0.385759	5:+28407657	MsG0580025973.01.T01:CDS
TGATCATGAAGATCAAGATT+TGG	0.391847	5:+28407602	MsG0580025973.01.T01:CDS
TGCCCTTAACATCAAAGGAT+TGG	0.392813	5:+28410302	MsG0580025973.01.T01:CDS
CGAGTTTGAGAAGTTGGTTT+CGG	0.398720	5:+28407977	MsG0580025973.01.T01:CDS
AATTCTTGAATCTGGAATCA+TGG	0.410069	5:+28407815	MsG0580025973.01.T01:CDS
TAGTTGTAGATTAGCTTCAT+AGG	0.416615	5:-28407520	None:intergenic
TCATTTGTAGCCATTGTTAA+GGG	0.424630	5:-28410228	None:intergenic
TTCCAACTCCAAGTTTGATT+CGG	0.425714	5:+28407943	MsG0580025973.01.T01:CDS
ATAGGAGAAGTATGATTGAT+AGG	0.428121	5:-28407502	None:intergenic
GACGCATTTCGGCGGAGTTG+TGG	0.437492	5:-28408006	None:intergenic
ACTCTTCGAGTTTGAGAAGT+TGG	0.438987	5:+28407971	MsG0580025973.01.T01:CDS
CTTGCTGCTTTGAGAAGTTA+GGG	0.442717	5:-28407788	None:intergenic
TTATCTCCATGAATGAGAAC+TGG	0.442961	5:-28410402	None:intergenic
AGTGAAAACCGAATCAAACT+TGG	0.486092	5:-28407951	None:intergenic
TATGATTGCAGATTCACAAA+TGG	0.490176	5:-28410427	None:intergenic
AACCGAATCAAACTTGGAGT+TGG	0.508017	5:-28407945	None:intergenic
AAATACCTTGTCATCAATGT+AGG	0.511240	5:-28410547	None:intergenic
AAAATTGCCCTTAACATCAA+AGG	0.511770	5:+28410297	MsG0580025973.01.T01:CDS
TTCTCCATAGCTTCTTGGAA+TGG	0.515697	5:-28407723	None:intergenic
GCTCGATCATAAGCATTTGA+AGG	0.528885	5:-28410504	None:intergenic
TGATTGATAGGAAGAAACAT+AGG	0.536326	5:-28407490	None:intergenic
TTCCAAGAAGCTATGGAGAA+TGG	0.537911	5:+28407726	MsG0580025973.01.T01:CDS
CAATTCATAATGAATTCTAA+GGG	0.549764	5:+28407462	None:intergenic
ATCACCATTCCAAGAAGCTA+TGG	0.560870	5:+28407719	MsG0580025973.01.T01:CDS
CACTATAGATTGATGCGCAA+CGG	0.567133	5:-28407581	None:intergenic
CATAAGCATTTGAAGGAAGG+AGG	0.571469	5:-28410497	None:intergenic
AAGAAATTGACGCATTTCGG+CGG	0.572341	5:-28408014	None:intergenic
GATCATAAGCATTTGAAGGA+AGG	0.577764	5:-28410500	None:intergenic
CTTAATACAAATGGACTGAA+CGG	0.585122	5:-28410270	None:intergenic
CACATCAAAGTATTCGATCC+CGG	0.589651	5:+28408056	MsG0580025973.01.T01:CDS
ACTAGAATTTCCCTTAACAA+TGG	0.591456	5:+28410218	MsG0580025973.01.T01:CDS
GATTGATAGGAAGAAACATA+GGG	0.592292	5:-28407489	None:intergenic
GGTTGCCTACATTGATGACA+AGG	0.605042	5:+28410542	MsG0580025973.01.T01:CDS
CGAACTGTTCACAGTGACAT+CGG	0.611124	5:-28407874	None:intergenic
GTGACATCGGAAAACAATTG+AGG	0.611142	5:-28407861	None:intergenic
CGCCTAGAACTTCATCATCA+CGG	0.613204	5:-28407659	None:intergenic
CGGGATCGAATACTTTGATG+TGG	0.626424	5:-28408055	None:intergenic
TCTTCATCATCTGCGAAACA+CGG	0.628769	5:-28407749	None:intergenic
GGCAACCCAAAATTTCGCAA+TGG	0.635242	5:-28410526	None:intergenic
AGTTGGAAACAAGAACGCAG+TGG	0.728260	5:-28407928	None:intergenic
ATCAAAGTATTCGATCCCGG+TGG	0.756174	5:+28408059	MsG0580025973.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTTACTCTTAATACAAA+TGG	-	Chr5:28410282-28410301	None:intergenic	15.0%
!!	ACAATTCATAATGAATTCTA+AGG	+	Chr5:28409199-28409218	MsG0580025973.01.T01:intron	20.0%
!!	ATATCTAATATGTACCTATA+CGG	+	Chr5:28409954-28409973	MsG0580025973.01.T01:intron	20.0%
!!	ATGTCATTATCAGAAATAAT+AGG	-	Chr5:28409290-28409309	None:intergenic	20.0%
!!	CAATTCATAATGAATTCTAA+GGG	+	Chr5:28409200-28409219	MsG0580025973.01.T01:intron	20.0%
!!	TTCTTTCATCTATAATTCAA+GGG	+	Chr5:28409471-28409490	MsG0580025973.01.T01:intron	20.0%
!!	TTGAATATATTGATGAAGTT+TGG	+	Chr5:28410451-28410470	MsG0580025973.01.T01:CDS	20.0%
!!!	ATTGCAAATTAATTCTGAAA+AGG	-	Chr5:28408567-28408586	None:intergenic	20.0%
!	AATGTTGTAACTAAAACCAA+GGG	-	Chr5:28408981-28409000	None:intergenic	25.0%
!	AGTTACAACATTATTCACTT+TGG	+	Chr5:28408989-28409008	MsG0580025973.01.T01:intron	25.0%
!	ATAGTTAGTTACAAGTAGTT+AGG	+	Chr5:28409129-28409148	MsG0580025973.01.T01:intron	25.0%
!	ATTATGGCACACAATAAATT+AGG	-	Chr5:28410092-28410111	None:intergenic	25.0%
!	CATATAAAATTACATCACCA+AGG	+	Chr5:28409446-28409465	MsG0580025973.01.T01:intron	25.0%
!	CTTCTTTCATCTATAATTCA+AGG	+	Chr5:28409470-28409489	MsG0580025973.01.T01:intron	25.0%
!	GATACCATATCAGAAATAAT+AGG	-	Chr5:28407552-28407571	None:intergenic	25.0%
!	GATGAAGTTTGGAAAAATAA+TGG	+	Chr5:28410462-28410481	MsG0580025973.01.T01:CDS	25.0%
!	GTTACAACATTATTCACTTT+GGG	+	Chr5:28408990-28409009	MsG0580025973.01.T01:intron	25.0%
!	TAATGTTGTAACTAAAACCA+AGG	-	Chr5:28408982-28409001	None:intergenic	25.0%
!	TTAGTAAAGGTAGTTAGAAT+TGG	+	Chr5:28409083-28409102	MsG0580025973.01.T01:intron	25.0%
!	TTGGAAATTAAATGACATAG+AGG	-	Chr5:28409877-28409896	None:intergenic	25.0%
!!	GTAATTTTATATGCTCGTAA+GGG	-	Chr5:28409439-28409458	None:intergenic	25.0%
!!	TGTAATTTTATATGCTCGTA+AGG	-	Chr5:28409440-28409459	None:intergenic	25.0%
!!!	AAGTTATCGACTCATTTAAA+TGG	-	Chr5:28409400-28409419	None:intergenic	25.0%
!!!	AGATTTTTCAACATGTAGTT+CGG	-	Chr5:28409800-28409819	None:intergenic	25.0%
!!!	GACATTTAATTTTGTGAAGT+TGG	-	Chr5:28409896-28409915	None:intergenic	25.0%
!!!	TATTTTGGAAAAGTTGTTCT+TGG	+	Chr5:28408714-28408733	MsG0580025973.01.T01:intron	25.0%
	AAAATTCCAGTTCTCATTCA+TGG	+	Chr5:28410396-28410415	MsG0580025973.01.T01:CDS	30.0%
	AAAATTGCCCTTAACATCAA+AGG	+	Chr5:28410297-28410316	MsG0580025973.01.T01:CDS	30.0%
	AAAGTGTGTTTACATCAAGT+TGG	+	Chr5:28408741-28408760	MsG0580025973.01.T01:intron	30.0%
	AAATACCTTGTCATCAATGT+AGG	-	Chr5:28410550-28410569	None:intergenic	30.0%
	AATATTGAAAGCAAGCATGA+AGG	-	Chr5:28410049-28410068	None:intergenic	30.0%
	AATCCAATCCTTTGATGTTA+AGG	-	Chr5:28410308-28410327	None:intergenic	30.0%
	ACTAGAATTTCCCTTAACAA+TGG	+	Chr5:28410218-28410237	MsG0580025973.01.T01:CDS	30.0%
	AGATTACATGAATGAGTACA+TGG	-	Chr5:28409171-28409190	None:intergenic	30.0%
	ATATTGAAAGCAAGCATGAA+GGG	-	Chr5:28410048-28410067	None:intergenic	30.0%
	ATCCAATCCTTTGATGTTAA+GGG	-	Chr5:28410307-28410326	None:intergenic	30.0%
	ATGTTGTAACTAAAACCAAG+GGG	-	Chr5:28408980-28408999	None:intergenic	30.0%
	ATTGAATTGACAATACAGTC+TGG	+	Chr5:28410066-28410085	MsG0580025973.01.T01:intron	30.0%
	CAAGATTCAATTCTTGAATC+TGG	+	Chr5:28407807-28407826	MsG0580025973.01.T01:CDS	30.0%
	CAAGTAGTTAGGTCTATAAA+AGG	+	Chr5:28409140-28409159	MsG0580025973.01.T01:intron	30.0%
	GAGATAACTAGAGTTAGTAA+AGG	+	Chr5:28409070-28409089	MsG0580025973.01.T01:intron	30.0%
	GATTGATAGGAAGAAACATA+GGG	-	Chr5:28407492-28407511	None:intergenic	30.0%
	TACATGCAAAAGTTACTTGA+AGG	+	Chr5:28410190-28410209	MsG0580025973.01.T01:intron	30.0%
	TAGAAGAAATTGACGCATTT+CGG	-	Chr5:28408020-28408039	None:intergenic	30.0%
	TAGATGTAGATTAGCATCAT+AGG	-	Chr5:28409261-28409280	None:intergenic	30.0%
	TATGATTGCAGATTCACAAA+TGG	-	Chr5:28410430-28410449	None:intergenic	30.0%
	TCATAGGTATGTAGTCATTA+TGG	+	Chr5:28410006-28410025	MsG0580025973.01.T01:intron	30.0%
	TCATTTGTAGCCATTGTTAA+GGG	-	Chr5:28410231-28410250	None:intergenic	30.0%
	TCCATAAGTGATCTAAGAAA+AGG	+	Chr5:28409764-28409783	MsG0580025973.01.T01:intron	30.0%
	TGATCATGAAGATCAAGATT+TGG	+	Chr5:28407602-28407621	MsG0580025973.01.T01:CDS	30.0%
	TGATTGATAGGAAGAAACAT+AGG	-	Chr5:28407493-28407512	None:intergenic	30.0%
	TGTAGTCAAAAGAGGTAAAA+AGG	+	Chr5:28409726-28409745	MsG0580025973.01.T01:intron	30.0%
	TTATAGATGAAAGAAGTCCT+TGG	-	Chr5:28409466-28409485	None:intergenic	30.0%
!	AATTCTTGAATCTGGAATCA+TGG	+	Chr5:28407815-28407834	MsG0580025973.01.T01:CDS	30.0%
!	ACAAATGACTTGAAGCTTTT+GGG	+	Chr5:28410243-28410262	MsG0580025973.01.T01:CDS	30.0%
!	ATAGGAGAAGTATGATTGAT+AGG	-	Chr5:28407505-28407524	None:intergenic	30.0%
!	TAACTTTTGCATGTATTGAG+TGG	-	Chr5:28410185-28410204	None:intergenic	30.0%
!	TACAAATGACTTGAAGCTTT+TGG	+	Chr5:28410242-28410261	MsG0580025973.01.T01:CDS	30.0%
!!	CGATCCTATTATTTCTGATA+TGG	+	Chr5:28407545-28407564	MsG0580025973.01.T01:CDS	30.0%
!!	CTTAATACAAATGGACTGAA+CGG	-	Chr5:28410273-28410292	None:intergenic	30.0%
!!	GTGTTTGCAGATTCTTATTT+TGG	+	Chr5:28408699-28408718	MsG0580025973.01.T01:intron	30.0%
!!	TAGTTGTAGATTAGCTTCAT+AGG	-	Chr5:28407523-28407542	None:intergenic	30.0%
!!	TTTTGTGTGTTTCTGTGTTT+GGG	+	Chr5:28408531-28408550	MsG0580025973.01.T01:intron	30.0%
!!!	ACTGGAATTTTTTTGTACAC+AGG	-	Chr5:28410387-28410406	None:intergenic	30.0%
	AAAGCTATTCAAGCTGTGTT+TGG	+	Chr5:28408495-28408514	MsG0580025973.01.T01:intron	35.0%
	AAGCTATTCAAGCTGTGTTT+GGG	+	Chr5:28408496-28408515	MsG0580025973.01.T01:intron	35.0%
	ACAGAAAGAGCTAATGAAAG+AGG	-	Chr5:28408938-28408957	None:intergenic	35.0%
	AGTGAAAACCGAATCAAACT+TGG	-	Chr5:28407954-28407973	None:intergenic	35.0%
	ATCTTACAATCAAGTGAGAG+AGG	-	Chr5:28409537-28409556	None:intergenic	35.0%
	ATTCTCTTACCTTGAGTTTG+AGG	+	Chr5:28409038-28409057	MsG0580025973.01.T01:intron	35.0%
	CCAAGTACCAACAACTATTA+TGG	-	Chr5:28410108-28410127	None:intergenic	35.0%
	CCATAATAGTTGTTGGTACT+TGG	+	Chr5:28410105-28410124	MsG0580025973.01.T01:intron	35.0%
	GAAGAATGATATGCATAAGC+TGG	+	Chr5:28408763-28408782	MsG0580025973.01.T01:intron	35.0%
	GATCATAAGCATTTGAAGGA+AGG	-	Chr5:28410503-28410522	None:intergenic	35.0%
	GATTGATAGGAGGAAACATA+GGG	-	Chr5:28409230-28409249	None:intergenic	35.0%
	GGTATGTAGTCATTATGGTA+TGG	+	Chr5:28410011-28410030	MsG0580025973.01.T01:intron	35.0%
	GTCATTTGTAGCCATTGTTA+AGG	-	Chr5:28410232-28410251	None:intergenic	35.0%
	GTCGACAGAAAAAAGAAGAT+CGG	-	Chr5:28408256-28408275	None:intergenic	35.0%
	TACATGAATGAGTACATGGT+TGG	-	Chr5:28409167-28409186	None:intergenic	35.0%
	TATTGAAAGCAAGCATGAAG+GGG	-	Chr5:28410047-28410066	None:intergenic	35.0%
	TCTGCATTTGTATTTGATCC+TGG	+	Chr5:28408215-28408234	MsG0580025973.01.T01:intron	35.0%
	TGAATCGCAAAAATTACCAC+CGG	-	Chr5:28408078-28408097	None:intergenic	35.0%
	TGATTGATAGGAGGAAACAT+AGG	-	Chr5:28409231-28409250	None:intergenic	35.0%
	TGTTGTAACTAAAACCAAGG+GGG	-	Chr5:28408979-28408998	None:intergenic	35.0%
	TTATCTCCATGAATGAGAAC+TGG	-	Chr5:28410405-28410424	None:intergenic	35.0%
	TTCCAACTCCAAGTTTGATT+CGG	+	Chr5:28407943-28407962	MsG0580025973.01.T01:CDS	35.0%
	TTCTCTTACCTTGAGTTTGA+GGG	+	Chr5:28409039-28409058	MsG0580025973.01.T01:intron	35.0%
	TTGAAAGAATGATAGCTCAG+AGG	-	Chr5:28408324-28408343	None:intergenic	35.0%
	TTGATTCTGGTGTTTGATTC+TGG	-	Chr5:28408408-28408427	None:intergenic	35.0%
	TTGTGTGCCATAATAGTTGT+TGG	+	Chr5:28410098-28410117	MsG0580025973.01.T01:intron	35.0%
!	ACGGATACTTCTCCAATTTT+AGG	+	Chr5:28409973-28409992	MsG0580025973.01.T01:intron	35.0%
!	CGGATACTTCTCCAATTTTA+GGG	+	Chr5:28409974-28409993	MsG0580025973.01.T01:intron	35.0%
!	GCCTTTTCTTAGATCACTTA+TGG	-	Chr5:28409768-28409787	None:intergenic	35.0%
!	TATTTTGTCTTTGATCCTGG+AGG	+	Chr5:28408351-28408370	MsG0580025973.01.T01:intron	35.0%
!	TCGTATTTTGTCTTTGATCC+TGG	+	Chr5:28408348-28408367	MsG0580025973.01.T01:intron	35.0%
!!	AATTGGAGAAGTATCCGTAT+AGG	-	Chr5:28409971-28409990	None:intergenic	35.0%
!!	CACAGAAAAAGTGCGTTTTT+GGG	+	Chr5:28408472-28408491	MsG0580025973.01.T01:intron	35.0%
!!	GTTTTGTGTGTTTCTGTGTT+TGG	+	Chr5:28408530-28408549	MsG0580025973.01.T01:intron	35.0%
!!!	TCTCCAATTTTAGGGTAAGA+TGG	+	Chr5:28409982-28410001	MsG0580025973.01.T01:intron	35.0%
!!!	TGAAGAAGCAAGTCACTTTT+GGG	-	Chr5:28410357-28410376	None:intergenic	35.0%
	AAAAATCTCACAGCACAGTG+GGG	+	Chr5:28409812-28409831	MsG0580025973.01.T01:intron	40.0%
	AACCGAATCAAACTTGGAGT+TGG	-	Chr5:28407948-28407967	None:intergenic	40.0%
	AAGAAATTGACGCATTTCGG+CGG	-	Chr5:28408017-28408036	None:intergenic	40.0%
	AAGCAAACTGAACTTGACAG+AGG	-	Chr5:28408110-28408129	None:intergenic	40.0%
	AATATGCAGCGGCAATATTC+TGG	-	Chr5:28409918-28409937	None:intergenic	40.0%
	ATCACCATTCCAAGAAGCTA+TGG	+	Chr5:28407719-28407738	MsG0580025973.01.T01:CDS	40.0%
	CAATGCTCTATCTAGAAACG+TGG	-	Chr5:28408644-28408663	None:intergenic	40.0%
	CACTATAGATTGATGCGCAA+CGG	-	Chr5:28407584-28407603	None:intergenic	40.0%
	CATAAGCATTTGAAGGAAGG+AGG	-	Chr5:28410500-28410519	None:intergenic	40.0%
	CCAGAATCAATGAAAGTGAG+TGG	+	Chr5:28408418-28408437	MsG0580025973.01.T01:intron	40.0%
	CTCTGTCTATGAATATGCAG+CGG	-	Chr5:28409929-28409948	None:intergenic	40.0%
	GAAAAATCTCACAGCACAGT+GGG	+	Chr5:28409811-28409830	MsG0580025973.01.T01:intron	40.0%
	GAATCGCAAAAATTACCACC+GGG	-	Chr5:28408077-28408096	None:intergenic	40.0%
	GACTAGTGTGTAGTCAAAAG+AGG	+	Chr5:28409718-28409737	MsG0580025973.01.T01:intron	40.0%
	GAGACAACAGATCTATGGTA+TGG	-	Chr5:28410146-28410165	None:intergenic	40.0%
	GAGCCATCTTACCCTAAAAT+TGG	-	Chr5:28409988-28410007	None:intergenic	40.0%
	GCATTTGTATTTGATCCTGG+TGG	+	Chr5:28408218-28408237	MsG0580025973.01.T01:intron	40.0%
	GCTCGATCATAAGCATTTGA+AGG	-	Chr5:28410507-28410526	None:intergenic	40.0%
	GTGACATCGGAAAACAATTG+AGG	-	Chr5:28407864-28407883	None:intergenic	40.0%
	TCTCTTACCTTGAGTTTGAG+GGG	+	Chr5:28409040-28409059	MsG0580025973.01.T01:intron	40.0%
	TCTTCATCATCTGCGAAACA+CGG	-	Chr5:28407752-28407771	None:intergenic	40.0%
	TGAAAAATCTCACAGCACAG+TGG	+	Chr5:28409810-28409829	MsG0580025973.01.T01:intron	40.0%
	TGAGAGAGACAACAGATCTA+TGG	-	Chr5:28410151-28410170	None:intergenic	40.0%
	TGCCCTTAACATCAAAGGAT+TGG	+	Chr5:28410302-28410321	MsG0580025973.01.T01:CDS	40.0%
	TTCCAAGAAGCTATGGAGAA+TGG	+	Chr5:28407726-28407745	MsG0580025973.01.T01:CDS	40.0%
	TTCTCCATAGCTTCTTGGAA+TGG	-	Chr5:28407726-28407745	None:intergenic	40.0%
!	ACTCTTCGAGTTTGAGAAGT+TGG	+	Chr5:28407971-28407990	MsG0580025973.01.T01:CDS	40.0%
!	ATCGAGCCATTGCGAAATTT+TGG	+	Chr5:28410520-28410539	MsG0580025973.01.T01:CDS	40.0%
!	ATTTTCGTGCTCGATTCCAA+TGG	+	Chr5:28408149-28408168	MsG0580025973.01.T01:intron	40.0%
!	CACATCAAAGTATTCGATCC+CGG	+	Chr5:28408056-28408075	MsG0580025973.01.T01:CDS	40.0%
!	CGAGTTTGAGAAGTTGGTTT+CGG	+	Chr5:28407977-28407996	MsG0580025973.01.T01:CDS	40.0%
!	CTGGATTTTGCATTGGGATT+GGG	+	Chr5:28408907-28408926	MsG0580025973.01.T01:intron	40.0%
!	GAAGACCTGGATTTTGCATT+GGG	+	Chr5:28408901-28408920	MsG0580025973.01.T01:intron	40.0%
!	GGAGAAGTATGATTGATAGG+AGG	-	Chr5:28407502-28407521	None:intergenic	40.0%
!	TCGAGCCATTGCGAAATTTT+GGG	+	Chr5:28410521-28410540	MsG0580025973.01.T01:CDS	40.0%
!	TGAAGACCTGGATTTTGCAT+TGG	+	Chr5:28408900-28408919	MsG0580025973.01.T01:intron	40.0%
!	TGTATAAGCTGGTTCACATG+AGG	+	Chr5:28408838-28408857	MsG0580025973.01.T01:intron	40.0%
!	TTTAGGGTAAGATGGCTCAT+AGG	+	Chr5:28409990-28410009	MsG0580025973.01.T01:intron	40.0%
!!	CAAGGGTATTCAAAGAAGCA+AGG	+	Chr5:28409488-28409507	MsG0580025973.01.T01:intron	40.0%
!!	CCACAGAAAAAGTGCGTTTT+TGG	+	Chr5:28408471-28408490	MsG0580025973.01.T01:intron	40.0%
!!	CCACTCACTTTCATTGATTC+TGG	-	Chr5:28408421-28408440	None:intergenic	40.0%
!!	CTGAAGAAGCAAGTCACTTT+TGG	-	Chr5:28410358-28410377	None:intergenic	40.0%
!!	CTTGCTGCTTTGAGAAGTTA+GGG	-	Chr5:28407791-28407810	None:intergenic	40.0%
!!	TCTTGCTGCTTTGAGAAGTT+AGG	-	Chr5:28407792-28407811	None:intergenic	40.0%
!!!	CAAGTCACTTTTGGGATTCA+TGG	-	Chr5:28410349-28410368	None:intergenic	40.0%
!!!	CCAAAAACGCACTTTTTCTG+TGG	-	Chr5:28408474-28408493	None:intergenic	40.0%
	AACTGAACTTGACAGAGGTG+AGG	-	Chr5:28408105-28408124	None:intergenic	45.0%
	ACTGAACTTGACAGAGGTGA+GGG	-	Chr5:28408104-28408123	None:intergenic	45.0%
	AGTTGGAAACAAGAACGCAG+TGG	-	Chr5:28407931-28407950	None:intergenic	45.0%
	ATCATCGCAGAGACAAGAGA+TGG	-	Chr5:28408297-28408316	None:intergenic	45.0%
	CCAATCCCAATGCAAAATCC+AGG	-	Chr5:28408909-28408928	None:intergenic	45.0%
	CGAACACAATCGATTGCCAT+TGG	-	Chr5:28408168-28408187	None:intergenic	45.0%
	CGAACTGTTCACAGTGACAT+CGG	-	Chr5:28407877-28407896	None:intergenic	45.0%
	CGCCTAGAACTTCATCATCA+CGG	-	Chr5:28407662-28407681	None:intergenic	45.0%
	CGGGATCGAATACTTTGATG+TGG	-	Chr5:28408058-28408077	None:intergenic	45.0%
	CTCTTACCTTGAGTTTGAGG+GGG	+	Chr5:28409041-28409060	MsG0580025973.01.T01:intron	45.0%
	GAATCTGCAAACACGCTTGT+CGG	-	Chr5:28408693-28408712	None:intergenic	45.0%
	GATGAAACACATATGCCTCC+AGG	-	Chr5:28408369-28408388	None:intergenic	45.0%
	GGCAACCCAAAATTTCGCAA+TGG	-	Chr5:28410529-28410548	None:intergenic	45.0%
	GTTCACATGAGGTTCAGATG+TGG	+	Chr5:28408849-28408868	MsG0580025973.01.T01:intron	45.0%
	GTTTACTAAGTGTACCCCCT+TGG	+	Chr5:28408962-28408981	MsG0580025973.01.T01:intron	45.0%
	TATGCTCGTAAGGGCAATGT+TGG	-	Chr5:28409430-28409449	None:intergenic	45.0%
	TCAGATGTTCAGTGAAGACC+TGG	+	Chr5:28408888-28408907	MsG0580025973.01.T01:intron	45.0%
	TCTTACCTTGAGTTTGAGGG+GGG	+	Chr5:28409042-28409061	MsG0580025973.01.T01:intron	45.0%
	TTGCGTCTGTTTCGAGATGA+TGG	+	Chr5:28408191-28408210	MsG0580025973.01.T01:intron	45.0%
	TTTCTGCAACACGATTCGAC+AGG	-	Chr5:28408609-28408628	None:intergenic	45.0%
!	ATCAAAGTATTCGATCCCGG+TGG	+	Chr5:28408059-28408078	MsG0580025973.01.T01:CDS	45.0%
!	CCTGGATTTTGCATTGGGAT+TGG	+	Chr5:28408906-28408925	MsG0580025973.01.T01:intron	45.0%
!	CGGAATGAATTTGTTCCACC+AGG	-	Chr5:28408236-28408255	None:intergenic	45.0%
!	GACCGTGATGATGAAGTTCT+AGG	+	Chr5:28407657-28407676	MsG0580025973.01.T01:CDS	45.0%
!	GGTTGCCTACATTGATGACA+AGG	+	Chr5:28410542-28410561	MsG0580025973.01.T01:CDS	45.0%
!	TGCATAAGCTGGTTCAGATG+CGG	+	Chr5:28408774-28408793	MsG0580025973.01.T01:intron	45.0%
!!	AGATGTGGTGTTGCATAAGC+TGG	+	Chr5:28408864-28408883	MsG0580025973.01.T01:intron	45.0%
!!	TGCACAGGTTGGTTTCAAGA+AGG	+	Chr5:28408800-28408819	MsG0580025973.01.T01:intron	45.0%
	AACATCCCCCCTCAAACTCA+AGG	-	Chr5:28409050-28409069	None:intergenic	50.0%
	GGCCATTCTCCATAGCTTCT+TGG	-	Chr5:28407731-28407750	None:intergenic	50.0%
	GGCTGGGTTTCTGTATAAGC+TGG	+	Chr5:28408827-28408846	MsG0580025973.01.T01:intron	50.0%
!	AGATGCGGTTTTGCACAGGT+TGG	+	Chr5:28408789-28408808	MsG0580025973.01.T01:intron	50.0%
!	GTTCAGATGCGGTTTTGCAC+AGG	+	Chr5:28408785-28408804	MsG0580025973.01.T01:intron	50.0%
!	TCTGTCGACTGTGTTTGCAG+CGG	+	Chr5:28408267-28408286	MsG0580025973.01.T01:intron	50.0%
!!	GGTTGGTTTCAAGAAGGTGC+TGG	+	Chr5:28408806-28408825	MsG0580025973.01.T01:intron	50.0%
!!	GTTTCAAGAAGGTGCTGGCT+GGG	+	Chr5:28408811-28408830	MsG0580025973.01.T01:intron	50.0%
!!	GGTTTCAAGAAGGTGCTGGC+TGG	+	Chr5:28408810-28408829	MsG0580025973.01.T01:intron	55.0%
	GACGCATTTCGGCGGAGTTG+TGG	-	Chr5:28408009-28408028	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	28407471	28410581	28407471	ID=MsG0580025973.01;Name=MsG0580025973.01
Chr5	mRNA	28407471	28410581	28407471	ID=MsG0580025973.01.T01;Parent=MsG0580025973.01;Name=MsG0580025973.01.T01;_AED=0.76;_eAED=0.76;_QI=0\|0\|0\|0.5\|1\|1\|2\|0\|324
Chr5	exon	28407471	28408080	28407471	ID=MsG0580025973.01.T01:exon:7485;Parent=MsG0580025973.01.T01
Chr5	exon	28410217	28410581	28410217	ID=MsG0580025973.01.T01:exon:7486;Parent=MsG0580025973.01.T01
Chr5	CDS	28407471	28408080	28407471	ID=MsG0580025973.01.T01:cds;Parent=MsG0580025973.01.T01
Chr5	CDS	28410217	28410581	28410217	ID=MsG0580025973.01.T01:cds;Parent=MsG0580025973.01.T01

Gene Sequence

>MsG0580025973.01.T01

ATGAATTCTAAGGGTTTTCCCTATGTTTCTTCCTATCAATCATACTTCTCCTATGAAGCTAATCTACAACTATTCGATCCTATTATTTCTGATATGGTATCAGAGCAATACCGTTGCGCATCAATCTATAGTGATCATGAAGATCAAGATTTGGCTTACGAAGATGAAGACAGAGAACTTGTTTCTGACCGTGATGATGAAGTTCTAGGCGAAGATGAAGATTGCTCATCTGAATCTCTACGTCAAGCATCACCATTCCAAGAAGCTATGGAGAATGGCCGTGTTTCGCAGATGATGAAGAAGACAACTTATCTCTTCCCTAACTTCTCAAAGCAGCAAGATTCAATTCTTGAATCTGGAATCATGGAGTGCAAGAATTGCTTTGATCTTCCTCAATTGTTTTCCGATGTCACTGTGAACAGTTCGATCAAGATTGACAAAATCATTGATTCAAGAACCACTGCGTTCTTGTTTCCAACTCCAAGTTTGATTCGGTTTTCACTCTTCGAGTTTGAGAAGTTGGTTTCGGCAACAACCACAACTCCGCCGAAATGCGTCAATTTCTTCTACAGTCTCAGCTGCGTCCACATCAAAGTATTCGATCCCGGTGAACTAGAATTTCCCTTAACAATGGCTACAAATGACTTGAAGCTTTTGGGTGCTCCGTTCAGTCCATTTGTATTAAGAGTAAAAATTGCCCTTAACATCAAAGGATTGGATTATGAGAACATTGTAGAAACCATGAATCCCAAAAGTGACTTGCTTCTTCAGTCAAATCCTGTGTACAAAAAAATTCCAGTTCTCATTCATGGAGATAAAGCCATTTGTGAATCTGCAATCATAGTTGAATATATTGATGAAGTTTGGAAAAATAATGGTACTTCTTCAATCCTCCTTCCTTCAAATGCTTATGATCGAGCCATTGCGAAATTTTGGGTTGCCTACATTGATGACAAGGTATTTCTAGCTTATTGA

Protein sequence

>MsG0580025973.01.T01

MNSKGFPYVSSYQSYFSYEANLQLFDPIISDMVSEQYRCASIYSDHEDQDLAYEDEDRELVSDRDDEVLGEDEDCSSESLRQASPFQEAMENGRVSQMMKKTTYLFPNFSKQQDSILESGIMECKNCFDLPQLFSDVTVNSSIKIDKIIDSRTTAFLFPTPSLIRFSLFEFEKLVSATTTTPPKCVNFFYSLSCVHIKVFDPGELEFPLTMATNDLKLLGAPFSPFVLRVKIALNIKGLDYENIVETMNPKSDLLLQSNPVYKKIPVLIHGDKAICESAIIVEYIDEVWKNNGTSSILLPSNAYDRAIAKFWVAYIDDKVFLAY*