AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030747.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030747.01.T01 MTR_6g011700 89.908 763 19 2 1 763 1 705 0.0 1394
MsG0680030747.01.T01 MTR_6g011770 80.472 763 91 2 1 763 1 705 0.0 1229
MsG0680030747.01.T01 MTR_8g056030 74.934 762 157 2 2 763 4 731 0.0 1180
MsG0680030747.01.T01 MTR_5g039880 68.373 762 207 2 2 763 5 732 0.0 1092
MsG0680030747.01.T01 MTR_7g039690 66.273 762 199 3 2 763 5 708 0.0 1042
MsG0680030747.01.T01 MTR_7g039660 63.648 762 231 5 2 763 5 720 0.0 989
MsG0680030747.01.T01 MTR_1g040925 65.776 599 186 3 167 763 360 941 0.0 803
MsG0680030747.01.T01 MTR_1g040925 55.409 379 132 3 6 383 17 359 1.95e-131 414
MsG0680030747.01.T01 MTR_7g039790 50.868 749 304 9 20 763 28 717 0.0 733
MsG0680030747.01.T01 MTR_1g040995 67.304 523 168 2 167 687 360 881 0.0 722
MsG0680030747.01.T01 MTR_1g040995 55.409 379 132 3 6 383 17 359 8.02e-132 413
MsG0680030747.01.T01 MTR_5g039770 53.903 679 284 7 89 763 1 654 0.0 721
MsG0680030747.01.T01 MTR_7g445240 49.531 747 301 9 20 763 28 701 0.0 702
MsG0680030747.01.T01 MTR_5g040040 56.926 527 119 6 237 763 168 586 0.0 565
MsG0680030747.01.T01 MTR_5g039890 55.242 496 144 3 1 451 1 463 0.0 533
MsG0680030747.01.T01 MTR_2g019260 39.662 769 405 15 4 763 74 792 1.33e-176 526
MsG0680030747.01.T01 MTR_2g019260 38.670 737 394 15 4 731 74 761 1.30e-162 489
MsG0680030747.01.T01 MTR_7g039680 55.231 411 127 4 1 410 1 355 6.73e-149 439
MsG0680030747.01.T01 MTR_5g040180 54.103 390 143 3 14 401 4 359 9.21e-141 419
MsG0680030747.01.T01 MTR_7g108340 35.193 699 421 13 87 763 47 735 6.86e-132 409
MsG0680030747.01.T01 MTR_2g437390 33.842 721 438 14 72 763 32 742 3.89e-127 397
MsG0680030747.01.T01 MTR_4g119413 33.514 737 449 14 59 763 17 744 1.73e-125 392
MsG0680030747.01.T01 MTR_7g039430 54.062 357 128 3 14 368 4 326 2.41e-123 373
MsG0680030747.01.T01 MTR_5g040190 53.221 357 131 3 14 368 4 326 8.83e-121 367
MsG0680030747.01.T01 MTR_7g039440 58.784 296 121 1 106 401 1 295 7.68e-120 362
MsG0680030747.01.T01 MTR_1g040965 73.953 215 56 0 549 763 4 218 2.42e-111 337
MsG0680030747.01.T01 MTR_4g119413 32.528 538 330 10 85 599 59 586 9.97e-86 284
MsG0680030747.01.T01 MTR_7g039380 50.847 236 81 2 14 247 4 206 3.98e-71 231
MsG0680030747.01.T01 MTR_5g040230 48.106 264 107 4 14 247 4 267 1.97e-69 229
MsG0680030747.01.T01 MTR_7g039770 57.009 107 43 2 494 598 1 106 1.04e-32 125
MsG0680030747.01.T01 MTR_7g039770 60.870 92 36 0 672 763 105 196 3.64e-30 118
MsG0680030747.01.T01 MTR_7g445230 57.009 107 43 2 494 598 1 106 1.04e-32 125
MsG0680030747.01.T01 MTR_7g445230 60.870 92 36 0 672 763 105 196 3.64e-30 118
MsG0680030747.01.T01 MTR_5g039820 43.195 169 46 3 600 763 1 124 4.49e-30 115
MsG0680030747.01.T01 MTR_1g099430 40.870 115 30 2 649 763 19 95 3.87e-16 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030747.01.T01 AT1G26830 72.572 762 175 2 2 763 5 732 0.0 1161
MsG0680030747.01.T01 AT1G69670 72.047 762 179 2 2 763 5 732 0.0 1145
MsG0680030747.01.T01 AT1G69670 72.047 762 179 2 2 763 5 732 0.0 1145
MsG0680030747.01.T01 AT5G46210 40.078 766 406 15 4 763 74 792 1.02e-169 508
MsG0680030747.01.T01 AT4G02570 34.708 703 422 13 87 763 47 738 1.25e-132 411
MsG0680030747.01.T01 AT4G02570 34.708 703 422 13 87 763 47 738 1.25e-132 411
MsG0680030747.01.T01 AT4G02570 34.708 703 422 13 87 763 47 738 1.25e-132 411
MsG0680030747.01.T01 AT4G02570 34.708 703 422 13 87 763 47 738 1.25e-132 411
MsG0680030747.01.T01 AT1G02980 34.467 676 400 12 116 763 82 742 2.02e-118 374
MsG0680030747.01.T01 AT1G02980 34.467 676 400 12 116 763 82 742 2.02e-118 374
MsG0680030747.01.T01 AT1G43140 32.761 699 415 15 87 763 56 721 5.60e-107 343
MsG0680030747.01.T01 AT1G59790 27.273 319 216 7 87 396 53 364 2.91e-32 129
MsG0680030747.01.T01 AT1G59790 26.198 313 215 7 87 390 53 358 6.19e-29 119
MsG0680030747.01.T01 AT1G59800 28.079 203 140 3 86 284 47 247 2.10e-22 97.8
MsG0680030747.01.T01 AT4G12100 23.333 300 197 9 108 398 137 412 1.85e-14 77.0

Find 151 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGGATCTTTCAACCTTTC+AGG 0.150230 6:-8513514 None:intergenic
AATATGGTGCTACATAAATT+TGG 0.153660 6:+8512719 MsG0680030747.01.T01:CDS
CTAGCAAAGAGGCTTCTTTC+AGG 0.196658 6:+8513826 MsG0680030747.01.T01:CDS
ACTGACGTGGCAAGCTAATA+TGG 0.220372 6:+8514152 MsG0680030747.01.T01:CDS
TATGGGGAATGCTGATTTAA+AGG 0.232083 6:+8514170 MsG0680030747.01.T01:CDS
ATGAACTTGGTTTGAATCTA+TGG 0.232138 6:+8512948 MsG0680030747.01.T01:CDS
AATTAAGATGCTGACGGATT+TGG 0.234870 6:+8513087 MsG0680030747.01.T01:CDS
TCAGCTTTGAAGAGCTTTAT+AGG 0.248136 6:+8510526 MsG0680030747.01.T01:CDS
AAACTTCGTAGAGGGATAAA+AGG 0.263934 6:+8513703 MsG0680030747.01.T01:CDS
TTTGTAGAAACTTGAATAAA+AGG 0.270110 6:-8513142 None:intergenic
ATATGGTGCTACATAAATTT+GGG 0.301338 6:+8512720 MsG0680030747.01.T01:CDS
TTGTTTCGTAGGGTACCTTC+TGG 0.309037 6:+8513424 MsG0680030747.01.T01:CDS
TCAATTCACTTCTAAGTTAG+AGG 0.310239 6:+8513912 MsG0680030747.01.T01:CDS
ATTAAGATGCTGACGGATTT+GGG 0.311827 6:+8513088 MsG0680030747.01.T01:CDS
GTCAACAAACTAGGCTTGTT+AGG 0.325213 6:+8514886 MsG0680030747.01.T01:three_prime_UTR
CATGAACATGAAGGTAGTTT+TGG 0.327253 6:+8511675 MsG0680030747.01.T01:CDS
TACTGGTAAGCAGTTAATTA+TGG 0.332800 6:+8513489 MsG0680030747.01.T01:CDS
GTTCAGGAATGCTTATAATA+TGG 0.335111 6:+8512703 MsG0680030747.01.T01:intron
AAACATTCAGCTCATGCTTC+TGG 0.345881 6:-8514209 None:intergenic
CAAACACATCCTTCTCTTGC+AGG 0.358631 6:-8513783 None:intergenic
TGTTCATGACTCAGATAGTA+TGG 0.364150 6:-8511660 None:intergenic
AGAGTTCATTTCTTTGTTTG+TGG 0.365470 6:+8513675 MsG0680030747.01.T01:CDS
GCTGATTTAAAGGCTACATT+TGG 0.371270 6:+8514180 MsG0680030747.01.T01:CDS
TAGTCTTAGTTTCGTTAGAA+TGG 0.378273 6:-8512985 None:intergenic
GGAAGATTACATTGCGGACT+AGG 0.395922 6:-8514063 None:intergenic
GTAATCTTCCATCTGAAATC+CGG 0.403875 6:+8514076 MsG0680030747.01.T01:CDS
TTGTTAGGGTCACTTCTGTT+TGG 0.404372 6:+8514901 MsG0680030747.01.T01:three_prime_UTR
TCATTTGCAATGCCTTGTTA+TGG 0.406474 6:-8512862 None:intergenic
ATTCACTAGCAAGCTCTTCA+AGG 0.417223 6:+8514437 MsG0680030747.01.T01:CDS
TCAGATATGTCCTTGCTCAT+TGG 0.420832 6:-8514387 None:intergenic
AGCATCTCATGGTGCTGAGT+TGG 0.421446 6:+8513984 MsG0680030747.01.T01:CDS
GCATCTCATGGTGCTGAGTT+GGG 0.426946 6:+8513985 MsG0680030747.01.T01:CDS
TTCAAACCAAGTTCATGAAC+GGG 0.430650 6:-8512941 None:intergenic
TATCCACACTCTCGTTCATA+TGG 0.433213 6:+8513336 MsG0680030747.01.T01:CDS
AACTTCGTAGAGGGATAAAA+GGG 0.437841 6:+8513704 MsG0680030747.01.T01:CDS
GAGGCGTTTAAATGAAGAAA+TGG 0.441848 6:+8513234 MsG0680030747.01.T01:CDS
CTGACGTGGCAAGCTAATAT+GGG 0.447158 6:+8514153 MsG0680030747.01.T01:CDS
TTTAAAGGCTACATTTGGTA+AGG 0.448303 6:+8514185 MsG0680030747.01.T01:CDS
TGTTTCGTAGGGTACCTTCT+GGG 0.451428 6:+8513425 MsG0680030747.01.T01:CDS
ATTCTGAAATGACTTGTCAT+TGG 0.452379 6:-8513602 None:intergenic
TAGCAAAGAGGCTTCTTTCA+GGG 0.457017 6:+8513827 MsG0680030747.01.T01:CDS
TTGTGAGGGTAATGAAATCT+AGG 0.460014 6:+8514562 MsG0680030747.01.T01:CDS
TCTGTCCAGGTGCTTACAAC+AGG 0.465386 6:+8514024 MsG0680030747.01.T01:CDS
AGGGACTGTTGTTGCACAAA+GGG 0.470120 6:+8514467 MsG0680030747.01.T01:CDS
CAGTCGTTGGCCTTAGTCAA+AGG 0.474202 6:+8514342 MsG0680030747.01.T01:CDS
CTTTGAAGAGCTTTATAGGT+TGG 0.476355 6:+8510530 MsG0680030747.01.T01:CDS
AAGGCTTCTCAAAGTCAGTC+TGG 0.477739 6:-8513123 None:intergenic
ATATTCAAATGCAGAATTCA+AGG 0.485048 6:-8513626 None:intergenic
TAATCTTCCATCTGAAATCC+GGG 0.485583 6:+8514077 MsG0680030747.01.T01:CDS
CTGAAAGAAGCCTCTTTGCT+AGG 0.489589 6:-8513825 None:intergenic
TGGAGGAACTCAACAGGAAG+TGG 0.491844 6:+8512834 MsG0680030747.01.T01:CDS
AGGTGCTTACAACAGGTTCA+TGG 0.492266 6:+8514031 MsG0680030747.01.T01:CDS
GAATGTATAACTTGTTTCGT+AGG 0.493143 6:+8513413 MsG0680030747.01.T01:CDS
GATAAAAGGGGTTGGTGAGG+AGG 0.495340 6:+8513717 MsG0680030747.01.T01:CDS
CAAACTTCTTTCTGCCTCAT+CGG 0.495929 6:-8513860 None:intergenic
AGTCGTTGGCCTTAGTCAAA+GGG 0.498877 6:+8514343 MsG0680030747.01.T01:CDS
CCGAGACATACTCATGTACA+TGG 0.503098 6:+8512886 MsG0680030747.01.T01:CDS
GAAGAGGTGCCTTCAGTCGT+TGG 0.504097 6:+8514329 MsG0680030747.01.T01:CDS
CTGCAGCTGCTTCGTGACCT+CGG 0.504915 6:-8514613 None:intergenic
CATTGCGGACTAGGTTGAGT+TGG 0.504999 6:-8514054 None:intergenic
CATCAATGAGCATATTAACT+AGG 0.505030 6:-8513369 None:intergenic
AGAAATGAACTCTGGAGATC+GGG 0.506629 6:-8513665 None:intergenic
AAGAAATGAACTCTGGAGAT+CGG 0.506678 6:-8513666 None:intergenic
AGGGATAAAAGGGGTTGGTG+AGG 0.506807 6:+8513714 MsG0680030747.01.T01:CDS
GGAGAGAGTATCTCACTACT+TGG 0.507157 6:+8513255 MsG0680030747.01.T01:CDS
CGAGGTCACGAAGCAGCTGC+AGG 0.512795 6:+8514614 MsG0680030747.01.T01:CDS
TTTGGGGAGAAACTTTACTC+TGG 0.520439 6:+8512737 MsG0680030747.01.T01:CDS
AAGTTTCGTAGTTATTATCT+CGG 0.521156 6:+8514111 MsG0680030747.01.T01:CDS
CAGTTAAAACAATTTCATCA+TGG 0.521284 6:+8514808 MsG0680030747.01.T01:three_prime_UTR
TCAACAAACTAGGCTTGTTA+GGG 0.523908 6:+8514887 MsG0680030747.01.T01:three_prime_UTR
CAAGGTTTCTTAGCATCTCA+TGG 0.525590 6:+8513973 MsG0680030747.01.T01:CDS
CATCCTTCTCTTGCAGGTAC+CGG 0.527813 6:-8513777 None:intergenic
AATGTATAACTTGTTTCGTA+GGG 0.534146 6:+8513414 MsG0680030747.01.T01:CDS
TTAATCATTGTGAGCCCAGA+AGG 0.537256 6:-8513439 None:intergenic
ACAAACAAAGAAATGAACTC+TGG 0.544090 6:-8513673 None:intergenic
AGACAGAAAGCCGCAGATTG+AGG 0.544522 6:+8514533 MsG0680030747.01.T01:CDS
CAATCAATCAAAGCTGCTCA+AGG 0.545434 6:+8512800 MsG0680030747.01.T01:CDS
CAAAGACCCCGGATTTCAGA+TGG 0.545924 6:-8514084 None:intergenic
TATAGAAACTCGACAAAGAG+TGG 0.546676 6:+8514506 MsG0680030747.01.T01:CDS
TGCTGATCGGATGACTTGTA+AGG 0.549561 6:+8514269 MsG0680030747.01.T01:CDS
TTAATTGAATCATGTGATTG+TGG 0.550947 6:+8513190 MsG0680030747.01.T01:CDS
TGACTAAGGCCAACGACTGA+AGG 0.554710 6:-8514338 None:intergenic
AAAGCATTAGTACACACATC+TGG 0.555795 6:-8514239 None:intergenic
CTTAAGCTCAAAACAGAATG+TGG 0.557946 6:+8513886 MsG0680030747.01.T01:CDS
ACTTCTTATGATATGATGCA+AGG 0.558216 6:+8513955 MsG0680030747.01.T01:CDS
TAGCCCTACACTATCTGTCC+AGG 0.560211 6:+8514011 MsG0680030747.01.T01:CDS
CAATTCACTTCTAAGTTAGA+GGG 0.560970 6:+8513913 MsG0680030747.01.T01:CDS
ATTTACAATCGTAACGCTAG+TGG 0.563604 6:+8510501 MsG0680030747.01.T01:CDS
TTAAAGGCTACATTTGGTAA+GGG 0.566080 6:+8514186 MsG0680030747.01.T01:CDS
ATGAACCTGTTGTAAGCACC+TGG 0.566331 6:-8514029 None:intergenic
TACCCATGTCAGACTTGAAG+AGG 0.566524 6:+8514313 MsG0680030747.01.T01:CDS
TGATGACAAATATGATGACT+TGG 0.569545 6:+8513387 MsG0680030747.01.T01:CDS
TTGACCTTGTGCTTAAAGAG+AGG 0.571221 6:+8513026 MsG0680030747.01.T01:CDS
TGGACCACGATACACGAACA+TGG 0.572056 6:-8511640 None:intergenic
TTGCGCATAGTCAACAAACT+AGG 0.572057 6:+8514877 MsG0680030747.01.T01:three_prime_UTR
GAGGGTAATGAAATCTAGGC+GGG 0.574043 6:+8514566 MsG0680030747.01.T01:CDS
CATTCCTCTCTTTAAGCACA+AGG 0.575206 6:-8513030 None:intergenic
AGACGCTGCACAAAATCGAC+AGG 0.580439 6:-8513532 None:intergenic
TTTCCGGTACCTGCAAGAGA+AGG 0.581468 6:+8513774 MsG0680030747.01.T01:CDS
GCACCTCTTCAAGTCTGACA+TGG 0.581848 6:-8514316 None:intergenic
CCATGTACATGAGTATGTCT+CGG 0.582690 6:-8512886 None:intergenic
TGGATGACAAACTTCGTAGA+GGG 0.586598 6:+8513695 MsG0680030747.01.T01:CDS
GCACCTGGACAGATAGTGTA+GGG 0.589037 6:-8514014 None:intergenic
TATCCCATGTTCGTGTATCG+TGG 0.589338 6:+8511636 MsG0680030747.01.T01:CDS
TTGTCTCAGATGAGCAGTAA+CGG 0.592895 6:-8512771 None:intergenic
CGTAGAGGGATAAAAGGGGT+TGG 0.600611 6:+8513709 MsG0680030747.01.T01:CDS
TTATAAGCACCGTGTAGTTG+TGG 0.601194 6:+8510425 MsG0680030747.01.T01:CDS
CTCGTTCATATGGAGAACTC+AGG 0.601425 6:+8513346 MsG0680030747.01.T01:CDS
GAACTTAATTAAGATGCTGA+CGG 0.603217 6:+8513081 MsG0680030747.01.T01:CDS
AGTTAATTATGGATCCTGAA+AGG 0.604723 6:+8513500 MsG0680030747.01.T01:CDS
ATTCAAACCAAGTTCATGAA+CGG 0.606269 6:-8512942 None:intergenic
TAGGGACTGTTGTTGCACAA+AGG 0.608557 6:+8514466 MsG0680030747.01.T01:CDS
TCGGAAAGAGCCAATGAGCA+AGG 0.610423 6:+8514377 MsG0680030747.01.T01:CDS
TCTCCATATGAACGAGAGTG+TGG 0.611580 6:-8513339 None:intergenic
GACTTGTAAGGAGATAGAGC+AGG 0.614296 6:+8514281 MsG0680030747.01.T01:CDS
ATCTCGGCGCTCACAGTGGT+AGG 0.615484 6:+8514127 MsG0680030747.01.T01:CDS
TATGGTGCTACATAAATTTG+GGG 0.615594 6:+8512721 MsG0680030747.01.T01:CDS
AGATTGAGGCAGCAATTGTG+AGG 0.619824 6:+8514547 MsG0680030747.01.T01:CDS
ATAAGCAACACCTAGCAAAG+AGG 0.626717 6:+8513815 MsG0680030747.01.T01:CDS
TTATTAACAGAGGCTTGATG+AGG 0.631918 6:+8513059 MsG0680030747.01.T01:CDS
ACAATTGCTGCCTCAATCTG+CGG 0.633040 6:-8514543 None:intergenic
AATGGTGAAGTTATTAACAG+AGG 0.635361 6:+8513049 MsG0680030747.01.T01:CDS
TACTGTTTCAAGCAAGATAG+CGG 0.637161 6:-8514734 None:intergenic
CACCTCTTCAAGTCTGACAT+GGG 0.641603 6:-8514315 None:intergenic
GGAGGAACTCAACAGGAAGT+GGG 0.642357 6:+8512835 MsG0680030747.01.T01:CDS
GTGGATGACAAACTTCGTAG+AGG 0.651149 6:+8513694 MsG0680030747.01.T01:CDS
TCAAACCAAGTTCATGAACG+GGG 0.658755 6:-8512940 None:intergenic
CAAACCAAGTTCATGAACGG+GGG 0.661181 6:-8512939 None:intergenic
GGACCACGATACACGAACAT+GGG 0.661451 6:-8511639 None:intergenic
TGACGTGGCAAGCTAATATG+GGG 0.661724 6:+8514154 MsG0680030747.01.T01:CDS
ATTCTAACGAAACTAAGACT+AGG 0.662282 6:+8512987 MsG0680030747.01.T01:CDS
TATTATCTCGGCGCTCACAG+TGG 0.667802 6:+8514123 MsG0680030747.01.T01:CDS
GATTGAGGCAGCAATTGTGA+GGG 0.673825 6:+8514548 MsG0680030747.01.T01:CDS
GAAACTTCTCACAAAGACCC+CGG 0.675261 6:-8514095 None:intergenic
AGTTAGGATCCACAACTACA+CGG 0.678703 6:-8510434 None:intergenic
AGAAACTCGACAAAGAGTGG+AGG 0.680888 6:+8514509 MsG0680030747.01.T01:CDS
AGCACCTGGACAGATAGTGT+AGG 0.681962 6:-8514015 None:intergenic
ACATAATAATGTCATCGCCG+AGG 0.682843 6:+8514596 MsG0680030747.01.T01:CDS
TGAGTCAGAGATAACTAGCG+TGG 0.686747 6:+8513288 MsG0680030747.01.T01:CDS
AGGGAAGACTGTATCCGATG+AGG 0.688732 6:+8513846 MsG0680030747.01.T01:CDS
GTCAGAGATAACTAGCGTGG+TGG 0.693563 6:+8513291 MsG0680030747.01.T01:CDS
TATCTGAGTCATGAACATGA+AGG 0.700165 6:+8511666 MsG0680030747.01.T01:CDS
TCAGATGGAAGATTACATTG+CGG 0.706660 6:-8514069 None:intergenic
AATCTTCCATCTGAAATCCG+GGG 0.712246 6:+8514078 MsG0680030747.01.T01:CDS
TGAGGGTAATGAAATCTAGG+CGG 0.717066 6:+8514565 MsG0680030747.01.T01:CDS
CTTGTGCTTAAAGAGAGGAA+TGG 0.720232 6:+8513031 MsG0680030747.01.T01:CDS
GAAGTGGGTAGACCATAACA+AGG 0.733172 6:+8512850 MsG0680030747.01.T01:CDS
ATTATCTGAAGAAAGCTGAG+AGG 0.737332 6:+8513215 MsG0680030747.01.T01:CDS
ACTTCGTAGAGGGATAAAAG+GGG 0.737364 6:+8513705 MsG0680030747.01.T01:CDS
ATATGACAAAGTTATCACAA+CGG 0.738442 6:+8513573 MsG0680030747.01.T01:CDS
ACAGTGGTAGGAGACTGACG+TGG 0.804313 6:+8514139 MsG0680030747.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAATTTAGTAGTAATA+TGG + Chr6:8511249-8511268 MsG0680030747.01.T01:intron 10.0%
!! TTTATTCAAATTTAACTAAA+TGG - Chr6:8512523-8512542 None:intergenic 10.0%
!!! TTATTTTATATTTGATCATA+TGG + Chr6:8510654-8510673 MsG0680030747.01.T01:intron 10.0%
!!! TTCTATATTTTATTTTTTGA+GGG + Chr6:8512072-8512091 MsG0680030747.01.T01:intron 10.0%
!!! TTTCTATATTTTATTTTTTG+AGG + Chr6:8512071-8512090 MsG0680030747.01.T01:intron 10.0%
!! ATAAAAGTAAACCAAAAAAA+TGG - Chr6:8512183-8512202 None:intergenic 15.0%
!! ATTAAATAAATTCAGATTGT+TGG + Chr6:8512391-8512410 MsG0680030747.01.T01:intron 15.0%
!! TAAAAGTAAACCAAAAAAAT+GGG - Chr6:8512182-8512201 None:intergenic 15.0%
!!! ACATGATTCAATTAATTTTT+GGG - Chr6:8513185-8513204 None:intergenic 15.0%
!!! AGTTTTTGTTAAGTAATTTT+GGG + Chr6:8510598-8510617 MsG0680030747.01.T01:intron 15.0%
!!! TAGTTTTTGTTAAGTAATTT+TGG + Chr6:8510597-8510616 MsG0680030747.01.T01:intron 15.0%
!!! TCTATATTTTATTTTTTGAG+GGG + Chr6:8512073-8512092 MsG0680030747.01.T01:intron 15.0%
!!! TTATAAAAATCCCATTTTTT+TGG + Chr6:8512169-8512188 MsG0680030747.01.T01:intron 15.0%
!!! TTGTTTTTTATATGATGATA+TGG + Chr6:8511095-8511114 MsG0680030747.01.T01:intron 15.0%
!! AAATGAAAATATTAGAGAGT+TGG + Chr6:8511011-8511030 MsG0680030747.01.T01:intron 20.0%
!! AGTTATAGTGTATAACAATT+AGG - Chr6:8512612-8512631 None:intergenic 20.0%
!! ATGATATATCTATGATGATA+TGG + Chr6:8511329-8511348 MsG0680030747.01.T01:intron 20.0%
!! ATGATCCATAAAATTGAAAA+AGG - Chr6:8510573-8510592 None:intergenic 20.0%
!! TTTAAATTAAATTGTAGCTG+CGG + Chr6:8511790-8511809 MsG0680030747.01.T01:intron 20.0%
!! TTTGTAGAAACTTGAATAAA+AGG - Chr6:8513145-8513164 None:intergenic 20.0%
!!! AGTTAATTTTGTGATTGAAA+TGG + Chr6:8510799-8510818 MsG0680030747.01.T01:intron 20.0%
!!! CAATGATTTGTATTAGAAAA+TGG + Chr6:8512207-8512226 MsG0680030747.01.T01:intron 20.0%
!!! CACATGATTCAATTAATTTT+TGG - Chr6:8513186-8513205 None:intergenic 20.0%
!!! CTGTTTAAACAATTTTATCA+TGG + Chr6:8514774-8514793 MsG0680030747.01.T01:three_prime_UTR 20.0%
!!! GGGATTGTTTTATATTATTA+TGG + Chr6:8512093-8512112 MsG0680030747.01.T01:intron 20.0%
!!! TTTTTAATAACAACAGGATT+AGG - Chr6:8514651-8514670 None:intergenic 20.0%
! AAGTTTCGTAGTTATTATCT+CGG + Chr6:8514111-8514130 MsG0680030747.01.T01:CDS 25.0%
! AGAAATCAGAATACAGATAT+AGG - Chr6:8512460-8512479 None:intergenic 25.0%
! ATATGACAAAGTTATCACAA+CGG + Chr6:8513573-8513592 MsG0680030747.01.T01:CDS 25.0%
! ATATTCAAATGCAGAATTCA+AGG - Chr6:8513629-8513648 None:intergenic 25.0%
! ATTTGGGCATATATGTATAT+GGG + Chr6:8512659-8512678 MsG0680030747.01.T01:intron 25.0%
! CAGTTAAAACAATTTCATCA+TGG + Chr6:8514808-8514827 MsG0680030747.01.T01:three_prime_UTR 25.0%
! GAATCTTTAGTTACAAATAG+AGG + Chr6:8511475-8511494 MsG0680030747.01.T01:intron 25.0%
! GCTATTCGTGTTATAAAATA+GGG + Chr6:8512558-8512577 MsG0680030747.01.T01:intron 25.0%
! TAACTAAATGGAAAGTTTGA+TGG - Chr6:8512511-8512530 None:intergenic 25.0%
! TATTTGGGCATATATGTATA+TGG + Chr6:8512658-8512677 MsG0680030747.01.T01:intron 25.0%
! TGCTATTCGTGTTATAAAAT+AGG + Chr6:8512557-8512576 MsG0680030747.01.T01:intron 25.0%
! TTAACGTCTTTACAATCTTT+AGG - Chr6:8511875-8511894 None:intergenic 25.0%
! TTAATTGAATCATGTGATTG+TGG + Chr6:8513190-8513209 MsG0680030747.01.T01:CDS 25.0%
! TTGTAAAGACGTTAATATTG+AGG + Chr6:8511880-8511899 MsG0680030747.01.T01:intron 25.0%
! TTTGATCATATGGATGATTA+TGG + Chr6:8510664-8510683 MsG0680030747.01.T01:intron 25.0%
!! ATCCTGTTGTTATTAAAAAG+CGG + Chr6:8514652-8514671 MsG0680030747.01.T01:CDS 25.0%
!! ATGTCATGACTTCTTTTATA+CGG + Chr6:8513464-8513483 MsG0680030747.01.T01:CDS 25.0%
!! ATTATTATGGTCTGTTTCTT+TGG + Chr6:8512106-8512125 MsG0680030747.01.T01:intron 25.0%
!! TTATTATGGTCTGTTTCTTT+GGG + Chr6:8512107-8512126 MsG0680030747.01.T01:intron 25.0%
!!! AATATGGTGCTACATAAATT+TGG + Chr6:8512719-8512738 MsG0680030747.01.T01:CDS 25.0%
!!! AATGTATAACTTGTTTCGTA+GGG + Chr6:8513414-8513433 MsG0680030747.01.T01:CDS 25.0%
!!! ATATGGTGCTACATAAATTT+GGG + Chr6:8512720-8512739 MsG0680030747.01.T01:CDS 25.0%
!!! CATCACCTTTTTCAATTTTA+TGG + Chr6:8510565-8510584 MsG0680030747.01.T01:intron 25.0%
!!! GAATTACATTTTAACCTTTG+TGG + Chr6:8511429-8511448 MsG0680030747.01.T01:intron 25.0%
!!! TAATCATAATTTGTTCGTTC+AGG + Chr6:8512687-8512706 MsG0680030747.01.T01:intron 25.0%
AAGCTCTTCAAGGTAAAAAT+AGG + Chr6:8514447-8514466 MsG0680030747.01.T01:CDS 30.0%
AATGGTGAAGTTATTAACAG+AGG + Chr6:8513049-8513068 MsG0680030747.01.T01:CDS 30.0%
ACAAACAAAGAAATGAACTC+TGG - Chr6:8513676-8513695 None:intergenic 30.0%
ACTTCTTATGATATGATGCA+AGG + Chr6:8513955-8513974 MsG0680030747.01.T01:CDS 30.0%
AGAATTGCATTTCAATCTTG+AGG + Chr6:8510758-8510777 MsG0680030747.01.T01:intron 30.0%
AGCTCTTCAAGGTAAAAATA+GGG + Chr6:8514448-8514467 MsG0680030747.01.T01:CDS 30.0%
AGTTAATTATGGATCCTGAA+AGG + Chr6:8513500-8513519 MsG0680030747.01.T01:CDS 30.0%
ATGGATGATTATGTCTTGAT+GGG + Chr6:8511114-8511133 MsG0680030747.01.T01:intron 30.0%
ATTCAAACCAAGTTCATGAA+CGG - Chr6:8512945-8512964 None:intergenic 30.0%
ATTCTAACGAAACTAAGACT+AGG + Chr6:8512987-8513006 MsG0680030747.01.T01:CDS 30.0%
CAATTCACTTCTAAGTTAGA+GGG + Chr6:8513913-8513932 MsG0680030747.01.T01:CDS 30.0%
CATCAATGAGCATATTAACT+AGG - Chr6:8513372-8513391 None:intergenic 30.0%
CTCTACTAATCCTCATATTT+GGG + Chr6:8512643-8512662 MsG0680030747.01.T01:intron 30.0%
GAACTTAATTAAGATGCTGA+CGG + Chr6:8513081-8513100 MsG0680030747.01.T01:CDS 30.0%
GTTCAGGAATGCTTATAATA+TGG + Chr6:8512703-8512722 MsG0680030747.01.T01:intron 30.0%
TACATATATGCCCAAATATG+AGG - Chr6:8512656-8512675 None:intergenic 30.0%
TACTGGTAAGCAGTTAATTA+TGG + Chr6:8513489-8513508 MsG0680030747.01.T01:CDS 30.0%
TATGGATGATTATGTCTTGA+TGG + Chr6:8511113-8511132 MsG0680030747.01.T01:intron 30.0%
TCAAAGGGAAAAATGTTCTT+CGG + Chr6:8514358-8514377 MsG0680030747.01.T01:CDS 30.0%
TCAATTCACTTCTAAGTTAG+AGG + Chr6:8513912-8513931 MsG0680030747.01.T01:CDS 30.0%
TCTCTACTAATCCTCATATT+TGG + Chr6:8512642-8512661 MsG0680030747.01.T01:intron 30.0%
TGATGACAAATATGATGACT+TGG + Chr6:8513387-8513406 MsG0680030747.01.T01:CDS 30.0%
TGCTTCTGCTTAATCATATT+TGG + Chr6:8512366-8512385 MsG0680030747.01.T01:intron 30.0%
TGTTGTATTGCTAAAACTTG+CGG + Chr6:8511814-8511833 MsG0680030747.01.T01:intron 30.0%
TTAAAGGCTACATTTGGTAA+GGG + Chr6:8514186-8514205 MsG0680030747.01.T01:CDS 30.0%
TTAATCCTCAAATTCCACAA+AGG - Chr6:8511446-8511465 None:intergenic 30.0%
TTTAAAGGCTACATTTGGTA+AGG + Chr6:8514185-8514204 MsG0680030747.01.T01:CDS 30.0%
TTTAACCTTTGTGGAATTTG+AGG + Chr6:8511438-8511457 MsG0680030747.01.T01:intron 30.0%
! AACATTTTCTGGATGCTATT+TGG + Chr6:8512334-8512353 MsG0680030747.01.T01:intron 30.0%
! AACATTTTTCCCTTTGACTA+AGG - Chr6:8514355-8514374 None:intergenic 30.0%
! AGAGTTCATTTCTTTGTTTG+TGG + Chr6:8513675-8513694 MsG0680030747.01.T01:CDS 30.0%
! AGTTCGAGGGAAAATTTTAT+CGG + Chr6:8510855-8510874 MsG0680030747.01.T01:intron 30.0%
! ATAAAATTTTCCCTCGAACT+TGG - Chr6:8510855-8510874 None:intergenic 30.0%
! ATGAACTTGGTTTGAATCTA+TGG + Chr6:8512948-8512967 MsG0680030747.01.T01:CDS 30.0%
! ATGGATGATTATGGATTGAT+GGG + Chr6:8510673-8510692 MsG0680030747.01.T01:intron 30.0%
! TAAAATTTTCCCTCGAACTT+GGG - Chr6:8510854-8510873 None:intergenic 30.0%
! TAGTCTTAGTTTCGTTAGAA+TGG - Chr6:8512988-8513007 None:intergenic 30.0%
! TAGTTTTCCATTTAGTGAGA+AGG + Chr6:8512414-8512433 MsG0680030747.01.T01:intron 30.0%
! TATCACATCGAAACATTTTC+TGG + Chr6:8512323-8512342 MsG0680030747.01.T01:intron 30.0%
! TATGGATGATTATGGATTGA+TGG + Chr6:8510672-8510691 MsG0680030747.01.T01:intron 30.0%
! TGTCATGACTTCTTTTATAC+GGG + Chr6:8513465-8513484 MsG0680030747.01.T01:CDS 30.0%
! TGTCGAGTTTCTATATTTTC+TGG - Chr6:8514501-8514520 None:intergenic 30.0%
! TTTTAGTGCCTATTCTGTTT+TGG + Chr6:8512255-8512274 MsG0680030747.01.T01:intron 30.0%
!! AAACTTTAAAGCTCTCACAA+TGG - Chr6:8511772-8511791 None:intergenic 30.0%
!! ATTCTGAAATGACTTGTCAT+TGG - Chr6:8513605-8513624 None:intergenic 30.0%
!! GAATGTATAACTTGTTTCGT+AGG + Chr6:8513413-8513432 MsG0680030747.01.T01:CDS 30.0%
!! TATGGTGCTACATAAATTTG+GGG + Chr6:8512721-8512740 MsG0680030747.01.T01:CDS 30.0%
!!! ATCCGCTTTTTAATAACAAC+AGG - Chr6:8514657-8514676 None:intergenic 30.0%
AAACTTCGTAGAGGGATAAA+AGG + Chr6:8513703-8513722 MsG0680030747.01.T01:CDS 35.0%
AAATTATTGCCCAAGTTCGA+GGG + Chr6:8510842-8510861 MsG0680030747.01.T01:intron 35.0%
AACTTCGTAGAGGGATAAAA+GGG + Chr6:8513704-8513723 MsG0680030747.01.T01:CDS 35.0%
AAGACATTTGCAAGTTACGT+TGG + Chr6:8512025-8512044 MsG0680030747.01.T01:intron 35.0%
ACAGAATAGGCACTAAAAAC+AGG - Chr6:8512253-8512272 None:intergenic 35.0%
ACCAACAACCAAAACAGAAT+AGG - Chr6:8512266-8512285 None:intergenic 35.0%
AGACATTTGCAAGTTACGTT+GGG + Chr6:8512026-8512045 MsG0680030747.01.T01:intron 35.0%
AGCTTTACCTTCTCACTAAA+TGG - Chr6:8512424-8512443 None:intergenic 35.0%
ATTATCTGAAGAAAGCTGAG+AGG + Chr6:8513215-8513234 MsG0680030747.01.T01:CDS 35.0%
ATTTACAATCGTAACGCTAG+TGG + Chr6:8510501-8510520 MsG0680030747.01.T01:CDS 35.0%
CGAAAATAAAATGAGCGTAG+AGG + Chr6:8510946-8510965 MsG0680030747.01.T01:intron 35.0%
CTAAATGGAAAGTTTGATGG+AGG - Chr6:8512508-8512527 None:intergenic 35.0%
CTAACTACGCTGAAAAAACT+TGG + Chr6:8510451-8510470 MsG0680030747.01.T01:CDS 35.0%
CTCAATGTAATCACATCTGT+TGG - Chr6:8511566-8511585 None:intergenic 35.0%
CTTAAGCTCAAAACAGAATG+TGG + Chr6:8513886-8513905 MsG0680030747.01.T01:CDS 35.0%
GAATTGCATTTCAATCGTAG+TGG + Chr6:8511200-8511219 MsG0680030747.01.T01:intron 35.0%
GGATGATTATGTGTCTTGAT+GGG + Chr6:8511350-8511369 MsG0680030747.01.T01:intron 35.0%
GTGGAATTTGAGGATTAAGT+AGG + Chr6:8511448-8511467 MsG0680030747.01.T01:intron 35.0%
TACTGTTTCAAGCAAGATAG+CGG - Chr6:8514737-8514756 None:intergenic 35.0%
TATAGAAACTCGACAAAGAG+TGG + Chr6:8514506-8514525 MsG0680030747.01.T01:CDS 35.0%
TATCTGAGTCATGAACATGA+AGG + Chr6:8511666-8511685 MsG0680030747.01.T01:CDS 35.0%
TCAGATGGAAGATTACATTG+CGG - Chr6:8514072-8514091 None:intergenic 35.0%
TGGAAAATAGGCTTATTTGG+TGG + Chr6:8511060-8511079 MsG0680030747.01.T01:intron 35.0%
TGGATGATTATGTGTCTTGA+TGG + Chr6:8511349-8511368 MsG0680030747.01.T01:intron 35.0%
TGGTGGAAAATAGGCTTATT+TGG + Chr6:8511057-8511076 MsG0680030747.01.T01:intron 35.0%
TGTTCATGACTCAGATAGTA+TGG - Chr6:8511663-8511682 None:intergenic 35.0%
TTATTAACAGAGGCTTGATG+AGG + Chr6:8513059-8513078 MsG0680030747.01.T01:CDS 35.0%
TTCAAACCAAGTTCATGAAC+GGG - Chr6:8512944-8512963 None:intergenic 35.0%
TTGTGAGGGTAATGAAATCT+AGG + Chr6:8514562-8514581 MsG0680030747.01.T01:CDS 35.0%
TTTGATGGAGGTTTATAGCA+TGG - Chr6:8512496-8512515 None:intergenic 35.0%
! AAAGCATTAGTACACACATC+TGG - Chr6:8514242-8514261 None:intergenic 35.0%
! AAGAAATGAACTCTGGAGAT+CGG - Chr6:8513669-8513688 None:intergenic 35.0%
! ACAAAGTCATGATGCTTTTC+CGG + Chr6:8513758-8513777 MsG0680030747.01.T01:CDS 35.0%
! ACTTCTTTTATACGGGATAC+TGG + Chr6:8513472-8513491 MsG0680030747.01.T01:CDS 35.0%
! CATGAACATGAAGGTAGTTT+TGG + Chr6:8511675-8511694 MsG0680030747.01.T01:CDS 35.0%
! CATTTCAATCGTAGTGGAAT+TGG + Chr6:8511206-8511225 MsG0680030747.01.T01:intron 35.0%
! CTTTGAAGAGCTTTATAGGT+TGG + Chr6:8510530-8510549 MsG0680030747.01.T01:CDS 35.0%
! GAGGCGTTTAAATGAAGAAA+TGG + Chr6:8513234-8513253 MsG0680030747.01.T01:CDS 35.0%
! GCTGATTTAAAGGCTACATT+TGG + Chr6:8514180-8514199 MsG0680030747.01.T01:CDS 35.0%
! GTAATCTTCCATCTGAAATC+CGG + Chr6:8514076-8514095 MsG0680030747.01.T01:CDS 35.0%
! TAATCTTCCATCTGAAATCC+GGG + Chr6:8514077-8514096 MsG0680030747.01.T01:CDS 35.0%
! TCAAGGAGATATTTTCTTGG+AGG + Chr6:8512817-8512836 MsG0680030747.01.T01:CDS 35.0%
! TCATTTGCAATGCCTTGTTA+TGG - Chr6:8512865-8512884 None:intergenic 35.0%
! TCCACCATCTTTTCTGTTAT+GGG - Chr6:8511044-8511063 None:intergenic 35.0%
! TGCTCAAGGAGATATTTTCT+TGG + Chr6:8512814-8512833 MsG0680030747.01.T01:CDS 35.0%
! TGCTTTTCAACAATGCTGAT+CGG + Chr6:8514256-8514275 MsG0680030747.01.T01:CDS 35.0%
! TTCCACCATCTTTTCTGTTA+TGG - Chr6:8511045-8511064 None:intergenic 35.0%
!! AATTAAGATGCTGACGGATT+TGG + Chr6:8513087-8513106 MsG0680030747.01.T01:CDS 35.0%
!! ATTAAGATGCTGACGGATTT+GGG + Chr6:8513088-8513107 MsG0680030747.01.T01:CDS 35.0%
!! CAGAAAAGATGGTGGAAAAT+AGG + Chr6:8511048-8511067 MsG0680030747.01.T01:intron 35.0%
!! GTTTTTAGAGAGGGATAAAG+TGG + Chr6:8514698-8514717 MsG0680030747.01.T01:CDS 35.0%
!! TATGGGGAATGCTGATTTAA+AGG + Chr6:8514170-8514189 MsG0680030747.01.T01:CDS 35.0%
!! TCAACAAACTAGGCTTGTTA+GGG + Chr6:8514887-8514906 MsG0680030747.01.T01:three_prime_UTR 35.0%
!! TCAGCTTTGAAGAGCTTTAT+AGG + Chr6:8510526-8510545 MsG0680030747.01.T01:CDS 35.0%
!!! ATTCTGTTTTGGTTGTTGGT+TGG + Chr6:8512266-8512285 MsG0680030747.01.T01:intron 35.0%
!!! CAAGTTTTTTCAGCGTAGTT+AGG - Chr6:8510453-8510472 None:intergenic 35.0%
AAACATTCAGCTCATGCTTC+TGG - Chr6:8514212-8514231 None:intergenic 40.0%
ACAGGATCTTTCAACCTTTC+AGG - Chr6:8513517-8513536 None:intergenic 40.0%
ACATAATAATGTCATCGCCG+AGG + Chr6:8514596-8514615 MsG0680030747.01.T01:CDS 40.0%
ACCCATAACAGAAAAGATGG+TGG + Chr6:8511040-8511059 MsG0680030747.01.T01:intron 40.0%
ACGAGATTGACGATGTTGTA+TGG + Chr6:8510893-8510912 MsG0680030747.01.T01:intron 40.0%
ACTTCGTAGAGGGATAAAAG+GGG + Chr6:8513705-8513724 MsG0680030747.01.T01:CDS 40.0%
AGCACCCATAACAGAAAAGA+TGG + Chr6:8511037-8511056 MsG0680030747.01.T01:intron 40.0%
AGTTAGGATCCACAACTACA+CGG - Chr6:8510437-8510456 None:intergenic 40.0%
AGTTTCATCTCGATAGGCAT+CGG + Chr6:8512291-8512310 MsG0680030747.01.T01:intron 40.0%
ATAAGCAACACCTAGCAAAG+AGG + Chr6:8513815-8513834 MsG0680030747.01.T01:CDS 40.0%
ATTCACTAGCAAGCTCTTCA+AGG + Chr6:8514437-8514456 MsG0680030747.01.T01:CDS 40.0%
CAAACTTCTTTCTGCCTCAT+CGG - Chr6:8513863-8513882 None:intergenic 40.0%
CAAGGTTTCTTAGCATCTCA+TGG + Chr6:8513973-8513992 MsG0680030747.01.T01:CDS 40.0%
CAATCAATCAAAGCTGCTCA+AGG + Chr6:8512800-8512819 MsG0680030747.01.T01:CDS 40.0%
CAGACAAACACACATTCGAT+CGG - Chr6:8511539-8511558 None:intergenic 40.0%
CATTCCTCTCTTTAAGCACA+AGG - Chr6:8513033-8513052 None:intergenic 40.0%
CCATGTACATGAGTATGTCT+CGG - Chr6:8512889-8512908 None:intergenic 40.0%
CGTGTTATAAAATAGGGCTG+TGG + Chr6:8512564-8512583 MsG0680030747.01.T01:intron 40.0%
CTAAAACTTGCGGACAATTG+TGG + Chr6:8511824-8511843 MsG0680030747.01.T01:intron 40.0%
CTTGTGCTTAAAGAGAGGAA+TGG + Chr6:8513031-8513050 MsG0680030747.01.T01:CDS 40.0%
GAAATTATTGCCCAAGTTCG+AGG + Chr6:8510841-8510860 MsG0680030747.01.T01:intron 40.0%
TAAAAACTCGCGCTCAATGA+GGG - Chr6:8514685-8514704 None:intergenic 40.0%
TAACTGTGGTTGCGACAATT+TGG + Chr6:8511848-8511867 MsG0680030747.01.T01:intron 40.0%
TAGCAAAGAGGCTTCTTTCA+GGG + Chr6:8513827-8513846 MsG0680030747.01.T01:CDS 40.0%
TATCCACACTCTCGTTCATA+TGG + Chr6:8513336-8513355 MsG0680030747.01.T01:CDS 40.0%
TCAAACCAAGTTCATGAACG+GGG - Chr6:8512943-8512962 None:intergenic 40.0%
TGAGGGTAATGAAATCTAGG+CGG + Chr6:8514565-8514584 MsG0680030747.01.T01:CDS 40.0%
TGGATGACAAACTTCGTAGA+GGG + Chr6:8513695-8513714 MsG0680030747.01.T01:CDS 40.0%
TGTTGTATGGAACAGAGTGT+TGG + Chr6:8510906-8510925 MsG0680030747.01.T01:intron 40.0%
TTAATCATTGTGAGCCCAGA+AGG - Chr6:8513442-8513461 None:intergenic 40.0%
TTGACCTTGTGCTTAAAGAG+AGG + Chr6:8513026-8513045 MsG0680030747.01.T01:CDS 40.0%
TTGCGCATAGTCAACAAACT+AGG + Chr6:8514877-8514896 MsG0680030747.01.T01:three_prime_UTR 40.0%
TTGGCAAGTTTCATCTCGAT+AGG + Chr6:8512285-8512304 MsG0680030747.01.T01:intron 40.0%
TTGTCTCAGATGAGCAGTAA+CGG - Chr6:8512774-8512793 None:intergenic 40.0%
TTGTTAGGGTCACTTCTGTT+TGG + Chr6:8514901-8514920 MsG0680030747.01.T01:three_prime_UTR 40.0%
TTTGGGGAGAAACTTTACTC+TGG + Chr6:8512737-8512756 MsG0680030747.01.T01:CDS 40.0%
! AATCTTCCATCTGAAATCCG+GGG + Chr6:8514078-8514097 MsG0680030747.01.T01:CDS 40.0%
! AGAAATGAACTCTGGAGATC+GGG - Chr6:8513668-8513687 None:intergenic 40.0%
! GTCAACAAACTAGGCTTGTT+AGG + Chr6:8514886-8514905 MsG0680030747.01.T01:three_prime_UTR 40.0%
! GTTGTATGGAACAGAGTGTT+GGG + Chr6:8510907-8510926 MsG0680030747.01.T01:intron 40.0%
! TTATAAGCACCGTGTAGTTG+TGG + Chr6:8510425-8510444 MsG0680030747.01.T01:CDS 40.0%
! TTCAATCGTAGTGGAATTGG+AGG + Chr6:8511209-8511228 MsG0680030747.01.T01:intron 40.0%
! TTTTCTTGGAGGAACTCAAC+AGG + Chr6:8512828-8512847 MsG0680030747.01.T01:CDS 40.0%
!!! GCCTATTCTGTTTTGGTTGT+TGG + Chr6:8512262-8512281 MsG0680030747.01.T01:intron 40.0%
AAAACCCCCGTTCATGAACT+TGG + Chr6:8512935-8512954 MsG0680030747.01.T01:CDS 45.0%
AAATGAGCGTAGAGGAGATG+AGG + Chr6:8510954-8510973 MsG0680030747.01.T01:intron 45.0%
AAGGCTTCTCAAAGTCAGTC+TGG - Chr6:8513126-8513145 None:intergenic 45.0%
AAGTTACGTTGGGCTGTTTG+AGG + Chr6:8512036-8512055 MsG0680030747.01.T01:intron 45.0%
ACAATTGCTGCCTCAATCTG+CGG - Chr6:8514546-8514565 None:intergenic 45.0%
ACATGGGATACGACATACAC+TGG - Chr6:8511626-8511645 None:intergenic 45.0%
ACTGACGTGGCAAGCTAATA+TGG + Chr6:8514152-8514171 MsG0680030747.01.T01:CDS 45.0%
AGAAACTCGACAAAGAGTGG+AGG + Chr6:8514509-8514528 MsG0680030747.01.T01:CDS 45.0%
AGATTGAGGCAGCAATTGTG+AGG + Chr6:8514547-8514566 MsG0680030747.01.T01:CDS 45.0%
AGGGACTGTTGTTGCACAAA+GGG + Chr6:8514467-8514486 MsG0680030747.01.T01:CDS 45.0%
AGGTGCTTACAACAGGTTCA+TGG + Chr6:8514031-8514050 MsG0680030747.01.T01:CDS 45.0%
ATACGACATACACTGGCACA+TGG - Chr6:8511619-8511638 None:intergenic 45.0%
ATGAACCTGTTGTAAGCACC+TGG - Chr6:8514032-8514051 None:intergenic 45.0%
CAAACACATCCTTCTCTTGC+AGG - Chr6:8513786-8513805 None:intergenic 45.0%
CAAACCAAGTTCATGAACGG+GGG - Chr6:8512942-8512961 None:intergenic 45.0%
CACCTCTTCAAGTCTGACAT+GGG - Chr6:8514318-8514337 None:intergenic 45.0%
CCATGCTTTACGTATCACAC+CGG + Chr6:8511924-8511943 MsG0680030747.01.T01:intron 45.0%
CCGAGACATACTCATGTACA+TGG + Chr6:8512886-8512905 MsG0680030747.01.T01:CDS 45.0%
CGATCGAATGTGTGTTTGTC+TGG + Chr6:8511537-8511556 MsG0680030747.01.T01:intron 45.0%
CTAAAAACTCGCGCTCAATG+AGG - Chr6:8514686-8514705 None:intergenic 45.0%
CTAGCAAAGAGGCTTCTTTC+AGG + Chr6:8513826-8513845 MsG0680030747.01.T01:CDS 45.0%
CTCGTTCATATGGAGAACTC+AGG + Chr6:8513346-8513365 MsG0680030747.01.T01:CDS 45.0%
CTGAAAGAAGCCTCTTTGCT+AGG - Chr6:8513828-8513847 None:intergenic 45.0%
CTGACGTGGCAAGCTAATAT+GGG + Chr6:8514153-8514172 MsG0680030747.01.T01:CDS 45.0%
GAAACTTCTCACAAAGACCC+CGG - Chr6:8514098-8514117 None:intergenic 45.0%
GAAGTGGGTAGACCATAACA+AGG + Chr6:8512850-8512869 MsG0680030747.01.T01:CDS 45.0%
GACTTGTAAGGAGATAGAGC+AGG + Chr6:8514281-8514300 MsG0680030747.01.T01:CDS 45.0%
GAGGGTAATGAAATCTAGGC+GGG + Chr6:8514566-8514585 MsG0680030747.01.T01:CDS 45.0%
GATTGAGGCAGCAATTGTGA+GGG + Chr6:8514548-8514567 MsG0680030747.01.T01:CDS 45.0%
GCTCTCACAATGGAAGACTT+AGG - Chr6:8511762-8511781 None:intergenic 45.0%
GGAAGATTACATTGCGGACT+AGG - Chr6:8514066-8514085 None:intergenic 45.0%
GTGGATGACAAACTTCGTAG+AGG + Chr6:8513694-8513713 MsG0680030747.01.T01:CDS 45.0%
TACCCATGTCAGACTTGAAG+AGG + Chr6:8514313-8514332 MsG0680030747.01.T01:CDS 45.0%
TACGACATACACTGGCACAT+GGG - Chr6:8511618-8511637 None:intergenic 45.0%
TAGGGACTGTTGTTGCACAA+AGG + Chr6:8514466-8514485 MsG0680030747.01.T01:CDS 45.0%
TATCCCATGTTCGTGTATCG+TGG + Chr6:8511636-8511655 MsG0680030747.01.T01:CDS 45.0%
TCTCCATATGAACGAGAGTG+TGG - Chr6:8513342-8513361 None:intergenic 45.0%
TGACGTGGCAAGCTAATATG+GGG + Chr6:8514154-8514173 MsG0680030747.01.T01:CDS 45.0%
TGAGTCAGAGATAACTAGCG+TGG + Chr6:8513288-8513307 MsG0680030747.01.T01:CDS 45.0%
TGCATGAGCAAGCAACAATC+CGG - Chr6:8511946-8511965 None:intergenic 45.0%
! ACACATTCGATCGGAAGTGT+CGG - Chr6:8511530-8511549 None:intergenic 45.0%
! CGATTTTGTGCAGCGTCTTT+TGG + Chr6:8513537-8513556 MsG0680030747.01.T01:CDS 45.0%
! GCAGCGTCTTTTGGATTTGA+AGG + Chr6:8513546-8513565 MsG0680030747.01.T01:CDS 45.0%
! GTTCATGAACGGGGGTTTTA+CGG - Chr6:8512934-8512953 None:intergenic 45.0%
! TGCTGATCGGATGACTTGTA+AGG + Chr6:8514269-8514288 MsG0680030747.01.T01:CDS 45.0%
! TGTTTCGTAGGGTACCTTCT+GGG + Chr6:8513425-8513444 MsG0680030747.01.T01:CDS 45.0%
! TTGTTTCGTAGGGTACCTTC+TGG + Chr6:8513424-8513443 MsG0680030747.01.T01:CDS 45.0%
!! AGTCGTTGGCCTTAGTCAAA+GGG + Chr6:8514343-8514362 MsG0680030747.01.T01:CDS 45.0%
!! GGAGAGAGTATCTCACTACT+TGG + Chr6:8513255-8513274 MsG0680030747.01.T01:CDS 45.0%
!! TGAGCGCGAGTTTTTAGAGA+GGG + Chr6:8514689-8514708 MsG0680030747.01.T01:CDS 45.0%
!! TTGAGCGCGAGTTTTTAGAG+AGG + Chr6:8514688-8514707 MsG0680030747.01.T01:CDS 45.0%
!!! TGAAGGTAGTTTTGGTGCAG+TGG + Chr6:8511683-8511702 MsG0680030747.01.T01:CDS 45.0%
!!! ACTAATTTTTTTTATTTAAA+CGG - Chr6:8511285-8511304 None:intergenic 5.0%
AGACAGAAAGCCGCAGATTG+AGG + Chr6:8514533-8514552 MsG0680030747.01.T01:CDS 50.0%
AGACGCTGCACAAAATCGAC+AGG - Chr6:8513535-8513554 None:intergenic 50.0%
AGCACCTGGACAGATAGTGT+AGG - Chr6:8514018-8514037 None:intergenic 50.0%
AGGAGATGAGGATGTTGCGT+TGG + Chr6:8510966-8510985 MsG0680030747.01.T01:intron 50.0%
AGGATGTTGCGTTGGATGTG+TGG + Chr6:8510974-8510993 MsG0680030747.01.T01:intron 50.0%
AGGGAAGACTGTATCCGATG+AGG + Chr6:8513846-8513865 MsG0680030747.01.T01:CDS 50.0%
CAAAGACCCCGGATTTCAGA+TGG - Chr6:8514087-8514106 None:intergenic 50.0%
CATCCTTCTCTTGCAGGTAC+CGG - Chr6:8513780-8513799 None:intergenic 50.0%
CCGGTGTGATACGTAAAGCA+TGG - Chr6:8511927-8511946 None:intergenic 50.0%
CGGACAATTGTGGCTAACTG+TGG + Chr6:8511834-8511853 MsG0680030747.01.T01:intron 50.0%
CGTAGAGGGATAAAAGGGGT+TGG + Chr6:8513709-8513728 MsG0680030747.01.T01:CDS 50.0%
GCACCTCTTCAAGTCTGACA+TGG - Chr6:8514319-8514338 None:intergenic 50.0%
GCACCTGGACAGATAGTGTA+GGG - Chr6:8514017-8514036 None:intergenic 50.0%
GGACCACGATACACGAACAT+GGG - Chr6:8511642-8511661 None:intergenic 50.0%
GGAGGAACTCAACAGGAAGT+GGG + Chr6:8512835-8512854 MsG0680030747.01.T01:CDS 50.0%
GTCAGAGATAACTAGCGTGG+TGG + Chr6:8513291-8513310 MsG0680030747.01.T01:CDS 50.0%
TAGCCCTACACTATCTGTCC+AGG + Chr6:8514011-8514030 MsG0680030747.01.T01:CDS 50.0%
TATTATCTCGGCGCTCACAG+TGG + Chr6:8514123-8514142 MsG0680030747.01.T01:CDS 50.0%
TCTGTCCAGGTGCTTACAAC+AGG + Chr6:8514024-8514043 MsG0680030747.01.T01:CDS 50.0%
TGACTAAGGCCAACGACTGA+AGG - Chr6:8514341-8514360 None:intergenic 50.0%
TGGACCACGATACACGAACA+TGG - Chr6:8511643-8511662 None:intergenic 50.0%
TGGAGGAACTCAACAGGAAG+TGG + Chr6:8512834-8512853 MsG0680030747.01.T01:CDS 50.0%
TTGTGTGACTTCGAGGTCGT+TGG + Chr6:8511718-8511737 MsG0680030747.01.T01:intron 50.0%
TTTCCGGTACCTGCAAGAGA+AGG + Chr6:8513774-8513793 MsG0680030747.01.T01:CDS 50.0%
! AGCATCTCATGGTGCTGAGT+TGG + Chr6:8513984-8514003 MsG0680030747.01.T01:CDS 50.0%
! GCATCTCATGGTGCTGAGTT+GGG + Chr6:8513985-8514004 MsG0680030747.01.T01:CDS 50.0%
! GTTGCTGTTGTGTGACTTCG+AGG + Chr6:8511711-8511730 MsG0680030747.01.T01:intron 50.0%
!! AGGGATAAAAGGGGTTGGTG+AGG + Chr6:8513714-8513733 MsG0680030747.01.T01:CDS 50.0%
!! CAGTCGTTGGCCTTAGTCAA+AGG + Chr6:8514342-8514361 MsG0680030747.01.T01:CDS 50.0%
!! CATTGCGGACTAGGTTGAGT+TGG - Chr6:8514057-8514076 None:intergenic 50.0%
!! GATAAAAGGGGTTGGTGAGG+AGG + Chr6:8513717-8513736 MsG0680030747.01.T01:CDS 50.0%
!! GTATGGAACAGAGTGTTGGG+TGG + Chr6:8510910-8510929 MsG0680030747.01.T01:intron 50.0%
!! TTCATCTCGATAGGCATCGG+TGG + Chr6:8512294-8512313 MsG0680030747.01.T01:intron 50.0%
!!! GGTAGTTTTGGTGCAGTGGA+TGG + Chr6:8511687-8511706 MsG0680030747.01.T01:CDS 50.0%
ACAGTGGTAGGAGACTGACG+TGG + Chr6:8514139-8514158 MsG0680030747.01.T01:CDS 55.0%
! ACGGGGGTTTTACGGTTGCT+TGG - Chr6:8512926-8512945 None:intergenic 55.0%
!! GAAGAGGTGCCTTCAGTCGT+TGG + Chr6:8514329-8514348 MsG0680030747.01.T01:CDS 55.0%
ATCTCGGCGCTCACAGTGGT+AGG + Chr6:8514127-8514146 MsG0680030747.01.T01:CDS 60.0%
CTGCAGCTGCTTCGTGACCT+CGG - Chr6:8514616-8514635 None:intergenic 60.0%
CGAGGTCACGAAGCAGCTGC+AGG + Chr6:8514614-8514633 MsG0680030747.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 8510396 8515001 8510396 ID=MsG0680030747.01;Name=MsG0680030747.01
Chr6 mRNA 8510396 8515001 8510396 ID=MsG0680030747.01.T01;Parent=MsG0680030747.01;Name=MsG0680030747.01.T01;_AED=0.48;_eAED=0.50;_QI=0|0|0.33|1|1|1|3|252|763
Chr6 exon 8510396 8510551 8510396 ID=MsG0680030747.01.T01:exon:7153;Parent=MsG0680030747.01.T01
Chr6 exon 8511627 8511721 8511627 ID=MsG0680030747.01.T01:exon:7154;Parent=MsG0680030747.01.T01
Chr6 exon 8512709 8515001 8512709 ID=MsG0680030747.01.T01:exon:7155;Parent=MsG0680030747.01.T01
Chr6 CDS 8510396 8510551 8510396 ID=MsG0680030747.01.T01:cds;Parent=MsG0680030747.01.T01
Chr6 CDS 8511627 8511721 8511627 ID=MsG0680030747.01.T01:cds;Parent=MsG0680030747.01.T01
Chr6 CDS 8512709 8514749 8512709 ID=MsG0680030747.01.T01:cds;Parent=MsG0680030747.01.T01
Chr6 three_prime_UTR 8514750 8515001 8514750 ID=MsG0680030747.01.T01:three_prime_utr;Parent=MsG0680030747.01.T01
Gene Sequence

>MsG0680030747.01.T01

ATGAAGAAGAAAGCAATCGTGATTGAAGCTTATAAGCACCGTGTAGTTGTGGATCCTAACTACGCTGAAAAAACTTGGAAGCTTCTTGAACATGCTATTCATGAGATTTACAATCGTAACGCTAGTGGACTCAGCTTTGAAGAGCTTTATAGGTTGTGTATGTCGTATCCCATGTTCGTGTATCGTGGTCCATACTATCTGAGTCATGAACATGAAGGTAGTTTTGGTGCAGTGGATGGAGTTGCTGTTGTGAATGCTTATAATATGGTGCTACATAAATTTGGGGAGAAACTTTACTCTGGACTTGTGAAGACCGTTACTGCTCATCTGAGACAAATTTCTCAATCAATCAAAGCTGCTCAAGGAGATATTTTCTTGGAGGAACTCAACAGGAAGTGGGTAGACCATAACAAGGCATTGCAAATGATCCGAGACATACTCATGTACATGGATCGAACTTTCGTACCAAGCAACCGTAAAACCCCCGTTCATGAACTTGGTTTGAATCTATGGAGAGATGTTGTGATCCATTCTAACGAAACTAAGACTAGGCTTCTAGATACACTTCTTGACCTTGTGCTTAAAGAGAGGAATGGTGAAGTTATTAACAGAGGCTTGATGAGGAACTTAATTAAGATGCTGACGGATTTGGGTTTGTCTGTTTACCAGACTGACTTTGAGAAGCCTTTTATTCAAGTTTCTACAAATTTTTATTGTTGTGAGTCCCAAAAATTAATTGAATCATGTGATTGTGGTGATTATCTGAAGAAAGCTGAGAGGCGTTTAAATGAAGAAATGGAGAGAGTATCTCACTACTTGGATTCTAGCAGTGAGTCAGAGATAACTAGCGTGGTGGTCAAACAGATGATTGAAAAACATATCCACACTCTCGTTCATATGGAGAACTCAGGCCTAGTTAATATGCTCATTGATGACAAATATGATGACTTGGAAAGAATGTATAACTTGTTTCGTAGGGTACCTTCTGGGCTCACAATGATTAAAGATGTCATGACTTCTTTTATACGGGATACTGGTAAGCAGTTAATTATGGATCCTGAAAGGTTGAAAGATCCTGTCGATTTTGTGCAGCGTCTTTTGGATTTGAAGGATAAATATGACAAAGTTATCACAACGGCGTTTGCCAATGACAAGTCATTTCAGAATGCCTTGAATTCTGCATTTGAATATTTCATCAATTTGAGTGCCCGATCTCCAGAGTTCATTTCTTTGTTTGTGGATGACAAACTTCGTAGAGGGATAAAAGGGGTTGGTGAGGAGGATGTAGAGATTGTACTAGACAAAGTCATGATGCTTTTCCGGTACCTGCAAGAGAAGGATGTGTTTGAGAAGTATTATAAGCAACACCTAGCAAAGAGGCTTCTTTCAGGGAAGACTGTATCCGATGAGGCAGAAAGAAGTTTGATTCTTAAGCTCAAAACAGAATGTGGATATCAATTCACTTCTAAGTTAGAGGGTATGTTTACAGATATGAAGACTTCTTATGATATGATGCAAGGTTTCTTAGCATCTCATGGTGCTGAGTTGGGAGATAGCCCTACACTATCTGTCCAGGTGCTTACAACAGGTTCATGGCCAACTCAACCTAGTCCGCAATGTAATCTTCCATCTGAAATCCGGGGTCTTTGTGAGAAGTTTCGTAGTTATTATCTCGGCGCTCACAGTGGTAGGAGACTGACGTGGCAAGCTAATATGGGGAATGCTGATTTAAAGGCTACATTTGGTAAGGGCCAGAAGCATGAGCTGAATGTTTCTACATACCAGATGTGTGTACTAATGCTTTTCAACAATGCTGATCGGATGACTTGTAAGGAGATAGAGCAGGCTACAGCAATACCCATGTCAGACTTGAAGAGGTGCCTTCAGTCGTTGGCCTTAGTCAAAGGGAAAAATGTTCTTCGGAAAGAGCCAATGAGCAAGGACATATCTGAAGATGATGTGTTCTTTTTCAATGAAAAATTCACTAGCAAGCTCTTCAAGGTAAAAATAGGGACTGTTGTTGCACAAAGGGAGACTGAACCAGAAAATATAGAAACTCGACAAAGAGTGGAGGAAGACAGAAAGCCGCAGATTGAGGCAGCAATTGTGAGGGTAATGAAATCTAGGCGGGTTTTAGAACATAATAATGTCATCGCCGAGGTCACGAAGCAGCTGCAGGCGCGATTTTTGCCTAATCCTGTTGTTATTAAAAAGCGGATTGAATCCCTCATTGAGCGCGAGTTTTTAGAGAGGGATAAAGTGGACAGAAAATTGTACCGCTATCTTGCTTGA
Protein sequence

>MsG0680030747.01.T01

MKKKAIVIEAYKHRVVVDPNYAEKTWKLLEHAIHEIYNRNASGLSFEELYRLCMSYPMFVYRGPYYLSHEHEGSFGAVDGVAVVNAYNMVLHKFGEKLYSGLVKTVTAHLRQISQSIKAAQGDIFLEELNRKWVDHNKALQMIRDILMYMDRTFVPSNRKTPVHELGLNLWRDVVIHSNETKTRLLDTLLDLVLKERNGEVINRGLMRNLIKMLTDLGLSVYQTDFEKPFIQVSTNFYCCESQKLIESCDCGDYLKKAERRLNEEMERVSHYLDSSSESEITSVVVKQMIEKHIHTLVHMENSGLVNMLIDDKYDDLERMYNLFRRVPSGLTMIKDVMTSFIRDTGKQLIMDPERLKDPVDFVQRLLDLKDKYDKVITTAFANDKSFQNALNSAFEYFINLSARSPEFISLFVDDKLRRGIKGVGEEDVEIVLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDEAERSLILKLKTECGYQFTSKLEGMFTDMKTSYDMMQGFLASHGAELGDSPTLSVQVLTTGSWPTQPSPQCNLPSEIRGLCEKFRSYYLGAHSGRRLTWQANMGNADLKATFGKGQKHELNVSTYQMCVLMLFNNADRMTCKEIEQATAIPMSDLKRCLQSLALVKGKNVLRKEPMSKDISEDDVFFFNEKFTSKLFKVKIGTVVAQRETEPENIETRQRVEEDRKPQIEAAIVRVMKSRRVLEHNNVIAEVTKQLQARFLPNPVVIKKRIESLIEREFLERDKVDRKLYRYLA*