Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040286.01.T01 | XP_003624784.1 | 96.835 | 158 | 5 | 0 | 1 | 158 | 1 | 158 | 1.22E-99 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040286.01.T01 | Q8W488 | 60.51 | 157 | 62 | 0 | 1 | 157 | 94 | 250 | 9.05E-61 | 198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040286.01.T01 | G7L2P4 | 96.835 | 158 | 5 | 0 | 1 | 158 | 1 | 158 | 5.82e-100 | 302 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047899.01 | MsG0780040286.01 | 0.803615 | 3.203353e-49 | 1.617107e-46 |
| MsG0080048357.01 | MsG0780040286.01 | 0.818627 | 1.775837e-52 | 1.336177e-49 |
| MsG0080048787.01 | MsG0780040286.01 | 0.814443 | 1.536414e-51 | 1.031088e-48 |
| MsG0180000144.01 | MsG0780040286.01 | 0.807663 | 4.528046e-50 | 2.536762e-47 |
| MsG0180000155.01 | MsG0780040286.01 | 0.803580 | 3.257051e-49 | 1.642844e-46 |
| MsG0180000404.01 | MsG0780040286.01 | 0.819078 | 1.402546e-52 | 1.068555e-49 |
| MsG0180000782.01 | MsG0780040286.01 | 0.801318 | 9.529910e-49 | 4.537378e-46 |
| MsG0180000836.01 | MsG0780040286.01 | 0.803061 | 4.171848e-49 | 2.076173e-46 |
| MsG0180003572.01 | MsG0780040286.01 | 0.804011 | 2.651193e-49 | 1.352057e-46 |
| MsG0180003741.01 | MsG0780040286.01 | 0.884555 | 1.735062e-71 | 1.149988e-67 |
| MsG0180004743.01 | MsG0780040286.01 | 0.801857 | 7.387480e-49 | 3.565699e-46 |
| MsG0180005049.01 | MsG0780040286.01 | 0.809173 | 2.156528e-50 | 1.257270e-47 |
| MsG0180005113.01 | MsG0780040286.01 | 0.821328 | 4.281518e-53 | 3.472648e-50 |
| MsG0180005153.01 | MsG0780040286.01 | 0.848329 | 6.571100e-60 | 1.201643e-56 |
| MsG0180005540.01 | MsG0780040286.01 | 0.815858 | 7.453818e-52 | 5.198281e-49 |
| MsG0180005575.01 | MsG0780040286.01 | 0.822537 | 2.246202e-53 | 1.885506e-50 |
| MsG0180006017.01 | MsG0780040286.01 | 0.822299 | 2.552056e-53 | 2.127689e-50 |
| MsG0180006225.01 | MsG0780040286.01 | 0.804774 | 1.838142e-49 | 9.560268e-47 |
| MsG0780040286.01 | MsG0780040287.01 | 0.891433 | 3.990298e-74 | 3.498020e-70 |
| MsG0780040286.01 | MsG0780040430.01 | 0.837698 | 4.458078e-57 | 5.838196e-54 |
| MsG0780040286.01 | MsG0780040431.01 | 0.822002 | 2.990290e-53 | 2.471859e-50 |
| MsG0780040286.01 | MsG0780040432.01 | 0.822097 | 2.842857e-53 | 2.356244e-50 |
| MsG0780040286.01 | MsG0780040846.01 | 0.837526 | 4.934611e-57 | 6.427731e-54 |
| MsG0780040286.01 | MsG0780040966.01 | 0.812209 | 4.756830e-51 | 3.005963e-48 |
| MsG0780040286.01 | MsG0780041259.01 | 0.887323 | 1.578867e-72 | 1.168623e-68 |
| MsG0780040286.01 | MsG0780041482.01 | 0.827625 | 1.410510e-54 | 1.368959e-51 |
| MsG0780040286.01 | MsG0780041698.01 | 0.845737 | 3.370530e-59 | 5.672026e-56 |
| MsG0780040286.01 | MsG0780041699.01 | 0.842399 | 2.648679e-58 | 4.011399e-55 |
| MsG0780040286.01 | MsG0880041834.01 | 0.816217 | 6.195799e-52 | 4.363999e-49 |
| MsG0780040286.01 | MsG0880041858.01 | 0.803860 | 2.849029e-49 | 1.447365e-46 |
| MsG0780040286.01 | MsG0880042442.01 | 0.808076 | 3.698970e-50 | 2.094907e-47 |
| MsG0780040286.01 | MsG0880042734.01 | 0.801703 | 7.944578e-49 | 3.819401e-46 |
| MsG0780040286.01 | MsG0880043480.01 | 0.804881 | 1.746331e-49 | 9.108488e-47 |
| MsG0780040286.01 | MsG0880043521.01 | 0.812779 | 3.570110e-51 | 2.290316e-48 |
| MsG0780040286.01 | MsG0880044704.01 | 0.801751 | 7.767505e-49 | 3.738788e-46 |
| MsG0780040286.01 | MsG0880045145.01 | 0.809543 | 1.796528e-50 | 1.057761e-47 |
| MsG0780040286.01 | MsG0880045460.01 | 0.806918 | 6.513204e-50 | 3.579080e-47 |
| MsG0780040286.01 | MsG0880045585.01 | 0.832852 | 7.462205e-56 | 8.444043e-53 |
| MsG0780040286.01 | MsG0880045586.01 | 0.831251 | 1.855896e-55 | 2.002637e-52 |
| MsG0780040286.01 | MsG0880046636.01 | 0.811345 | 7.332547e-51 | 4.527532e-48 |
| MsG0780040286.01 | MsG0880046901.01 | 0.805357 | 1.388034e-49 | 7.328289e-47 |
| MsG0780040286.01 | MsG0880046942.01 | 0.836537 | 8.827737e-57 | 1.115754e-53 |
| MsG0780040286.01 | MsG0880047472.01 | 0.802795 | 4.735516e-49 | 2.340980e-46 |
| MsG0780040286.01 | MsG0880047473.01 | 0.812818 | 3.501713e-51 | 2.248627e-48 |
| MsG0780040286.01 | MsG0880047696.01 | 0.807016 | 6.210376e-50 | 3.421290e-47 |
| MsG0380011496.01 | MsG0780040286.01 | 0.854163 | 1.477866e-61 | 3.271414e-58 |
| MsG0380011501.01 | MsG0780040286.01 | 0.860734 | 1.679819e-63 | 4.638792e-60 |
| MsG0380012067.01 | MsG0780040286.01 | 0.804086 | 2.556914e-49 | 1.306501e-46 |
| MsG0680030784.01 | MsG0780040286.01 | 0.839507 | 1.520804e-57 | 2.104621e-54 |
| MsG0680030908.01 | MsG0780040286.01 | 0.805454 | 1.324853e-49 | 7.012094e-47 |
| MsG0680031707.01 | MsG0780040286.01 | 0.801197 | 1.008866e-48 | 4.788738e-46 |
| MsG0680031959.01 | MsG0780040286.01 | 0.845064 | 5.127248e-59 | 8.442802e-56 |
| MsG0680034835.01 | MsG0780040286.01 | 0.809295 | 2.030706e-50 | 1.187765e-47 |
| MsG0680034913.01 | MsG0780040286.01 | 0.814331 | 1.626827e-51 | 1.088447e-48 |
| MsG0480018909.01 | MsG0780040286.01 | 0.802842 | 4.631437e-49 | 2.292281e-46 |
| MsG0480019279.01 | MsG0780040286.01 | 0.805263 | 1.452612e-49 | 7.650236e-47 |
| MsG0480021195.01 | MsG0780040286.01 | 0.817174 | 3.780045e-52 | 2.733008e-49 |
| MsG0480023172.01 | MsG0780040286.01 | 0.820098 | 8.205027e-53 | 6.432229e-50 |
| MsG0480023600.01 | MsG0780040286.01 | 0.805024 | 1.629612e-49 | 8.530178e-47 |
| MsG0480024022.01 | MsG0780040286.01 | 0.817648 | 2.956652e-52 | 2.165601e-49 |
| MsG0580024966.01 | MsG0780040286.01 | 0.837792 | 4.217926e-57 | 5.539576e-54 |
| MsG0580025449.01 | MsG0780040286.01 | 0.805445 | 1.330138e-49 | 7.038421e-47 |
| MsG0580025466.01 | MsG0780040286.01 | 0.830086 | 3.580184e-55 | 3.733629e-52 |
| MsG0580025973.01 | MsG0780040286.01 | 0.801453 | 8.940740e-49 | 4.271404e-46 |
| MsG0380015944.01 | MsG0780040286.01 | 0.817838 | 2.678667e-52 | 1.972310e-49 |
| MsG0380016005.01 | MsG0780040286.01 | 0.801175 | 1.019369e-48 | 4.835966e-46 |
| MsG0380016407.01 | MsG0780040286.01 | 0.811999 | 5.284644e-51 | 3.320376e-48 |
| MsG0380016923.01 | MsG0780040286.01 | 0.800033 | 1.742616e-48 | 8.030983e-46 |
| MsG0380017869.01 | MsG0780040286.01 | 0.807130 | 5.873058e-50 | 3.245004e-47 |
| MsG0480018200.01 | MsG0780040286.01 | 0.828044 | 1.119067e-54 | 1.099659e-51 |
| MsG0580027655.01 | MsG0780040286.01 | 0.806805 | 6.881440e-50 | 3.770434e-47 |
| MsG0580027925.01 | MsG0780040286.01 | 0.838472 | 2.818542e-57 | 3.779155e-54 |
| MsG0580028960.01 | MsG0780040286.01 | 0.816688 | 4.862074e-52 | 3.468684e-49 |
| MsG0580029236.01 | MsG0780040286.01 | 0.801963 | 7.026484e-49 | 3.400354e-46 |
| MsG0580029310.01 | MsG0780040286.01 | 0.850464 | 1.670236e-60 | 3.274388e-57 |
| MsG0580029647.01 | MsG0780040286.01 | 0.801454 | 8.936816e-49 | 4.269604e-46 |
| MsG0580029736.01 | MsG0780040286.01 | 0.832992 | 6.888764e-56 | 7.828497e-53 |
| MsG0680030328.01 | MsG0780040286.01 | 0.823763 | 1.162402e-53 | 1.010233e-50 |
| MsG0280006461.01 | MsG0780040286.01 | 0.806819 | 6.836376e-50 | 3.747105e-47 |
| MsG0280006966.01 | MsG0780040286.01 | 0.804845 | 1.776129e-49 | 9.255111e-47 |
| MsG0280007432.01 | MsG0780040286.01 | 0.824648 | 7.203648e-54 | 6.420073e-51 |
| MsG0280007452.01 | MsG0780040286.01 | 0.815150 | 1.071248e-51 | 7.327309e-49 |
| MsG0280007506.01 | MsG0780040286.01 | 0.826523 | 2.589746e-54 | 2.434481e-51 |
| MsG0280007527.01 | MsG0780040286.01 | 0.804031 | 2.625309e-49 | 1.339572e-46 |
| MsG0280007750.01 | MsG0780040286.01 | 0.806894 | 6.591312e-50 | 3.619649e-47 |
| MsG0280007955.01 | MsG0780040286.01 | 0.827428 | 1.572716e-54 | 1.517937e-51 |
| MsG0280008390.01 | MsG0780040286.01 | 0.817871 | 2.632993e-52 | 1.940422e-49 |
| MsG0280008395.01 | MsG0780040286.01 | 0.808598 | 2.863208e-50 | 1.643904e-47 |
| MsG0280008418.01 | MsG0780040286.01 | 0.812929 | 3.309664e-51 | 2.131679e-48 |
| MsG0280008457.01 | MsG0780040286.01 | 0.815248 | 1.018793e-51 | 6.987114e-49 |
| MsG0280009920.01 | MsG0780040286.01 | 0.800095 | 1.692268e-48 | 7.811448e-46 |
| MsG0280010320.01 | MsG0780040286.01 | 0.805095 | 1.574795e-49 | 8.258418e-47 |
| MsG0680035658.01 | MsG0780040286.01 | 0.816780 | 4.635920e-52 | 3.315875e-49 |
| MsG0780036307.01 | MsG0780040286.01 | 0.818825 | 1.601427e-52 | 1.211595e-49 |
| MsG0780036593.01 | MsG0780040286.01 | 0.809655 | 1.700012e-50 | 1.003938e-47 |
| MsG0780036757.01 | MsG0780040286.01 | 0.812922 | 3.322551e-51 | 2.139540e-48 |
| MsG0780036836.01 | MsG0780040286.01 | 0.802163 | 6.392351e-49 | 3.109408e-46 |
| MsG0780037341.01 | MsG0780040286.01 | 0.809843 | 1.548352e-50 | 9.189123e-48 |
| MsG0780037395.01 | MsG0780040286.01 | 0.804214 | 2.404749e-49 | 1.232748e-46 |
| MsG0780039443.01 | MsG0780040286.01 | 0.815259 | 1.013327e-51 | 6.951832e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040286.01.T01 | MTR_7g087430 | 96.835 | 158 | 5 | 0 | 1 | 158 | 1 | 158 | 1.48e-103 | 302 |
| MsG0780040286.01.T01 | MTR_7g087410 | 77.848 | 158 | 35 | 0 | 1 | 158 | 1 | 158 | 3.75e-86 | 258 |
| MsG0780040286.01.T01 | MTR_7g087410 | 77.848 | 158 | 35 | 0 | 1 | 158 | 90 | 247 | 3.80e-85 | 258 |
| MsG0780040286.01.T01 | MTR_7g087400 | 70.886 | 158 | 45 | 1 | 1 | 158 | 89 | 245 | 7.22e-73 | 226 |
| MsG0780040286.01.T01 | MTR_6g027200 | 68.153 | 157 | 49 | 1 | 1 | 157 | 96 | 251 | 2.13e-68 | 215 |
| MsG0780040286.01.T01 | MTR_6g027190 | 66.242 | 157 | 52 | 1 | 1 | 157 | 84 | 239 | 1.76e-66 | 210 |
| MsG0780040286.01.T01 | MTR_7g087370 | 56.962 | 158 | 38 | 2 | 1 | 158 | 89 | 216 | 5.31e-50 | 166 |
| MsG0780040286.01.T01 | MTR_3g099720 | 45.860 | 157 | 85 | 0 | 1 | 157 | 100 | 256 | 3.48e-46 | 157 |
| MsG0780040286.01.T01 | MTR_5g032720 | 45.860 | 157 | 85 | 0 | 1 | 157 | 95 | 251 | 1.90e-44 | 152 |
| MsG0780040286.01.T01 | MTR_1g021740 | 45.860 | 157 | 85 | 0 | 1 | 157 | 94 | 250 | 3.35e-41 | 144 |
| MsG0780040286.01.T01 | MTR_8g069470 | 41.772 | 158 | 92 | 0 | 1 | 158 | 109 | 266 | 4.87e-40 | 141 |
| MsG0780040286.01.T01 | MTR_1g100180 | 45.223 | 157 | 85 | 1 | 1 | 157 | 102 | 257 | 8.15e-40 | 140 |
| MsG0780040286.01.T01 | MTR_5g032750 | 47.239 | 163 | 74 | 4 | 1 | 157 | 95 | 251 | 8.05e-39 | 137 |
| MsG0780040286.01.T01 | MTR_4g048000 | 44.654 | 159 | 87 | 1 | 1 | 158 | 123 | 281 | 1.97e-37 | 134 |
| MsG0780040286.01.T01 | MTR_3g099700 | 47.771 | 157 | 82 | 0 | 1 | 157 | 105 | 261 | 2.60e-37 | 134 |
| MsG0780040286.01.T01 | MTR_2g088400 | 43.038 | 158 | 89 | 1 | 1 | 157 | 111 | 268 | 3.65e-37 | 132 |
| MsG0780040286.01.T01 | MTR_2g088400 | 43.038 | 158 | 89 | 1 | 1 | 157 | 111 | 268 | 8.41e-37 | 132 |
| MsG0780040286.01.T01 | MTR_2g022980 | 42.405 | 158 | 90 | 1 | 1 | 157 | 107 | 264 | 2.48e-36 | 130 |
| MsG0780040286.01.T01 | MTR_5g033100 | 43.038 | 158 | 90 | 0 | 1 | 158 | 115 | 272 | 5.52e-35 | 127 |
| MsG0780040286.01.T01 | MTR_6g047640 | 40.127 | 157 | 93 | 1 | 1 | 157 | 90 | 245 | 8.51e-33 | 121 |
| MsG0780040286.01.T01 | MTR_6g047640 | 40.127 | 157 | 93 | 1 | 1 | 157 | 90 | 245 | 1.13e-32 | 120 |
| MsG0780040286.01.T01 | MTR_1g108810 | 39.873 | 158 | 94 | 1 | 1 | 157 | 93 | 250 | 2.15e-28 | 109 |
| MsG0780040286.01.T01 | MTR_6g047610 | 39.490 | 157 | 94 | 1 | 1 | 157 | 89 | 244 | 4.81e-28 | 108 |
| MsG0780040286.01.T01 | MTR_6g047590 | 36.943 | 157 | 98 | 1 | 1 | 157 | 89 | 244 | 6.31e-28 | 107 |
| MsG0780040286.01.T01 | MTR_6g081240 | 41.250 | 160 | 89 | 3 | 1 | 157 | 69 | 226 | 2.85e-25 | 100 |
| MsG0780040286.01.T01 | MTR_6g081410 | 37.975 | 158 | 97 | 1 | 1 | 157 | 84 | 241 | 4.88e-25 | 100 |
| MsG0780040286.01.T01 | MTR_6g081300 | 40.994 | 161 | 88 | 5 | 1 | 157 | 69 | 226 | 1.11e-24 | 99.0 |
| MsG0780040286.01.T01 | MTR_6g066380 | 39.130 | 161 | 91 | 4 | 1 | 157 | 86 | 243 | 5.54e-24 | 97.1 |
| MsG0780040286.01.T01 | MTR_6g081780 | 37.500 | 160 | 95 | 3 | 1 | 157 | 84 | 241 | 7.04e-24 | 96.7 |
| MsG0780040286.01.T01 | MTR_8g063590 | 35.443 | 158 | 101 | 1 | 1 | 157 | 112 | 269 | 1.12e-22 | 93.6 |
| MsG0780040286.01.T01 | MTR_6g081810 | 38.519 | 135 | 83 | 0 | 1 | 135 | 86 | 220 | 3.89e-22 | 91.7 |
| MsG0780040286.01.T01 | MTR_5g087930 | 35.443 | 158 | 101 | 1 | 1 | 157 | 85 | 242 | 1.05e-21 | 90.5 |
| MsG0780040286.01.T01 | MTR_6g081390 | 37.107 | 159 | 95 | 3 | 2 | 157 | 73 | 229 | 5.03e-21 | 88.6 |
| MsG0780040286.01.T01 | MTR_6g081310 | 37.671 | 146 | 80 | 1 | 1 | 135 | 56 | 201 | 1.11e-19 | 84.7 |
| MsG0780040286.01.T01 | MTR_8g106670 | 35.897 | 156 | 99 | 1 | 3 | 157 | 73 | 228 | 6.03e-19 | 82.8 |
| MsG0780040286.01.T01 | MTR_3g111020 | 33.103 | 145 | 93 | 2 | 1 | 145 | 110 | 250 | 1.68e-18 | 81.6 |
| MsG0780040286.01.T01 | MTR_6g081400 | 35.220 | 159 | 98 | 3 | 2 | 157 | 76 | 232 | 1.76e-18 | 81.6 |
| MsG0780040286.01.T01 | MTR_7g082810 | 36.709 | 158 | 99 | 1 | 1 | 157 | 79 | 236 | 3.71e-18 | 80.5 |
| MsG0780040286.01.T01 | MTR_2g078930 | 33.962 | 159 | 102 | 2 | 1 | 157 | 102 | 259 | 5.10e-18 | 80.1 |
| MsG0780040286.01.T01 | MTR_5g090290 | 39.241 | 158 | 95 | 1 | 1 | 157 | 105 | 262 | 5.15e-18 | 80.1 |
| MsG0780040286.01.T01 | MTR_2g078960 | 33.544 | 158 | 104 | 1 | 1 | 157 | 92 | 249 | 7.42e-18 | 79.7 |
| MsG0780040286.01.T01 | MTR_2g079020 | 35.220 | 159 | 100 | 2 | 1 | 157 | 96 | 253 | 2.10e-17 | 78.6 |
| MsG0780040286.01.T01 | MTR_1g109060 | 37.778 | 135 | 84 | 0 | 1 | 135 | 83 | 217 | 3.45e-17 | 77.8 |
| MsG0780040286.01.T01 | MTR_1g109060 | 37.778 | 135 | 84 | 0 | 1 | 135 | 83 | 217 | 3.53e-17 | 77.8 |
| MsG0780040286.01.T01 | MTR_5g090280 | 33.939 | 165 | 94 | 4 | 1 | 157 | 1 | 158 | 4.50e-17 | 77.4 |
| MsG0780040286.01.T01 | MTR_1g108840 | 36.296 | 135 | 86 | 0 | 1 | 135 | 100 | 234 | 5.24e-17 | 77.4 |
| MsG0780040286.01.T01 | MTR_2g078970 | 35.849 | 159 | 99 | 2 | 1 | 157 | 90 | 247 | 5.26e-17 | 77.4 |
| MsG0780040286.01.T01 | MTR_7g082800 | 35.556 | 135 | 87 | 0 | 1 | 135 | 1 | 135 | 1.48e-16 | 75.9 |
| MsG0780040286.01.T01 | MTR_6g004220 | 31.111 | 135 | 93 | 0 | 1 | 135 | 90 | 224 | 1.53e-16 | 75.5 |
| MsG0780040286.01.T01 | MTR_6g004220 | 31.111 | 135 | 93 | 0 | 1 | 135 | 90 | 224 | 2.24e-16 | 75.5 |
| MsG0780040286.01.T01 | MTR_6g004220 | 31.111 | 135 | 93 | 0 | 1 | 135 | 90 | 224 | 2.85e-16 | 75.1 |
| MsG0780040286.01.T01 | MTR_6g004220 | 31.111 | 135 | 93 | 0 | 1 | 135 | 83 | 217 | 3.58e-16 | 75.1 |
| MsG0780040286.01.T01 | MTR_5g010830 | 33.065 | 124 | 83 | 0 | 1 | 124 | 124 | 247 | 2.39e-15 | 72.8 |
| MsG0780040286.01.T01 | MTR_0039s0080 | 31.677 | 161 | 103 | 3 | 1 | 157 | 97 | 254 | 2.24e-14 | 69.7 |
| MsG0780040286.01.T01 | MTR_1g101500 | 30.723 | 166 | 98 | 2 | 1 | 157 | 123 | 280 | 4.30e-14 | 68.9 |
| MsG0780040286.01.T01 | MTR_5g067460 | 28.966 | 145 | 99 | 1 | 1 | 145 | 114 | 254 | 4.96e-14 | 68.9 |
| MsG0780040286.01.T01 | MTR_1g108990 | 35.556 | 135 | 87 | 0 | 1 | 135 | 84 | 218 | 6.06e-13 | 65.5 |
| MsG0780040286.01.T01 | MTR_6g043810 | 28.462 | 130 | 92 | 1 | 1 | 129 | 82 | 211 | 2.54e-11 | 60.8 |
| MsG0780040286.01.T01 | MTR_6g043810 | 28.462 | 130 | 92 | 1 | 1 | 129 | 92 | 221 | 2.65e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040286.01.T01 | AT1G33110 | 60.510 | 157 | 62 | 0 | 1 | 157 | 94 | 250 | 6.63e-63 | 198 |
| MsG0780040286.01.T01 | AT1G33110 | 60.510 | 157 | 62 | 0 | 1 | 157 | 94 | 250 | 9.23e-62 | 198 |
| MsG0780040286.01.T01 | AT1G33080 | 58.599 | 157 | 65 | 0 | 1 | 157 | 94 | 250 | 1.66e-60 | 194 |
| MsG0780040286.01.T01 | AT1G33080 | 58.599 | 157 | 65 | 0 | 1 | 157 | 94 | 250 | 1.79e-60 | 194 |
| MsG0780040286.01.T01 | AT1G33100 | 56.688 | 157 | 68 | 0 | 1 | 157 | 91 | 247 | 4.30e-58 | 188 |
| MsG0780040286.01.T01 | AT1G33090 | 55.414 | 157 | 70 | 0 | 1 | 157 | 94 | 250 | 1.78e-57 | 187 |
| MsG0780040286.01.T01 | AT5G65380 | 51.592 | 157 | 76 | 0 | 1 | 157 | 95 | 251 | 3.50e-45 | 154 |
| MsG0780040286.01.T01 | AT5G44050 | 46.497 | 157 | 84 | 0 | 1 | 157 | 98 | 254 | 1.75e-43 | 150 |
| MsG0780040286.01.T01 | AT1G47530 | 45.223 | 157 | 86 | 0 | 1 | 157 | 1 | 157 | 1.16e-41 | 143 |
| MsG0780040286.01.T01 | AT1G47530 | 45.223 | 157 | 86 | 0 | 1 | 157 | 93 | 249 | 5.66e-41 | 143 |
| MsG0780040286.01.T01 | AT5G10420 | 48.408 | 157 | 81 | 0 | 1 | 157 | 96 | 252 | 6.19e-41 | 143 |
| MsG0780040286.01.T01 | AT4G00350 | 45.223 | 157 | 85 | 1 | 1 | 157 | 146 | 301 | 1.03e-40 | 143 |
| MsG0780040286.01.T01 | AT4G25640 | 43.949 | 157 | 87 | 1 | 1 | 157 | 92 | 247 | 1.80e-39 | 139 |
| MsG0780040286.01.T01 | AT4G25640 | 43.949 | 157 | 87 | 1 | 1 | 157 | 92 | 247 | 2.69e-39 | 139 |
| MsG0780040286.01.T01 | AT4G25640 | 43.949 | 157 | 87 | 1 | 1 | 157 | 92 | 247 | 3.44e-39 | 139 |
| MsG0780040286.01.T01 | AT3G26590 | 43.312 | 157 | 89 | 0 | 1 | 157 | 1 | 157 | 8.57e-39 | 135 |
| MsG0780040286.01.T01 | AT3G26590 | 43.312 | 157 | 89 | 0 | 1 | 157 | 103 | 259 | 3.10e-38 | 136 |
| MsG0780040286.01.T01 | AT5G38030 | 42.038 | 157 | 91 | 0 | 1 | 157 | 103 | 259 | 9.40e-38 | 135 |
| MsG0780040286.01.T01 | AT5G17700 | 39.490 | 157 | 95 | 0 | 1 | 157 | 92 | 248 | 1.87e-37 | 132 |
| MsG0780040286.01.T01 | AT1G11670 | 46.835 | 158 | 83 | 1 | 1 | 157 | 108 | 265 | 4.65e-37 | 133 |
| MsG0780040286.01.T01 | AT5G17700 | 39.490 | 157 | 95 | 0 | 1 | 157 | 92 | 248 | 5.80e-37 | 132 |
| MsG0780040286.01.T01 | AT5G17700 | 39.490 | 157 | 95 | 0 | 1 | 157 | 92 | 248 | 5.80e-37 | 132 |
| MsG0780040286.01.T01 | AT3G21690 | 46.835 | 158 | 83 | 1 | 1 | 157 | 110 | 267 | 1.84e-36 | 131 |
| MsG0780040286.01.T01 | AT1G23300 | 45.860 | 157 | 85 | 0 | 1 | 157 | 102 | 258 | 1.39e-35 | 129 |
| MsG0780040286.01.T01 | AT1G61890 | 43.038 | 158 | 89 | 1 | 1 | 157 | 105 | 262 | 1.80e-35 | 128 |
| MsG0780040286.01.T01 | AT3G03620 | 39.490 | 157 | 95 | 0 | 1 | 157 | 95 | 251 | 2.26e-35 | 128 |
| MsG0780040286.01.T01 | AT3G03620 | 39.490 | 157 | 95 | 0 | 1 | 157 | 95 | 251 | 2.26e-35 | 128 |
| MsG0780040286.01.T01 | AT1G61890 | 43.038 | 158 | 89 | 1 | 1 | 157 | 105 | 262 | 2.86e-35 | 128 |
| MsG0780040286.01.T01 | AT1G61890 | 43.038 | 158 | 89 | 1 | 1 | 157 | 105 | 262 | 3.11e-35 | 128 |
| MsG0780040286.01.T01 | AT1G12950 | 40.127 | 157 | 94 | 0 | 1 | 157 | 125 | 281 | 3.91e-35 | 128 |
| MsG0780040286.01.T01 | AT5G52450 | 39.623 | 159 | 91 | 2 | 2 | 157 | 85 | 241 | 5.57e-28 | 108 |
| MsG0780040286.01.T01 | AT2G34360 | 36.025 | 161 | 94 | 2 | 2 | 157 | 86 | 242 | 4.68e-27 | 105 |
| MsG0780040286.01.T01 | AT2G34360 | 36.025 | 161 | 94 | 2 | 2 | 157 | 86 | 242 | 7.88e-27 | 105 |
| MsG0780040286.01.T01 | AT1G73700 | 38.509 | 161 | 90 | 2 | 2 | 157 | 83 | 239 | 1.10e-26 | 104 |
| MsG0780040286.01.T01 | AT4G21903 | 37.975 | 158 | 97 | 1 | 1 | 157 | 1 | 158 | 2.25e-26 | 102 |
| MsG0780040286.01.T01 | AT4G21910 | 37.342 | 158 | 98 | 1 | 1 | 157 | 112 | 269 | 2.82e-26 | 103 |
| MsG0780040286.01.T01 | AT4G21910 | 37.342 | 158 | 98 | 1 | 1 | 157 | 112 | 269 | 2.82e-26 | 103 |
| MsG0780040286.01.T01 | AT4G21910 | 37.342 | 158 | 98 | 1 | 1 | 157 | 114 | 271 | 3.37e-26 | 103 |
| MsG0780040286.01.T01 | AT4G21910 | 37.342 | 158 | 98 | 1 | 1 | 157 | 114 | 271 | 3.37e-26 | 103 |
| MsG0780040286.01.T01 | AT4G21903 | 37.975 | 158 | 97 | 1 | 1 | 157 | 110 | 267 | 4.27e-26 | 103 |
| MsG0780040286.01.T01 | AT4G21903 | 37.975 | 158 | 97 | 1 | 1 | 157 | 110 | 267 | 4.83e-26 | 103 |
| MsG0780040286.01.T01 | AT3G59030 | 34.810 | 158 | 102 | 1 | 1 | 157 | 109 | 266 | 2.99e-23 | 94.7 |
| MsG0780040286.01.T01 | AT3G59030 | 36.478 | 159 | 98 | 3 | 1 | 157 | 109 | 266 | 4.58e-23 | 94.7 |
| MsG0780040286.01.T01 | AT1G71140 | 37.778 | 135 | 84 | 0 | 1 | 135 | 84 | 218 | 8.90e-20 | 85.1 |
| MsG0780040286.01.T01 | AT1G66760 | 37.226 | 137 | 82 | 2 | 1 | 135 | 86 | 220 | 3.17e-19 | 83.2 |
| MsG0780040286.01.T01 | AT1G66760 | 37.226 | 137 | 82 | 2 | 1 | 135 | 86 | 220 | 3.27e-19 | 83.6 |
| MsG0780040286.01.T01 | AT1G66760 | 37.226 | 137 | 82 | 2 | 1 | 135 | 86 | 220 | 3.81e-19 | 83.6 |
| MsG0780040286.01.T01 | AT2G04080 | 36.567 | 134 | 85 | 0 | 1 | 134 | 85 | 218 | 9.65e-18 | 79.3 |
| MsG0780040286.01.T01 | AT2G04080 | 36.567 | 134 | 85 | 0 | 1 | 134 | 85 | 218 | 1.21e-17 | 79.3 |
| MsG0780040286.01.T01 | AT1G64820 | 35.075 | 134 | 87 | 0 | 2 | 135 | 88 | 221 | 2.12e-17 | 78.6 |
| MsG0780040286.01.T01 | AT3G23560 | 37.037 | 162 | 93 | 5 | 1 | 157 | 97 | 254 | 2.23e-17 | 78.2 |
| MsG0780040286.01.T01 | AT3G23560 | 37.037 | 162 | 93 | 5 | 1 | 157 | 97 | 254 | 3.19e-17 | 77.8 |
| MsG0780040286.01.T01 | AT1G66780 | 35.461 | 141 | 90 | 1 | 1 | 141 | 93 | 232 | 3.35e-17 | 77.8 |
| MsG0780040286.01.T01 | AT1G15150 | 35.065 | 154 | 97 | 2 | 1 | 152 | 89 | 241 | 8.50e-17 | 76.6 |
| MsG0780040286.01.T01 | AT1G15160 | 35.065 | 154 | 97 | 2 | 1 | 152 | 89 | 241 | 1.38e-16 | 76.3 |
| MsG0780040286.01.T01 | AT2G04040 | 36.296 | 135 | 84 | 2 | 1 | 134 | 85 | 218 | 1.86e-16 | 75.9 |
| MsG0780040286.01.T01 | AT1G15170 | 36.538 | 156 | 92 | 4 | 1 | 152 | 92 | 244 | 3.03e-16 | 75.1 |
| MsG0780040286.01.T01 | AT2G04050 | 35.075 | 134 | 87 | 0 | 1 | 134 | 85 | 218 | 1.10e-15 | 73.6 |
| MsG0780040286.01.T01 | AT3G23550 | 31.707 | 164 | 99 | 3 | 1 | 157 | 89 | 246 | 1.90e-15 | 72.8 |
| MsG0780040286.01.T01 | AT2G04070 | 36.296 | 135 | 84 | 2 | 1 | 134 | 85 | 218 | 3.38e-15 | 72.0 |
| MsG0780040286.01.T01 | AT2G04100 | 35.556 | 135 | 85 | 2 | 1 | 134 | 88 | 221 | 8.42e-15 | 70.9 |
| MsG0780040286.01.T01 | AT2G04100 | 35.556 | 135 | 85 | 2 | 1 | 134 | 88 | 221 | 1.04e-14 | 70.9 |
| MsG0780040286.01.T01 | AT1G15180 | 34.416 | 154 | 98 | 2 | 1 | 152 | 93 | 245 | 1.44e-14 | 70.5 |
| MsG0780040286.01.T01 | AT1G58340 | 31.008 | 129 | 89 | 0 | 1 | 129 | 116 | 244 | 5.29e-14 | 68.9 |
| MsG0780040286.01.T01 | AT2G04090 | 34.815 | 135 | 86 | 2 | 1 | 134 | 88 | 221 | 6.80e-14 | 68.6 |
| MsG0780040286.01.T01 | AT2G38510 | 26.543 | 162 | 112 | 3 | 1 | 158 | 64 | 222 | 3.71e-12 | 63.5 |
Find 36 sgRNAs with CRISPR-Local
Find 36 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATAAGTTGACCAATATT+TGG | 0.173372 | 7:-75485921 | None:intergenic |
| TTTCAATAAGTTTGGCCTTA+TGG | 0.194756 | 7:+75485895 | MsG0780040286.01.T01:CDS |
| TGGCCTAGGATAATTAAAAT+TGG | 0.258540 | 7:-75485657 | None:intergenic |
| GCAATAAAAGCAAACAAAAT+TGG | 0.278019 | 7:-75485729 | None:intergenic |
| TGCAATGATTTCAATAAGTT+TGG | 0.280321 | 7:+75485887 | MsG0780040286.01.T01:CDS |
| CTGTTCATGTATTACTCTCT+TGG | 0.280963 | 7:+75485829 | MsG0780040286.01.T01:CDS |
| GCCTTATGGATTCCAAATAT+TGG | 0.286497 | 7:+75485909 | MsG0780040286.01.T01:CDS |
| TAGCAGGAACCATTGGTTAT+TGG | 0.337312 | 7:+75485700 | MsG0780040286.01.T01:CDS |
| GCATACGGTGCAAAAGAATA+TGG | 0.338654 | 7:+75485549 | MsG0780040286.01.T01:CDS |
| CTTGTGCTATGGTTTCATCT+TGG | 0.374871 | 7:-75485677 | None:intergenic |
| TTTGTGACTGAAGGAATGTT+TGG | 0.384067 | 7:-75485764 | None:intergenic |
| TAACAATGAAAATCAAGCTT+GGG | 0.412212 | 7:+75485856 | MsG0780040286.01.T01:CDS |
| CTATGGTTTCATCTTGGCCT+AGG | 0.413225 | 7:-75485671 | None:intergenic |
| GAACATTATTATTGCATACT+TGG | 0.415000 | 7:+75485791 | MsG0780040286.01.T01:CDS |
| ACCAATATTTGGAATCCATA+AGG | 0.415630 | 7:-75485910 | None:intergenic |
| AAAATCAAGCTTGGGATTGT+TGG | 0.452702 | 7:+75485864 | MsG0780040286.01.T01:CDS |
| TGCAAAAGAATATGGAATGA+TGG | 0.459585 | 7:+75485557 | MsG0780040286.01.T01:CDS |
| GTGGTTGGTGTTCTGATACT+TGG | 0.477864 | 7:+75485952 | MsG0780040286.01.T01:CDS |
| GGTTCCTGCTACTTGTGCTA+TGG | 0.479039 | 7:-75485688 | None:intergenic |
| TTAACAATGAAAATCAAGCT+TGG | 0.486475 | 7:+75485855 | MsG0780040286.01.T01:CDS |
| GAGTATATCTTCAAAGATCA+TGG | 0.493939 | 7:+75485580 | MsG0780040286.01.T01:CDS |
| TTGTGACTGAAGGAATGTTT+GGG | 0.500082 | 7:-75485763 | None:intergenic |
| GCACAAGTAGCAGGAACCAT+TGG | 0.529388 | 7:+75485693 | MsG0780040286.01.T01:CDS |
| GAATGTTTGGGTAGTGAATG+AGG | 0.529494 | 7:-75485751 | None:intergenic |
| GTTAGGAATGGCTAGTGCAT+TGG | 0.537339 | 7:+75485509 | None:intergenic |
| TTATATTTATTACATGTGGT+TGG | 0.539646 | 7:+75485937 | MsG0780040286.01.T01:CDS |
| GCAAAAGAATATGGAATGAT+GGG | 0.553514 | 7:+75485558 | MsG0780040286.01.T01:CDS |
| CAACTTATATTTATTACATG+TGG | 0.553817 | 7:+75485933 | MsG0780040286.01.T01:CDS |
| TGTTCCTGCTTTGTGACTGA+AGG | 0.561666 | 7:-75485773 | None:intergenic |
| GAAACCATAGCACAAGTAGC+AGG | 0.568631 | 7:+75485684 | MsG0780040286.01.T01:CDS |
| TGGTGTTCTGATACTTGGAA+AGG | 0.574232 | 7:+75485957 | MsG0780040286.01.T01:CDS |
| GGAGTTGTGAAGATGAATAG+TGG | 0.583244 | 7:-75485636 | None:intergenic |
| CATTCCTTCAGTCACAAAGC+AGG | 0.586851 | 7:+75485769 | MsG0780040286.01.T01:CDS |
| TGGAATTGACCAATAACCAA+TGG | 0.593039 | 7:-75485709 | None:intergenic |
| AGTGCATTGGCAACACTATG+TGG | 0.597511 | 7:+75485522 | MsG0780040286.01.T01:CDS |
| ACACTATGTGGACAAGCATA+CGG | 0.598328 | 7:+75485534 | MsG0780040286.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAACTTATATTTATTACATG+TGG | + | Chr7:75485933-75485952 | MsG0780040286.01.T01:CDS | 20.0% |
| !! | TTATATTTATTACATGTGGT+TGG | + | Chr7:75485937-75485956 | MsG0780040286.01.T01:CDS | 20.0% |
| !!! | AATATAAGTTGACCAATATT+TGG | - | Chr7:75485924-75485943 | None:intergenic | 20.0% |
| ! | GAACATTATTATTGCATACT+TGG | + | Chr7:75485791-75485810 | MsG0780040286.01.T01:CDS | 25.0% |
| ! | GCAATAAAAGCAAACAAAAT+TGG | - | Chr7:75485732-75485751 | None:intergenic | 25.0% |
| ! | TAACAATGAAAATCAAGCTT+GGG | + | Chr7:75485856-75485875 | MsG0780040286.01.T01:CDS | 25.0% |
| ! | TGCAATGATTTCAATAAGTT+TGG | + | Chr7:75485887-75485906 | MsG0780040286.01.T01:CDS | 25.0% |
| ! | TTAACAATGAAAATCAAGCT+TGG | + | Chr7:75485855-75485874 | MsG0780040286.01.T01:CDS | 25.0% |
| !!! | ACTCCAATTTTAATTATCCT+AGG | + | Chr7:75485654-75485673 | MsG0780040286.01.T01:CDS | 25.0% |
| GAGTATATCTTCAAAGATCA+TGG | + | Chr7:75485580-75485599 | MsG0780040286.01.T01:CDS | 30.0% | |
| GCAAAAGAATATGGAATGAT+GGG | + | Chr7:75485558-75485577 | MsG0780040286.01.T01:CDS | 30.0% | |
| TGCAAAAGAATATGGAATGA+TGG | + | Chr7:75485557-75485576 | MsG0780040286.01.T01:CDS | 30.0% | |
| TGGCCTAGGATAATTAAAAT+TGG | - | Chr7:75485660-75485679 | None:intergenic | 30.0% | |
| ! | ACCAATATTTGGAATCCATA+AGG | - | Chr7:75485913-75485932 | None:intergenic | 30.0% |
| !! | TTTCAATAAGTTTGGCCTTA+TGG | + | Chr7:75485895-75485914 | MsG0780040286.01.T01:CDS | 30.0% |
| AAAATCAAGCTTGGGATTGT+TGG | + | Chr7:75485864-75485883 | MsG0780040286.01.T01:CDS | 35.0% | |
| CTGTTCATGTATTACTCTCT+TGG | + | Chr7:75485829-75485848 | MsG0780040286.01.T01:CDS | 35.0% | |
| GCCTTATGGATTCCAAATAT+TGG | + | Chr7:75485909-75485928 | MsG0780040286.01.T01:CDS | 35.0% | |
| TGGAATTGACCAATAACCAA+TGG | - | Chr7:75485712-75485731 | None:intergenic | 35.0% | |
| TTGTGACTGAAGGAATGTTT+GGG | - | Chr7:75485766-75485785 | None:intergenic | 35.0% | |
| TTTGTGACTGAAGGAATGTT+TGG | - | Chr7:75485767-75485786 | None:intergenic | 35.0% | |
| ACACTATGTGGACAAGCATA+CGG | + | Chr7:75485534-75485553 | MsG0780040286.01.T01:CDS | 40.0% | |
| CTTGTGCTATGGTTTCATCT+TGG | - | Chr7:75485680-75485699 | None:intergenic | 40.0% | |
| GAATGTTTGGGTAGTGAATG+AGG | - | Chr7:75485754-75485773 | None:intergenic | 40.0% | |
| GCATACGGTGCAAAAGAATA+TGG | + | Chr7:75485549-75485568 | MsG0780040286.01.T01:CDS | 40.0% | |
| GGAGTTGTGAAGATGAATAG+TGG | - | Chr7:75485639-75485658 | None:intergenic | 40.0% | |
| TGGTGTTCTGATACTTGGAA+AGG | + | Chr7:75485957-75485976 | MsG0780040286.01.T01:CDS | 40.0% | |
| ! | TAGCAGGAACCATTGGTTAT+TGG | + | Chr7:75485700-75485719 | MsG0780040286.01.T01:CDS | 40.0% |
| CATTCCTTCAGTCACAAAGC+AGG | + | Chr7:75485769-75485788 | MsG0780040286.01.T01:CDS | 45.0% | |
| CTATGGTTTCATCTTGGCCT+AGG | - | Chr7:75485674-75485693 | None:intergenic | 45.0% | |
| GAAACCATAGCACAAGTAGC+AGG | + | Chr7:75485684-75485703 | MsG0780040286.01.T01:CDS | 45.0% | |
| TGTTCCTGCTTTGTGACTGA+AGG | - | Chr7:75485776-75485795 | None:intergenic | 45.0% | |
| ! | AGTGCATTGGCAACACTATG+TGG | + | Chr7:75485522-75485541 | MsG0780040286.01.T01:CDS | 45.0% |
| ! | GTGGTTGGTGTTCTGATACT+TGG | + | Chr7:75485952-75485971 | MsG0780040286.01.T01:CDS | 45.0% |
| GCACAAGTAGCAGGAACCAT+TGG | + | Chr7:75485693-75485712 | MsG0780040286.01.T01:CDS | 50.0% | |
| ! | GGTTCCTGCTACTTGTGCTA+TGG | - | Chr7:75485691-75485710 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 75485516 | 75485992 | 75485516 | ID=MsG0780040286.01;Name=MsG0780040286.01 |
| Chr7 | mRNA | 75485516 | 75485992 | 75485516 | ID=MsG0780040286.01.T01;Parent=MsG0780040286.01;Name=MsG0780040286.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|158 |
| Chr7 | exon | 75485516 | 75485992 | 75485516 | ID=MsG0780040286.01.T01:exon:14375;Parent=MsG0780040286.01.T01 |
| Chr7 | CDS | 75485516 | 75485992 | 75485516 | ID=MsG0780040286.01.T01:cds;Parent=MsG0780040286.01.T01 |
| Gene Sequence |
| Protein sequence |
