AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043532.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043532.01.T01 MTR_8g037810 89.105 257 17 1 56 301 83 339 3.33e-160 450
MsG0880043532.01.T01 MTR_1g029470 54.839 217 93 2 64 275 91 307 3.77e-69 219
MsG0880043532.01.T01 MTR_1g029460 51.376 218 100 3 64 275 91 308 4.46e-61 199
MsG0880043532.01.T01 MTR_5g004570 55.072 138 53 2 64 192 91 228 9.22e-43 147
MsG0880043532.01.T01 MTR_5g004600 52.174 92 42 1 191 280 4 95 3.75e-22 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043532.01.T01 AT4G39150 63.320 259 82 2 56 301 83 341 4.68e-113 330
MsG0880043532.01.T01 AT4G39150 63.320 259 82 2 56 301 83 341 4.68e-113 330
MsG0880043532.01.T01 AT4G39150 63.320 259 82 2 56 301 83 341 4.68e-113 330
MsG0880043532.01.T01 AT2G21510 62.692 260 83 3 56 301 83 342 1.74e-108 319
MsG0880043532.01.T01 AT2G21510 62.692 260 83 3 56 301 83 342 1.74e-108 319
MsG0880043532.01.T01 AT2G21510 61.049 267 83 4 56 301 83 349 1.25e-105 312
MsG0880043532.01.T01 AT2G21510 61.049 267 83 4 56 301 83 349 1.25e-105 312
MsG0880043532.01.T01 AT2G21510 64.407 236 71 2 56 278 83 318 7.09e-102 301
MsG0880043532.01.T01 AT1G21080 50.420 238 106 4 64 290 3 239 8.41e-69 216
MsG0880043532.01.T01 AT1G21080 50.420 238 106 4 64 290 90 326 8.50e-68 216
MsG0880043532.01.T01 AT1G21080 50.420 238 106 4 64 290 90 326 8.53e-68 217
MsG0880043532.01.T01 AT1G76700 52.632 228 96 5 64 280 91 317 1.49e-65 211
MsG0880043532.01.T01 AT1G77020 50.877 228 99 4 64 280 91 316 2.81e-64 207

Find 77 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTATGAACGTCCCCTTCT+TGG 0.203191 8:-26235152 MsG0880043532.01.T01:CDS
ATGGACCCTACAACTGTATT+TGG 0.220684 8:-26237217 MsG0880043532.01.T01:CDS
CCGTCACTTGTGACTTTATA+CGG 0.231978 8:+26235104 None:intergenic
ATCATGTTCTTGTGGCCTTC+TGG 0.240195 8:-26234143 MsG0880043532.01.T01:three_prime_UTR
AACTGTATTTGGAATGCTTT+TGG 0.257050 8:-26237206 MsG0880043532.01.T01:CDS
AAAATTGACTAAGGAAAATT+TGG 0.257711 8:+26238402 None:intergenic
GCCCAATGAAATAGGAATTT+AGG 0.268447 8:+26233908 None:intergenic
TTTCACTTTGACTTGTGAAT+TGG 0.282563 8:-26234020 MsG0880043532.01.T01:three_prime_UTR
CTTAAGGCGATGGGTAAATT+TGG 0.286039 8:-26238464 None:intergenic
ATGCCATGATTAATTCCTTA+TGG 0.294708 8:-26234883 MsG0880043532.01.T01:CDS
CTTGTTCAGTTTGCTCAGTA+TGG 0.296516 8:-26234181 MsG0880043532.01.T01:three_prime_UTR
TCCCAACTGTTTCAATGCTT+TGG 0.299675 8:+26234434 None:intergenic
ATCCTAAATTCCTATTTCAT+TGG 0.303658 8:-26233910 MsG0880043532.01.T01:three_prime_UTR
TATCCTCTGCCCAATGAAAT+AGG 0.304180 8:+26233900 None:intergenic
GAGAAGAAGAATTTACAAAA+TGG 0.335589 8:-26236891 MsG0880043532.01.T01:CDS
CGTTTGCAACCATTTGTTGA+TGG 0.347187 8:-26236916 MsG0880043532.01.T01:CDS
TAGCAGTAGGTGGGAGTTAG+AGG 0.356215 8:-26237448 MsG0880043532.01.T01:intron
AAGAGCTTGGAAAGGATATT+CGG 0.361247 8:-26235174 MsG0880043532.01.T01:CDS
TTACAATAGAAGAAAGAAAC+AGG 0.363609 8:+26234101 None:intergenic
TCACAAGTGACGGCAGCTTC+AGG 0.368911 8:-26235094 MsG0880043532.01.T01:intron
CCGAGACACCAGAACGTCTT+TGG 0.391989 8:+26234458 None:intergenic
TCCTAAATTCCTATTTCATT+GGG 0.392333 8:-26233909 MsG0880043532.01.T01:three_prime_UTR
CCAAAGACGTTCTGGTGTCT+CGG 0.400902 8:-26234458 MsG0880043532.01.T01:CDS
AGCATTCCAAATACAGTTGT+AGG 0.431003 8:+26237211 None:intergenic
TCTTCTCGGCCATCAACAAA+TGG 0.447880 8:+26236907 None:intergenic
CTTACATGCAGAATGGACTA+TGG 0.450476 8:+26233994 None:intergenic
TGCATACGAACTTGAGGCTC+CGG 0.463592 8:+26237107 None:intergenic
AGAAGAAGAATTTACAAAAT+GGG 0.464479 8:-26236890 MsG0880043532.01.T01:CDS
CAAAGACGTTCTGGTGTCTC+GGG 0.475363 8:-26234457 MsG0880043532.01.T01:CDS
GGCCAAAGCATTGAAACAGT+TGG 0.482739 8:-26234436 MsG0880043532.01.T01:CDS
AAGTGTGTCCAAAGACGTTC+TGG 0.485022 8:-26234466 MsG0880043532.01.T01:CDS
GCTCGTAATCTTTCAAAAGC+TGG 0.485258 8:-26236856 MsG0880043532.01.T01:intron
TTGGGCAGAGGATATGTAGA+TGG 0.487217 8:-26233891 MsG0880043532.01.T01:three_prime_UTR
TCGGACCCACTCGGCCAAGA+AGG 0.488488 8:+26235138 None:intergenic
CGGACCCACTCGGCCAAGAA+GGG 0.489740 8:+26235139 None:intergenic
AATGACATTAATCTTCCATA+AGG 0.489818 8:+26234868 None:intergenic
GCCAAAGCATTGAAACAGTT+GGG 0.490202 8:-26234435 MsG0880043532.01.T01:CDS
AATGACAAGCAGGTGGAAGC+TGG 0.494158 8:-26234221 MsG0880043532.01.T01:CDS
AAGAGAACAGAAGCTGATAT+CGG 0.494342 8:-26236950 MsG0880043532.01.T01:CDS
GAAAGCTCTTGAAGATAAGA+AGG 0.500121 8:-26234906 MsG0880043532.01.T01:CDS
TTATACGGTGTCCTTTGTCT+CGG 0.503645 8:+26235119 None:intergenic
GCTCTGACCAAAATTGACTA+AGG 0.504419 8:+26238393 None:intergenic
CGTCCCCTTCTTGGCCGAGT+GGG 0.504973 8:-26235143 MsG0880043532.01.T01:CDS
CGAAAAGCAGCAAAAGAGCT+TGG 0.510724 8:-26235187 MsG0880043532.01.T01:CDS
CTTCCATAAGGAATTAATCA+TGG 0.512807 8:+26234880 None:intergenic
AAACTAGGTACTGATATTGA+TGG 0.515980 8:-26238428 MsG0880043532.01.T01:CDS
TTTAGCATCTATAGAAGTTG+AGG 0.524735 8:-26237138 MsG0880043532.01.T01:CDS
AGAACGTCTTTGGACACACT+TGG 0.530750 8:+26234468 None:intergenic
GGTCGCAAACGACTTAAACT+AGG 0.533922 8:-26238443 MsG0880043532.01.T01:CDS
ATTCCTATTTCATTGGGCAG+AGG 0.536939 8:-26233903 MsG0880043532.01.T01:three_prime_UTR
TTGAGTTGATCATGTTCTTG+TGG 0.540154 8:-26234151 MsG0880043532.01.T01:three_prime_UTR
TCCTTTGTCTCGGACCCACT+CGG 0.542401 8:+26235129 None:intergenic
AGTCAAGAGTCAAATTCCTC+TGG 0.545435 8:-26237388 MsG0880043532.01.T01:intron
CTAGAAACTTACATGCAGAA+TGG 0.552941 8:+26233987 None:intergenic
CATCAACAAATGGTTGCAAA+CGG 0.554325 8:+26236917 None:intergenic
TACAGTTGTAGGGTCCATCA+TGG 0.554550 8:+26237222 None:intergenic
GAGCTCAAGAAGCTAAATCA+AGG 0.558223 8:-26234953 MsG0880043532.01.T01:CDS
GCCGAGTGGGTCCGAGACAA+AGG 0.559832 8:-26235130 MsG0880043532.01.T01:CDS
AGCAGTAGGTGGGAGTTAGA+GGG 0.565291 8:-26237447 MsG0880043532.01.T01:intron
AGAAGTTGAGGAAGATTCAC+CGG 0.567208 8:-26237126 MsG0880043532.01.T01:CDS
GCATTCCAAATACAGTTGTA+GGG 0.573160 8:+26237212 None:intergenic
GGACCCACTCGGCCAAGAAG+GGG 0.573409 8:+26235140 None:intergenic
GAGGCCATGCTACATACAAT+CGG 0.573820 8:-26235223 MsG0880043532.01.T01:CDS
TGGATGGACATTCTGTGGAT+TGG 0.576617 8:-26233871 MsG0880043532.01.T01:three_prime_UTR
ACGCCGAGAAAATGACAAGC+AGG 0.587293 8:-26234231 MsG0880043532.01.T01:CDS
AAATTTCATTTAGAGCCAGA+AGG 0.589267 8:+26234128 None:intergenic
GCAGAGGATATGTAGATGGA+TGG 0.590954 8:-26233887 MsG0880043532.01.T01:three_prime_UTR
GCAGTAGGTGGGAGTTAGAG+GGG 0.608400 8:-26237446 MsG0880043532.01.T01:intron
AATGAAATAGGAATTTAGGA+TGG 0.610963 8:+26233912 None:intergenic
CCGTATAAAGTCACAAGTGA+CGG 0.619727 8:-26235104 MsG0880043532.01.T01:CDS
AGCAGCAAAAGAGCTTGGAA+AGG 0.622250 8:-26235182 MsG0880043532.01.T01:CDS
ACGTCCCCTTCTTGGCCGAG+TGG 0.626832 8:-26235144 MsG0880043532.01.T01:CDS
TGAACAAGATGATTATGATG+AGG 0.639505 8:+26234196 None:intergenic
ATAACCGATTGTATGTAGCA+TGG 0.649437 8:+26235219 None:intergenic
CCGAGAAAATGACAAGCAGG+TGG 0.650064 8:-26234228 MsG0880043532.01.T01:CDS
GTAGATGGATGGACATTCTG+TGG 0.660797 8:-26233876 MsG0880043532.01.T01:three_prime_UTR
TACAATAGAAGAAAGAAACA+GGG 0.692547 8:+26234102 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATGTAAATGATGTTATT+AGG - Chr8:26236493-26236512 MsG0880043532.01.T01:intron 15.0%
!! AGCATAAAAATAATACATAT+TGG + Chr8:26236450-26236469 None:intergenic 15.0%
!! GCATAAAAATAATACATATT+GGG + Chr8:26236449-26236468 None:intergenic 15.0%
!! TAGAATAAATACTTGAATTA+TGG + Chr8:26237656-26237675 None:intergenic 15.0%
!! TGTTAATTATAGTAGAATTT+GGG - Chr8:26234245-26234264 MsG0880043532.01.T01:CDS 15.0%
!!! AAAGCTATATTACTTTTAAT+TGG - Chr8:26238234-26238253 MsG0880043532.01.T01:intron 15.0%
!!! TTTTATAGCTTATTTAGAAA+AGG + Chr8:26236637-26236656 None:intergenic 15.0%
!! AAAATTGACTAAGGAAAATT+TGG + Chr8:26233890-26233909 None:intergenic 20.0%
!! AAATATGTATGATAAAATCC+TGG + Chr8:26236924-26236943 None:intergenic 20.0%
!! AGAAGAAGAATTTACAAAAT+GGG - Chr8:26235399-26235418 MsG0880043532.01.T01:intron 20.0%
!! ATATCTTGAAAATAGTAAGA+AGG - Chr8:26236190-26236209 MsG0880043532.01.T01:intron 20.0%
!! ATCATATTTAGAAATTGGAA+CGG - Chr8:26236401-26236420 MsG0880043532.01.T01:intron 20.0%
!! GAAAAATTCCATTTATTATC+TGG + Chr8:26235737-26235756 None:intergenic 20.0%
!! GAATTCAAGGTTTAAAAAAA+TGG + Chr8:26237623-26237642 None:intergenic 20.0%
!! GTGTTAATTATAGTAGAATT+TGG - Chr8:26234244-26234263 MsG0880043532.01.T01:CDS 20.0%
!! TAAACTTCTTAAACTTTAGA+AGG + Chr8:26234194-26234213 None:intergenic 20.0%
!! TAAGATGTTAACAAAATTCA+AGG + Chr8:26237026-26237045 None:intergenic 20.0%
!! TATTTATTCTACAAACAACT+TGG - Chr8:26237665-26237684 MsG0880043532.01.T01:intron 20.0%
!! TCCAATTTCTAAATATGATT+GGG + Chr8:26236400-26236419 None:intergenic 20.0%
!! TCTAATATTAAATTATGCTC+CGG + Chr8:26237732-26237751 None:intergenic 20.0%
!! TTACCAACTAATTAACTATT+GGG + Chr8:26234791-26234810 None:intergenic 20.0%
!! TTATGAATTAACTAGCAAAA+AGG - Chr8:26234211-26234230 MsG0880043532.01.T01:CDS 20.0%
!! TTATTGCAAGAATATAATTC+TGG + Chr8:26234945-26234964 None:intergenic 20.0%
!! TTCCAATTTCTAAATATGAT+TGG + Chr8:26236401-26236420 None:intergenic 20.0%
!! TTCTTGTAGTTATTACATTT+AGG - Chr8:26236558-26236577 MsG0880043532.01.T01:intron 20.0%
!! TTTACCAACTAATTAACTAT+TGG + Chr8:26234792-26234811 None:intergenic 20.0%
!!! AAATCCATGTTTTTGAATTA+AGG + Chr8:26237598-26237617 None:intergenic 20.0%
!!! AAATTTTCCTTAGTCAATTT+TGG - Chr8:26233889-26233908 MsG0880043532.01.T01:three_prime_UTR 20.0%
!!! AAGTTGTACTAAATTTTAGT+TGG + Chr8:26233940-26233959 None:intergenic 20.0%
!!! ATAATTCTGGAAAATACAAT+TGG + Chr8:26234932-26234951 None:intergenic 20.0%
!!! ATCCAGAAATTTTAATAAGT+GGG - Chr8:26236753-26236772 MsG0880043532.01.T01:intron 20.0%
!!! ATTTTGTAAATTCTTCTTCT+CGG + Chr8:26235399-26235418 None:intergenic 20.0%
!!! CAAAATGAAATTTTTCAAGT+AGG + Chr8:26237575-26237594 None:intergenic 20.0%
!!! TTTTTTAAACCTTGAATTCA+TGG - Chr8:26237624-26237643 MsG0880043532.01.T01:intron 20.0%
! AAACAGACCTTCTATATAAT+TGG + Chr8:26236142-26236161 None:intergenic 25.0%
! AATGAAATAGGAATTTAGGA+TGG + Chr8:26238380-26238399 None:intergenic 25.0%
! AATGACATTAATCTTCCATA+AGG + Chr8:26237424-26237443 None:intergenic 25.0%
! AATTATAGTAGAATTTGGGA+AGG - Chr8:26234249-26234268 MsG0880043532.01.T01:CDS 25.0%
! ACATAAAAATCACTCAACAT+TGG + Chr8:26236001-26236020 None:intergenic 25.0%
! ACATAGATAGTATCATGATA+TGG - Chr8:26236240-26236259 MsG0880043532.01.T01:intron 25.0%
! AGCTTATTTAGAAAAGGAAA+AGG + Chr8:26236631-26236650 None:intergenic 25.0%
! AGTTAATACATTGACATGTA+TGG + Chr8:26236076-26236095 None:intergenic 25.0%
! ATCCTAAATTCCTATTTCAT+TGG - Chr8:26238379-26238398 MsG0880043532.01.T01:intron 25.0%
! ATTAGGATTCTTATTGTGTT+GGG - Chr8:26235921-26235940 MsG0880043532.01.T01:intron 25.0%
! ATTATAGTAGAATTTGGGAA+GGG - Chr8:26234250-26234269 MsG0880043532.01.T01:CDS 25.0%
! CATAAAAATCACTCAACATT+GGG + Chr8:26236000-26236019 None:intergenic 25.0%
! GAGAAGAAGAATTTACAAAA+TGG - Chr8:26235398-26235417 MsG0880043532.01.T01:intron 25.0%
! TACAATAGAAGAAAGAAACA+GGG + Chr8:26238190-26238209 None:intergenic 25.0%
! TATCAAATAAAGACCTGAAT+AGG - Chr8:26233989-26234008 MsG0880043532.01.T01:three_prime_UTR 25.0%
! TATTAGGATTCTTATTGTGT+TGG - Chr8:26235920-26235939 MsG0880043532.01.T01:intron 25.0%
! TCCCAATCATATTTAGAAAT+TGG - Chr8:26236396-26236415 MsG0880043532.01.T01:intron 25.0%
! TCCTAAATTCCTATTTCATT+GGG - Chr8:26238380-26238399 MsG0880043532.01.T01:intron 25.0%
! TTACAATAGAAGAAAGAAAC+AGG + Chr8:26238191-26238210 None:intergenic 25.0%
! TTCTGTTGTATATTGAATGA+TGG - Chr8:26235481-26235500 MsG0880043532.01.T01:intron 25.0%
! TTCTTCATCCAGATAATAAA+TGG - Chr8:26235726-26235745 MsG0880043532.01.T01:intron 25.0%
! TTTGCCTTAATTCAAAAACA+TGG - Chr8:26237591-26237610 MsG0880043532.01.T01:intron 25.0%
!! ATAACATAGCTACGTTTTTA+AGG + Chr8:26234346-26234365 None:intergenic 25.0%
!! ATTTGAAGATTTTGTGCAAA+TGG - Chr8:26236315-26236334 MsG0880043532.01.T01:intron 25.0%
!! ATTTTTATGGACATTTTGCA+AGG - Chr8:26234869-26234888 MsG0880043532.01.T01:CDS 25.0%
!! CTTACATTATTTTCAGCTTT+TGG - Chr8:26237042-26237061 MsG0880043532.01.T01:intron 25.0%
!! CTTTTGAATTACATATCTAC+TGG + Chr8:26236901-26236920 None:intergenic 25.0%
!! GTGAACAAACAATTTTTCTA+AGG + Chr8:26236985-26237004 None:intergenic 25.0%
!! TCATGATACTATCTATGTTT+TGG + Chr8:26236238-26236257 None:intergenic 25.0%
!! TTATATAGAAGGTCTGTTTT+TGG - Chr8:26236143-26236162 MsG0880043532.01.T01:intron 25.0%
!!! AAATTTTGATCTAATCTCAC+CGG - Chr8:26236110-26236129 MsG0880043532.01.T01:intron 25.0%
!!! ATACTCTTGTTATTTTTCTC+AGG - Chr8:26237787-26237806 MsG0880043532.01.T01:intron 25.0%
!!! ATTTTTATGCTCTAGTTTGA+GGG - Chr8:26236459-26236478 MsG0880043532.01.T01:intron 25.0%
!!! CGAGTTTAATTTTTAAGCTA+TGG + Chr8:26237504-26237523 None:intergenic 25.0%
!!! GAATTTTTCGAAGAGTATAT+TGG - Chr8:26235110-26235129 MsG0880043532.01.T01:CDS 25.0%
!!! GATCCAGAAATTTTAATAAG+TGG - Chr8:26236752-26236771 MsG0880043532.01.T01:intron 25.0%
!!! GTACTAAATTTTGGTTCATT+TGG - Chr8:26234074-26234093 MsG0880043532.01.T01:three_prime_UTR 25.0%
!!! TAATTAGTTGGTAAATTGTC+AGG - Chr8:26234797-26234816 MsG0880043532.01.T01:intron 25.0%
!!! TATATAGAAGGTCTGTTTTT+GGG - Chr8:26236144-26236163 MsG0880043532.01.T01:intron 25.0%
!!! TATTTTTATGCTCTAGTTTG+AGG - Chr8:26236458-26236477 MsG0880043532.01.T01:intron 25.0%
!!! TCCAGAAATTTTAATAAGTG+GGG - Chr8:26236754-26236773 MsG0880043532.01.T01:intron 25.0%
AAAAATTGTTTGTTCACTCC+TGG - Chr8:26236988-26237007 MsG0880043532.01.T01:intron 30.0%
AACTGTTTGAACAATTGTCT+TGG + Chr8:26236292-26236311 None:intergenic 30.0%
AATAAGTACACAAGTGATTG+AGG + Chr8:26236266-26236285 None:intergenic 30.0%
ACCCCACTTATTAAAATTTC+TGG + Chr8:26236758-26236777 None:intergenic 30.0%
AGAGTAATAAAACTGTTGAG+AGG + Chr8:26236952-26236971 None:intergenic 30.0%
AGATATGTAATTCAAAAGCC+AGG - Chr8:26236903-26236922 MsG0880043532.01.T01:CDS 30.0%
AGATGACTTATCCGAAAATT+GGG - Chr8:26234558-26234577 MsG0880043532.01.T01:intron 30.0%
ATATTTAGAAATTGGAACGG+AGG - Chr8:26236404-26236423 MsG0880043532.01.T01:intron 30.0%
ATGCCATGATTAATTCCTTA+TGG - Chr8:26237406-26237425 MsG0880043532.01.T01:CDS 30.0%
CAACAGAATTACAGAACAAA+CGG + Chr8:26235469-26235488 None:intergenic 30.0%
CAATCACTTGTGTACTTATT+TGG - Chr8:26236266-26236285 MsG0880043532.01.T01:intron 30.0%
CTATCAGTAGTTGGATTATT+AGG - Chr8:26235904-26235923 MsG0880043532.01.T01:intron 30.0%
CTTCCATAAGGAATTAATCA+TGG + Chr8:26237412-26237431 None:intergenic 30.0%
GAACCCAATAGTTAATTAGT+TGG - Chr8:26234785-26234804 MsG0880043532.01.T01:intron 30.0%
GCTAAACTTTACAACCAAAA+TGG - Chr8:26236703-26236722 MsG0880043532.01.T01:intron 30.0%
GGCATTTGTATGTGATAAAT+GGG - Chr8:26236336-26236355 MsG0880043532.01.T01:intron 30.0%
TACAGAGAAAAAGCTGATAA+GGG + Chr8:26234416-26234435 None:intergenic 30.0%
TAGTTATTACATTTAGGCTC+AGG - Chr8:26236564-26236583 MsG0880043532.01.T01:intron 30.0%
TGAACAAGATGATTATGATG+AGG + Chr8:26238096-26238115 None:intergenic 30.0%
TGGCATTTGTATGTGATAAA+TGG - Chr8:26236335-26236354 MsG0880043532.01.T01:intron 30.0%
TGTTAACAAAATTCAAGGAG+TGG + Chr8:26237021-26237040 None:intergenic 30.0%
TTCCTGATTGTGAAAATTCA+TGG - Chr8:26234665-26234684 MsG0880043532.01.T01:intron 30.0%
TTTAGCATCTATAGAAGTTG+AGG - Chr8:26235151-26235170 MsG0880043532.01.T01:CDS 30.0%
TTTGGTTGAACTGTTATAGT+TGG + Chr8:26234107-26234126 None:intergenic 30.0%
! AAATTTCATTTAGAGCCAGA+AGG + Chr8:26238164-26238183 None:intergenic 30.0%
! AAGTATGATCGAGTTGTTAT+AGG - Chr8:26236675-26236694 MsG0880043532.01.T01:intron 30.0%
! AATGCTTCATTTTGCTTCTT+AGG - Chr8:26238001-26238020 MsG0880043532.01.T01:intron 30.0%
! AGACGAGTTGTACTAAATTT+TGG - Chr8:26234065-26234084 MsG0880043532.01.T01:three_prime_UTR 30.0%
! ATGAATTTTCACAATCAGGA+AGG + Chr8:26234666-26234685 None:intergenic 30.0%
! ATGCTTCATTTTGCTTCTTA+GGG - Chr8:26238002-26238021 MsG0880043532.01.T01:intron 30.0%
! CAAAATGAAGCATTCTTAGA+TGG + Chr8:26237995-26238014 None:intergenic 30.0%
! CTTTATTTGATACCTATGCT+TGG + Chr8:26233981-26234000 None:intergenic 30.0%
! GAGTGATTTTTATGTACTCT+TGG - Chr8:26236006-26236025 MsG0880043532.01.T01:intron 30.0%
! TGAATTTTCACAATCAGGAA+GGG + Chr8:26234665-26234684 None:intergenic 30.0%
! TTTTGAACTGTCCTATAAAG+TGG - Chr8:26234035-26234054 MsG0880043532.01.T01:three_prime_UTR 30.0%
!! AAACTAGGTACTGATATTGA+TGG - Chr8:26233861-26233880 MsG0880043532.01.T01:three_prime_UTR 30.0%
!! AACTGTATTTGGAATGCTTT+TGG - Chr8:26235083-26235102 MsG0880043532.01.T01:intron 30.0%
!! ACAGCTTTAAATACCAAAGT+AGG + Chr8:26235284-26235303 None:intergenic 30.0%
!! ACTCCCTTTTAAAAAGAAGA+GGG + Chr8:26234165-26234184 None:intergenic 30.0%
!! ATTATTTTCAGCTTTTGGAG+AGG - Chr8:26237047-26237066 MsG0880043532.01.T01:intron 30.0%
!! TACTCCCTTTTAAAAAGAAG+AGG + Chr8:26234166-26234185 None:intergenic 30.0%
!! TTTCACTTTGACTTGTGAAT+TGG - Chr8:26238269-26238288 MsG0880043532.01.T01:intron 30.0%
!!! ATGCTGTTTTCTTTTATCTC+AGG - Chr8:26237692-26237711 MsG0880043532.01.T01:intron 30.0%
!!! CTCTTTTTCAGGCAATTTAT+GGG - Chr8:26234132-26234151 MsG0880043532.01.T01:three_prime_UTR 30.0%
AAGAGAACAGAAGCTGATAT+CGG - Chr8:26235339-26235358 MsG0880043532.01.T01:intron 35.0%
AAGAGCTTGGAAAGGATATT+CGG - Chr8:26237115-26237134 MsG0880043532.01.T01:intron 35.0%
AATTAACTATTGGGTTCCCT+TGG + Chr8:26234782-26234801 None:intergenic 35.0%
AATTTCTGCATACGAACTTG+AGG + Chr8:26235191-26235210 None:intergenic 35.0%
ACTATTTGCATCATAGCAGT+AGG - Chr8:26234828-26234847 MsG0880043532.01.T01:intron 35.0%
AGCATTCCAAATACAGTTGT+AGG + Chr8:26235081-26235100 None:intergenic 35.0%
ATAACCGATTGTATGTAGCA+TGG + Chr8:26237073-26237092 None:intergenic 35.0%
ATACCTACAGGTAAAACAGT+AGG + Chr8:26235309-26235328 None:intergenic 35.0%
ATCTAGGTAATCTTGTAGCT+AGG + Chr8:26234593-26234612 None:intergenic 35.0%
ATTAACTATTGGGTTCCCTT+GGG + Chr8:26234781-26234800 None:intergenic 35.0%
ATTACATTTAGGCTCAGGTT+GGG - Chr8:26236569-26236588 MsG0880043532.01.T01:intron 35.0%
ATTTATGTGACGATGACAAG+AGG - Chr8:26234611-26234630 MsG0880043532.01.T01:intron 35.0%
CAAAATTCAAGGAGTGGAAA+AGG + Chr8:26237015-26237034 None:intergenic 35.0%
CAAAGTAGGAAACATTACAG+TGG + Chr8:26235270-26235289 None:intergenic 35.0%
CACTGTAATGTTTCCTACTT+TGG - Chr8:26235268-26235287 MsG0880043532.01.T01:intron 35.0%
CAGATGACTTATCCGAAAAT+TGG - Chr8:26234557-26234576 MsG0880043532.01.T01:intron 35.0%
CATCAACAAATGGTTGCAAA+CGG + Chr8:26235375-26235394 None:intergenic 35.0%
CCATAAATTGCCTGAAAAAG+AGG + Chr8:26234134-26234153 None:intergenic 35.0%
CGAAAGCAAAGAATAAGTGA+CGG - Chr8:26236730-26236749 MsG0880043532.01.T01:intron 35.0%
CTACAGAGAAAAAGCTGATA+AGG + Chr8:26234417-26234436 None:intergenic 35.0%
CTAGAAACTTACATGCAGAA+TGG + Chr8:26238305-26238324 None:intergenic 35.0%
CTTATGGCCAATTAAACACA+CGG + Chr8:26235585-26235604 None:intergenic 35.0%
GAAAGCTCTTGAAGATAAGA+AGG - Chr8:26237383-26237402 MsG0880043532.01.T01:intron 35.0%
GATGCATCATAACAAAGTTC+AGG + Chr8:26235699-26235718 None:intergenic 35.0%
GCATTCCAAATACAGTTGTA+GGG + Chr8:26235080-26235099 None:intergenic 35.0%
GCCCAATGAAATAGGAATTT+AGG + Chr8:26238384-26238403 None:intergenic 35.0%
GGATATCAACAAAACGTAAC+AGG + Chr8:26237974-26237993 None:intergenic 35.0%
GTGCAGACCAATTATATAGA+AGG - Chr8:26236132-26236151 MsG0880043532.01.T01:intron 35.0%
TAATCCAACTACTGATAGAC+AGG + Chr8:26235902-26235921 None:intergenic 35.0%
TAGAACTTAACTGCTTCTGT+AGG - Chr8:26237285-26237304 MsG0880043532.01.T01:intron 35.0%
TAGCTATGTTATGTAGACCA+AGG - Chr8:26234354-26234373 MsG0880043532.01.T01:intron 35.0%
TATGTTATGTAGACCAAGGT+CGG - Chr8:26234358-26234377 MsG0880043532.01.T01:intron 35.0%
TATTACATTTAGGCTCAGGT+TGG - Chr8:26236568-26236587 MsG0880043532.01.T01:intron 35.0%
TGGGTTTCATGATCTATTCT+TGG + Chr8:26235981-26236000 None:intergenic 35.0%
TGTAAGAGAATGTCTGAGTT+TGG - Chr8:26235013-26235032 MsG0880043532.01.T01:intron 35.0%
TGTCATCGTCACATAAATCT+AGG + Chr8:26234609-26234628 None:intergenic 35.0%
TTTATGTGACGATGACAAGA+GGG - Chr8:26234612-26234631 MsG0880043532.01.T01:intron 35.0%
! AATACAATTGGTAACACCAG+AGG + Chr8:26234920-26234939 None:intergenic 35.0%
! ACCAAAATGACCTCTTTTTC+AGG - Chr8:26234121-26234140 MsG0880043532.01.T01:three_prime_UTR 35.0%
! ATCCCCCTCTTCTTTTTAAA+AGG - Chr8:26234158-26234177 MsG0880043532.01.T01:three_prime_UTR 35.0%
! CAATTTTCGGATAAGTCATC+TGG + Chr8:26234559-26234578 None:intergenic 35.0%
! CTTTTATCTCAGGAAGCTTA+CGG - Chr8:26237702-26237721 MsG0880043532.01.T01:intron 35.0%
! TACTGTTTTACCTGTAGGTA+TGG - Chr8:26235308-26235327 MsG0880043532.01.T01:intron 35.0%
! TCTATATAATTGGTCTGCAC+CGG + Chr8:26236132-26236151 None:intergenic 35.0%
! TGCCATGAATTTTCACAATC+AGG + Chr8:26234670-26234689 None:intergenic 35.0%
! TTGAAATGTTTTCCCAGAGT+TGG - Chr8:26237247-26237266 MsG0880043532.01.T01:intron 35.0%
! TTTCCTACTGTTTTACCTGT+AGG - Chr8:26235303-26235322 MsG0880043532.01.T01:intron 35.0%
! TTTGCTTTCGTCTTCCATTT+TGG + Chr8:26236720-26236739 None:intergenic 35.0%
!! CATATTTTGAGTCCTACTGA+CGG - Chr8:26235832-26235851 MsG0880043532.01.T01:intron 35.0%
!! CTCCCTTTTAAAAAGAAGAG+GGG + Chr8:26234164-26234183 None:intergenic 35.0%
!! GTTAGAGGGGTTCATTTTTA+TGG - Chr8:26234856-26234875 MsG0880043532.01.T01:CDS 35.0%
!! GTTGGTAAATTGTCAGGTTT+TGG - Chr8:26234803-26234822 MsG0880043532.01.T01:intron 35.0%
!! TCCCCCTCTTCTTTTTAAAA+GGG - Chr8:26234159-26234178 MsG0880043532.01.T01:three_prime_UTR 35.0%
!! TCCCTTTTAAAAAGAAGAGG+GGG + Chr8:26234163-26234182 None:intergenic 35.0%
!! TTGAGTTGATCATGTTCTTG+TGG - Chr8:26238138-26238157 MsG0880043532.01.T01:intron 35.0%
!!! CCTCTTTTTCAGGCAATTTA+TGG - Chr8:26234131-26234150 MsG0880043532.01.T01:three_prime_UTR 35.0%
!!! TTTTTCAAGTAGGCTATACG+AGG + Chr8:26237565-26237584 None:intergenic 35.0%
!!! TTTTTCAGGCAATTTATGGG+TGG - Chr8:26234135-26234154 MsG0880043532.01.T01:three_prime_UTR 35.0%
AACCACTAAACCATAACTCG+TGG - Chr8:26236041-26236060 MsG0880043532.01.T01:intron 40.0%
AAGCAGAGTTGTTGGTCAAA+TGG - Chr8:26234635-26234654 MsG0880043532.01.T01:intron 40.0%
AAGTCCTGTCTATCAGTAGT+TGG - Chr8:26235895-26235914 MsG0880043532.01.T01:intron 40.0%
ACATTGGATACACTCTACTG+CGG + Chr8:26234482-26234501 None:intergenic 40.0%
AGAAGTTGAGGAAGATTCAC+CGG - Chr8:26235163-26235182 MsG0880043532.01.T01:CDS 40.0%
AGACATGTCTCAACCTATTC+AGG + Chr8:26234005-26234024 None:intergenic 40.0%
AGCTGATAAGGGCCATAAAA+TGG + Chr8:26234405-26234424 None:intergenic 40.0%
AGGAATTCTAGTCATGTACC+TGG + Chr8:26234326-26234345 None:intergenic 40.0%
AGTCAAGAGTCAAATTCCTC+TGG - Chr8:26234901-26234920 MsG0880043532.01.T01:CDS 40.0%
ATGGACCCTACAACTGTATT+TGG - Chr8:26235072-26235091 MsG0880043532.01.T01:intron 40.0%
ATTCCTATTTCATTGGGCAG+AGG - Chr8:26238386-26238405 MsG0880043532.01.T01:intron 40.0%
ATTGGAGGTTTCCATACACA+AGG - Chr8:26235624-26235643 MsG0880043532.01.T01:intron 40.0%
ATTTGCATCATAGCAGTAGG+TGG - Chr8:26234831-26234850 MsG0880043532.01.T01:intron 40.0%
CAAAGGCAGACATGAAACAT+TGG + Chr8:26234498-26234517 None:intergenic 40.0%
CAATGTTTCATGTCTGCCTT+TGG - Chr8:26234496-26234515 MsG0880043532.01.T01:intron 40.0%
CCGTATAAAGTCACAAGTGA+CGG - Chr8:26237185-26237204 MsG0880043532.01.T01:CDS 40.0%
CCGTCACTTGTGACTTTATA+CGG + Chr8:26237188-26237207 None:intergenic 40.0%
CTCAAACAGATACCAAGCAT+AGG - Chr8:26233966-26233985 MsG0880043532.01.T01:three_prime_UTR 40.0%
GAGCTCAAGAAGCTAAATCA+AGG - Chr8:26237336-26237355 MsG0880043532.01.T01:intron 40.0%
GCTCGTAATCTTTCAAAAGC+TGG - Chr8:26235433-26235452 MsG0880043532.01.T01:intron 40.0%
GCTCTGACCAAAATTGACTA+AGG + Chr8:26233899-26233918 None:intergenic 40.0%
GCTTGGTATCTGTTTGAGAA+TGG + Chr8:26233964-26233983 None:intergenic 40.0%
GGACTATCGTGATATGGATT+GGG + Chr8:26236379-26236398 None:intergenic 40.0%
GTGCAACCACATGATACAAA+CGG + Chr8:26237935-26237954 None:intergenic 40.0%
GTTATGTTGTCCACGAGTTA+TGG + Chr8:26236054-26236073 None:intergenic 40.0%
TAATCTTGTAGCTAGGTCTG+TGG + Chr8:26234586-26234605 None:intergenic 40.0%
TATCCTCTGCCCAATGAAAT+AGG + Chr8:26238392-26238411 None:intergenic 40.0%
TCCCAACTGTTTCAATGCTT+TGG + Chr8:26237858-26237877 None:intergenic 40.0%
TCTCTTACATGCTGTTAGAC+TGG + Chr8:26235002-26235021 None:intergenic 40.0%
TGATAAGGGCCATAAAATGG+TGG + Chr8:26234402-26234421 None:intergenic 40.0%
TGATTGGGACTATCGTGATA+TGG + Chr8:26236385-26236404 None:intergenic 40.0%
TGGCATGAACCATGAATTCA+AGG + Chr8:26237636-26237655 None:intergenic 40.0%
TTAGTACAACTCGTCTAGAG+AGG + Chr8:26234061-26234080 None:intergenic 40.0%
TTATACGGTGTCCTTTGTCT+CGG + Chr8:26237173-26237192 None:intergenic 40.0%
TTCGGATAAGTCATCTGGTA+GGG + Chr8:26234554-26234573 None:intergenic 40.0%
TTGCCAACCGTGTGTTTAAT+TGG - Chr8:26235575-26235594 MsG0880043532.01.T01:intron 40.0%
TTGGAGGTTTCCATACACAA+GGG - Chr8:26235625-26235644 MsG0880043532.01.T01:intron 40.0%
TTGGGCTTCCACTTTATTAG+AGG + Chr8:26236431-26236450 None:intergenic 40.0%
TTTCGGATAAGTCATCTGGT+AGG + Chr8:26234555-26234574 None:intergenic 40.0%
TTTCTTTCTGCCATACCTAC+AGG + Chr8:26235321-26235340 None:intergenic 40.0%
TTTGCATCATAGCAGTAGGT+GGG - Chr8:26234832-26234851 MsG0880043532.01.T01:CDS 40.0%
! AAGCATGTGCGTTTTACACA+AGG + Chr8:26234732-26234751 None:intergenic 40.0%
! CGTTTGCAACCATTTGTTGA+TGG - Chr8:26235373-26235392 MsG0880043532.01.T01:intron 40.0%
! CTTGTTCAGTTTGCTCAGTA+TGG - Chr8:26238108-26238127 MsG0880043532.01.T01:intron 40.0%
! GATACATACACTAGTCTGCT+TGG + Chr8:26236879-26236898 None:intergenic 40.0%
! GCCATAAGTGAGACCTTTTT+GGG - Chr8:26235597-26235616 MsG0880043532.01.T01:intron 40.0%
! GCCTGAAAAAGAGGTCATTT+TGG + Chr8:26234125-26234144 None:intergenic 40.0%
! GTTGTACATTTTCCGTCAGT+AGG + Chr8:26235847-26235866 None:intergenic 40.0%
! TGGACATTTTGCAAGGAAGT+AGG - Chr8:26234876-26234895 MsG0880043532.01.T01:CDS 40.0%
!! AAACGCACATGCTTTAGAGA+AGG - Chr8:26234738-26234757 MsG0880043532.01.T01:intron 40.0%
!! AACGCACATGCTTTAGAGAA+GGG - Chr8:26234739-26234758 MsG0880043532.01.T01:intron 40.0%
!! ATGTTTTCCCAGAGTTGGTT+TGG - Chr8:26237252-26237271 MsG0880043532.01.T01:intron 40.0%
!! CTTACATGCAGAATGGACTA+TGG + Chr8:26238298-26238317 None:intergenic 40.0%
!! GCCAAAGCATTGAAACAGTT+GGG - Chr8:26237854-26237873 MsG0880043532.01.T01:intron 40.0%
!! TTTTGCTTCTTAGGGTGCTA+AGG - Chr8:26238010-26238029 MsG0880043532.01.T01:intron 40.0%
ACCAAAACAGCCTTCTCCAA+AGG + Chr8:26234515-26234534 None:intergenic 45.0%
ACCTCCAATAGTGCCCAAAA+AGG + Chr8:26235613-26235632 None:intergenic 45.0%
ACGGAGGACCTCTAATAAAG+TGG - Chr8:26236420-26236439 MsG0880043532.01.T01:intron 45.0%
AGAACCTACCAAACCAACTC+TGG + Chr8:26237263-26237282 None:intergenic 45.0%
AGAAGGGTTGCTGAATTAGC+AGG - Chr8:26234755-26234774 MsG0880043532.01.T01:intron 45.0%
AGCAGCAAAAGAGCTTGGAA+AGG - Chr8:26237107-26237126 MsG0880043532.01.T01:intron 45.0%
ATAAGTCATCTGGTAGGGAC+TGG + Chr8:26234549-26234568 None:intergenic 45.0%
ATCATGTTCTTGTGGCCTTC+TGG - Chr8:26238146-26238165 MsG0880043532.01.T01:intron 45.0%
ATTGGATACACTCTACTGCG+GGG + Chr8:26234480-26234499 None:intergenic 45.0%
CATTGGATACACTCTACTGC+GGG + Chr8:26234481-26234500 None:intergenic 45.0%
CGAAAAGCAGCAAAAGAGCT+TGG - Chr8:26237102-26237121 MsG0880043532.01.T01:intron 45.0%
GAACCTACCAAACCAACTCT+GGG + Chr8:26237262-26237281 None:intergenic 45.0%
GAGGCCATGCTACATACAAT+CGG - Chr8:26237066-26237085 MsG0880043532.01.T01:intron 45.0%
GCAGAGGATATGTAGATGGA+TGG - Chr8:26238402-26238421 MsG0880043532.01.T01:CDS 45.0%
GCCCAAAAAGGTCTCACTTA+TGG + Chr8:26235601-26235620 None:intergenic 45.0%
GGGACTATCGTGATATGGAT+TGG + Chr8:26236380-26236399 None:intergenic 45.0%
GGTCGCAAACGACTTAAACT+AGG - Chr8:26233846-26233865 MsG0880043532.01.T01:three_prime_UTR 45.0%
GTAGATGGATGGACATTCTG+TGG - Chr8:26238413-26238432 MsG0880043532.01.T01:CDS 45.0%
GTCAGAGCTCTTTGAGCAAA+CGG - Chr8:26233911-26233930 MsG0880043532.01.T01:three_prime_UTR 45.0%
GTCCACGAGTTATGGTTTAG+TGG + Chr8:26236046-26236065 None:intergenic 45.0%
GTGCATCCGTTTGTATCATG+TGG - Chr8:26237926-26237945 MsG0880043532.01.T01:intron 45.0%
GTTTATGAACGTCCCCTTCT+TGG - Chr8:26237137-26237156 MsG0880043532.01.T01:CDS 45.0%
TAAGTCATCTGGTAGGGACT+GGG + Chr8:26234548-26234567 None:intergenic 45.0%
TACAGTTGTAGGGTCCATCA+TGG + Chr8:26235070-26235089 None:intergenic 45.0%
TCACAAGAAGAGAAGAGAGG+TGG - Chr8:26234296-26234315 MsG0880043532.01.T01:intron 45.0%
TCAGAGCTCTTTGAGCAAAC+GGG - Chr8:26233912-26233931 MsG0880043532.01.T01:three_prime_UTR 45.0%
TCTTCTCGGCCATCAACAAA+TGG + Chr8:26235385-26235404 None:intergenic 45.0%
TGGATGGACATTCTGTGGAT+TGG - Chr8:26238418-26238437 MsG0880043532.01.T01:CDS 45.0%
TGGCCAATTAAACACACGGT+TGG + Chr8:26235581-26235600 None:intergenic 45.0%
TGTCTTTCAGCCCTTGTGTA+TGG + Chr8:26235638-26235657 None:intergenic 45.0%
TTGGGCAGAGGATATGTAGA+TGG - Chr8:26238398-26238417 MsG0880043532.01.T01:intron 45.0%
! AAGTTGGCGCCACCATTTTA+TGG - Chr8:26234390-26234409 MsG0880043532.01.T01:intron 45.0%
! ACATACACTAGTCTGCTTGG+AGG + Chr8:26236876-26236895 None:intergenic 45.0%
! ATACACTAGTCTGCTTGGAG+GGG + Chr8:26236874-26236893 None:intergenic 45.0%
! CATACACTAGTCTGCTTGGA+GGG + Chr8:26236875-26236894 None:intergenic 45.0%
! GGCCATAAGTGAGACCTTTT+TGG - Chr8:26235596-26235615 MsG0880043532.01.T01:intron 45.0%
! GGTCTGTGGTTCCCAATTTT+CGG + Chr8:26234572-26234591 None:intergenic 45.0%
! GTCTAGAGAGGCCACTTTAT+AGG + Chr8:26234049-26234068 None:intergenic 45.0%
! GTTGGGAGGTGAATTTTGGA+GGG - Chr8:26236586-26236605 MsG0880043532.01.T01:intron 45.0%
! GTTTTCCAGAGATGCCATGA+TGG - Chr8:26235053-26235072 MsG0880043532.01.T01:intron 45.0%
! TTCATGTCTGCCTTTGGAGA+AGG - Chr8:26234502-26234521 MsG0880043532.01.T01:intron 45.0%
!! ACCTTTTTGGGCACTATTGG+AGG - Chr8:26235609-26235628 MsG0880043532.01.T01:intron 45.0%
!! AGGGTGCTAAGGATGCTTTT+AGG - Chr8:26238021-26238040 MsG0880043532.01.T01:intron 45.0%
!! AGGTGAATTTTGGAGGGAAG+GGG - Chr8:26236592-26236611 MsG0880043532.01.T01:intron 45.0%
!! GAGACCTTTTTGGGCACTAT+TGG - Chr8:26235606-26235625 MsG0880043532.01.T01:intron 45.0%
!! GAGGTGAATTTTGGAGGGAA+GGG - Chr8:26236591-26236610 MsG0880043532.01.T01:intron 45.0%
!! GGCCAAAGCATTGAAACAGT+TGG - Chr8:26237853-26237872 MsG0880043532.01.T01:intron 45.0%
!! TTTCCCAGAGTTGGTTTGGT+AGG - Chr8:26237256-26237275 MsG0880043532.01.T01:intron 45.0%
!!! CCACCTGCTTGTCATTTTCT+CGG + Chr8:26238064-26238083 None:intergenic 45.0%
!!! TCAGGTTGGGAGGTGAATTT+TGG - Chr8:26236582-26236601 MsG0880043532.01.T01:intron 45.0%
AAGTCATCTGGTAGGGACTG+GGG + Chr8:26234547-26234566 None:intergenic 50.0%
AATGACAAGCAGGTGGAAGC+TGG - Chr8:26238068-26238087 MsG0880043532.01.T01:intron 50.0%
ACGCCGAGAAAATGACAAGC+AGG - Chr8:26238058-26238077 MsG0880043532.01.T01:intron 50.0%
ACTTCTCATTCCTCCGACCT+TGG + Chr8:26234374-26234393 None:intergenic 50.0%
AGCAGTAGGTGGGAGTTAGA+GGG - Chr8:26234842-26234861 MsG0880043532.01.T01:CDS 50.0%
AGGTCGGAGGAATGAGAAGT+TGG - Chr8:26234374-26234393 MsG0880043532.01.T01:intron 50.0%
CAAGAGGGAAGCAGAGTTGT+TGG - Chr8:26234627-26234646 MsG0880043532.01.T01:intron 50.0%
CCGAGAAAATGACAAGCAGG+TGG - Chr8:26238061-26238080 MsG0880043532.01.T01:intron 50.0%
GAGAAGAGAGGTGGAATTCC+AGG - Chr8:26234305-26234324 MsG0880043532.01.T01:intron 50.0%
GCTAAGATCGCGTGAAGAGT+AGG - Chr8:26234272-26234291 MsG0880043532.01.T01:intron 50.0%
GGCTCACAAGAAGAGAAGAG+AGG - Chr8:26234293-26234312 MsG0880043532.01.T01:intron 50.0%
GTTATGTAGACCAAGGTCGG+AGG - Chr8:26234361-26234380 MsG0880043532.01.T01:intron 50.0%
TAGCAGTAGGTGGGAGTTAG+AGG - Chr8:26234841-26234860 MsG0880043532.01.T01:CDS 50.0%
TCAAGGAGTGGAAAAGGACC+AGG + Chr8:26237009-26237028 None:intergenic 50.0%
TCAGGAAGCTTACGGTGAAC+CGG - Chr8:26237710-26237729 MsG0880043532.01.T01:intron 50.0%
TGCATACGAACTTGAGGCTC+CGG + Chr8:26235185-26235204 None:intergenic 50.0%
TGCTGAATTAGCAGGCCCAA+GGG - Chr8:26234763-26234782 MsG0880043532.01.T01:intron 50.0%
TTGCTGAATTAGCAGGCCCA+AGG - Chr8:26234762-26234781 MsG0880043532.01.T01:intron 50.0%
! GGTTGGGAGGTGAATTTTGG+AGG - Chr8:26236585-26236604 MsG0880043532.01.T01:intron 50.0%
! TACACTAGTCTGCTTGGAGG+GGG + Chr8:26236873-26236892 None:intergenic 50.0%
!! ACATTTAGGCTCAGGTTGGG+AGG - Chr8:26236572-26236591 MsG0880043532.01.T01:intron 50.0%
!! GCCTTTGGAGAAGGCTGTTT+TGG - Chr8:26234511-26234530 MsG0880043532.01.T01:intron 50.0%
!! GGAGGTGAATTTTGGAGGGA+AGG - Chr8:26236590-26236609 MsG0880043532.01.T01:intron 50.0%
AGGGTCCATCATGGCATCTC+TGG + Chr8:26235061-26235080 None:intergenic 55.0%
GCAGTAGGTGGGAGTTAGAG+GGG - Chr8:26234843-26234862 MsG0880043532.01.T01:CDS 55.0%
TCACAAGTGACGGCAGCTTC+AGG - Chr8:26237195-26237214 MsG0880043532.01.T01:CDS 55.0%
TCCTTTGTCTCGGACCCACT+CGG + Chr8:26237163-26237182 None:intergenic 55.0%
! ACACTAGTCTGCTTGGAGGG+GGG + Chr8:26236872-26236891 None:intergenic 55.0%
GCTTGGAGGGGGGATTTGGA+GGG + Chr8:26236862-26236881 None:intergenic 60.0%
GGATACACTCTACTGCGGGG+TGG + Chr8:26234477-26234496 None:intergenic 60.0%
GTCTGCTTGGAGGGGGGATT+TGG + Chr8:26236866-26236885 None:intergenic 60.0%
TGCTTGGAGGGGGGATTTGG+AGG + Chr8:26236863-26236882 None:intergenic 60.0%
ACGTCCCCTTCTTGGCCGAG+TGG - Chr8:26237145-26237164 MsG0880043532.01.T01:CDS 65.0%
CGGACCCACTCGGCCAAGAA+GGG + Chr8:26237153-26237172 None:intergenic 65.0%
CGTCCCCTTCTTGGCCGAGT+GGG - Chr8:26237146-26237165 MsG0880043532.01.T01:CDS 65.0%
GCCGAGTGGGTCCGAGACAA+AGG - Chr8:26237159-26237178 MsG0880043532.01.T01:CDS 65.0%
GGACCCACTCGGCCAAGAAG+GGG + Chr8:26237152-26237171 None:intergenic 65.0%
TCGGACCCACTCGGCCAAGA+AGG + Chr8:26237154-26237173 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 26233834 26238477 26233834 ID=MsG0880043532.01;Name=MsG0880043532.01
Chr8 mRNA 26233834 26238477 26233834 ID=MsG0880043532.01.T01;Parent=MsG0880043532.01;Name=MsG0880043532.01.T01;_AED=0.49;_eAED=0.55;_QI=0|0.57|0.62|1|0.85|0.87|8|374|301
Chr8 exon 26233834 26234288 26233834 ID=MsG0880043532.01.T01:exon:1428;Parent=MsG0880043532.01.T01
Chr8 exon 26234422 26234502 26234422 ID=MsG0880043532.01.T01:exon:1427;Parent=MsG0880043532.01.T01
Chr8 exon 26234832 26235004 26234832 ID=MsG0880043532.01.T01:exon:1426;Parent=MsG0880043532.01.T01
Chr8 exon 26235095 26235253 26235095 ID=MsG0880043532.01.T01:exon:1425;Parent=MsG0880043532.01.T01
Chr8 exon 26236857 26236986 26236857 ID=MsG0880043532.01.T01:exon:1424;Parent=MsG0880043532.01.T01
Chr8 exon 26237118 26237249 26237118 ID=MsG0880043532.01.T01:exon:1423;Parent=MsG0880043532.01.T01
Chr8 exon 26237389 26237461 26237389 ID=MsG0880043532.01.T01:exon:1422;Parent=MsG0880043532.01.T01
Chr8 exon 26238401 26238477 26238401 ID=MsG0880043532.01.T01:exon:1421;Parent=MsG0880043532.01.T01
Chr8 CDS 26238401 26238477 26238401 ID=MsG0880043532.01.T01:cds;Parent=MsG0880043532.01.T01
Chr8 CDS 26237389 26237461 26237389 ID=MsG0880043532.01.T01:cds;Parent=MsG0880043532.01.T01
Chr8 CDS 26237118 26237249 26237118 ID=MsG0880043532.01.T01:cds;Parent=MsG0880043532.01.T01
Chr8 CDS 26236857 26236986 26236857 ID=MsG0880043532.01.T01:cds;Parent=MsG0880043532.01.T01
Chr8 CDS 26235095 26235253 26235095 ID=MsG0880043532.01.T01:cds;Parent=MsG0880043532.01.T01
Chr8 CDS 26234832 26235004 26234832 ID=MsG0880043532.01.T01:cds;Parent=MsG0880043532.01.T01
Chr8 CDS 26234422 26234502 26234422 ID=MsG0880043532.01.T01:cds;Parent=MsG0880043532.01.T01
Chr8 CDS 26234208 26234288 26234208 ID=MsG0880043532.01.T01:cds;Parent=MsG0880043532.01.T01
Chr8 three_prime_UTR 26233834 26234207 26233834 ID=MsG0880043532.01.T01:three_prime_utr;Parent=MsG0880043532.01.T01
Gene Sequence

>MsG0880043532.01.T01

ATGGGTAAATTTGGTCGCAAACGACTTAAACTAGGTACTGATATTGATGGAGACCAAATTTTCCTTAGTCAATTTTGGTGGGAGTTAGAGGGGTTCATTTTTATGGACATTTTGCAAGGAAGTAGGAGAGTCAAGAGTCAAATTCCTCTGAGATGCCATGATGGACCCTACAACTGTATTTGGAATGCTTTTGGAAGTGAATTTTTCGAAGAGTATATTGGAATACTTGCACTTGCTTCTTTAGCATCTATAGAAGTTGAGGAAGATTCACCGGAGCCTCAAGTATGGCAGAAAGAAAGAGAACAGAAGCTGATATCGGTTTTGAAAGACCGTTTGCAACCATTTGTTGATGGCCGAGAAGAAGAATTTACAAAATGGGCAAATTCTGAAGCTCGTAATCTTTCAAAAGCTGCTTTTGGAGAGGCCATGCTACATACAATCGGTTATATCTACACACGAAAAGCAGCAAAAGAGCTTGGAAAGGATATTCGGTTTATGAACGTCCCCTTCTTGGCCGAGTGGGTCCGAGACAAAGGACACCGTATAAAGTCACAAGTGACGGCAGCTTCAGGAGCTGTGTCTCTAATTCAAATACAAGAAGAGCTCAAGAAGCTAAATCAAGGAGAAAATAAAGAAGAAAACATAATGAAAGCTCTTGAAGATAAGAAGGATGCCATGATTAATTCCTTATGGAAGATTAATGTCATTGATATTGAATCAACTTTGTCACATGTTTGTCAAGCAGTTCTTAAAGATCCAAGTGTGTCCAAAGACGTTCTGGTGTCTCGGGCCAAAGCATTGAAACAGTTGGGAACGATCTTTCAAGGTGCTAAGGATGCTTTTAGGAGAGAAAACAGTCTACGCCGAGAAAATGACAAGCAGGTGGAAGCTGGTTCCTCATCATAA

Protein sequence

>MsG0880043532.01.T01

MGKFGRKRLKLGTDIDGDQIFLSQFWWELEGFIFMDILQGSRRVKSQIPLRCHDGPYNCIWNAFGSEFFEEYIGILALASLASIEVEEDSPEPQVWQKEREQKLISVLKDRLQPFVDGREEEFTKWANSEARNLSKAAFGEAMLHTIGYIYTRKAAKELGKDIRFMNVPFLAEWVRDKGHRIKSQVTAASGAVSLIQIQEELKKLNQGENKEENIMKALEDKKDAMINSLWKINVIDIESTLSHVCQAVLKDPSVSKDVLVSRAKALKQLGTIFQGAKDAFRRENSLRRENDKQVEAGSSS*