AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011675.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011675.01.T01 MTR_3g008530 95.098 510 24 1 3 512 120 628 0.0 997
MsG0380011675.01.T01 MTR_4g101630 61.765 510 191 3 4 510 17 525 0.0 654
MsG0380011675.01.T01 MTR_4g101630 61.765 510 191 3 4 510 129 637 0.0 652
MsG0380011675.01.T01 MTR_8g017410 45.312 512 266 10 4 505 19 526 6.23e-148 434
MsG0380011675.01.T01 MTR_8g017410 45.312 512 266 10 4 505 65 572 1.95e-147 435
MsG0380011675.01.T01 MTR_7g105050 44.618 511 270 8 4 505 65 571 5.36e-145 428
MsG0380011675.01.T01 MTR_2g099950 45.155 516 269 9 2 507 60 571 6.32e-145 428
MsG0380011675.01.T01 MTR_1g059700 44.834 513 271 7 2 505 56 565 1.53e-144 427
MsG0380011675.01.T01 MTR_2g099950 45.276 508 264 9 10 507 5 508 1.84e-143 422
MsG0380011675.01.T01 MTR_1g015910 41.992 512 286 8 4 507 20 528 1.34e-137 408
MsG0380011675.01.T01 MTR_1g015910 42.330 515 280 9 4 507 63 571 7.87e-137 408
MsG0380011675.01.T01 MTR_1g015970 42.300 513 279 8 4 505 37 543 5.82e-131 392
MsG0380011675.01.T01 MTR_5g066380 40.152 528 285 12 4 507 53 573 1.87e-126 381
MsG0380011675.01.T01 MTR_1g015980 40.577 520 284 12 4 505 37 549 2.03e-124 375
MsG0380011675.01.T01 MTR_8g017410 50.289 346 166 4 4 345 65 408 1.29e-114 345
MsG0380011675.01.T01 MTR_1g015940 37.220 446 240 9 16 450 54 470 7.05e-89 281
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011675.01.T01 AT1G62660 60.928 517 190 5 4 510 123 637 0.0 656
MsG0380011675.01.T01 AT1G62660 60.928 517 190 5 4 510 25 539 0.0 655
MsG0380011675.01.T01 AT1G12240 59.653 518 196 5 4 510 138 653 0.0 642
MsG0380011675.01.T01 AT1G62660 59.197 473 181 5 48 510 1 471 0.0 570
MsG0380011675.01.T01 AT1G62660 59.197 473 181 5 48 510 1 471 0.0 570
MsG0380011675.01.T01 AT3G13790 44.231 520 273 9 2 507 64 580 2.14e-143 424
MsG0380011675.01.T01 AT1G55120 43.954 521 276 9 2 507 39 558 3.69e-143 424
MsG0380011675.01.T01 AT1G55120 44.038 520 275 9 3 507 16 534 4.05e-143 423
MsG0380011675.01.T01 AT3G13790 44.402 518 271 9 4 507 69 583 4.26e-143 424
MsG0380011675.01.T01 AT1G55120 44.123 519 274 9 4 507 16 533 5.03e-143 423
MsG0380011675.01.T01 AT1G55120 44.123 519 274 9 4 507 56 573 2.20e-142 422
MsG0380011675.01.T01 AT3G13790 44.186 516 271 9 6 507 1 513 3.80e-142 419
MsG0380011675.01.T01 AT3G13790 44.186 516 271 9 6 507 1 513 3.80e-142 419
MsG0380011675.01.T01 AT3G13790 44.186 516 271 9 6 507 1 513 3.80e-142 419
MsG0380011675.01.T01 AT3G52600 43.074 527 264 10 4 504 11 527 1.84e-140 416
MsG0380011675.01.T01 AT3G52600 43.074 527 264 10 4 504 65 581 1.01e-139 416
MsG0380011675.01.T01 AT3G52600 43.048 525 263 10 6 504 1 515 1.15e-139 413
MsG0380011675.01.T01 AT2G36190 42.857 518 275 9 4 503 67 581 1.26e-135 405
MsG0380011675.01.T01 AT5G11920 43.103 522 276 11 4 511 34 548 2.76e-135 403
MsG0380011675.01.T01 AT5G11920 43.077 520 275 11 6 511 1 513 1.02e-134 400
MsG0380011675.01.T01 AT3G13784 40.619 517 289 11 4 506 7 519 3.01e-127 381
MsG0380011675.01.T01 AT3G13784 40.462 519 291 11 2 506 55 569 2.38e-126 380
MsG0380011675.01.T01 AT3G13784 40.541 518 290 11 3 506 59 572 2.44e-126 380
MsG0380011675.01.T01 AT3G13784 40.619 517 289 11 4 506 60 572 3.09e-126 380
MsG0380011675.01.T01 AT5G11920 44.652 374 192 8 4 368 34 401 5.20e-101 310

Find 158 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATGAAGTTTCATATAAT+TGG 0.140432 3:+3347893 MsG0380011675.01.T01:five_prime_UTR
CTCTTACTAACATTTCTTTA+AGG 0.142299 3:+3347815 MsG0380011675.01.T01:five_prime_UTR
CTGATCCCCTTCTCCTTGAT+TGG 0.204499 3:+3351756 MsG0380011675.01.T01:CDS
TACCATTCATCCAATTCTTT+TGG 0.212787 3:-3347963 None:intergenic
CTGGAACTAATTTGCTTCTA+TGG 0.237185 3:+3352794 MsG0380011675.01.T01:CDS
ACAAGTTAAGCATGTGTTAA+AGG 0.239006 3:+3352075 MsG0380011675.01.T01:CDS
TGTGGGTATTGGGTTGCTTT+TGG 0.239422 3:+3352189 MsG0380011675.01.T01:CDS
TCTATAGATAGAAGTGCTTT+TGG 0.261113 3:+3353191 MsG0380011675.01.T01:CDS
GATTGTATTGGTAAAATAAA+TGG 0.262959 3:-3351505 None:intergenic
CGAAATCATAATGCTTTATA+CGG 0.273667 3:+3351679 MsG0380011675.01.T01:CDS
GCATGTGTTAAAGGCTAGTT+TGG 0.290947 3:+3352084 MsG0380011675.01.T01:CDS
TTAGAGAGGCGGAAATAAAT+TGG 0.294265 3:-3353263 None:intergenic
TGGTGTCCTTCACTTTGATT+TGG 0.294475 3:+3354632 MsG0380011675.01.T01:three_prime_UTR
TTGTCAAATAGCACTGTTCT+TGG 0.309976 3:-3352766 None:intergenic
AAGGTTATCTTTGTGACATT+TGG 0.310485 3:+3347706 MsG0380011675.01.T01:five_prime_UTR
GGAAAATGGAGAGTCCTTAT+TGG 0.330441 3:+3351872 MsG0380011675.01.T01:CDS
TAACTACTTACATGCGGTTC+CGG 0.333605 3:+3351970 MsG0380011675.01.T01:CDS
TTTGTTTGCTTTCCAGCAAT+GGG 0.335871 3:-3347675 None:intergenic
GGTTTGGACACATCAGTAAA+TGG 0.337370 3:+3352049 MsG0380011675.01.T01:CDS
TTTACAACTCTCACATTCAT+TGG 0.337997 3:-3354732 None:intergenic
TGCTCTACACACCCCATTGC+TGG 0.342989 3:+3347663 MsG0380011675.01.T01:five_prime_UTR
AAAAGGTTGGGCATCTCTTC+AGG 0.343027 3:+3352318 MsG0380011675.01.T01:CDS
ACTTTCAACCCCAAAAGAAT+TGG 0.346242 3:+3347953 MsG0380011675.01.T01:five_prime_UTR
AATAAACGGGTCAAATGGTT+TGG 0.347159 3:+3352033 MsG0380011675.01.T01:CDS
CACTAGAGGATGTGGGTATT+GGG 0.353381 3:+3352179 MsG0380011675.01.T01:CDS
GGTGTCCTTCACTTTGATTT+GGG 0.353772 3:+3354633 MsG0380011675.01.T01:three_prime_UTR
GGATCGGGCCAGATGGAAAA+TGG 0.363734 3:+3351858 MsG0380011675.01.T01:CDS
CTTAAAGAAATGTTAGTAAG+AGG 0.364144 3:-3347814 None:intergenic
CTGTATGGGGCAACATTTCA+TGG 0.366572 3:+3351537 MsG0380011675.01.T01:CDS
GAAAGTGATGACTTGGAAAA+AGG 0.367320 3:+3352301 MsG0380011675.01.T01:CDS
TTCAAAATTTATGAAATTTG+TGG 0.368325 3:-3351939 None:intergenic
TGATCCCCTTCTCCTTGATT+GGG 0.368754 3:+3351757 MsG0380011675.01.T01:CDS
TGAATTTGAGATTGAATCAT+TGG 0.373575 3:+3353121 MsG0380011675.01.T01:CDS
CCACTAGAGGATGTGGGTAT+TGG 0.374683 3:+3352178 MsG0380011675.01.T01:CDS
TACCCAACAGAAGCAATATA+TGG 0.376551 3:+3354433 MsG0380011675.01.T01:CDS
GTTCAAATGCCAAATCTTGA+TGG 0.377231 3:-3354509 None:intergenic
TCAAAGTCTCCATCAAGATT+TGG 0.384584 3:+3354500 MsG0380011675.01.T01:CDS
TGTCATTGACTTTGATCAAA+AGG 0.384608 3:-3354554 None:intergenic
ACATCCTCTAGTGGGTTATC+AGG 0.385034 3:-3352169 None:intergenic
TTTGACCCGTTTATTGAAAC+CGG 0.387366 3:-3352025 None:intergenic
ACAATCCTGATTCAGCTGTA+TGG 0.390579 3:+3351522 MsG0380011675.01.T01:CDS
AACTACTTACATGCGGTTCC+GGG 0.398556 3:+3351971 MsG0380011675.01.T01:CDS
GGAACTTTGCTACCACAAAC+TGG 0.402156 3:-3353977 None:intergenic
ATATTGCATTGTATGATTGC+AGG 0.408071 3:+3351458 MsG0380011675.01.T01:intron
AGCATTATGATTTCGCCATC+TGG 0.408188 3:-3351671 None:intergenic
AGTACATCGCTGTTCTTACT+TGG 0.411235 3:+3354793 MsG0380011675.01.T01:three_prime_UTR
TTGCCCCATACAGCTGAATC+AGG 0.421776 3:-3351527 None:intergenic
CGGTTCCGGGTACGGGTATG+TGG 0.425826 3:+3351984 MsG0380011675.01.T01:CDS
TTACATGCGGTTCCGGGTAC+GGG 0.426530 3:+3351977 MsG0380011675.01.T01:CDS
AAATGAAGCTCATAAATTGT+TGG 0.426828 3:+3354589 MsG0380011675.01.T01:three_prime_UTR
CTTACATGCGGTTCCGGGTA+CGG 0.432880 3:+3351976 MsG0380011675.01.T01:CDS
TATCAAAGGACATGATTCAT+TGG 0.436036 3:+3351570 MsG0380011675.01.T01:CDS
CAATCCTGATTCAGCTGTAT+GGG 0.436296 3:+3351523 MsG0380011675.01.T01:CDS
GCTCCATATATTGCTTCTGT+TGG 0.438108 3:-3354436 None:intergenic
AGAGTGGATAGTTATGCAAT+TGG 0.438871 3:+3352115 MsG0380011675.01.T01:CDS
TTCCTAGAGGGGTTGCTCAA+GGG 0.439592 3:+3347845 MsG0380011675.01.T01:five_prime_UTR
ATGGTTATTATTTGAAGGAC+TGG 0.440167 3:-3347641 None:intergenic
TTTACCCGGTTTCAATAAAC+GGG 0.441993 3:+3352020 MsG0380011675.01.T01:CDS
CGCCTCTCTAATACTAGTCT+TGG 0.442211 3:+3353275 MsG0380011675.01.T01:CDS
TGGCAAAAGCGTTGCGGACC+CGG 0.442680 3:-3351651 None:intergenic
ATCCAACCACTGGTTGGATC+GGG 0.444877 3:+3351843 MsG0380011675.01.T01:CDS
CCCATCTGGCATTGGTTCAA+AGG 0.446762 3:+3351811 MsG0380011675.01.T01:CDS
GTCATTGACTTTGATCAAAA+GGG 0.446937 3:-3354553 None:intergenic
TTGCACTTGCACGTAGTTGT+CGG 0.448664 3:-3351708 None:intergenic
TTGCATATTTAACCCAATCA+AGG 0.450893 3:-3351769 None:intergenic
GGTTCGATATCAACGGTGTA+TGG 0.454622 3:+3351627 MsG0380011675.01.T01:CDS
GACAATATAGATTGTGGAAG+AGG 0.455337 3:+3353167 MsG0380011675.01.T01:CDS
TCCTAGAGGGGTTGCTCAAG+GGG 0.455725 3:+3347846 MsG0380011675.01.T01:five_prime_UTR
AAAATTATCAATGAGGGTCT+TGG 0.456340 3:+3354015 MsG0380011675.01.T01:CDS
GTTTCAATAAACGGGTCAAA+TGG 0.458831 3:+3352028 MsG0380011675.01.T01:CDS
GATCCAACCACTGGTTGGAT+CGG 0.459335 3:+3351842 MsG0380011675.01.T01:CDS
AGAGCATGGTTATTATTTGA+AGG 0.460310 3:-3347646 None:intergenic
TGAATCATCCTTCACCTAGT+TGG 0.465827 3:+3354612 MsG0380011675.01.T01:three_prime_UTR
CCCCAAAAGAATTGGATGAA+TGG 0.466741 3:+3347961 MsG0380011675.01.T01:exon
CTCCATATATTGCTTCTGTT+GGG 0.471332 3:-3354435 None:intergenic
GTTGCTTGACTAATGTTCAA+TGG 0.475692 3:-3352895 None:intergenic
CCTTTGAACCAATGCCAGAT+GGG 0.478014 3:-3351811 None:intergenic
TTGTCAGGTTCCATGGCAAT+GGG 0.479303 3:-3351602 None:intergenic
GACTTTGATCAAAAGGGAAA+GGG 0.479958 3:-3354547 None:intergenic
TTGATATCGAACCATTTGTC+AGG 0.481939 3:-3351617 None:intergenic
AGGGTCTACAACAAGTATAT+TGG 0.484304 3:+3354706 MsG0380011675.01.T01:three_prime_UTR
AAGCTCTCTACTTCTTCTAC+AGG 0.485133 3:-3352817 None:intergenic
GAGAAGGGGATCAGATAAGT+TGG 0.488463 3:-3351747 None:intergenic
TTTGTCAGGTTCCATGGCAA+TGG 0.489351 3:-3351603 None:intergenic
TGCAGGTCCATTGTTTCACA+TGG 0.495358 3:+3351475 MsG0380011675.01.T01:CDS
ATATGCAAATAACCCAATCA+TGG 0.496246 3:+3351784 MsG0380011675.01.T01:CDS
TTCAATGGAACAACAGAGCC+AGG 0.497214 3:-3352880 None:intergenic
GAACCATTTGTCAGGTTCCA+TGG 0.500299 3:-3351609 None:intergenic
TGATAACCCACTAGAGGATG+TGG 0.503894 3:+3352171 MsG0380011675.01.T01:CDS
CAAAGCTCTCAATAATTGAA+TGG 0.505751 3:-3354375 None:intergenic
AGAAATTTCAATGTTCTCCA+AGG 0.507052 3:-3347791 None:intergenic
GAGTGGATAGTTATGCAATT+GGG 0.507560 3:+3352116 MsG0380011675.01.T01:CDS
GATATCAACGGTGTATGGAC+CGG 0.513825 3:+3351632 MsG0380011675.01.T01:CDS
TTTCCTAGAGGGGTTGCTCA+AGG 0.515143 3:+3347844 MsG0380011675.01.T01:five_prime_UTR
ACAACTCTCACATTCATTGG+AGG 0.520738 3:-3354729 None:intergenic
CAAAGTGAAGGACACCAACT+AGG 0.520993 3:-3354626 None:intergenic
TGACTTTGATCAAAAGGGAA+AGG 0.527635 3:-3354548 None:intergenic
TACGGGTATGTGGGAATGTG+TGG 0.530308 3:+3351994 MsG0380011675.01.T01:CDS
TTGCCATGGAACCTGACAAA+TGG 0.532183 3:+3351606 MsG0380011675.01.T01:CDS
ACCCCTTGAGCAACCCCTCT+AGG 0.532858 3:-3347847 None:intergenic
GTGCTATTTGACAAGAAGAC+TGG 0.533769 3:+3352775 MsG0380011675.01.T01:CDS
ATGATGAGATGGATTTGACT+TGG 0.536216 3:-3347875 None:intergenic
TATGAAACTTCATGATGAGA+TGG 0.536560 3:-3347886 None:intergenic
TGATACTGAAAGTGATGACT+TGG 0.537404 3:+3352294 MsG0380011675.01.T01:CDS
CAGCTGAATCAGGATTGTAT+TGG 0.537964 3:-3351517 None:intergenic
TCCTTTGAACCAATGCCAGA+TGG 0.537975 3:-3351812 None:intergenic
ATTTAACCCAATCAAGGAGA+AGG 0.540671 3:-3351763 None:intergenic
TTTAACCCAATCAAGGAGAA+GGG 0.543585 3:-3351762 None:intergenic
TGTATGGGGCAACATTTCAT+GGG 0.549693 3:+3351538 MsG0380011675.01.T01:CDS
TCCGTGATCCAACCACTGGT+TGG 0.551226 3:+3351837 MsG0380011675.01.T01:CDS
GGCCCGATCCAACCAGTGGT+TGG 0.551925 3:-3351845 None:intergenic
TTTAACACATGCTTAACTTG+TGG 0.557906 3:-3352073 None:intergenic
GATTTCCGTGATCCAACCAC+TGG 0.560137 3:+3351833 MsG0380011675.01.T01:CDS
AGGGGATCAGATAAGTTGGC+AGG 0.560256 3:-3351743 None:intergenic
TGTTTGGTGCAGATCATCAA+AGG 0.560317 3:+3353937 MsG0380011675.01.T01:intron
GCTCTACCTTCCCATTGCCA+TGG 0.560952 3:+3351592 MsG0380011675.01.T01:CDS
GTCCATTGTTTCACATGGGA+TGG 0.561254 3:+3351480 MsG0380011675.01.T01:CDS
ATGGGGTCATGCTGTATCAA+AGG 0.565811 3:+3351556 MsG0380011675.01.T01:CDS
AGCAATGACAATATAGATTG+TGG 0.569767 3:+3353161 MsG0380011675.01.T01:CDS
AAAATCCCAAATCAAAGTGA+AGG 0.570790 3:-3354638 None:intergenic
ACTGGTTGGATCGGGCCAGA+TGG 0.571309 3:+3351851 MsG0380011675.01.T01:CDS
GAAATCATAATGCTTTATAC+GGG 0.576553 3:+3351680 MsG0380011675.01.T01:CDS
TACCATCCCATGTGAAACAA+TGG 0.577288 3:-3351482 None:intergenic
GAAGAAGTGGTGGTTACACC+TGG 0.577537 3:+3352862 MsG0380011675.01.T01:CDS
TTGACCCGTTTATTGAAACC+GGG 0.578552 3:-3352024 None:intergenic
TCCAACCAGTGGTTGGATCA+CGG 0.579181 3:-3351838 None:intergenic
CATTCCCACATACCCGTACC+CGG 0.580324 3:-3351989 None:intergenic
GGTTCCGGGTACGGGTATGT+GGG 0.580945 3:+3351985 MsG0380011675.01.T01:CDS
GCAATTGCTAGAATGCCAAA+TGG 0.584073 3:-3353215 None:intergenic
CTTTGAACCAATGCCAGATG+GGG 0.585216 3:-3351810 None:intergenic
CCAATACCCACATCCTCTAG+TGG 0.587715 3:-3352178 None:intergenic
AAATGACATTAGAAATACAA+TGG 0.597705 3:-3347731 None:intergenic
ATATCAACGGTGTATGGACC+GGG 0.597914 3:+3351633 MsG0380011675.01.T01:CDS
ATTATTGAGAGCTTTGCTCA+AGG 0.599784 3:+3354382 MsG0380011675.01.T01:CDS
GAACATTAGTCAAGCAACAC+AGG 0.602445 3:+3352900 MsG0380011675.01.T01:CDS
ATCTGGCCCGATCCAACCAG+TGG 0.607994 3:-3351849 None:intergenic
GCCATCTGGCAAAAGCGTTG+CGG 0.609159 3:-3351657 None:intergenic
TTAACCCAATCAAGGAGAAG+GGG 0.624987 3:-3351761 None:intergenic
TTGTTTGCTTTCCAGCAATG+GGG 0.630944 3:-3347674 None:intergenic
GACAAATGGTTCGATATCAA+CGG 0.631213 3:+3351620 MsG0380011675.01.T01:CDS
GCAGGTCCATTGTTTCACAT+GGG 0.631895 3:+3351476 MsG0380011675.01.T01:CDS
CAGGTTCCATGGCAATGGGA+AGG 0.634233 3:-3351598 None:intergenic
CAAGACTAGTATTAGAGAGG+CGG 0.639296 3:-3353274 None:intergenic
GCAATGGGGTGTGTAGAGCA+TGG 0.640697 3:-3347660 None:intergenic
GAAGGACACCAACTAGGTGA+AGG 0.645746 3:-3354620 None:intergenic
CAGTGATGAATATGAAGAAG+TGG 0.646140 3:+3352849 MsG0380011675.01.T01:CDS
AATCCTGATTCAGCTGTATG+GGG 0.647899 3:+3351524 MsG0380011675.01.T01:CDS
CAATACCCACATCCTCTAGT+GGG 0.649026 3:-3352177 None:intergenic
TTACGAGTACAAATCATACT+CGG 0.653215 3:-3354765 None:intergenic
TACCAAGACTAGTATTAGAG+AGG 0.656494 3:-3353277 None:intergenic
AAATGATAACTACTTACATG+CGG 0.658777 3:+3351964 MsG0380011675.01.T01:CDS
TTTGAACCAATGCCAGATGG+GGG 0.662920 3:-3351809 None:intergenic
GGTTCCTGATAACCCACTAG+AGG 0.670392 3:+3352165 MsG0380011675.01.T01:CDS
GATAACCCACTAGAGGATGT+GGG 0.675334 3:+3352172 MsG0380011675.01.T01:CDS
ATTGAGAGCTTTGCTCAAGG+AGG 0.675715 3:+3354385 MsG0380011675.01.T01:CDS
TGATGAATATGAAGAAGTGG+TGG 0.685170 3:+3352852 MsG0380011675.01.T01:CDS
TAGTTTGGATGATACAAGAG+TGG 0.691956 3:+3352099 MsG0380011675.01.T01:CDS
GTATGGGGCAACATTTCATG+GGG 0.697118 3:+3351539 MsG0380011675.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAGAAAATACAAAAT+TGG - Chr3:3348492-3348511 None:intergenic 10.0%
!! AACAAAAAAATAAAAAATGA+AGG + Chr3:3347618-3347637 MsG0380011675.01.T01:five_prime_UTR 10.0%
!! ATCAAAAATAAGAAATTTAT+TGG - Chr3:3353005-3353024 None:intergenic 10.0%
!!! AAAAGATATTTTCATTATTT+AGG + Chr3:3350954-3350973 MsG0380011675.01.T01:intron 10.0%
!!! AAATTTTTTAAAAATCACAA+GGG + Chr3:3354687-3354706 MsG0380011675.01.T01:three_prime_UTR 10.0%
!!! AAGAAAAAAATATAACTTTT+AGG + Chr3:3353614-3353633 MsG0380011675.01.T01:intron 10.0%
!!! AATTTTGTATTTTCTTTATT+TGG + Chr3:3348491-3348510 MsG0380011675.01.T01:intron 10.0%
!!! ATAATGAAAATATCTTTTTA+TGG - Chr3:3350952-3350971 None:intergenic 10.0%
!!! GTAATTATTAAATTTTGTAA+AGG + Chr3:3352344-3352363 MsG0380011675.01.T01:intron 10.0%
!!! GTGATTTTTAAAAAATTTAA+GGG - Chr3:3354685-3354704 None:intergenic 10.0%
!!! TAAATTTTTTAAAAATCACA+AGG + Chr3:3354686-3354705 MsG0380011675.01.T01:three_prime_UTR 10.0%
!!! TGTGATTTTTAAAAAATTTA+AGG - Chr3:3354686-3354705 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - Chr3:3349649-3349668 None:intergenic 100.0%
!! AAGTGAACAAAAAAATAATT+AGG - Chr3:3351394-3351413 None:intergenic 15.0%
!! ACATATCAATTATTAATTGA+TGG - Chr3:3349462-3349481 None:intergenic 15.0%
!! ACTACAAATTAATATTACTT+AGG - Chr3:3351336-3351355 None:intergenic 15.0%
!! AGACTAAAACTAATTTAAAT+TGG + Chr3:3354328-3354347 MsG0380011675.01.T01:intron 15.0%
!! CATGAAATGAAAAAAATTAA+AGG - Chr3:3351307-3351326 None:intergenic 15.0%
!! CTATATATTATCGAAAATTT+AGG - Chr3:3351159-3351178 None:intergenic 15.0%
!! CTGCAAAAAAATTAAAAAAA+AGG - Chr3:3353087-3353106 None:intergenic 15.0%
!! CTTAAAAAAATGATATATGT+GGG + Chr3:3350737-3350756 MsG0380011675.01.T01:intron 15.0%
!! CTTTAAATTTGATGAAAAAA+AGG - Chr3:3348342-3348361 None:intergenic 15.0%
!! TATATTAAATAAAGATGTGA+CGG + Chr3:3353493-3353512 MsG0380011675.01.T01:intron 15.0%
!! TTCAAAATTTATGAAATTTG+TGG - Chr3:3351942-3351961 None:intergenic 15.0%
!! TTGTAACATATTAATCAAAA+TGG + Chr3:3353431-3353450 MsG0380011675.01.T01:intron 15.0%
!! TTTAACATGTGTATAAAAAA+AGG - Chr3:3348206-3348225 None:intergenic 15.0%
!!! ATTAAATGAAATTGATTCTA+TGG + Chr3:3348695-3348714 MsG0380011675.01.T01:intron 15.0%
!!! ATTCTCTTTTATTTTTCTTT+TGG - Chr3:3351245-3351264 None:intergenic 15.0%
!!! ATTTTATTGAAAATGATACA+TGG + Chr3:3352143-3352162 MsG0380011675.01.T01:CDS 15.0%
!!! CTTCTTGTTTTTTTTTTTTT+GGG - Chr3:3350663-3350682 None:intergenic 15.0%
!!! GATACAATTATAATTTTGTT+TGG + Chr3:3353550-3353569 MsG0380011675.01.T01:intron 15.0%
!!! TAAACCAAGATTTTAAAAAA+CGG + Chr3:3354182-3354201 MsG0380011675.01.T01:intron 15.0%
!!! TAAGATAATTTTGTTTTCTA+TGG + Chr3:3348006-3348025 MsG0380011675.01.T01:intron 15.0%
!!! TAATAGAATTTTTAATCACA+TGG - Chr3:3349060-3349079 None:intergenic 15.0%
!!! TCTTCTTGTTTTTTTTTTTT+TGG - Chr3:3350664-3350683 None:intergenic 15.0%
!!! TGCTTTTTTTTTTTGTTTTA+AGG + Chr3:3352967-3352986 MsG0380011675.01.T01:intron 15.0%
!!! TGTCAATTTATTTTACTTTT+TGG - Chr3:3351428-3351447 None:intergenic 15.0%
!!! TTCTTGTTTTTTTTTTTTTG+GGG - Chr3:3350662-3350681 None:intergenic 15.0%
!!! TTTCAAAAGCTTTTTTTTTT+TGG + Chr3:3348080-3348099 MsG0380011675.01.T01:intron 15.0%
!!! TTTCTATTGATTATCATAAT+TGG - Chr3:3348955-3348974 None:intergenic 15.0%
!!! TTTTATTGAAAATGATACAT+GGG + Chr3:3352144-3352163 MsG0380011675.01.T01:CDS 15.0%
!!! TTTTTTAATTTTTTTGCAGT+TGG + Chr3:3353088-3353107 MsG0380011675.01.T01:intron 15.0%
!! AAAAAAAAACAAGAAGAAGA+AGG + Chr3:3350667-3350686 MsG0380011675.01.T01:intron 20.0%
!! AAATGACATTAGAAATACAA+TGG - Chr3:3347734-3347753 None:intergenic 20.0%
!! AAGCCCAAATAAATATTATT+TGG + Chr3:3351205-3351224 MsG0380011675.01.T01:intron 20.0%
!! AATATAGAATCAACTAACAT+TGG - Chr3:3348747-3348766 None:intergenic 20.0%
!! AATTTAGAGAAAATCTTTCA+TGG - Chr3:3351364-3351383 None:intergenic 20.0%
!! AGCAAAATAGAGATTAAAAT+TGG + Chr3:3352492-3352511 MsG0380011675.01.T01:intron 20.0%
!! AGCCCAAATAAATATTATTT+GGG + Chr3:3351206-3351225 MsG0380011675.01.T01:intron 20.0%
!! ATATAGAATCAACTAACATT+GGG - Chr3:3348746-3348765 None:intergenic 20.0%
!! ATCATGAAGTTTCATATAAT+TGG + Chr3:3347893-3347912 MsG0380011675.01.T01:five_prime_UTR 20.0%
!! ATCATGTAAAAAAAATCATG+TGG + Chr3:3351044-3351063 MsG0380011675.01.T01:intron 20.0%
!! ATTCGAAAGAAATGAATTAT+TGG + Chr3:3349428-3349447 MsG0380011675.01.T01:intron 20.0%
!! CAACTAAGGTTAATTTATTT+AGG - Chr3:3349338-3349357 None:intergenic 20.0%
!! CCTTAAAAAAATGATATATG+TGG + Chr3:3350736-3350755 MsG0380011675.01.T01:intron 20.0%
!! TGATGAAAAATTATCAATGA+GGG + Chr3:3354009-3354028 MsG0380011675.01.T01:CDS 20.0%
!! TGCCCAAATAATATTTATTT+GGG - Chr3:3351211-3351230 None:intergenic 20.0%
!! TTAATTGTTACATACATCAT+GGG - Chr3:3349600-3349619 None:intergenic 20.0%
!! TTACCTAAGGATTAAATTAA+TGG + Chr3:3353742-3353761 MsG0380011675.01.T01:intron 20.0%
!!! AAAAAAAGAAGGATTTTGTT+GGG + Chr3:3352256-3352275 MsG0380011675.01.T01:CDS 20.0%
!!! AAAAGCTTTTTTTTTTTGGA+GGG + Chr3:3348084-3348103 MsG0380011675.01.T01:intron 20.0%
!!! AAATATTTTGCAATGCATTT+CGG - Chr3:3352696-3352715 None:intergenic 20.0%
!!! AGCTTTTTAAAATAGATTCA+AGG + Chr3:3350691-3350710 MsG0380011675.01.T01:intron 20.0%
!!! AGTTGAATAAATTTTTATGC+AGG - Chr3:3352421-3352440 None:intergenic 20.0%
!!! ATGTATCTAAACTCAATTTT+TGG - Chr3:3351125-3351144 None:intergenic 20.0%
!!! ATTGCTAATTTGTAAAAGTT+AGG - Chr3:3353398-3353417 None:intergenic 20.0%
!!! CATTTCTTTCGAATTTTATT+TGG - Chr3:3349422-3349441 None:intergenic 20.0%
!!! CCACATATATCATTTTTTTA+AGG - Chr3:3350739-3350758 None:intergenic 20.0%
!!! GACATGTAATTTTTCTTTTT+CGG - Chr3:3348902-3348921 None:intergenic 20.0%
!!! GATTGTATTGGTAAAATAAA+TGG - Chr3:3351508-3351527 None:intergenic 20.0%
!!! GGAATTTTTTTAATGAAGTT+GGG - Chr3:3350931-3350950 None:intergenic 20.0%
!!! GTTGAATAAATTTTTATGCA+GGG - Chr3:3352420-3352439 None:intergenic 20.0%
!!! TCTTGTTTTTTTTTTTTTGG+GGG - Chr3:3350661-3350680 None:intergenic 20.0%
!!! TGGAATTTTTTTAATGAAGT+TGG - Chr3:3350932-3350951 None:intergenic 20.0%
!!! TTCATCGTTATAATTTTGTT+TGG - Chr3:3353646-3353665 None:intergenic 20.0%
!!! TTGATTTGGGATTTTTTTTT+TGG + Chr3:3354646-3354665 MsG0380011675.01.T01:three_prime_UTR 20.0%
!!! TTGCTAATTTGTAAAAGTTA+GGG - Chr3:3353397-3353416 None:intergenic 20.0%
! AAAAATTGTTACAACAACTG+GGG - Chr3:3349670-3349689 None:intergenic 25.0%
! AAATGAAGCTCATAAATTGT+TGG + Chr3:3354589-3354608 MsG0380011675.01.T01:three_prime_UTR 25.0%
! AAATGATAACTACTTACATG+CGG + Chr3:3351964-3351983 MsG0380011675.01.T01:CDS 25.0%
! AAATTATTTAGTCACATCGA+TGG - Chr3:3351283-3351302 None:intergenic 25.0%
! AAATTGGACAAAATTTGTGT+TGG + Chr3:3352508-3352527 MsG0380011675.01.T01:intron 25.0%
! AAGCAAACAAAAATCATCAA+AGG + Chr3:3347687-3347706 MsG0380011675.01.T01:five_prime_UTR 25.0%
! AATTATTTAGTCACATCGAT+GGG - Chr3:3351282-3351301 None:intergenic 25.0%
! AGACTCTATTTGTTTAAGTA+AGG - Chr3:3350583-3350602 None:intergenic 25.0%
! ATGATCAAGTGAAAAAAAGA+AGG + Chr3:3352245-3352264 MsG0380011675.01.T01:CDS 25.0%
! ATTTGGACTTATAGTGAATT+TGG + Chr3:3348246-3348265 MsG0380011675.01.T01:intron 25.0%
! CATCCATTAATTTAATCCTT+AGG - Chr3:3353748-3353767 None:intergenic 25.0%
! CGAAATCATAATGCTTTATA+CGG + Chr3:3351679-3351698 MsG0380011675.01.T01:CDS 25.0%
! CTAAGGATTAAATTAATGGA+TGG + Chr3:3353746-3353765 MsG0380011675.01.T01:intron 25.0%
! CTAGTTTAAGGAATCAAATA+TGG - Chr3:3348156-3348175 None:intergenic 25.0%
! CTCTTACTAACATTTCTTTA+AGG + Chr3:3347815-3347834 MsG0380011675.01.T01:five_prime_UTR 25.0%
! CTTAAAGAAATGTTAGTAAG+AGG - Chr3:3347817-3347836 None:intergenic 25.0%
! CTTATTGGATCAAAAAAGAA+AGG + Chr3:3351887-3351906 MsG0380011675.01.T01:CDS 25.0%
! CTTTACTAGATAAATGATGT+TGG - Chr3:3350523-3350542 None:intergenic 25.0%
! GAAAAATTGTTACAACAACT+GGG - Chr3:3349038-3349057 None:intergenic 25.0%
! GAAATCATAATGCTTTATAC+GGG + Chr3:3351680-3351699 MsG0380011675.01.T01:CDS 25.0%
! GAAATGCATTGCAAAATATT+TGG + Chr3:3352695-3352714 MsG0380011675.01.T01:intron 25.0%
! GACTTATTGTTACAATTTCA+TGG + Chr3:3353838-3353857 MsG0380011675.01.T01:intron 25.0%
! GATCACTATTACATTTAATG+CGG - Chr3:3349107-3349126 None:intergenic 25.0%
! GTGATGAAAAATTATCAATG+AGG + Chr3:3354008-3354027 MsG0380011675.01.T01:CDS 25.0%
! GTGCCCAAATAATATTTATT+TGG - Chr3:3351212-3351231 None:intergenic 25.0%
! GTTAATTGTTACATACATCA+TGG - Chr3:3349601-3349620 None:intergenic 25.0%
! TACAAACTGCGTTAAATTTA+TGG - Chr3:3352590-3352609 None:intergenic 25.0%
! TAGCAAATACAAATTCTTAC+AGG - Chr3:3353881-3353900 None:intergenic 25.0%
! TCAAAATGTCTTTCATTGAA+TGG + Chr3:3348409-3348428 MsG0380011675.01.T01:intron 25.0%
! TTTAATCTCTTTCAATGTCT+AGG - Chr3:3348929-3348948 None:intergenic 25.0%
!! AAATTAAGCTCTTCTCTTTT+TGG - Chr3:3349010-3349029 None:intergenic 25.0%
!! AATTTTTCATCACTGAAAAC+TGG - Chr3:3354001-3354020 None:intergenic 25.0%
!! ACAAATTTCTTTTGTGTTGA+TGG + Chr3:3353305-3353324 MsG0380011675.01.T01:CDS 25.0%
!! AGAAGAGCTTAATTTTGTAT+AGG + Chr3:3349015-3349034 MsG0380011675.01.T01:intron 25.0%
!! AGTTAAATCTACGACTTTTT+GGG - Chr3:3350847-3350866 None:intergenic 25.0%
!! ATGAAATTGATTCTATGGTA+AGG + Chr3:3348700-3348719 MsG0380011675.01.T01:intron 25.0%
!! ATTTTGTAAAGGGTTCAATA+TGG + Chr3:3352355-3352374 MsG0380011675.01.T01:intron 25.0%
!! CTATTGATTATCATAATTGG+TGG - Chr3:3348952-3348971 None:intergenic 25.0%
!! GAAAAAAAGAAGGATTTTGT+TGG + Chr3:3352255-3352274 MsG0380011675.01.T01:CDS 25.0%
!! GTTTGTTTGATGATAATTTG+TGG - Chr3:3350347-3350366 None:intergenic 25.0%
!! TAAGGAAAATTTTTCCTAGA+GGG + Chr3:3347833-3347852 MsG0380011675.01.T01:five_prime_UTR 25.0%
!! TGAATTTGAGATTGAATCAT+TGG + Chr3:3353121-3353140 MsG0380011675.01.T01:CDS 25.0%
!! TTAAGGAAAATTTTTCCTAG+AGG + Chr3:3347832-3347851 MsG0380011675.01.T01:five_prime_UTR 25.0%
!! TTCAACACACTCTATTTTAT+TGG + Chr3:3350996-3351015 MsG0380011675.01.T01:intron 25.0%
!!! CAAAAGCTTTTTTTTTTTGG+AGG + Chr3:3348083-3348102 MsG0380011675.01.T01:intron 25.0%
!!! CAAACCGTTTTTTAAAATCT+TGG - Chr3:3354189-3354208 None:intergenic 25.0%
!!! CTTGTTTTTTTTTTTTTGGG+GGG - Chr3:3350660-3350679 None:intergenic 25.0%
!!! CTTTCTTTTTTGATCCAATA+AGG - Chr3:3351889-3351908 None:intergenic 25.0%
!!! GACATTTTGACAAAATATGA+TGG - Chr3:3348399-3348418 None:intergenic 25.0%
!!! TTGTTTTTTTTTTTTTGGGG+GGG - Chr3:3350659-3350678 None:intergenic 25.0%
!!! TTTGTAACTTTCTTTTTCAG+TGG + Chr3:3348641-3348660 MsG0380011675.01.T01:intron 25.0%
AAAAAGATAAACATACCGCT+GGG - Chr3:3348620-3348639 None:intergenic 30.0%
AAAATCCCAAATCAAAGTGA+AGG - Chr3:3354641-3354660 None:intergenic 30.0%
AAAATTATCAATGAGGGTCT+TGG + Chr3:3354015-3354034 MsG0380011675.01.T01:CDS 30.0%
AAAATTGTTACAACAACTGG+GGG - Chr3:3349669-3349688 None:intergenic 30.0%
AACAAGATACCAGATATTGT+CGG + Chr3:3349221-3349240 MsG0380011675.01.T01:intron 30.0%
AAGGAAATGAATGATATGTG+TGG + Chr3:3350710-3350729 MsG0380011675.01.T01:intron 30.0%
AAGGTTATCTTTGTGACATT+TGG + Chr3:3347706-3347725 MsG0380011675.01.T01:five_prime_UTR 30.0%
AATGTCTTTCATTGAATGGT+AGG + Chr3:3348413-3348432 MsG0380011675.01.T01:intron 30.0%
ACAAGTTAAGCATGTGTTAA+AGG + Chr3:3352075-3352094 MsG0380011675.01.T01:CDS 30.0%
ACAATATCTGGTATCTTGTT+CGG - Chr3:3349221-3349240 None:intergenic 30.0%
AGAAATTTCAATGTTCTCCA+AGG - Chr3:3347794-3347813 None:intergenic 30.0%
AGAGCATGGTTATTATTTGA+AGG - Chr3:3347649-3347668 None:intergenic 30.0%
AGCAATGACAATATAGATTG+TGG + Chr3:3353161-3353180 MsG0380011675.01.T01:CDS 30.0%
AGGAAATGAATGATATGTGT+GGG + Chr3:3350711-3350730 MsG0380011675.01.T01:intron 30.0%
AGTAATTGCAACCCAAAAAT+AGG + Chr3:3349244-3349263 MsG0380011675.01.T01:intron 30.0%
ATATGCAAATAACCCAATCA+TGG + Chr3:3351784-3351803 MsG0380011675.01.T01:CDS 30.0%
ATATTGCATTGTATGATTGC+AGG + Chr3:3351458-3351477 MsG0380011675.01.T01:intron 30.0%
ATGGTTATTATTTGAAGGAC+TGG - Chr3:3347644-3347663 None:intergenic 30.0%
ATTCCTTAAACTAGTAACTC+AGG + Chr3:3348162-3348181 MsG0380011675.01.T01:intron 30.0%
CAAAGCTCTCAATAATTGAA+TGG - Chr3:3354378-3354397 None:intergenic 30.0%
CTAACTATATAGCCTTTAAC+AGG + Chr3:3349486-3349505 MsG0380011675.01.T01:intron 30.0%
CTAATGTAGATATAGAGGAT+GGG - Chr3:3350497-3350516 None:intergenic 30.0%
GATGTACTTTCAAATATGTC+TGG - Chr3:3352661-3352680 None:intergenic 30.0%
GGAAAAATTGTTACAACAAC+TGG - Chr3:3349039-3349058 None:intergenic 30.0%
GTGAGAAATGAGTTATTGTT+TGG + Chr3:3353921-3353940 MsG0380011675.01.T01:intron 30.0%
TAAAAAGATAAACATACCGC+TGG - Chr3:3348621-3348640 None:intergenic 30.0%
TACTAGATAAATGATGTTGG+AGG - Chr3:3350520-3350539 None:intergenic 30.0%
TATCAAAGGACATGATTCAT+TGG + Chr3:3351570-3351589 MsG0380011675.01.T01:CDS 30.0%
TATGAAACTTCATGATGAGA+TGG - Chr3:3347889-3347908 None:intergenic 30.0%
TCAAAAAAGAAAGGACAAAC+AGG + Chr3:3351896-3351915 MsG0380011675.01.T01:CDS 30.0%
TGAACTATATACCACAATTG+TGG - Chr3:3354215-3354234 None:intergenic 30.0%
TGCAGGGATTAAACTTAAAT+AGG - Chr3:3352404-3352423 None:intergenic 30.0%
TGGTTCGATTCAATATGATT+AGG + Chr3:3354348-3354367 MsG0380011675.01.T01:intron 30.0%
TTACGAGTACAAATCATACT+CGG - Chr3:3354768-3354787 None:intergenic 30.0%
TTAGGGATGAATTCGATTAA+TGG - Chr3:3353380-3353399 None:intergenic 30.0%
TTCCTTAAACTAGTAACTCA+GGG + Chr3:3348163-3348182 MsG0380011675.01.T01:intron 30.0%
TTGATTCTATGGTAAGGAAT+TGG + Chr3:3348706-3348725 MsG0380011675.01.T01:intron 30.0%
TTGCATATTTAACCCAATCA+AGG - Chr3:3351772-3351791 None:intergenic 30.0%
TTTACAACTCTCACATTCAT+TGG - Chr3:3354735-3354754 None:intergenic 30.0%
TTTATGCAATTTGGTCAGAT+GGG - Chr3:3349150-3349169 None:intergenic 30.0%
TTTGACTCATGAATCAAATG+AGG - Chr3:3354284-3354303 None:intergenic 30.0%
! AACAATGGAACACCTATTTT+TGG - Chr3:3349259-3349278 None:intergenic 30.0%
! AAGGAAAATTTTTCCTAGAG+GGG + Chr3:3347834-3347853 MsG0380011675.01.T01:five_prime_UTR 30.0%
! ACCATTCATCCAATTCTTTT+GGG - Chr3:3347965-3347984 None:intergenic 30.0%
! GAGTTAAATCTACGACTTTT+TGG - Chr3:3350848-3350867 None:intergenic 30.0%
! TAATGCGGTTTTTATGTGTT+TGG - Chr3:3349092-3349111 None:intergenic 30.0%
! TACCATTCATCCAATTCTTT+TGG - Chr3:3347966-3347985 None:intergenic 30.0%
! TATTCATGCAAGATGCTTTT+AGG + Chr3:3354150-3354169 MsG0380011675.01.T01:intron 30.0%
! TGTTTGATGATAATTTGTGG+AGG - Chr3:3350344-3350363 None:intergenic 30.0%
! TTTAACACATGCTTAACTTG+TGG - Chr3:3352076-3352095 None:intergenic 30.0%
! TTTTACCCGGTTTCAATAAA+CGG + Chr3:3352019-3352038 MsG0380011675.01.T01:CDS 30.0%
!! ACAATGGAACACCTATTTTT+GGG - Chr3:3349258-3349277 None:intergenic 30.0%
!! GTCATTGACTTTGATCAAAA+GGG - Chr3:3354556-3354575 None:intergenic 30.0%
!! TAAAAGCATCTTGCATGAAT+AGG - Chr3:3354151-3354170 None:intergenic 30.0%
!! TGTCATTGACTTTGATCAAA+AGG - Chr3:3354557-3354576 None:intergenic 30.0%
!!! TCTATAGATAGAAGTGCTTT+TGG + Chr3:3353191-3353210 MsG0380011675.01.T01:CDS 30.0%
!!! TGTTTTTTTTTTTTTGGGGG+GGG - Chr3:3350658-3350677 None:intergenic 30.0%
AAACCAAAGCCAAAAATCCT+TGG + Chr3:3347774-3347793 MsG0380011675.01.T01:five_prime_UTR 35.0%
AAATTGGAAGCTATAGCTGA+TGG - Chr3:3348476-3348495 None:intergenic 35.0%
AAATTGTTACAACAACTGGG+GGG - Chr3:3349668-3349687 None:intergenic 35.0%
AATAAACGGGTCAAATGGTT+TGG + Chr3:3352033-3352052 MsG0380011675.01.T01:CDS 35.0%
ACTTTCAACCCCAAAAGAAT+TGG + Chr3:3347953-3347972 MsG0380011675.01.T01:five_prime_UTR 35.0%
AGAGTGGATAGTTATGCAAT+TGG + Chr3:3352115-3352134 MsG0380011675.01.T01:CDS 35.0%
AGGGTCTACAACAAGTATAT+TGG + Chr3:3354706-3354725 MsG0380011675.01.T01:three_prime_UTR 35.0%
ATAACTCATTTCTCACGATC+AGG - Chr3:3353917-3353936 None:intergenic 35.0%
ATTATTGAGAGCTTTGCTCA+AGG + Chr3:3354382-3354401 MsG0380011675.01.T01:CDS 35.0%
ATTCTCAACTATGTGTGAGT+GGG - Chr3:3349296-3349315 None:intergenic 35.0%
ATTGACGTGTTGCAATTTCA+GGG + Chr3:3353778-3353797 MsG0380011675.01.T01:intron 35.0%
ATTGTTACATACATCATGGG+AGG - Chr3:3349597-3349616 None:intergenic 35.0%
ATTTAACCCAATCAAGGAGA+AGG - Chr3:3351766-3351785 None:intergenic 35.0%
CAGTGATGAATATGAAGAAG+TGG + Chr3:3352849-3352868 MsG0380011675.01.T01:CDS 35.0%
CTACAATCAGATCTCAACTA+AGG - Chr3:3349352-3349371 None:intergenic 35.0%
CTCCATATATTGCTTCTGTT+GGG - Chr3:3354438-3354457 None:intergenic 35.0%
CTGCGTTAAATTTATGGAGA+TGG - Chr3:3352584-3352603 None:intergenic 35.0%
CTTTATGCAATTTGGTCAGA+TGG - Chr3:3349151-3349170 None:intergenic 35.0%
GACAAATGGTTCGATATCAA+CGG + Chr3:3351620-3351639 MsG0380011675.01.T01:CDS 35.0%
GACAATATAGATTGTGGAAG+AGG + Chr3:3353167-3353186 MsG0380011675.01.T01:CDS 35.0%
GACTTTGATCAAAAGGGAAA+GGG - Chr3:3354550-3354569 None:intergenic 35.0%
GAGTGGATAGTTATGCAATT+GGG + Chr3:3352116-3352135 MsG0380011675.01.T01:CDS 35.0%
GATAAGTTGCATAGAAAGCA+TGG - Chr3:3354081-3354100 None:intergenic 35.0%
GATGTTGAAAAACCAGTTTG+TGG + Chr3:3353965-3353984 MsG0380011675.01.T01:CDS 35.0%
GCTAATGTAGATATAGAGGA+TGG - Chr3:3350498-3350517 None:intergenic 35.0%
GTACTTTCAAATATGTCTGG+TGG - Chr3:3352658-3352677 None:intergenic 35.0%
GTTCAAATGCCAAATCTTGA+TGG - Chr3:3354512-3354531 None:intergenic 35.0%
GTTGCTTGACTAATGTTCAA+TGG - Chr3:3352898-3352917 None:intergenic 35.0%
GTTTCAATAAACGGGTCAAA+TGG + Chr3:3352028-3352047 MsG0380011675.01.T01:CDS 35.0%
TACCAAGACTAGTATTAGAG+AGG - Chr3:3353280-3353299 None:intergenic 35.0%
TACCCAACAGAAGCAATATA+TGG + Chr3:3354433-3354452 MsG0380011675.01.T01:CDS 35.0%
TAGTCTGCTACATGCATATT+TGG + Chr3:3348229-3348248 MsG0380011675.01.T01:intron 35.0%
TAGTTTGGATGATACAAGAG+TGG + Chr3:3352099-3352118 MsG0380011675.01.T01:CDS 35.0%
TATTCTAACATTCCTTGTGC+CGG - Chr3:3348825-3348844 None:intergenic 35.0%
TCAAAGTCTCCATCAAGATT+TGG + Chr3:3354500-3354519 MsG0380011675.01.T01:CDS 35.0%
TCCTTAAACTAGTAACTCAG+GGG + Chr3:3348164-3348183 MsG0380011675.01.T01:intron 35.0%
TCTATGGTAAGGAATTGGTT+GGG + Chr3:3348711-3348730 MsG0380011675.01.T01:intron 35.0%
TCTGACCAAATTGCATAAAG+TGG + Chr3:3349151-3349170 MsG0380011675.01.T01:intron 35.0%
TGACTTTGATCAAAAGGGAA+AGG - Chr3:3354551-3354570 None:intergenic 35.0%
TGATACTGAAAGTGATGACT+TGG + Chr3:3352294-3352313 MsG0380011675.01.T01:CDS 35.0%
TGATGAATATGAAGAAGTGG+TGG + Chr3:3352852-3352871 MsG0380011675.01.T01:CDS 35.0%
TGGAATCTAGATCCTGTTAA+AGG - Chr3:3349501-3349520 None:intergenic 35.0%
TGTTTGGTAAACAAACGCAT+AGG + Chr3:3353566-3353585 MsG0380011675.01.T01:intron 35.0%
TTAGAGAGGCGGAAATAAAT+TGG - Chr3:3353266-3353285 None:intergenic 35.0%
TTCTATGGTAAGGAATTGGT+TGG + Chr3:3348710-3348729 MsG0380011675.01.T01:intron 35.0%
TTGATATCGAACCATTTGTC+AGG - Chr3:3351620-3351639 None:intergenic 35.0%
TTGGACCACTTTATGCAATT+TGG - Chr3:3349159-3349178 None:intergenic 35.0%
TTGGTAGAATCAAGATGAGT+CGG + Chr3:3348265-3348284 MsG0380011675.01.T01:intron 35.0%
TTGTCAAATAGCACTGTTCT+TGG - Chr3:3352769-3352788 None:intergenic 35.0%
TTTAACCCAATCAAGGAGAA+GGG - Chr3:3351765-3351784 None:intergenic 35.0%
TTTACCCGGTTTCAATAAAC+GGG + Chr3:3352020-3352039 MsG0380011675.01.T01:CDS 35.0%
TTTGACCCGTTTATTGAAAC+CGG - Chr3:3352028-3352047 None:intergenic 35.0%
TTTGTTTGCTTTCCAGCAAT+GGG - Chr3:3347678-3347697 None:intergenic 35.0%
! AAAGAAGGATTTTGTTGGGT+TGG + Chr3:3352260-3352279 MsG0380011675.01.T01:CDS 35.0%
! ATGATGAGATGGATTTGACT+TGG - Chr3:3347878-3347897 None:intergenic 35.0%
! CAATGTTCTCCAAGGATTTT+TGG - Chr3:3347786-3347805 None:intergenic 35.0%
! CCATTCATCCAATTCTTTTG+GGG - Chr3:3347964-3347983 None:intergenic 35.0%
! GAAAGTGATGACTTGGAAAA+AGG + Chr3:3352301-3352320 MsG0380011675.01.T01:CDS 35.0%
! GATAATTTGTGGAGGATTGT+TGG - Chr3:3350336-3350355 None:intergenic 35.0%
! GGACAAATGCAATGTTTTCT+TGG + Chr3:3347914-3347933 MsG0380011675.01.T01:five_prime_UTR 35.0%
! TGATGACTTGGAAAAAGGTT+GGG + Chr3:3352306-3352325 MsG0380011675.01.T01:CDS 35.0%
! TTAAGCTCTTCTCTTTTTGG+TGG - Chr3:3349007-3349026 None:intergenic 35.0%
!! CTGGAACTAATTTGCTTCTA+TGG + Chr3:3352794-3352813 MsG0380011675.01.T01:CDS 35.0%
!! GGTGTGGTATAAAGTATTGT+TGG - Chr3:3350476-3350495 None:intergenic 35.0%
!! TCTTTTGTGTTGATGGAACA+AGG + Chr3:3353312-3353331 MsG0380011675.01.T01:CDS 35.0%
!! TTTTGTTTGCTTTCCAGCAA+TGG - Chr3:3347679-3347698 None:intergenic 35.0%
!!! AATTCTTTTGGGGTTGAAAG+TGG - Chr3:3347954-3347973 None:intergenic 35.0%
!!! ACAGCATCTCATTGACTTTT+TGG + Chr3:3348552-3348571 MsG0380011675.01.T01:intron 35.0%
!!! AGCATCTCATTGACTTTTTG+GGG + Chr3:3348554-3348573 MsG0380011675.01.T01:intron 35.0%
!!! ATGGGGTCAATACTTTTTTC+TGG - Chr3:3350311-3350330 None:intergenic 35.0%
!!! CAAACTGGTTTTTCAACATC+AGG - Chr3:3353965-3353984 None:intergenic 35.0%
!!! CAGCATCTCATTGACTTTTT+GGG + Chr3:3348553-3348572 MsG0380011675.01.T01:intron 35.0%
!!! GTGTGGTTTTGATGAAACAA+TGG - Chr3:3349274-3349293 None:intergenic 35.0%
!!! GTTTTTTTTTTTTTGGGGGG+GGG - Chr3:3350657-3350676 None:intergenic 35.0%
!!! TTTTTTTTTTTTTGGGGGGG+GGG - Chr3:3350656-3350675 None:intergenic 35.0%
AAGCTCTCTACTTCTTCTAC+AGG - Chr3:3352820-3352839 None:intergenic 40.0%
AATCCTGATTCAGCTGTATG+GGG + Chr3:3351524-3351543 MsG0380011675.01.T01:CDS 40.0%
AATTGTTACAACAACTGGGG+GGG - Chr3:3349667-3349686 None:intergenic 40.0%
ACAACTCTCACATTCATTGG+AGG - Chr3:3354732-3354751 None:intergenic 40.0%
ACAATCCTGATTCAGCTGTA+TGG + Chr3:3351522-3351541 MsG0380011675.01.T01:CDS 40.0%
ACGGTTTGAATCCACAATTG+TGG + Chr3:3354201-3354220 MsG0380011675.01.T01:intron 40.0%
AGCATTATGATTTCGCCATC+TGG - Chr3:3351674-3351693 None:intergenic 40.0%
AGGGAGTTAACATGGTTACA+TGG - Chr3:3350546-3350565 None:intergenic 40.0%
CAAGACTAGTATTAGAGAGG+CGG - Chr3:3353277-3353296 None:intergenic 40.0%
CAATCCTGATTCAGCTGTAT+GGG + Chr3:3351523-3351542 MsG0380011675.01.T01:CDS 40.0%
CAATGAACAAGACAGGTCTA+CGG + Chr3:3349176-3349195 MsG0380011675.01.T01:intron 40.0%
CAGCTGAATCAGGATTGTAT+TGG - Chr3:3351520-3351539 None:intergenic 40.0%
CCCCAAAAGAATTGGATGAA+TGG + Chr3:3347961-3347980 MsG0380011675.01.T01:exon 40.0%
GAACATTAGTCAAGCAACAC+AGG + Chr3:3352900-3352919 MsG0380011675.01.T01:CDS 40.0%
GATTCTCAACTATGTGTGAG+TGG - Chr3:3349297-3349316 None:intergenic 40.0%
GATTGACGTGTTGCAATTTC+AGG + Chr3:3353777-3353796 MsG0380011675.01.T01:intron 40.0%
GATTTGACACAGATCTGTAG+AGG - Chr3:3350390-3350409 None:intergenic 40.0%
GCAATTACTCCGACAATATC+TGG - Chr3:3349233-3349252 None:intergenic 40.0%
GCAATTGCTAGAATGCCAAA+TGG - Chr3:3353218-3353237 None:intergenic 40.0%
GCTCCATATATTGCTTCTGT+TGG - Chr3:3354439-3354458 None:intergenic 40.0%
GGAAAATGGAGAGTCCTTAT+TGG + Chr3:3351872-3351891 MsG0380011675.01.T01:CDS 40.0%
GGAGGCTAATGTAGATATAG+AGG - Chr3:3350502-3350521 None:intergenic 40.0%
GGTTTGGACACATCAGTAAA+TGG + Chr3:3352049-3352068 MsG0380011675.01.T01:CDS 40.0%
GTTGCAGAGATATACTTGCT+TGG + Chr3:3351178-3351197 MsG0380011675.01.T01:intron 40.0%
GTTTAAGTAAGGCGAATCGT+GGG - Chr3:3350572-3350591 None:intergenic 40.0%
TAACTACTTACATGCGGTTC+CGG + Chr3:3351970-3351989 MsG0380011675.01.T01:CDS 40.0%
TACCATCCCATGTGAAACAA+TGG - Chr3:3351485-3351504 None:intergenic 40.0%
TATCTTGTTCGGACTTGGAT+TGG - Chr3:3349210-3349229 None:intergenic 40.0%
TGAATCATCCTTCACCTAGT+TGG + Chr3:3354612-3354631 MsG0380011675.01.T01:three_prime_UTR 40.0%
TGGCTAGTAATTCACTACTC+AGG - Chr3:3352638-3352657 None:intergenic 40.0%
TGGTGTCCTTCACTTTGATT+TGG + Chr3:3354632-3354651 MsG0380011675.01.T01:three_prime_UTR 40.0%
TGTATGGGGCAACATTTCAT+GGG + Chr3:3351538-3351557 MsG0380011675.01.T01:CDS 40.0%
TGTTTAAGTAAGGCGAATCG+TGG - Chr3:3350573-3350592 None:intergenic 40.0%
TGTTTGTCCTAGTGAGCATT+TGG + Chr3:3350903-3350922 MsG0380011675.01.T01:intron 40.0%
TTAACCCAATCAAGGAGAAG+GGG - Chr3:3351764-3351783 None:intergenic 40.0%
TTGACCCGTTTATTGAAACC+GGG - Chr3:3352027-3352046 None:intergenic 40.0%
TTGTTTGCTTTCCAGCAATG+GGG - Chr3:3347677-3347696 None:intergenic 40.0%
TTTGCAATGCATTTCGGCTT+TGG - Chr3:3352690-3352709 None:intergenic 40.0%
! AACTAGTAACTCAGGGGTAT+TGG + Chr3:3348170-3348189 MsG0380011675.01.T01:intron 40.0%
! ACATCATTTTCACGTCTCTG+AGG - Chr3:3353675-3353694 None:intergenic 40.0%
! ACCCCTGAGTTACTAGTTTA+AGG - Chr3:3348168-3348187 None:intergenic 40.0%
! GAAGCTATAGCTGATGGTTT+TGG - Chr3:3348470-3348489 None:intergenic 40.0%
! GCATGTGTTAAAGGCTAGTT+TGG + Chr3:3352084-3352103 MsG0380011675.01.T01:CDS 40.0%
! GGTGTCCTTCACTTTGATTT+GGG + Chr3:3354633-3354652 MsG0380011675.01.T01:three_prime_UTR 40.0%
! GTGATGACTTGGAAAAAGGT+TGG + Chr3:3352305-3352324 MsG0380011675.01.T01:CDS 40.0%
! TGAGCAAGAAGTACAAGAAG+AGG - Chr3:3354058-3354077 None:intergenic 40.0%
!! GTGCTATTTGACAAGAAGAC+TGG + Chr3:3352775-3352794 MsG0380011675.01.T01:CDS 40.0%
!! TGTTTGGTGCAGATCATCAA+AGG + Chr3:3353937-3353956 MsG0380011675.01.T01:intron 40.0%
!!! AGAAGTGCTTTTGGACCATT+TGG + Chr3:3353200-3353219 MsG0380011675.01.T01:CDS 40.0%
!!! ATTGGGTTGCTTTTGGACTA+TGG + Chr3:3352196-3352215 MsG0380011675.01.T01:CDS 40.0%
!!! GGTCAATACTTTTTTCTGGC+CGG - Chr3:3350307-3350326 None:intergenic 40.0%
!!! TCTCCAAGGATTTTTGGCTT+TGG - Chr3:3347780-3347799 None:intergenic 40.0%
!!! TTTTTTCTGGCCGGATTCTT+GGG - Chr3:3350298-3350317 None:intergenic 40.0%
!!! TTTTTTTTTTTTGGGGGGGG+GGG - Chr3:3350655-3350674 None:intergenic 40.0%
AAAAGGTTGGGCATCTCTTC+AGG + Chr3:3352318-3352337 MsG0380011675.01.T01:CDS 45.0%
AACTACTTACATGCGGTTCC+GGG + Chr3:3351971-3351990 MsG0380011675.01.T01:CDS 45.0%
AGTGGTCCAATGAACAAGAC+AGG + Chr3:3349169-3349188 MsG0380011675.01.T01:intron 45.0%
ATATCAACGGTGTATGGACC+GGG + Chr3:3351633-3351652 MsG0380011675.01.T01:CDS 45.0%
ATGGGGTCATGCTGTATCAA+AGG + Chr3:3351556-3351575 MsG0380011675.01.T01:CDS 45.0%
ATTGAGAGCTTTGCTCAAGG+AGG + Chr3:3354385-3354404 MsG0380011675.01.T01:CDS 45.0%
ATTGTTACAACAACTGGGGG+GGG - Chr3:3349666-3349685 None:intergenic 45.0%
CAAAGTGAAGGACACCAACT+AGG - Chr3:3354629-3354648 None:intergenic 45.0%
CAATACCCACATCCTCTAGT+GGG - Chr3:3352180-3352199 None:intergenic 45.0%
CACTAGAGGATGTGGGTATT+GGG + Chr3:3352179-3352198 MsG0380011675.01.T01:CDS 45.0%
CCTTTGAACCAATGCCAGAT+GGG - Chr3:3351814-3351833 None:intergenic 45.0%
CTGTATGGGGCAACATTTCA+TGG + Chr3:3351537-3351556 MsG0380011675.01.T01:CDS 45.0%
CTTTGAACCAATGCCAGATG+GGG - Chr3:3351813-3351832 None:intergenic 45.0%
GAACCATTTGTCAGGTTCCA+TGG - Chr3:3351612-3351631 None:intergenic 45.0%
GAGAAGGGGATCAGATAAGT+TGG - Chr3:3351750-3351769 None:intergenic 45.0%
GAGGAGGAGGAAAACTTTGT+GGG - Chr3:3350613-3350632 None:intergenic 45.0%
GATAACCCACTAGAGGATGT+GGG + Chr3:3352172-3352191 MsG0380011675.01.T01:CDS 45.0%
GATATCAACGGTGTATGGAC+CGG + Chr3:3351632-3351651 MsG0380011675.01.T01:CDS 45.0%
GCAGGTCCATTGTTTCACAT+GGG + Chr3:3351476-3351495 MsG0380011675.01.T01:CDS 45.0%
GGAACTTTGCTACCACAAAC+TGG - Chr3:3353980-3353999 None:intergenic 45.0%
GGTTCGATATCAACGGTGTA+TGG + Chr3:3351627-3351646 MsG0380011675.01.T01:CDS 45.0%
GTAGATATAGAGGATGGGTG+TGG - Chr3:3350492-3350511 None:intergenic 45.0%
GTATGGGGCAACATTTCATG+GGG + Chr3:3351539-3351558 MsG0380011675.01.T01:CDS 45.0%
GTCCATTGTTTCACATGGGA+TGG + Chr3:3351480-3351499 MsG0380011675.01.T01:CDS 45.0%
GTGCTGTGTGATGTTACCTA+AGG + Chr3:3353729-3353748 MsG0380011675.01.T01:intron 45.0%
GTTACATACATCATGGGAGG+AGG - Chr3:3349594-3349613 None:intergenic 45.0%
TCCTTTGAACCAATGCCAGA+TGG - Chr3:3351815-3351834 None:intergenic 45.0%
TCTGGTATCTTGTTCGGACT+TGG - Chr3:3349215-3349234 None:intergenic 45.0%
TGATAACCCACTAGAGGATG+TGG + Chr3:3352171-3352190 MsG0380011675.01.T01:CDS 45.0%
TGATCCCCTTCTCCTTGATT+GGG + Chr3:3351757-3351776 MsG0380011675.01.T01:CDS 45.0%
TGCAGGTCCATTGTTTCACA+TGG + Chr3:3351475-3351494 MsG0380011675.01.T01:CDS 45.0%
TGTGGAGGATTGTTGGAGAT+GGG - Chr3:3350329-3350348 None:intergenic 45.0%
TTCAATGGAACAACAGAGCC+AGG - Chr3:3352883-3352902 None:intergenic 45.0%
TTGACACAGATCTGTAGAGG+TGG - Chr3:3350387-3350406 None:intergenic 45.0%
TTGCACTTGCACGTAGTTGT+CGG - Chr3:3351711-3351730 None:intergenic 45.0%
TTGCCATGGAACCTGACAAA+TGG + Chr3:3351606-3351625 MsG0380011675.01.T01:CDS 45.0%
TTGGGTTCCAAATGCTCACT+AGG - Chr3:3350913-3350932 None:intergenic 45.0%
TTGTGGAGGATTGTTGGAGA+TGG - Chr3:3350330-3350349 None:intergenic 45.0%
TTTGAACCAATGCCAGATGG+GGG - Chr3:3351812-3351831 None:intergenic 45.0%
! AAAGCATTCTATCCGGCACA+AGG + Chr3:3348810-3348829 MsG0380011675.01.T01:intron 45.0%
! AGGACTCTCCATTTTCCATC+TGG - Chr3:3351869-3351888 None:intergenic 45.0%
! ATCTGTAGAGGTGGTGGTAT+GGG - Chr3:3350378-3350397 None:intergenic 45.0%
! CAACCGCAAAGCATTCTATC+CGG + Chr3:3348803-3348822 MsG0380011675.01.T01:intron 45.0%
! CGCCTCTCTAATACTAGTCT+TGG + Chr3:3353275-3353294 MsG0380011675.01.T01:CDS 45.0%
! CGTAGACCTGTCTTGTTCAT+TGG - Chr3:3349178-3349197 None:intergenic 45.0%
! GGAATGTGTGGACTTTTACC+CGG + Chr3:3352006-3352025 MsG0380011675.01.T01:CDS 45.0%
!! ACATCCTCTAGTGGGTTATC+AGG - Chr3:3352172-3352191 None:intergenic 45.0%
!! AGGTCGGTGTAGTGGATAAA+TGG - Chr3:3349526-3349545 None:intergenic 45.0%
!! ATTGTTGGCTCGTTACAGTG+AGG - Chr3:3350461-3350480 None:intergenic 45.0%
!! CACAACGTTGTTTTGCAGGT+CGG - Chr3:3349542-3349561 None:intergenic 45.0%
!! GCTTCACAACGTTGTTTTGC+AGG - Chr3:3349546-3349565 None:intergenic 45.0%
!! GGTGTAGTGGATAAATGGCA+TGG - Chr3:3349521-3349540 None:intergenic 45.0%
!! TTTTTCTGGCCGGATTCTTG+GGG - Chr3:3350297-3350316 None:intergenic 45.0%
!!! CTTTTTTCTGGCCGGATTCT+TGG - Chr3:3350299-3350318 None:intergenic 45.0%
!!! TGTGGGTATTGGGTTGCTTT+TGG + Chr3:3352189-3352208 MsG0380011675.01.T01:CDS 45.0%
!!! TTTTTTTTTTTGGGGGGGGG+GGG - Chr3:3350654-3350673 None:intergenic 45.0%
!!! AAAAAAGTATTATAAAAAAA+AGG - Chr3:3353040-3353059 None:intergenic 5.0%
!!! TAATTATTAAATTTTGTAAA+GGG + Chr3:3352345-3352364 MsG0380011675.01.T01:intron 5.0%
ACACAGATCTGTAGAGGTGG+TGG - Chr3:3350384-3350403 None:intergenic 50.0%
CAACTATGTGTGAGTGGGTG+TGG - Chr3:3349291-3349310 None:intergenic 50.0%
CCAATACCCACATCCTCTAG+TGG - Chr3:3352181-3352200 None:intergenic 50.0%
CCACTAGAGGATGTGGGTAT+TGG + Chr3:3352178-3352197 MsG0380011675.01.T01:CDS 50.0%
CGTTACAGTGAGGAAGTAGG+TGG - Chr3:3350451-3350470 None:intergenic 50.0%
CTGATCCCCTTCTCCTTGAT+TGG + Chr3:3351756-3351775 MsG0380011675.01.T01:CDS 50.0%
GAAGAAGTGGTGGTTACACC+TGG + Chr3:3352862-3352881 MsG0380011675.01.T01:CDS 50.0%
GAAGGACACCAACTAGGTGA+AGG - Chr3:3354623-3354642 None:intergenic 50.0%
GATTTCCGTGATCCAACCAC+TGG + Chr3:3351833-3351852 MsG0380011675.01.T01:CDS 50.0%
GCTCGTTACAGTGAGGAAGT+AGG - Chr3:3350454-3350473 None:intergenic 50.0%
GGAGGAGGAGGAAAACTTTG+TGG - Chr3:3350614-3350633 None:intergenic 50.0%
GGTTCCTGATAACCCACTAG+AGG + Chr3:3352165-3352184 MsG0380011675.01.T01:CDS 50.0%
GTGCCGGATAGAATGCTTTG+CGG - Chr3:3348809-3348828 None:intergenic 50.0%
GTGGAGGATTGTTGGAGATG+GGG - Chr3:3350328-3350347 None:intergenic 50.0%
TACGGGTATGTGGGAATGTG+TGG + Chr3:3351994-3352013 MsG0380011675.01.T01:CDS 50.0%
TCCAACCAGTGGTTGGATCA+CGG - Chr3:3351841-3351860 None:intergenic 50.0%
TCCTGTTACGTGCGGATGTT+TGG + Chr3:3348578-3348597 MsG0380011675.01.T01:intron 50.0%
TGAACAAGACAGGTCTACGG+AGG + Chr3:3349179-3349198 MsG0380011675.01.T01:intron 50.0%
TTCCTAGAGGGGTTGCTCAA+GGG + Chr3:3347845-3347864 MsG0380011675.01.T01:five_prime_UTR 50.0%
TTGCCCCATACAGCTGAATC+AGG - Chr3:3351530-3351549 None:intergenic 50.0%
TTGTTACAACAACTGGGGGG+GGG - Chr3:3349665-3349684 None:intergenic 50.0%
TTTCCTAGAGGGGTTGCTCA+AGG + Chr3:3347844-3347863 MsG0380011675.01.T01:five_prime_UTR 50.0%
! AGGGGATCAGATAAGTTGGC+AGG - Chr3:3351746-3351765 None:intergenic 50.0%
! ATCCAACCACTGGTTGGATC+GGG + Chr3:3351843-3351862 MsG0380011675.01.T01:CDS 50.0%
! GATCCAACCACTGGTTGGAT+CGG + Chr3:3351842-3351861 MsG0380011675.01.T01:CDS 50.0%
! GATCTGTAGAGGTGGTGGTA+TGG - Chr3:3350379-3350398 None:intergenic 50.0%
! GTGGGTTGAGGGAGTTAACA+TGG - Chr3:3350554-3350573 None:intergenic 50.0%
! TAAGGCGAATCGTGGGTTGA+GGG - Chr3:3350565-3350584 None:intergenic 50.0%
! TGACTTGGCTTAGATCCCAG+CGG + Chr3:3348602-3348621 MsG0380011675.01.T01:intron 50.0%
! TGTTTTGCAGGTCGGTGTAG+TGG - Chr3:3349534-3349553 None:intergenic 50.0%
! TTTGGGGTTCCTGTTACGTG+CGG + Chr3:3348570-3348589 MsG0380011675.01.T01:intron 50.0%
!! CCCATCTGGCATTGGTTCAA+AGG + Chr3:3351811-3351830 MsG0380011675.01.T01:CDS 50.0%
!! TTTTCTGGCCGGATTCTTGG+GGG - Chr3:3350296-3350315 None:intergenic 50.0%
!!! TTTTTTTTTTGGGGGGGGGG+GGG - Chr3:3350653-3350672 None:intergenic 50.0%
AAAGGGAAGGGTCAGCGTTG+TGG - Chr3:3350416-3350435 None:intergenic 55.0%
AGTGAGGAAGTAGGTGGCTG+AGG - Chr3:3350445-3350464 None:intergenic 55.0%
CAGATGGGGGCTCCATGATT+GGG - Chr3:3351799-3351818 None:intergenic 55.0%
CATTCCCACATACCCGTACC+CGG - Chr3:3351992-3352011 None:intergenic 55.0%
CTTACATGCGGTTCCGGGTA+CGG + Chr3:3351976-3351995 MsG0380011675.01.T01:CDS 55.0%
GCAATGGGGTGTGTAGAGCA+TGG - Chr3:3347663-3347682 None:intergenic 55.0%
GCCAAACATCCGCACGTAAC+AGG - Chr3:3348582-3348601 None:intergenic 55.0%
GGATCGGGCCAGATGGAAAA+TGG + Chr3:3351858-3351877 MsG0380011675.01.T01:CDS 55.0%
GGTCAGATGGGCAGAAACTC+AGG - Chr3:3349138-3349157 None:intergenic 55.0%
GTGAGGAAGTAGGTGGCTGA+GGG - Chr3:3350444-3350463 None:intergenic 55.0%
GTGCGGATGTTTGGCTGACT+TGG + Chr3:3348587-3348606 MsG0380011675.01.T01:intron 55.0%
TCCGTGATCCAACCACTGGT+TGG + Chr3:3351837-3351856 MsG0380011675.01.T01:CDS 55.0%
TCCTAGAGGGGTTGCTCAAG+GGG + Chr3:3347846-3347865 MsG0380011675.01.T01:five_prime_UTR 55.0%
TGCTCTACACACCCCATTGC+TGG + Chr3:3347663-3347682 MsG0380011675.01.T01:five_prime_UTR 55.0%
TGTTACAACAACTGGGGGGG+GGG - Chr3:3349664-3349683 None:intergenic 55.0%
TTACATGCGGTTCCGGGTAC+GGG + Chr3:3351977-3351996 MsG0380011675.01.T01:CDS 55.0%
! AGAGGTGGTGGTATGGGTGT+GGG - Chr3:3350372-3350391 None:intergenic 55.0%
! GTAAGGCGAATCGTGGGTTG+AGG - Chr3:3350566-3350585 None:intergenic 55.0%
! TAGAGGTGGTGGTATGGGTG+TGG - Chr3:3350373-3350392 None:intergenic 55.0%
! TCCGCAACGCTTTTGCCAGA+TGG + Chr3:3351656-3351675 MsG0380011675.01.T01:CDS 55.0%
! TTTCTGGCCGGATTCTTGGG+GGG - Chr3:3350295-3350314 None:intergenic 55.0%
!! GCCATCTGGCAAAAGCGTTG+CGG - Chr3:3351660-3351679 None:intergenic 55.0%
!!! TTTTTTTTTGGGGGGGGGGG+GGG - Chr3:3350652-3350671 None:intergenic 55.0%
ACCCCTTGAGCAACCCCTCT+AGG - Chr3:3347850-3347869 None:intergenic 60.0%
ACTGGTTGGATCGGGCCAGA+TGG + Chr3:3351851-3351870 MsG0380011675.01.T01:CDS 60.0%
AGGAAGTAGGTGGCTGAGGG+AGG - Chr3:3350441-3350460 None:intergenic 60.0%
ATCTGGCCCGATCCAACCAG+TGG - Chr3:3351852-3351871 None:intergenic 60.0%
ATGGAGCCCCCATCTGGCAT+TGG + Chr3:3351803-3351822 MsG0380011675.01.T01:CDS 60.0%
CCAATCATGGAGCCCCCATC+TGG + Chr3:3351797-3351816 MsG0380011675.01.T01:CDS 60.0%
CCAGATGGGGGCTCCATGAT+TGG - Chr3:3351800-3351819 None:intergenic 60.0%
CTGAGGGAGGGCAAAGGGAA+GGG - Chr3:3350428-3350447 None:intergenic 60.0%
GGAAGGGTCAGCGTTGTGGA+AGG - Chr3:3350412-3350431 None:intergenic 60.0%
GGAAGTAGGTGGCTGAGGGA+GGG - Chr3:3350440-3350459 None:intergenic 60.0%
GGTTCCGGGTACGGGTATGT+GGG + Chr3:3351985-3352004 MsG0380011675.01.T01:CDS 60.0%
GTTACAACAACTGGGGGGGG+GGG - Chr3:3349663-3349682 None:intergenic 60.0%
TTACAACAACTGGGGGGGGG+GGG - Chr3:3349662-3349681 None:intergenic 60.0%
TTCTGGCCGGATTCTTGGGG+GGG - Chr3:3350294-3350313 None:intergenic 60.0%
!! TGGCAAAAGCGTTGCGGACC+CGG - Chr3:3351654-3351673 None:intergenic 60.0%
!!! TTTTTTTTGGGGGGGGGGGG+GGG - Chr3:3350651-3350670 None:intergenic 60.0%
AGGTGGCTGAGGGAGGGCAA+AGG - Chr3:3350434-3350453 None:intergenic 65.0%
CGGTTCCGGGTACGGGTATG+TGG + Chr3:3351984-3352003 MsG0380011675.01.T01:CDS 65.0%
GCTGAGGGAGGGCAAAGGGA+AGG - Chr3:3350429-3350448 None:intergenic 65.0%
GGCCCGATCCAACCAGTGGT+TGG - Chr3:3351848-3351867 None:intergenic 65.0%
GGTGGCTGAGGGAGGGCAAA+GGG - Chr3:3350433-3350452 None:intergenic 65.0%
TACAACAACTGGGGGGGGGG+GGG - Chr3:3349661-3349680 None:intergenic 65.0%
TCTGGCCGGATTCTTGGGGG+GGG - Chr3:3350293-3350312 None:intergenic 65.0%
!!! TTTTTTTGGGGGGGGGGGGG+GGG - Chr3:3350650-3350669 None:intergenic 65.0%
ACAACAACTGGGGGGGGGGG+GGG - Chr3:3349660-3349679 None:intergenic 70.0%
CTGGCCGGATTCTTGGGGGG+GGG - Chr3:3350292-3350311 None:intergenic 70.0%
TGGCCGGATTCTTGGGGGGG+GGG - Chr3:3350291-3350310 None:intergenic 70.0%
!!! TTTTTTGGGGGGGGGGGGGG+GGG - Chr3:3350649-3350668 None:intergenic 70.0%
AACAACTGGGGGGGGGGGGG+GGG - Chr3:3349658-3349677 None:intergenic 75.0%
CAACAACTGGGGGGGGGGGG+GGG - Chr3:3349659-3349678 None:intergenic 75.0%
CCCCCCCCCCCCCAAGAATC+CGG + Chr3:3350285-3350304 MsG0380011675.01.T01:intron 75.0%
CCGGATTCTTGGGGGGGGGG+GGG - Chr3:3350288-3350307 None:intergenic 75.0%
CGGATTCTTGGGGGGGGGGG+GGG - Chr3:3350287-3350306 None:intergenic 75.0%
GATTCTTGGGGGGGGGGGGG+GGG - Chr3:3350285-3350304 None:intergenic 75.0%
GCCGGATTCTTGGGGGGGGG+GGG - Chr3:3350289-3350308 None:intergenic 75.0%
GGATTCTTGGGGGGGGGGGG+GGG - Chr3:3350286-3350305 None:intergenic 75.0%
GGCCGGATTCTTGGGGGGGG+GGG - Chr3:3350290-3350309 None:intergenic 75.0%
GGGGGGGGATGAGGAGGAGG+AGG - Chr3:3350626-3350645 None:intergenic 75.0%
!! TTTTTGGGGGGGGGGGGGGG+GGG - Chr3:3350648-3350667 None:intergenic 75.0%
! ACAACTGGGGGGGGGGGGGG+GGG - Chr3:3349657-3349676 None:intergenic 80.0%
! GGGGGGGGGGGATGAGGAGG+AGG - Chr3:3350629-3350648 None:intergenic 80.0%
!!! TTTTGGGGGGGGGGGGGGGG+GGG - Chr3:3350647-3350666 None:intergenic 80.0%
! AACTGGGGGGGGGGGGGGGG+GGG - Chr3:3349655-3349674 None:intergenic 85.0%
! CAACTGGGGGGGGGGGGGGG+GGG - Chr3:3349656-3349675 None:intergenic 85.0%
! GGGGGGGGGGGGGGATGAGG+AGG - Chr3:3350632-3350651 None:intergenic 85.0%
! TTTGGGGGGGGGGGGGGGGG+GGG - Chr3:3350646-3350665 None:intergenic 85.0%
! ACTGGGGGGGGGGGGGGGGG+GGG - Chr3:3349654-3349673 None:intergenic 90.0%
! GGGGGGGGGGGGGGGGGATG+AGG - Chr3:3350635-3350654 None:intergenic 90.0%
! TTGGGGGGGGGGGGGGGGGG+GGG - Chr3:3350645-3350664 None:intergenic 90.0%
! CTGGGGGGGGGGGGGGGGGG+GGG - Chr3:3349653-3349672 None:intergenic 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG - Chr3:3349652-3349671 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
Chr3 gene 3347607 3354813 3347607 ID=MsG0380011675.01;Name=MsG0380011675.01
Chr3 mRNA 3347607 3354813 3347607 ID=MsG0380011675.01.T01;Parent=MsG0380011675.01;Name=MsG0380011675.01.T01;_AED=0.49;_eAED=0.49;_QI=373|1|1|1|0.8|0.66|6|252|512
Chr3 exon 3347607 3347982 3347607 ID=MsG0380011675.01.T01:exon:993;Parent=MsG0380011675.01.T01
Chr3 exon 3351473 3352339 3351473 ID=MsG0380011675.01.T01:exon:994;Parent=MsG0380011675.01.T01
Chr3 exon 3352760 3352921 3352760 ID=MsG0380011675.01.T01:exon:995;Parent=MsG0380011675.01.T01
Chr3 exon 3353107 3353333 3353107 ID=MsG0380011675.01.T01:exon:996;Parent=MsG0380011675.01.T01
Chr3 exon 3353949 3354036 3353949 ID=MsG0380011675.01.T01:exon:997;Parent=MsG0380011675.01.T01
Chr3 exon 3354370 3354813 3354370 ID=MsG0380011675.01.T01:exon:998;Parent=MsG0380011675.01.T01
Chr3 five_prime_UTR 3347607 3347979 3347607 ID=MsG0380011675.01.T01:five_prime_utr;Parent=MsG0380011675.01.T01
Chr3 CDS 3347980 3347982 3347980 ID=MsG0380011675.01.T01:cds;Parent=MsG0380011675.01.T01
Chr3 CDS 3351473 3352339 3351473 ID=MsG0380011675.01.T01:cds;Parent=MsG0380011675.01.T01
Chr3 CDS 3352760 3352921 3352760 ID=MsG0380011675.01.T01:cds;Parent=MsG0380011675.01.T01
Chr3 CDS 3353107 3353333 3353107 ID=MsG0380011675.01.T01:cds;Parent=MsG0380011675.01.T01
Chr3 CDS 3353949 3354036 3353949 ID=MsG0380011675.01.T01:cds;Parent=MsG0380011675.01.T01
Chr3 CDS 3354370 3354561 3354370 ID=MsG0380011675.01.T01:cds;Parent=MsG0380011675.01.T01
Chr3 three_prime_UTR 3354562 3354813 3354562 ID=MsG0380011675.01.T01:three_prime_utr;Parent=MsG0380011675.01.T01
Gene Sequence

>MsG0380011675.01.T01

ATGATTGCAGGTCCATTGTTTCACATGGGATGGTACCATTTATTTTACCAATACAATCCTGATTCAGCTGTATGGGGCAACATTTCATGGGGTCATGCTGTATCAAAGGACATGATTCATTGGCTCTACCTTCCCATTGCCATGGAACCTGACAAATGGTTCGATATCAACGGTGTATGGACCGGGTCCGCAACGCTTTTGCCAGATGGCGAAATCATAATGCTTTATACGGGCGATACCGACAACTACGTGCAAGTGCAAAATCTTGCTCATCCTGCCAACTTATCTGATCCCCTTCTCCTTGATTGGGTTAAATATGCAAATAACCCAATCATGGAGCCCCCATCTGGCATTGGTTCAAAGGATTTCCGTGATCCAACCACTGGTTGGATCGGGCCAGATGGAAAATGGAGAGTCCTTATTGGATCAAAAAAGAAAGGACAAACAGGTCTTTCATTAGTTTACAAGACCACAAATTTCATAAATTTTGAACTAAATGATAACTACTTACATGCGGTTCCGGGTACGGGTATGTGGGAATGTGTGGACTTTTACCCGGTTTCAATAAACGGGTCAAATGGTTTGGACACATCAGTAAATGGACCACAAGTTAAGCATGTGTTAAAGGCTAGTTTGGATGATACAAGAGTGGATAGTTATGCAATTGGGACTTATTTTATTGAAAATGATACATGGGTTCCTGATAACCCACTAGAGGATGTGGGTATTGGGTTGCTTTTGGACTATGGAAGATACTATGCTTCAAAGACTTTCTATGATCAAGTGAAAAAAAGAAGGATTTTGTTGGGTTGGATTAATGAGACTGATACTGAAAGTGATGACTTGGAAAAAGGTTGGGCATCTCTTCAGACAATTCCAAGAACAGTGCTATTTGACAAGAAGACTGGAACTAATTTGCTTCTATGGCCTGTAGAAGAAGTAGAGAGCTTAAGATTGAGCAGTGATGAATATGAAGAAGTGGTGGTTACACCTGGCTCTGTTGTTCCATTGAACATTAGTCAAGCAACACAGTTGGACATATTTGCTGAATTTGAGATTGAATCATTGGCATCTAAAGCAAATATTAGCAATGACAATATAGATTGTGGAAGAGGTTCTATAGATAGAAGTGCTTTTGGACCATTTGGCATTCTAGCAATTGCAGATGACACACTTTCTGAACAAACTCCAATTTATTTCCGCCTCTCTAATACTAGTCTTGGTAGTTCAACAAATTTCTTTTGTGTTGATGGAACAAGATCATCAAAGGCTCCTGATGTTGAAAAACCAGTTTGTGGTAGCAAAGTTCCAGTTTTCAGTGATGAAAAATTATCAATGAGGGTCTTGGTTGACCATTCAATTATTGAGAGCTTTGCTCAAGGAGGAAGAGTTGTGATCTCAAGTAGAGTTTACCCAACAGAAGCAATATATGGAGCTGCAAGATTATTTCTATTCAACAATGCAACTAACATAAACATCAAAGTCTCCATCAAGATTTGGCATTTGAACTCTGCTTTTATACGTCCCTTTCCCTTTTGA
Protein sequence

>MsG0380011675.01.T01

MIAGPLFHMGWYHLFYQYNPDSAVWGNISWGHAVSKDMIHWLYLPIAMEPDKWFDINGVWTGSATLLPDGEIIMLYTGDTDNYVQVQNLAHPANLSDPLLLDWVKYANNPIMEPPSGIGSKDFRDPTTGWIGPDGKWRVLIGSKKKGQTGLSLVYKTTNFINFELNDNYLHAVPGTGMWECVDFYPVSINGSNGLDTSVNGPQVKHVLKASLDDTRVDSYAIGTYFIENDTWVPDNPLEDVGIGLLLDYGRYYASKTFYDQVKKRRILLGWINETDTESDDLEKGWASLQTIPRTVLFDKKTGTNLLLWPVEEVESLRLSSDEYEEVVVTPGSVVPLNISQATQLDIFAEFEIESLASKANISNDNIDCGRGSIDRSAFGPFGILAIADDTLSEQTPIYFRLSNTSLGSSTNFFCVDGTRSSKAPDVEKPVCGSKVPVFSDEKLSMRVLVDHSIIESFAQGGRVVISSRVYPTEAIYGAARLFLFNNATNINIKVSIKIWHLNSAFIRPFPF*